Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002245

Physical Location & Seq

Genomic Coordinates Reverse (-)

18523253 .. 18526309

Gene Structure 3057 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00178900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGGAGGTTGGAACTTCATTCATTTCACAGGCTTCATACTTGCGTATGTTCTCCTTTTGTCTGAAACCTGCCTGGCTAGTGTTCGATATTTTGGGAAAATTAGTCCCGGGTTTCAAGGAGCTCGGCAGGAGGATTGGATTGATAATGATGGGTTGTTTCTCTTGTCGAACTCAGCTGAATTTGGTTTTGGCTTCTACCCTACTCCCCAGGATGTCACATTGTTTCTGCTAGTTGTGATTCACATGGACACTTATGCAGTAGTCTGGGCTGCAACTAGGGGTTCCCCAGTTTCAAATACTGATAAGTTTGGGTTTGATGAGAAGGGTAGTGTGTCTTTGCAAAAAAGTGGAAGTGTGGTTTGGTCTATAGATACTGGTGGCAAAACAGTTACTACAATGGAATTGCGGGACTCAGGAAATTCGGTTTTGCGTGGTGATGACAATGGAGTAGTTTGGCAGAGTTTTAGTCATCCAACTAATACCCTGTTGTGGAACCAGGATTTTCAAGAAGGAATGAAACTTGTGAGCGATCCAAGCTCCAACAACGTGAGCTATATTCTCGAAATCAAGTTTGGTGACATGATTCTTTCTTCAGGTTTCCAAACTCCACAGCCTTATTGGTCTTTGGGGAACGAAAGCCGTAAAGCAATCAACAAAGAAGGCGGGGAAGTCACTTCAGCATCTATTAGTGCAAATTCTTGGAAGTTCTATGATCAAAGGAAAGTGCTATTTCGGCAGTTTATTTTCTCGGACAATGCTGCTGCAAATGCCTCATGGATTGCAGTTTTGGGAAATGATGGAGTTATTTCTTTCTTCAAACTTCAGAATGGAGGTCCAAGTGGTCCTTCTCCTTCCACAACAAAAATACCTGGCGGAGACTCATGCCGCACCCCGGAAGCTTGTGCTCCATATTTAGAATGTTCGAGTGACAACTACTGCCAGTGCCCTTCAGGTCTTAGCTCCCGTTCTAATTGTACGACGGGGATTGTCTCTTCATGTGATCCTTCAGAGGGTTCCATAGAGCTTGTAAATGTTGGTGATGGGCTCTATTATATTCCGCTGGGATTTGTTTCACCCTCTTCGAAAACTGATTTGGATGGTTGCCAAAAATCTTGCATCGGCAACTGTTCATGTGTTGCTTTGTTCTTCCAAAACAGTACAAGAAATTGTTATCTGTTAGACAGGATAGGTAGCTTCGAGAAGGGCTCTGGGTTTGCTTCTTACGTTAAGGTCCTTGGTAATGGAGCTGGCAGCAGTGGGGGAAGTCGAAGCAGAAGCAAGAAATGGTTCCCTTACATTATAATTGCAGCTATTTCAATAATACTTGTTATCTGTGGCTTACTTTATGTGGGATACAATCACTACATGAAGAGAAACTCACCAGGATCTCTTGAAGCAACTTCAGAAGAGAATAGTATCTACGAAAATATGGCTGGTATGCCCGTCCGTTTCAGTTACATGAATCTACAAACTGCAACGAATAACTTCTCAAAGAAGCTTGGGCAAGGAGGTTTTGGATCAGTTTATGAAGGAGTTCTTCCAGATGGAACCCAACTGGCCGTGAAGAAGTTGGAAGGAATTGGTCAGGGGCAGAAAGAGTTCCGAGCTGAAGTAACCACCATTGGCAGTATCCATCATTTTCACTTGGTCCGGCTCAAAGGATTCTGTGCAGAAGGAAGCCACCGACTTCTTGCTTATGAATACATGGCAAATGGTTCCCCGGATAAATGGATTTTCAAGAAAACAAATGAAGAATGCTTATTGGATTGGGAGACAAGATTTAGTATAGCATTGGGTACAGCAAAAGGACTAGCTTATCTCCATGAAGAATGTGATTCAAAGATTATTCACTGTGACATAAAGCCTCAAAACGTGCTCCTTGACAATAATTACCATGCCAAAGTCGCAGACTTTGGTTTGGCAAAGCTAATGACCAAGGAGCAGAGCCATGTTTTCACAACACTTCGAGGAACTCGGGGTTACCTTGCACCGGAGTGGATCACAAACCGTGCTATATCGGAGAAGAGTGATGTGTATAGCTATGGAATGCTGTTGCTAGAGATTATCGGTGGGAGAAAGAACTATGACCAATCAGAAAGTTCTGAAAAATCTCAATTTCCATTATATGCCTTCAAGATGCTAAAAGAAGGCAAAATGAAGGACATTGTTGACTCCAAGCTGAAGATAGATGACGCCGACGAGAGGGTTTCTACCGCCATTATTGTTGCATTGTGGTGTATACAACAAGACATGTGTTTGAGGCCATCAATGGCCAAGATTGTCCAAATCTTTGAAGGGGTCTGTCCAGTTCCTCCGCCTCCAACTTCCTCAGCAATGATTTCTTCAACAATAACTTCCTCAGGACCAACGTGCTGCTACAGTGGTGCCTATTTTTCTGCAGAGCGTCTTTCTGGGCCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0031625 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044464 GO:0046777 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr

Protein Analysis

807

Amino Acids

88.4

Weight (kDa)

6.13

Isoelectric Point (pI)

40.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	87 - 168	4.2e-13	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	496 - 762	3e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	497 - 762	1.5e-49	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32300
fragaria_vesca	FvH4_2g29050 FvH4_2g29070
malus_domestica	MD00G1144200.v1.1 MD15G1121900.v1.1 MD15G1122800.v1.1 MD15G1125500.v1.1
prunus_persica	Prupe.1G481100_v2.0.a1
pyrus_communis	pycom15g10990 pycom15g11300
rosa_chinensis	RchiOBHm_Chr4g0385931 RchiOBHm_Chr6g0297921 RchiOBHm_Chr6g0297931
rosa_laevigata	RLG00000010199 RLG00000011550 RLG00000011551
rosa_multiflora	Rmu_co8186410.1_g000001 Rmu_sc0007302.1_g000003 Rmu_sc0007302.1_g000004 Rmu_sc0007400.1_g000011 Rmu_sc0011097.1_g000002 Rmu_sc0011097.1_g000003 Rmu_sc0011097.1_g000004 Rmu_sc0015868.1_g000001 Rmu_sc0030316.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333530 Rroxscaffold_7G00170060 Rroxscaffold_7G00178900 Rroxscaffold_7G00178910
rosa_rugosa	Rorug03G0303100 Rorug06G0276800
rosa_samantha	Rh4CG008200 Rh4DG007100 Rh6AG387500 Rh6BG395900 Rh6CG401600 Rh6CG401700 Rh6CG401800 Rh6DG388100
rosa_wichuraiana	Rw4G000320 Rw6G033760 Rw6G033810 Rw6G033820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1301
Acc36I	ACCTGC	1 cut(s)	77
AccB1I	GGYRCC	1 cut(s)	2384
AccI	GTMKAC	1 cut(s)	2239
AciI	CCGC	7 cut(s)	406, 663, 873, 886, 1058, 2214, 2315
AclWI	GGATC	5 cut(s)	524, 995, 1393, 1525, 2006
AcoI	YGGCCR	2 cut(s)	1557, 2271
AcsI	RAATTY	3 cut(s)	179, 418, 694
AcuI	CTGAAG	8 cut(s)	576, 660, 806, 933, 990, 1386, 1629, 2201
AcyI	GRCGYC	1 cut(s)	2193
AfaI	GTAC	3 cut(s)	976, 1159, 1798
AfiI	CCNNNNNNNGG	5 cut(s)	489, 892, 1010, 1990, 2202
AflIII	ACRYGT	1 cut(s)	2250
AjnI	CCWGG	5 cut(s)	72, 207, 495, 868, 1381
AleI	CACNNNNGTG	1 cut(s)	1993
Alw21I	GWGCWC	3 cut(s)	124, 907, 1878
Alw26I	GTCTC	3 cut(s)	870, 994, 1766
AlwI	GGATC	5 cut(s)	524, 995, 1393, 1525, 2006
Ama87I	CYCGRG	2 cut(s)	107, 1974
AoxI	GGCC	4 cut(s)	1557, 2261, 2271, 2414
ApeKI	GCWGC	6 cut(s)	269, 758, 761, 1251, 1307, 2373
ApoI	RAATTY	3 cut(s)	179, 418, 694
Asp700I	GAANNNNTTC	4 cut(s)	1286, 1484, 1533, 1598
AspS9I	GGNCC	6 cut(s)	833, 842, 1231, 1648, 2363, 2414
AsuC2I	CCSGG	4 cut(s)	108, 109, 893, 1721
AsuHPI	GGTGA	5 cut(s)	446, 587, 1049, 1065, 1371
AsuII	TTCGAA	1 cut(s)	1082
AvaI	CYCGRG	2 cut(s)	107, 1974
AvaII	GGWCC	5 cut(s)	833, 842, 1231, 1648, 2363
AxyI	CCTNAGG	1 cut(s)	2359
BaeGI	GKGCMC	1 cut(s)	947
BalI	TGGCCA	1 cut(s)	2273
BanI	GGYRCC	1 cut(s)	2384
BanII	GRGCYC	3 cut(s)	124, 1047, 1208
Bbv12I	GWGCWC	3 cut(s)	124, 907, 1878
BbvCI	CCTCAGC	1 cut(s)	2329
BbvI	GCAGC	6 cut(s)	256, 745, 748, 1263, 1319, 2360
BccI	CCATC	7 cut(s)	143, 791, 1034, 1091, 1538, 1641, 2272
BceAI	ACGGC	2 cut(s)	624, 1544
BciT130I	CCWGG	5 cut(s)	74, 209, 497, 870, 1383
BciVI	GTATCC	2 cut(s)	1346, 1640
BclI	TGATCA	1 cut(s)	712
BcnI	CCSGG	4 cut(s)	108, 109, 893, 1721
BcoDI	GTCTC	3 cut(s)	870, 994, 1766
BfaI	CTAG	5 cut(s)	78, 230, 276, 1811, 2057
BfmI	CTRYAG	3 cut(s)	366, 2377, 2397
BfuAI	ACCTGC	1 cut(s)	77
BfuI	GTATCC	2 cut(s)	1346, 1640
BisI	GCNGC	7 cut(s)	270, 759, 762, 886, 1252, 1308, 2374
BlsI	GCNGC	7 cut(s)	271, 760, 763, 887, 1253, 1309, 2375
Bme1390I	CCNGG	9 cut(s)	74, 108, 109, 209, 497, 870, 893, 1383, 1721
Bme18I	GGWCC	5 cut(s)	833, 842, 1231, 1648, 2363
BmeT110I	CYCGRG	2 cut(s)	107, 1974
BmgT120I	GGNCC	6 cut(s)	833, 842, 1231, 1648, 2363, 2414
BmiI	GGNNCC	7 cut(s)	283, 494, 1015, 1289, 1549, 1717, 2386
BmrFI	CCNGG	9 cut(s)	74, 108, 109, 209, 497, 870, 893, 1383, 1721
BmrI	ACTGGG	1 cut(s)	281
BmsI	GCATC	3 cut(s)	689, 1125, 2127
BmuI	ACTGGG	1 cut(s)	281
BplI	GAGNNNNNCTC	2 cut(s)	1190, 1222
Bpu10I	CCTNAGC	1 cut(s)	2329
Bpu14I	TTCGAA	1 cut(s)	1082
BpuMI	CCSGG	4 cut(s)	108, 109, 893, 1721
BsaHI	GRCGYC	1 cut(s)	2193
BsaJI	CCNNGG	6 cut(s)	107, 207, 891, 1234, 1719, 1935
BsaWI	WCCGGW	1 cut(s)	1990
Bsc4I	CCNNNNNNNGG	5 cut(s)	489, 892, 1010, 1990, 2202
Bse1I	ACTGG	5 cut(s)	287, 379, 940, 1560, 2306
Bse21I	CCTNAGG	1 cut(s)	2359
Bse3DI	GCAATG	1 cut(s)	2340
BseBI	CCWGG	5 cut(s)	74, 209, 497, 870, 1383
BseDI	CCNNGG	6 cut(s)	107, 207, 891, 1234, 1719, 1935
BseGI	GGATG	3 cut(s)	217, 469, 1102
BseLI	CCNNNNNNNGG	5 cut(s)	489, 892, 1010, 1990, 2202
BseMI	GCAATG	1 cut(s)	2340
BseMII	CTCAG	4 cut(s)	186, 426, 2343, 2373
BseNI	ACTGG	5 cut(s)	287, 379, 940, 1560, 2306
BseSI	GKGCMC	1 cut(s)	947
BseXI	GCAGC	6 cut(s)	256, 745, 748, 1263, 1319, 2360
BseYI	CCCAGC	1 cut(s)	1060
BsgI	GTGCAG	1 cut(s)	1689
BshFI	GGCC	4 cut(s)	1559, 2263, 2273, 2416
BshNI	GGYRCC	1 cut(s)	2384
BsiHKAI	GWGCWC	3 cut(s)	124, 907, 1878
BsiHKCI	CYCGRG	2 cut(s)	107, 1974
BsiSI	CCGG	5 cut(s)	108, 893, 1651, 1721, 1991
BslFI	GGGAC	2 cut(s)	90, 422
BslI	CCNNNNNNNGG	5 cut(s)	489, 892, 1010, 1990, 2202
BsmAI	GTCTC	3 cut(s)	870, 994, 1766
BsmFI	GGGAC	2 cut(s)	90, 422
BsmI	GAATGC	2 cut(s)	1760, 2052
BsnI	GGCC	4 cut(s)	1559, 2263, 2273, 2416
BsoBI	CYCGRG	2 cut(s)	107, 1974
Bsp119I	TTCGAA	1 cut(s)	1082
Bsp1286I	GDGCHC	6 cut(s)	124, 907, 947, 1047, 1208, 1878
Bsp143I	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
BspACI	CCGC	7 cut(s)	406, 663, 873, 886, 1058, 2214, 2315
BspANI	GGCC	4 cut(s)	1559, 2263, 2273, 2416
BspCNI	CTCAG	4 cut(s)	185, 425, 2342, 2372
BspLI	GGNNCC	7 cut(s)	283, 494, 1015, 1289, 1549, 1717, 2386
BspMAI	CTGCAG	1 cut(s)	2401
BspMI	ACCTGC	1 cut(s)	77
BspPI	GGATC	5 cut(s)	524, 995, 1393, 1525, 2006
BspT104I	TTCGAA	1 cut(s)	1082
BspT107I	GGYRCC	1 cut(s)	2384
BsrDI	GCAATG	1 cut(s)	2340
BsrI	ACTGG	5 cut(s)	287, 379, 940, 1560, 2306
BssECI	CCNNGG	6 cut(s)	107, 207, 891, 1234, 1719, 1935
BssMI	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
BssNAI	GTATAC	1 cut(s)	2240
BssNI	GRCGYC	1 cut(s)	2193
BssT1I	CCWWGG	2 cut(s)	1234, 1935
Bst1107I	GTATAC	1 cut(s)	2240
Bst2UI	CCWGG	5 cut(s)	74, 209, 497, 870, 1383
Bst4CI	ACNGT	6 cut(s)	388, 1127, 1157, 1853, 2009, 2381
Bst6I	CTCTTC	5 cut(s)	997, 1084, 1364, 1401, 2018
BstACI	GRCGYC	1 cut(s)	2193
BstBI	TTCGAA	1 cut(s)	1082
BstC8I	GCNNGC	1 cut(s)	1249
BstDEI	CTNAG	5 cut(s)	172, 412, 956, 2329, 2359
BstEII	GGTNACC	1 cut(s)	1979
BstF5I	GGATG	3 cut(s)	217, 469, 1102
BstKTI	GATC	6 cut(s)	532, 715, 1003, 1388, 1520, 2001
BstMAI	GTCTC	3 cut(s)	870, 994, 1766
BstMBI	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
BstMWI	GCNNNNNNNGC	4 cut(s)	534, 733, 767, 1904
BstNI	CCWGG	5 cut(s)	74, 209, 497, 870, 1383
BstNSI	RCATGY	1 cut(s)	2254
BstPI	GGTNACC	1 cut(s)	1979
BstSCI	CCNGG	9 cut(s)	72, 106, 107, 207, 495, 868, 891, 1381, 1719
BstSFI	CTRYAG	3 cut(s)	366, 2377, 2397
BstSLI	GKGCMC	1 cut(s)	947
BstV1I	GCAGC	6 cut(s)	256, 745, 748, 1263, 1319, 2360
BstX2I	RGATCY	1 cut(s)	1385
BstYI	RGATCY	1 cut(s)	1385
BstZ17I	GTATAC	1 cut(s)	2240
Bsu36I	CCTNAGG	1 cut(s)	2359
BsuI	GTATCC	2 cut(s)	1346, 1640
BsuRI	GGCC	4 cut(s)	1559, 2263, 2273, 2416
BtsCI	GGATG	3 cut(s)	217, 469, 1102
BtsI	GCAGTG	1 cut(s)	1261
BtsIMutI	CAGTG	4 cut(s)	947, 1261, 1849, 2386
BveI	ACCTGC	1 cut(s)	77
Cac8I	GCNNGC	1 cut(s)	1249
Cfr13I	GGNCC	6 cut(s)	833, 842, 1231, 1648, 2363, 2414
Cfr9I	CCCGGG	1 cut(s)	107
CseI	GACGC	2 cut(s)	2201, 2393
Csp6I	GTAC	3 cut(s)	975, 1158, 1797
CviQI	GTAC	3 cut(s)	975, 1158, 1797
DdeI	CTNAG	5 cut(s)	172, 412, 956, 2329, 2359
DpnI	GATC	6 cut(s)	531, 714, 1002, 1387, 1519, 2000
DpnII	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
EaeI	YGGCCR	2 cut(s)	1557, 2271
Eam1104I	CTCTTC	5 cut(s)	997, 1084, 1364, 1401, 2018
EarI	CTCTTC	5 cut(s)	997, 1084, 1364, 1401, 2018
EciI	GGCGGA	2 cut(s)	888, 2304
Ecl136II	GAGCTC	1 cut(s)	122
Eco130I	CCWWGG	2 cut(s)	1234, 1935
Eco24I	GRGCYC	3 cut(s)	124, 1047, 1208
Eco47I	GGWCC	5 cut(s)	833, 842, 1231, 1648, 2363
Eco53kI	GAGCTC	1 cut(s)	122
Eco57I	CTGAAG	8 cut(s)	576, 660, 806, 933, 990, 1386, 1629, 2201
Eco81I	CCTNAGG	1 cut(s)	2359
Eco88I	CYCGRG	2 cut(s)	107, 1974
Eco91I	GGTNACC	1 cut(s)	1979
EcoICRI	GAGCTC	1 cut(s)	122
EcoO109I	RGGNCCY	1 cut(s)	1231
EcoO65I	GGTNACC	1 cut(s)	1979
EcoRII	CCWGG	5 cut(s)	72, 207, 495, 868, 1381
EcoT14I	CCWWGG	2 cut(s)	1234, 1935
EcoT38I	GRGCYC	3 cut(s)	124, 1047, 1208
ErhI	CCWWGG	2 cut(s)	1234, 1935
FalI	AAGNNNNNCTT	4 cut(s)	829, 861, 1521, 1553
FaqI	GGGAC	2 cut(s)	90, 422
FauI	CCCGC	2 cut(s)	399, 656
FbaI	TGATCA	1 cut(s)	712
FblI	GTMKAC	1 cut(s)	2239
Fnu4HI	GCNGC	7 cut(s)	270, 759, 762, 886, 1252, 1308, 2374
FokI	GGATG	3 cut(s)	224, 456, 1109
FriOI	GRGCYC	3 cut(s)	124, 1047, 1208
Fsp4HI	GCNGC	7 cut(s)	270, 759, 762, 886, 1252, 1308, 2374
FspBI	CTAG	5 cut(s)	78, 230, 276, 1811, 2057
GluI	GCNGC	7 cut(s)	270, 759, 762, 886, 1252, 1308, 2374
GsaI	CCCAGC	1 cut(s)	1064
HaeIII	GGCC	4 cut(s)	1559, 2263, 2273, 2416
HapII	CCGG	5 cut(s)	108, 893, 1651, 1721, 1991
HgaI	GACGC	2 cut(s)	2201, 2393
Hin1I	GRCGYC	1 cut(s)	2193
HincII	GTYRAC	1 cut(s)	2170
HindII	GTYRAC	1 cut(s)	2170
HindIII	AAGCTT	2 cut(s)	897, 1496
HinfI	GANTC	8 cut(s)	238, 410, 583, 878, 1462, 1662, 1835, 2171
HpaII	CCGG	5 cut(s)	108, 893, 1651, 1721, 1991
HphI	GGTGA	5 cut(s)	446, 587, 1049, 1065, 1371
Hpy166II	GTNNAC	2 cut(s)	2170, 2240
Hpy188I	TCNGA	9 cut(s)	64, 751, 825, 1009, 1405, 1604, 2020, 2095, 2104
Hpy188III	TCNNGA	9 cut(s)	414, 506, 560, 1198, 1391, 1541, 1738, 2134, 2361
Hpy8I	GTNNAC	2 cut(s)	2170, 2240
Hpy99I	CGWCG	2 cut(s)	982, 2201
HpyCH4III	ACNGT	6 cut(s)	388, 1127, 1157, 1853, 2009, 2381
HpyCH4IV	ACGT	4 cut(s)	546, 1224, 1872, 2369
HpyF10VI	GCNNNNNNNGC	4 cut(s)	534, 733, 767, 1904
HpyF3I	CTNAG	5 cut(s)	172, 412, 956, 2329, 2359
HpySE526I	ACGT	4 cut(s)	546, 1224, 1872, 2369
Hsp92I	GRCGYC	1 cut(s)	2193
Ksp22I	TGATCA	1 cut(s)	712
Kzo9I	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
LmnI	GCTCC	7 cut(s)	119, 542, 910, 965, 1244, 1881, 1939
Lsp1109I	GCAGC	6 cut(s)	256, 745, 748, 1263, 1319, 2360
LweI	GCATC	3 cut(s)	689, 1125, 2127
MaeI	CTAG	5 cut(s)	78, 230, 276, 1811, 2057
MaeII	ACGT	4 cut(s)	546, 1224, 1872, 2369
MaeIII	GTNAC	9 cut(s)	214, 388, 575, 670, 926, 1454, 1612, 1853, 1979
MalI	GATC	6 cut(s)	531, 714, 1002, 1387, 1519, 2000
MboI	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
MflI	RGATCY	1 cut(s)	1385
MhlI	GDGCHC	6 cut(s)	124, 907, 947, 1047, 1208, 1878
MlsI	TGGCCA	1 cut(s)	2273
MluNI	TGGCCA	1 cut(s)	2273
MlyI	GAGTC	3 cut(s)	404, 872, 2165
MmeI	TCCRAC	4 cut(s)	497, 564, 1551, 2345
Mox20I	TGGCCA	1 cut(s)	2273
MroXI	GAANNNNTTC	4 cut(s)	1286, 1484, 1533, 1598
MscI	TGGCCA	1 cut(s)	2273
MseI	TTAA	1 cut(s)	1227
MslI	CAYNNNNRTG	2 cut(s)	1993, 2233
Msp20I	TGGCCA	1 cut(s)	2273
MspA1I	CMGCKG	2 cut(s)	176, 1060
MspI	CCGG	5 cut(s)	108, 893, 1651, 1721, 1991
MspR9I	CCNGG	9 cut(s)	74, 108, 109, 209, 497, 870, 893, 1383, 1721
Mva1269I	GAATGC	2 cut(s)	1760, 2052
MvaI	CCWGG	5 cut(s)	74, 209, 497, 870, 1383
MwoI	GCNNNNNNNGC	4 cut(s)	534, 733, 767, 1904
NciI	CCSGG	4 cut(s)	108, 109, 893, 1721
NdeII	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
NlaIV	GGNNCC	7 cut(s)	283, 494, 1015, 1289, 1549, 1717, 2386
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	5 cut(s)	214, 575, 670, 926, 1853
NspI	RCATGY	1 cut(s)	2254
NspV	TTCGAA	1 cut(s)	1082
OliI	CACNNNNGTG	1 cut(s)	1993
PciI	ACATGT	1 cut(s)	2250
PctI	GAATGC	2 cut(s)	1760, 2052
PdmI	GAANNNNTTC	4 cut(s)	1286, 1484, 1533, 1598
PfeI	GAWTC	5 cut(s)	238, 583, 1462, 1662, 1835
PkrI	GCNGC	7 cut(s)	271, 760, 763, 887, 1253, 1309, 2375
PleI	GAGTC	3 cut(s)	404, 872, 2165
PpsI	GAGTC	3 cut(s)	404, 872, 2165
PpuMI	RGGWCCY	1 cut(s)	1231
PscI	ACATGT	1 cut(s)	2250
PsiI	TTATAA	1 cut(s)	1301
Psp124BI	GAGCTC	1 cut(s)	124
Psp5II	RGGWCCY	1 cut(s)	1231
Psp6I	CCWGG	5 cut(s)	72, 207, 495, 868, 1381
PspEI	GGTNACC	1 cut(s)	1979
PspFI	CCCAGC	1 cut(s)	1060
PspGI	CCWGG	5 cut(s)	72, 207, 495, 868, 1381
PspN4I	GGNNCC	7 cut(s)	283, 494, 1015, 1289, 1549, 1717, 2386
PspPI	GGNCC	6 cut(s)	833, 842, 1231, 1648, 2363, 2414
PspPPI	RGGWCCY	1 cut(s)	1231
PstI	CTGCAG	1 cut(s)	2401
PsuI	RGATCY	1 cut(s)	1385
PvuII	CAGCTG	1 cut(s)	176
RsaI	GTAC	3 cut(s)	976, 1159, 1798
RsaNI	GTAC	3 cut(s)	975, 1158, 1797
RseI	CAYNNNNRTG	2 cut(s)	1993, 2233
SacI	GAGCTC	1 cut(s)	124
SaqAI	TTAA	1 cut(s)	1227
SatI	GCNGC	7 cut(s)	270, 759, 762, 886, 1252, 1308, 2374
Sau3AI	GATC	6 cut(s)	529, 712, 1000, 1385, 1517, 1998
Sau96I	GGNCC	6 cut(s)	833, 842, 1231, 1648, 2363, 2414
SchI	GAGTC	3 cut(s)	404, 872, 2165
ScrFI	CCNGG	9 cut(s)	74, 108, 109, 209, 497, 870, 893, 1383, 1721
SduI	GDGCHC	6 cut(s)	124, 907, 947, 1047, 1208, 1878
SfaNI	GCATC	3 cut(s)	689, 1125, 2127
SfcI	CTRYAG	3 cut(s)	366, 2377, 2397
SfuI	TTCGAA	1 cut(s)	1082
SinI	GGWCC	5 cut(s)	833, 842, 1231, 1648, 2363
SmaI	CCCGGG	1 cut(s)	109
SmiMI	CAYNNNNRTG	2 cut(s)	1993, 2233
SsiI	CCGC	7 cut(s)	406, 663, 873, 886, 1058, 2214, 2315
SspMI	CTAG	5 cut(s)	78, 230, 276, 1811, 2057
SstI	GAGCTC	1 cut(s)	124
StyD4I	CCNGG	9 cut(s)	72, 106, 107, 207, 495, 868, 891, 1381, 1719
StyI	CCWWGG	2 cut(s)	1234, 1935
TaaI	ACNGT	6 cut(s)	388, 1127, 1157, 1853, 2009, 2381
TaiI	ACGT	4 cut(s)	549, 1227, 1875, 2372
TaqI	TCGA	8 cut(s)	85, 167, 561, 923, 1082, 1197, 1267, 1966
TatI	WGTACW	1 cut(s)	1157
TauI	GCSGC	1 cut(s)	888
TfiI	GAWTC	5 cut(s)	238, 583, 1462, 1662, 1835
Tru1I	TTAA	1 cut(s)	1227
Tru9I	TTAA	1 cut(s)	1227
TscAI	CASTG	4 cut(s)	947, 1261, 1856, 2386
TseFI	GTSAC	5 cut(s)	214, 575, 670, 926, 1853
TseI	GCWGC	6 cut(s)	269, 758, 761, 1251, 1307, 2373
Tsp45I	GTSAC	5 cut(s)	214, 575, 670, 926, 1853
TspGWI	ACGGA	1 cut(s)	1436
TspMI	CCCGGG	1 cut(s)	107
TspRI	CASTG	4 cut(s)	947, 1261, 1856, 2386
VpaK11BI	GGWCC	5 cut(s)	833, 842, 1231, 1648, 2363
XapI	RAATTY	3 cut(s)	179, 418, 694
XceI	RCATGY	1 cut(s)	2254
XcmI	CCANNNNNNNNNTGG	1 cut(s)	615
XmaI	CCCGGG	1 cut(s)	107
XmiI	GTMKAC	1 cut(s)	2239
XmnI	GAANNNNTTC	4 cut(s)	1286, 1484, 1533, 1598
XspI	CTAG	5 cut(s)	78, 230, 276, 1811, 2057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.