Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002245

Physical Location & Seq

Genomic Coordinates Reverse (-)

9119437 .. 9122302

Gene Structure 2866 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1125500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

ATGCTTTTCGCCAATTCACATAAGTGCTTTCATCTTGATCCTTTTCTGGGTCAAAGTTGTCTGCGTTTCTCCTGCTGGCCAGCTATCTGGTACTTCTCCTGTACCGGTTTTCATTTGGCCATGGGGGATATGAATTTCATTCATTTCATGGGGTTCATATTTCTGTCTGTTCTTATCTCTTCTGAAACCTGCCTGGCTAGTGTTCGAAATTTTGGTTCGATTAATTCGTCGTTTCAATGGGCTCAAATGGACTGGATTGACAACAATGGGTTGTTTCTGTTATCTAACAAGTCCGAGTTTGGTTTTGGCTTCCAGACTACTCCCAATGATGTCACATTGTTTCTGCTGGTTGTTGTCCACAAGGACAGTTCTACGGTGGTCTGGACTGCGAATAGGGGTTCCCCGGTTTCAAATTCTGATAAAATTGTGTTTGATGCTAAGAGTGGTGTGTCTTTGCAAAAAGGTGGAAGGGTGGTTTGGTCTGCGGATACTGGTGGTAAAAGCGTATCTACAGTAGAATTGCAGGACTCGGGAAATTTAGTTTTGAATGGAGATGACAAAGGAGTAGTTTGGCAGAGTTTTAGCCATCCAACTGATACCCTATTATGGAATCAGGAATTTTCGGAAGGAATGAAGCTTGTAAGCAATCCTAGCTCTAACAACTTGAGTTATATTCTTCAAATCAAGTCCGGGGACTTGGTTCTTTCCGCAGGTTTCCAAACACCACAGCCGTATTGGTCTATGGCGAAAGAAAGCCGTAAAACAATCAACATAGACGGTGGTGTAGTCACTTCAGCAACTATCAGTGAAAATTCATGGAAGTTCTTTGATCGATCCAAAGCGTTGCTATGGCAATTTATTTTCTCGAGCAATATTGATGCAAATGCCACATGGATTGCAGTTTTAGGAAGTGATGGATTTATCTCTTTCGACAATCTTCAGAATGGAGGGTCAAGTGGTCCTTCAGAAACAAAAATACCAAGCGATTCGTGCAGCACACCAGAACCTTGTGATTCATACTTCGAATGTTATAGTAACAACAAGTGCCAGTGCCCTTCAGGTCTCAGCTCGCGTACTAATTGCAAGGCGGGGGTTGTCTCCTCATGTAATCCTTCGGAGGGTTCTACAGAGCTTGTAAATGCTGGGGATGGGCTCTATTATTTTGCATTGGGATATATTCCACCTTCTTCGAAAACTAATTTGAATGGTTGCCAAACGTCTTGCCTTGGCAACTGTTCGTGTGTTGCTATGTTCTTCCAAAACAGTACAAGAAATTGTTTTCTGTTTGACAGATTAGGTAGCTTCCAAAATTCTGACAAGGGCTCTGGCTTTGTTTCTTACATTAAGGTCTTGAGGGATGGAAGCAGTGGGAAGAGCGGAAACAGCAAGAAACACTTCCCTTATGTTGTGATCATAGCCATCTCGACAGTACTTGTTATTTGTGGCCTACTTTTTATGGGATACCGATACTACAGGAGGAAGGCAAGATCACCAGAATCTCCTACAGGGACCTCAGACGAGGAAAATTTCTTTGAAAATATGACTGGCATGCCCATTCGTTTCAGTTACAGAGATCTCCAAACTGCAACAAATAACTACTCGGTGAAGCTAGGGCAAGGAGGTTTTGGCTCGGTTTACCAAGGGAGTCTCCCAGATGGGACTCAACTGGCTGTGAAGAAGTTGGAAGGCATTGGTCAGGGAAAGAAAGAGTTTCGAGCTGAAGTTAGCATCATTGGCAGTATCCATCATCTGCACTTGGTCCGGCTCAGGGGCTTCTGTGCAGAAGGAAGTCATCGACTTCTGGTTTACGATTACATGGCAAATGGGTCTCTTGATAAATGGATTTTCAAGAAAAACAACGGAAAATTCCTATTGGATTGGGAGACAAGATTCAATATAGCATTGGGTACGGCTAAAGGGCTAGCATATCTCCATGAAGATTGTGATGTGAAGATTGTTCACTGTGACATAAAACCTGAAAATGTTCTCCTCGACACTAATTACCTTGCCAAAGTCTCAGATTTTGGTTTGGCAAAGCTAATGACCAGGGAACAGAGCCATGTTTTCACAACGCTAAGAGGAACCCGAGGGTACCTTGCACCGGAGTGGATCACCAACTACGCAATATCAGAGAAGAGTGATGTGTACAGCTATGGAATGCTCTTGCTAGAGATCATTGGTGGGAGAAAGAATTACGACCCGACAGAAACTTCAGAAAAATCCCATCTTCCATCTTATGCCTTCAAGATGTTGGAAGAAGGCAAAATGAGGGACATCCTGGACACAATGCTAGGGAAGGATGAAGCCGACGAGAGGGTACACACAGCCATTATGGTTGCACTGTGGTGCATACAGGAAGACATGTCTGTGAGACCATCAATGACGAAGGTTGTCCAAATGCTTGAAGGCCTGTATCCCGTTCCCCAGCCTCCAACCTCCAACTCAATGGGGTCTCGCCTTTATTCGAATTTCTTCAAATCAGTCAGCGATGAGGGGACTTCCTCAGGACCATCAGACTACAACAGCGATGCCTACCTTTCTGCAGTGCGCCTCTCCGGCCCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019899 GO:0031625 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044464 GO:0046777 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr

Protein Analysis

856

Amino Acids

94.52

Weight (kDa)

6.37

Isoelectric Point (pI)

35.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	125 - 207	6.8e-17	D-mannose binding lectin
Pkinase	PF00069	535 - 799	5.5e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	535 - 801	3.8e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32300
fragaria_vesca	FvH4_2g29050 FvH4_2g29070
malus_domestica	MD00G1144200.v1.1 MD15G1121900.v1.1 MD15G1122800.v1.1 MD15G1125500.v1.1
prunus_persica	Prupe.1G481100_v2.0.a1
pyrus_communis	pycom15g10990 pycom15g11300
rosa_chinensis	RchiOBHm_Chr4g0385931 RchiOBHm_Chr6g0297921 RchiOBHm_Chr6g0297931
rosa_laevigata	RLG00000010199 RLG00000011550 RLG00000011551
rosa_multiflora	Rmu_co8186410.1_g000001 Rmu_sc0007302.1_g000003 Rmu_sc0007302.1_g000004 Rmu_sc0007400.1_g000011 Rmu_sc0011097.1_g000002 Rmu_sc0011097.1_g000003 Rmu_sc0011097.1_g000004 Rmu_sc0015868.1_g000001 Rmu_sc0030316.1_g000001
rosa_roxburghii	Rroxscaffold_5G00333530 Rroxscaffold_7G00170060 Rroxscaffold_7G00178900 Rroxscaffold_7G00178910
rosa_rugosa	Rorug03G0303100 Rorug06G0276800
rosa_samantha	Rh4CG008200 Rh4DG007100 Rh6AG387500 Rh6BG395900 Rh6CG401600 Rh6CG401700 Rh6CG401800 Rh6DG388100
rosa_wichuraiana	Rw4G000320 Rw6G033760 Rw6G033810 Rw6G033820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	197, 701
Acc65I	GGTACC	1 cut(s)	2091
AccB1I	GGYRCC	1 cut(s)	2091
AccBSI	CCGCTC	1 cut(s)	1377
AccII	CGCG	1 cut(s)	1072
AciI	CCGC	4 cut(s)	485, 708, 1088, 1377
AclWI	GGATC	3 cut(s)	32, 828, 2117
AcoI	YGGCCR	2 cut(s)	77, 117
AcuI	CTGAAG	6 cut(s)	777, 923, 948, 1041, 1740, 2196
AfaI	GTAC	9 cut(s)	92, 103, 1075, 1267, 1431, 1909, 2093, 2147, 2319
AfiI	CCNNNNNNNGG	6 cut(s)	47, 606, 1118, 1768, 2101, 2313
AflIII	ACRYGT	1 cut(s)	2361
AgeI	ACCGGT	1 cut(s)	104
AjnI	CCWGG	3 cut(s)	192, 2045, 2277
AjuI	GAANNNNNNNTTGG	2 cut(s)	460, 492
AleI	CACNNNNGTG	3 cut(s)	22, 2104, 2344
Alw26I	GTCTC	8 cut(s)	1067, 1102, 1652, 1833, 1877, 2020, 2365, 2457
AlwI	GGATC	3 cut(s)	32, 828, 2117
Ama87I	CYCGRG	3 cut(s)	529, 865, 2085
AoxI	GGCC	5 cut(s)	77, 117, 1444, 2407, 2557
ApeKI	GCWGC	1 cut(s)	993
AseI	ATTAAT	1 cut(s)	222
AsiGI	ACCGGT	1 cut(s)	104
Asp700I	GAANNNNTTC	3 cut(s)	1394, 1983, 2471
Asp718I	GGTACC	1 cut(s)	2091
AspLEI	GCGC	1 cut(s)	2550
AspS9I	GGNCC	5 cut(s)	959, 1509, 1759, 2507, 2558
AsuC2I	CCSGG	2 cut(s)	404, 691
AsuHPI	GGTGA	3 cut(s)	1482, 1615, 2104
AsuII	TTCGAA	4 cut(s)	205, 1023, 1190, 2465
AsuNHI	GCTAGC	1 cut(s)	1921
AvaI	CYCGRG	3 cut(s)	529, 865, 2085
AvaII	GGWCC	4 cut(s)	959, 1509, 1759, 2507
AxyI	CCTNAGG	1 cut(s)	2503
BaeGI	GKGCMC	1 cut(s)	1055
BalI	TGGCCA	2 cut(s)	79, 119
BanI	GGYRCC	1 cut(s)	2091
BanII	GRGCYC	3 cut(s)	244, 1155, 1325
BbsI	GAAGAC	1 cut(s)	2364
BbvI	GCAGC	1 cut(s)	1005
BceAI	ACGGC	3 cut(s)	715, 741, 1926
BciT130I	CCWGG	3 cut(s)	194, 2047, 2279
BciVI	GTATCC	4 cut(s)	481, 1454, 1751, 2424
BclI	TGATCA	1 cut(s)	1410
BcnI	CCSGG	2 cut(s)	404, 691
BcoDI	GTCTC	8 cut(s)	1067, 1102, 1652, 1833, 1877, 2020, 2365, 2457
BfaI	CTAG	6 cut(s)	198, 651, 1610, 1922, 2168, 2291
BfmI	CTRYAG	5 cut(s)	510, 1125, 1471, 1503, 2541
BfuAI	ACCTGC	2 cut(s)	197, 701
BfuI	GTATCC	4 cut(s)	481, 1454, 1751, 2424
BglI	GCCNNNNNGGC	1 cut(s)	2556
BglII	AGATCT	1 cut(s)	1573
BisI	GCNGC	1 cut(s)	994
BlsI	GCNGC	1 cut(s)	995
BmcAI	AGTACT	1 cut(s)	1431
Bme1390I	CCNGG	5 cut(s)	194, 404, 691, 2047, 2279
Bme18I	GGWCC	4 cut(s)	959, 1509, 1759, 2507
BmeT110I	CYCGRG	3 cut(s)	529, 865, 2085
BmgT120I	GGNCC	5 cut(s)	959, 1509, 1759, 2507, 2558
BmiI	GGNNCC	4 cut(s)	400, 1510, 2083, 2093
BmrFI	CCNGG	5 cut(s)	194, 404, 691, 2047, 2279
BmsI	GCATC	4 cut(s)	424, 868, 1737, 2518
BmtI	GCTAGC	1 cut(s)	1925
BpiI	GAAGAC	1 cut(s)	2364
Bpu10I	CCTNAGC	1 cut(s)	1766
Bpu14I	TTCGAA	4 cut(s)	205, 1023, 1190, 2465
BpuEI	CTTGAG	2 cut(s)	685, 1372
BpuMI	CCSGG	2 cut(s)	404, 691
Bsa29I	ATCGAT	1 cut(s)	832
BsaI	GGTCTC	4 cut(s)	1067, 1833, 2365, 2457
BsaJI	CCNNGG	7 cut(s)	120, 402, 690, 1225, 1639, 2046, 2086
BsaWI	WCCGGW	2 cut(s)	104, 2101
Bsc4I	CCNNNNNNNGG	6 cut(s)	47, 606, 1118, 1768, 2101, 2313
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	5 cut(s)	257, 496, 1048, 1549, 1671
Bse21I	CCTNAGG	1 cut(s)	2503
BseBI	CCWGG	3 cut(s)	194, 2047, 2279
BseCI	ATCGAT	1 cut(s)	832
BseDI	CCNNGG	7 cut(s)	120, 402, 690, 1225, 1639, 2046, 2086
BseGI	GGATG	5 cut(s)	586, 1153, 1363, 2274, 2305
BseLI	CCNNNNNNNGG	6 cut(s)	47, 606, 1118, 1768, 2101, 2313
BseMII	CTCAG	5 cut(s)	1078, 1527, 1780, 2031, 2517
BseNI	ACTGG	5 cut(s)	257, 496, 1048, 1549, 1671
BseRI	GAGGAG	2 cut(s)	1090, 1979
BseSI	GKGCMC	1 cut(s)	1055
BseXI	GCAGC	1 cut(s)	1005
BseYI	CCCAGC	2 cut(s)	1142, 2424
BsgI	GTGCAG	3 cut(s)	1012, 1736, 1800
Bsh1236I	CGCG	1 cut(s)	1072
BshFI	GGCC	5 cut(s)	79, 119, 1446, 2409, 2559
BshNI	GGYRCC	1 cut(s)	2091
BshTI	ACCGGT	1 cut(s)	104
BshVI	ATCGAT	1 cut(s)	832
BsiHKCI	CYCGRG	3 cut(s)	529, 865, 2085
BsiSI	CCGG	6 cut(s)	105, 404, 690, 1762, 2102, 2556
BslFI	GGGAC	5 cut(s)	707, 1522, 1672, 2285, 2509
BslI	CCNNNNNNNGG	6 cut(s)	47, 606, 1118, 1768, 2101, 2313
BsmAI	GTCTC	8 cut(s)	1067, 1102, 1652, 1833, 1877, 2020, 2365, 2457
BsmFI	GGGAC	5 cut(s)	707, 1522, 1672, 2285, 2509
BsmI	GAATGC	1 cut(s)	2163
BsnI	GGCC	5 cut(s)	79, 119, 1446, 2409, 2559
Bso31I	GGTCTC	4 cut(s)	1067, 1833, 2365, 2457
BsoBI	CYCGRG	3 cut(s)	529, 865, 2085
Bsp119I	TTCGAA	4 cut(s)	205, 1023, 1190, 2465
Bsp1286I	GDGCHC	4 cut(s)	244, 1055, 1155, 1325
Bsp1407I	TGTACA	1 cut(s)	2145
Bsp143I	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
Bsp19I	CCATGG	1 cut(s)	120
BspACI	CCGC	4 cut(s)	485, 708, 1088, 1377
BspANI	GGCC	5 cut(s)	79, 119, 1446, 2409, 2559
BspCNI	CTCAG	5 cut(s)	1077, 1526, 1779, 2030, 2516
BspDI	ATCGAT	1 cut(s)	832
BspFNI	CGCG	1 cut(s)	1072
BspLI	GGNNCC	4 cut(s)	400, 1510, 2083, 2093
BspMAI	CTGCAG	1 cut(s)	2545
BspMI	ACCTGC	2 cut(s)	197, 701
BspOI	GCTAGC	1 cut(s)	1925
BspPI	GGATC	3 cut(s)	32, 828, 2117
BspQI	GCTCTTC	1 cut(s)	1367
BspT104I	TTCGAA	4 cut(s)	205, 1023, 1190, 2465
BspT107I	GGYRCC	1 cut(s)	2091
BspTNI	GGTCTC	4 cut(s)	1067, 1833, 2365, 2457
BsrBI	CCGCTC	1 cut(s)	1377
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	2145
BsrI	ACTGG	5 cut(s)	257, 496, 1048, 1549, 1671
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	7 cut(s)	120, 402, 690, 1225, 1639, 2046, 2086
BssMI	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
BssT1I	CCWWGG	3 cut(s)	120, 1225, 1639
Bst2UI	CCWGG	3 cut(s)	194, 2047, 2279
Bst4CI	ACNGT	9 cut(s)	368, 376, 514, 779, 1235, 1265, 1429, 1964, 2343
Bst6I	CTCTTC	3 cut(s)	184, 1367, 2129
BstAUI	TGTACA	1 cut(s)	2145
BstBI	TTCGAA	4 cut(s)	205, 1023, 1190, 2465
BstC8I	GCNNGC	5 cut(s)	77, 81, 1070, 1550, 1923
BstDEI	CTNAG	7 cut(s)	438, 1064, 1513, 1766, 2017, 2075, 2503
BstDSI	CCRYGG	1 cut(s)	120
BstF5I	GGATG	5 cut(s)	586, 1153, 1363, 2274, 2305
BstFNI	CGCG	1 cut(s)	1072
BstHHI	GCGC	1 cut(s)	2550
BstKTI	GATC	8 cut(s)	40, 832, 836, 1413, 1490, 1576, 2112, 2175
BstMAI	GTCTC	8 cut(s)	1067, 1102, 1652, 1833, 1877, 2020, 2365, 2457
BstMBI	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
BstMWI	GCNNNNNNNGC	5 cut(s)	651, 990, 1383, 1734, 2556
BstNI	CCWGG	3 cut(s)	194, 2047, 2279
BstNSI	RCATGY	2 cut(s)	1552, 2365
BstSCI	CCNGG	5 cut(s)	192, 402, 689, 2045, 2277
BstSFI	CTRYAG	5 cut(s)	510, 1125, 1471, 1503, 2541
BstSLI	GKGCMC	1 cut(s)	1055
BstUI	CGCG	1 cut(s)	1072
BstV1I	GCAGC	1 cut(s)	1005
BstV2I	GAAGAC	1 cut(s)	2364
BstX2I	RGATCY	1 cut(s)	1573
BstXI	CCANNNNNNTGG	2 cut(s)	87, 2446
BstYI	RGATCY	1 cut(s)	1573
Bsu15I	ATCGAT	1 cut(s)	832
Bsu36I	CCTNAGG	1 cut(s)	2503
BsuI	GTATCC	4 cut(s)	481, 1454, 1751, 2424
BsuRI	GGCC	5 cut(s)	79, 119, 1446, 2409, 2559
BsuTUI	ATCGAT	1 cut(s)	832
BtgI	CCRYGG	1 cut(s)	120
BtgZI	GCGATG	2 cut(s)	2502, 2541
BtsCI	GGATG	5 cut(s)	586, 1153, 1363, 2274, 2305
BtsI	GCAGTG	2 cut(s)	1372, 2550
BtsIMutI	CAGTG	6 cut(s)	811, 1055, 1372, 1960, 2339, 2550
BveI	ACCTGC	2 cut(s)	197, 701
Cac8I	GCNNGC	5 cut(s)	77, 81, 1070, 1550, 1923
CfoI	GCGC	1 cut(s)	2550
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	5 cut(s)	959, 1509, 1759, 2507, 2558
ClaI	ATCGAT	1 cut(s)	832
Csp6I	GTAC	9 cut(s)	91, 102, 1074, 1266, 1430, 1908, 2092, 2146, 2318
CspAI	ACCGGT	1 cut(s)	104
CspCI	CAANNNNNGTGG	2 cut(s)	877, 912
CviQI	GTAC	9 cut(s)	91, 102, 1074, 1266, 1430, 1908, 2092, 2146, 2318
DdeI	CTNAG	7 cut(s)	438, 1064, 1513, 1766, 2017, 2075, 2503
DpnI	GATC	8 cut(s)	39, 831, 835, 1412, 1489, 1575, 2111, 2174
DpnII	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
EaeI	YGGCCR	2 cut(s)	77, 117
Eam1104I	CTCTTC	3 cut(s)	184, 1367, 2129
EarI	CTCTTC	3 cut(s)	184, 1367, 2129
Eco130I	CCWWGG	3 cut(s)	120, 1225, 1639
Eco147I	AGGCCT	1 cut(s)	2409
Eco24I	GRGCYC	3 cut(s)	244, 1155, 1325
Eco31I	GGTCTC	4 cut(s)	1067, 1833, 2365, 2457
Eco47I	GGWCC	4 cut(s)	959, 1509, 1759, 2507
Eco57I	CTGAAG	6 cut(s)	777, 923, 948, 1041, 1740, 2196
Eco81I	CCTNAGG	1 cut(s)	2503
Eco88I	CYCGRG	3 cut(s)	529, 865, 2085
EcoO109I	RGGNCCY	1 cut(s)	1509
EcoRII	CCWGG	3 cut(s)	192, 2045, 2277
EcoT14I	CCWWGG	3 cut(s)	120, 1225, 1639
EcoT38I	GRGCYC	3 cut(s)	244, 1155, 1325
ErhI	CCWWGG	3 cut(s)	120, 1225, 1639
FalI	AAGNNNNNCTT	4 cut(s)	946, 978, 1379, 1411
FaqI	GGGAC	5 cut(s)	707, 1522, 1672, 2285, 2509
FauI	CCCGC	1 cut(s)	1081
FbaI	TGATCA	1 cut(s)	1410
Fnu4HI	GCNGC	1 cut(s)	994
FokI	GGATG	5 cut(s)	573, 1160, 1370, 2261, 2312
FriOI	GRGCYC	3 cut(s)	244, 1155, 1325
Fsp4HI	GCNGC	1 cut(s)	994
FspBI	CTAG	6 cut(s)	198, 651, 1610, 1922, 2168, 2291
GlaI	GCGC	1 cut(s)	2549
GluI	GCNGC	1 cut(s)	994
GsaI	CCCAGC	2 cut(s)	1146, 2428
HaeIII	GGCC	5 cut(s)	79, 119, 1446, 2409, 2559
HapII	CCGG	6 cut(s)	105, 404, 690, 1762, 2102, 2556
HhaI	GCGC	1 cut(s)	2550
Hin6I	GCGC	1 cut(s)	2548
HinP1I	GCGC	1 cut(s)	2548
HindIII	AAGCTT	1 cut(s)	635
HinfI	GANTC	8 cut(s)	527, 610, 986, 1013, 1496, 1645, 1660, 1890
HpaII	CCGG	6 cut(s)	105, 404, 690, 1762, 2102, 2556
HphI	GGTGA	3 cut(s)	1482, 1615, 2104
Hpy166II	GTNNAC	6 cut(s)	358, 1636, 1807, 1960, 2146, 2320
Hpy8I	GTNNAC	6 cut(s)	358, 1636, 1807, 1960, 2146, 2320
Hpy99I	CGWCG	2 cut(s)	232, 2312
HpyCH4III	ACNGT	9 cut(s)	368, 376, 514, 779, 1235, 1265, 1429, 1964, 2343
HpyCH4IV	ACGT	1 cut(s)	1217
HpyF10VI	GCNNNNNNNGC	5 cut(s)	651, 990, 1383, 1734, 2556
HpyF3I	CTNAG	7 cut(s)	438, 1064, 1513, 1766, 2017, 2075, 2503
HpySE526I	ACGT	1 cut(s)	1217
HspAI	GCGC	1 cut(s)	2548
KpnI	GGTACC	1 cut(s)	2095
Ksp22I	TGATCA	1 cut(s)	1410
Kzo9I	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
LguI	GCTCTTC	1 cut(s)	1367
Lsp1109I	GCAGC	1 cut(s)	1005
LweI	GCATC	4 cut(s)	424, 868, 1737, 2518
MaeI	CTAG	6 cut(s)	198, 651, 1610, 1922, 2168, 2291
MaeII	ACGT	1 cut(s)	1217
MaeIII	GTNAC	5 cut(s)	331, 787, 1034, 1565, 1964
MalI	GATC	8 cut(s)	39, 831, 835, 1412, 1489, 1575, 2111, 2174
MbiI	CCGCTC	1 cut(s)	1377
MboI	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
MflI	RGATCY	1 cut(s)	1573
MhlI	GDGCHC	4 cut(s)	244, 1055, 1155, 1325
MlsI	TGGCCA	2 cut(s)	79, 119
MluNI	TGGCCA	2 cut(s)	79, 119
MlyI	GAGTC	3 cut(s)	521, 1654, 1654
MmeI	TCCRAC	5 cut(s)	614, 1662, 2232, 2456, 2463
Mox20I	TGGCCA	2 cut(s)	79, 119
MroXI	GAANNNNTTC	3 cut(s)	1394, 1983, 2471
MscI	TGGCCA	2 cut(s)	79, 119
MseI	TTAA	2 cut(s)	222, 1344
MslI	CAYNNNNRTG	4 cut(s)	22, 2104, 2344, 2366
Msp20I	TGGCCA	2 cut(s)	79, 119
MspI	CCGG	6 cut(s)	105, 404, 690, 1762, 2102, 2556
MspR9I	CCNGG	5 cut(s)	194, 404, 691, 2047, 2279
Mva1269I	GAATGC	1 cut(s)	2163
MvaI	CCWGG	3 cut(s)	194, 2047, 2279
MvnI	CGCG	1 cut(s)	1072
MwoI	GCNNNNNNNGC	5 cut(s)	651, 990, 1383, 1734, 2556
NciI	CCSGG	2 cut(s)	404, 691
NcoI	CCATGG	1 cut(s)	120
NdeII	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
NheI	GCTAGC	1 cut(s)	1921
NlaIV	GGNNCC	4 cut(s)	400, 1510, 2083, 2093
NmuCI	GTSAC	3 cut(s)	331, 787, 1964
NspI	RCATGY	2 cut(s)	1552, 2365
NspV	TTCGAA	4 cut(s)	205, 1023, 1190, 2465
OliI	CACNNNNGTG	3 cut(s)	22, 2104, 2344
PaeI	GCATGC	1 cut(s)	1552
PaeR7I	CTCGAG	1 cut(s)	865
PceI	AGGCCT	1 cut(s)	2409
PciI	ACATGT	1 cut(s)	2361
PciSI	GCTCTTC	1 cut(s)	1367
PcsI	WCGNNNNNNNCGW	1 cut(s)	224
PctI	GAATGC	1 cut(s)	2163
PdmI	GAANNNNTTC	3 cut(s)	1394, 1983, 2471
PfeI	GAWTC	5 cut(s)	610, 986, 1013, 1496, 1890
PfoI	TCCNGGA	1 cut(s)	2277
PinAI	ACCGGT	1 cut(s)	104
PkrI	GCNGC	1 cut(s)	995
PleI	GAGTC	3 cut(s)	521, 1653, 1654
PpsI	GAGTC	3 cut(s)	521, 1653, 1654
PpuMI	RGGWCCY	1 cut(s)	1509
PscI	ACATGT	1 cut(s)	2361
PshBI	ATTAAT	1 cut(s)	222
Psp5II	RGGWCCY	1 cut(s)	1509
Psp6I	CCWGG	3 cut(s)	192, 2045, 2277
PspFI	CCCAGC	2 cut(s)	1142, 2424
PspGI	CCWGG	3 cut(s)	192, 2045, 2277
PspN4I	GGNNCC	4 cut(s)	400, 1510, 2083, 2093
PspPI	GGNCC	5 cut(s)	959, 1509, 1759, 2507, 2558
PspPPI	RGGWCCY	1 cut(s)	1509
PstI	CTGCAG	1 cut(s)	2545
PsuI	RGATCY	1 cut(s)	1573
RsaI	GTAC	9 cut(s)	92, 103, 1075, 1267, 1431, 1909, 2093, 2147, 2319
RsaNI	GTAC	9 cut(s)	91, 102, 1074, 1266, 1430, 1908, 2092, 2146, 2318
RseI	CAYNNNNRTG	4 cut(s)	22, 2104, 2344, 2366
SapI	GCTCTTC	1 cut(s)	1367
SaqAI	TTAA	2 cut(s)	222, 1344
SatI	GCNGC	1 cut(s)	994
Sau3AI	GATC	8 cut(s)	37, 829, 833, 1410, 1487, 1573, 2109, 2172
Sau96I	GGNCC	5 cut(s)	959, 1509, 1759, 2507, 2558
ScaI	AGTACT	1 cut(s)	1431
SchI	GAGTC	3 cut(s)	521, 1654, 1654
ScrFI	CCNGG	5 cut(s)	194, 404, 691, 2047, 2279
SduI	GDGCHC	4 cut(s)	244, 1055, 1155, 1325
SfaNI	GCATC	4 cut(s)	424, 868, 1737, 2518
SfcI	CTRYAG	5 cut(s)	510, 1125, 1471, 1503, 2541
Sfr274I	CTCGAG	1 cut(s)	865
SfuI	TTCGAA	4 cut(s)	205, 1023, 1190, 2465
SinI	GGWCC	4 cut(s)	959, 1509, 1759, 2507
SlaI	CTCGAG	1 cut(s)	865
SmiMI	CAYNNNNRTG	4 cut(s)	22, 2104, 2344, 2366
SmlI	CTYRAG	3 cut(s)	664, 865, 1351
SmoI	CTYRAG	3 cut(s)	664, 865, 1351
SphI	GCATGC	1 cut(s)	1552
SseBI	AGGCCT	1 cut(s)	2409
SsiI	CCGC	4 cut(s)	485, 708, 1088, 1377
SspI	AATATT	1 cut(s)	874
SspMI	CTAG	6 cut(s)	198, 651, 1610, 1922, 2168, 2291
StuI	AGGCCT	1 cut(s)	2409
StyD4I	CCNGG	5 cut(s)	192, 402, 689, 2045, 2277
StyI	CCWWGG	3 cut(s)	120, 1225, 1639
TaaI	ACNGT	9 cut(s)	368, 376, 514, 779, 1235, 1265, 1429, 1964, 2343
TaiI	ACGT	1 cut(s)	1220
TatI	WGTACW	3 cut(s)	1265, 1429, 2145
TfiI	GAWTC	5 cut(s)	610, 986, 1013, 1496, 1890
Tru1I	TTAA	2 cut(s)	222, 1344
Tru9I	TTAA	2 cut(s)	222, 1344
TscAI	CASTG	6 cut(s)	811, 1055, 1372, 1967, 2346, 2550
TseFI	GTSAC	3 cut(s)	331, 787, 1964
TseI	GCWGC	1 cut(s)	993
Tsp45I	GTSAC	3 cut(s)	331, 787, 1964
TspGWI	ACGGA	1 cut(s)	1875
TspRI	CASTG	6 cut(s)	811, 1055, 1372, 1967, 2346, 2550
VpaK11BI	GGWCC	4 cut(s)	959, 1509, 1759, 2507
VspI	ATTAAT	1 cut(s)	222
XceI	RCATGY	2 cut(s)	1552, 2365
XcmI	CCANNNNNNNNNTGG	1 cut(s)	732
XhoI	CTCGAG	1 cut(s)	865
XmnI	GAANNNNTTC	3 cut(s)	1394, 1983, 2471
XspI	CTAG	6 cut(s)	198, 651, 1610, 1922, 2168, 2291
ZrmI	AGTACT	1 cut(s)	1431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.