Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001826

Physical Location & Seq

Genomic Coordinates Forward (+)

4643510 .. 4646530

Gene Structure 3021 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G14400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1104 bp

ATGTTCATACTTCAAAACGAAGGGAAGTTGTTTACATCGGATTATCCAAAAGCGATGCATGACATTCTCGGCAAATATTCCCTTCTATTAGCCACCGGAGAAATTCACAGGAAACTAAAAAATGTTATTATTAGCTTCATCAATCTCACAAAGTCGAAACCTGACTTTCTTCACTGCGCAGAGAACCTCTCTATCTCGATACTAAAGTCATGGAAAAATTGCCGAGAAGTCGAATTCCATAAAGAAGTTAAAATATTTACTCTCAGTGTTATGGTAAACCAACTCTTGAGCATCAAGCCAGAAGACCCAGCAAGACTTTATGTATTGCAAGATTTTTTATCTTATATGAAAGGGTTTATCTCCTTACCAATACCGCTTCCAGGAACGGGTTATACAAACGCAATTAAGGCTAGGAAGAGATTGTCGGCGAGGGTTATGGGGATGATAAAAGAAAGAGAGCGCGAAGAAGAAGACATGAATAATGCAATAAGAGAAGAAGATTTTCTGGATTCGATAATTTCGAATGAAGATCTAAATTATGAAGAGAAAGTTAGCATTGTGTTGGACATTTTGCTTGGAGGCTTTGAGACAAGTGCTACTACTCTTTCCTTAGTCGTCTATTTTCTAGCAAAATCTCCAAATCTTCTTCACAAACTCAAGGAAGAACATGCAGCCATTAGAGCCAAGAAAGGGGATGGGGAACTTTTGAATTGGGAAGATTATCAGAAGATGGAATTCACTCAATGTGTGATTTCTGAGGCACTACGATGTGAATATGTGATTCCAAAGGGGTGGAAGGTGTTTCCAATCTTCACAGCAGTACATCTTGATCCCTCTCTTCATGAAAATCCTTTTGAATTTAATCCCATGAGATGGACCGATAAGGCTAAGATGAACAAGAAAACGACGGCGTTTGGAGGAGGAGTAAGGGTATGTCCTGGTGGTGAACTTGGCAAGCTCCAAATTGCTTTCTTCCTTCATCATCTTGTCCTCTCCTATAGGTGGAAAATAAAGTCAGATGAAATGCCAATCGCGCACCCTTACGTGGAGTTTAAGAGAGGCATGCTTTTGGAGATAGAGCCAACAAAATTCCTTGAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005488 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009647 GO:0009791 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0020037 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044238 GO:0046906 GO:0048037 GO:0048856 GO:0048878 GO:0050896 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0097159 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00905 ko01100 ko01110 map00905 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

367

Amino Acids

42.27

Weight (kDa)

7.17

Isoelectric Point (pI)

34.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	6 - 256	1e-19	Cytochrome P450
p450	PF00067	258 - 344	8.7e-20	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001826)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14400 AT5G14400 AT5G14400 AT5G14400
fragaria_vesca	FvH4_6g40310 FvH4_6g40310 FvH4_6g40310 FvH4_6g40310 FvH4_6g52040
malus_domestica	MD09G1020600.v1.1 MD09G1020700.v1.1 MD17G1120200.v1.1
prunus_persica	Prupe.3G147200_v2.0.a1 Prupe.3G193900_v2.0.a1 Prupe.3G193900_v2.0.a1 Prupe.3G295600_v2.0.a1
pyrus_communis	pycom111g01730
rosa_chinensis	RchiOBHm_Chr2g0155501 RchiOBHm_Chr2g0173551
rosa_laevigata	RLG00000020841 RLG00000022201
rosa_multiflora	Rmu_co8071130.1_g000001 Rmu_sc0001045.1_g000022 Rmu_sc0001046.1_g000003 Rmu_sc0002538.1_g000025 Rmu_sc0003439.1_g000011 Rmu_sc0029872.1_g000004
rosa_roxburghii	Rroxscaffold_2G00078790 Rroxscaffold_2G00093660
rosa_rugosa	Rorug02G0447300 Rorug02G0447400 Rorug02G0571200 Rorug02G0571300
rosa_samantha	Rh2AG513800 Rh2AG650000 Rh2BG524700 Rh2BG660400 Rh2CG498700 Rh2CG625400 Rh2DG533700 Rh2DG675800 Rh5AG197900 Rh5BG196500 Rh5BG196600
rosa_wichuraiana	Rw2G042230 Rw2G053350 Rw5G018070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	178
AccB7I	CCANNNNNTGG	1 cut(s)	873
AccII	CGCG	2 cut(s)	462, 1034
AciI	CCGC	1 cut(s)	374
AclWI	GGATC	1 cut(s)	824
AcsI	RAATTY	5 cut(s)	102, 233, 734, 857, 1088
AfaI	GTAC	1 cut(s)	822
AfiI	CCNNNNNNNGG	6 cut(s)	380, 386, 690, 873, 1002, 1045
AgsI	TTSAA	4 cut(s)	14, 709, 857, 1097
AjnI	CCWGG	2 cut(s)	379, 937
AluBI	AGCT	2 cut(s)	135, 958
AluI	AGCT	2 cut(s)	135, 958
Alw26I	GTCTC	1 cut(s)	581
AlwI	GGATC	1 cut(s)	824
ApeKI	GCWGC	1 cut(s)	671
ApoI	RAATTY	5 cut(s)	102, 233, 734, 857, 1088
Asp700I	GAANNNNTTC	1 cut(s)	501
AspLEI	GCGC	3 cut(s)	179, 462, 1036
AspS9I	GGNCC	1 cut(s)	876
AsuHPI	GGTGA	1 cut(s)	956
AsuII	TTCGAA	1 cut(s)	521
AvaII	GGWCC	1 cut(s)	876
BaeI	ACNNNNGTAYC	2 cut(s)	191, 224
BbsI	GAAGAC	2 cut(s)	309, 477
BbvI	GCAGC	1 cut(s)	683
BccI	CCATC	3 cut(s)	689, 724, 867
BceAI	ACGGC	1 cut(s)	924
BciT130I	CCWGG	2 cut(s)	381, 939
BcoDI	GTCTC	1 cut(s)	581
BfaI	CTAG	2 cut(s)	411, 626
BfmI	CTRYAG	1 cut(s)	997
BglII	AGATCT	1 cut(s)	529
BisI	GCNGC	1 cut(s)	672
BlsI	GCNGC	1 cut(s)	673
Bme1390I	CCNGG	2 cut(s)	381, 939
Bme18I	GGWCC	1 cut(s)	876
BmgT120I	GGNCC	1 cut(s)	876
BmrFI	CCNGG	2 cut(s)	381, 939
BmsI	GCATC	2 cut(s)	45, 300
BpiI	GAAGAC	2 cut(s)	309, 477
BplI	GAGNNNNNCTC	2 cut(s)	173, 205
Bpu14I	TTCGAA	1 cut(s)	521
BpuEI	CTTGAG	2 cut(s)	307, 641
BsaAI	YACGTR	1 cut(s)	1045
BsaWI	WCCGGW	1 cut(s)	95
BsaXI	ACNNNNNCTCC	4 cut(s)	909, 915, 939, 945
Bsc4I	CCNNNNNNNGG	6 cut(s)	380, 386, 690, 873, 1002, 1045
BseBI	CCWGG	2 cut(s)	381, 939
BseGI	GGATG	2 cut(s)	447, 700
BseLI	CCNNNNNNNGG	6 cut(s)	380, 386, 690, 873, 1002, 1045
BseMII	CTCAG	2 cut(s)	277, 747
BseRI	GAGGAG	2 cut(s)	933, 936
BseXI	GCAGC	1 cut(s)	683
BseYI	CCCAGC	1 cut(s)	307
Bsh1236I	CGCG	2 cut(s)	462, 1034
BsiSI	CCGG	1 cut(s)	96
BslI	CCNNNNNNNGG	6 cut(s)	380, 386, 690, 873, 1002, 1045
BsmAI	GTCTC	1 cut(s)	581
Bsp119I	TTCGAA	1 cut(s)	521
Bsp143I	GATC	2 cut(s)	529, 829
BspACI	CCGC	1 cut(s)	374
BspCNI	CTCAG	2 cut(s)	276, 748
BspFNI	CGCG	2 cut(s)	462, 1034
BspHI	TCATGA	1 cut(s)	841
BspPI	GGATC	1 cut(s)	824
BspT104I	TTCGAA	1 cut(s)	521
BssMI	GATC	2 cut(s)	529, 829
Bst2UI	CCWGG	2 cut(s)	381, 939
Bst6I	CTCTTC	3 cut(s)	410, 537, 843
BstBAI	YACGTR	1 cut(s)	1045
BstBI	TTCGAA	1 cut(s)	521
BstC8I	GCNNGC	2 cut(s)	956, 1064
BstDEI	CTNAG	4 cut(s)	263, 610, 756, 888
BstF5I	GGATG	2 cut(s)	447, 700
BstFNI	CGCG	2 cut(s)	462, 1034
BstHHI	GCGC	3 cut(s)	179, 462, 1036
BstKTI	GATC	2 cut(s)	532, 832
BstMAI	GTCTC	1 cut(s)	581
BstMBI	GATC	2 cut(s)	529, 829
BstMWI	GCNNNNNNNGC	3 cut(s)	407, 680, 1033
BstNI	CCWGG	2 cut(s)	381, 939
BstNSI	RCATGY	2 cut(s)	671, 1066
BstSCI	CCNGG	2 cut(s)	379, 937
BstSFI	CTRYAG	1 cut(s)	997
BstUI	CGCG	2 cut(s)	462, 1034
BstV1I	GCAGC	1 cut(s)	683
BstV2I	GAAGAC	2 cut(s)	309, 477
BstX2I	RGATCY	1 cut(s)	529
BstXI	CCANNNNNNTGG	1 cut(s)	792
BstYI	RGATCY	1 cut(s)	529
BtgZI	GCGATG	1 cut(s)	68
BtsCI	GGATG	2 cut(s)	447, 700
BtsI	GCAGTG	1 cut(s)	172
BtsIMutI	CAGTG	2 cut(s)	172, 271
Cac8I	GCNNGC	2 cut(s)	956, 1064
CciI	TCATGA	1 cut(s)	841
CfoI	GCGC	3 cut(s)	179, 462, 1036
Cfr13I	GGNCC	1 cut(s)	876
Csp6I	GTAC	1 cut(s)	821
CviAII	CATG	7 cut(s)	59, 210, 475, 668, 842, 868, 1063
CviQI	GTAC	1 cut(s)	821
DdeI	CTNAG	4 cut(s)	263, 610, 756, 888
DpnI	GATC	2 cut(s)	531, 831
DpnII	GATC	2 cut(s)	529, 829
Eam1104I	CTCTTC	3 cut(s)	410, 537, 843
EarI	CTCTTC	3 cut(s)	410, 537, 843
Eco47I	GGWCC	1 cut(s)	876
EcoRI	GAATTC	2 cut(s)	233, 734
EcoRII	CCWGG	2 cut(s)	379, 937
EcoT22I	ATGCAT	1 cut(s)	60
FaeI	CATG	7 cut(s)	62, 213, 478, 671, 845, 871, 1066
FatI	CATG	7 cut(s)	58, 209, 474, 667, 841, 867, 1062
Fnu4HI	GCNGC	1 cut(s)	672
FokI	GGATG	2 cut(s)	454, 707
Fsp4HI	GCNGC	1 cut(s)	672
FspBI	CTAG	2 cut(s)	411, 626
FspI	TGCGCA	1 cut(s)	178
GlaI	GCGC	3 cut(s)	178, 461, 1035
GluI	GCNGC	1 cut(s)	672
GsaI	CCCAGC	1 cut(s)	311
HapII	CCGG	1 cut(s)	96
HhaI	GCGC	3 cut(s)	179, 462, 1036
Hin1II	CATG	7 cut(s)	62, 213, 478, 671, 845, 871, 1066
Hin6I	GCGC	3 cut(s)	177, 460, 1034
HinP1I	GCGC	3 cut(s)	177, 460, 1034
HinfI	GANTC	2 cut(s)	509, 781
HpaII	CCGG	1 cut(s)	96
HphI	GGTGA	1 cut(s)	956
Hpy166II	GTNNAC	3 cut(s)	33, 277, 947
Hpy188I	TCNGA	4 cut(s)	40, 726, 757, 1018
Hpy188III	TCNNGA	5 cut(s)	196, 286, 506, 827, 842
Hpy8I	GTNNAC	3 cut(s)	33, 277, 947
Hpy99I	CGWCG	1 cut(s)	910
HpyAV	CCTTC	4 cut(s)	14, 92, 790, 986
HpyCH4IV	ACGT	1 cut(s)	1044
HpyCH4V	TGCA	4 cut(s)	58, 328, 485, 671
HpyF10VI	GCNNNNNNNGC	3 cut(s)	407, 680, 1033
HpyF3I	CTNAG	4 cut(s)	263, 610, 756, 888
HpySE526I	ACGT	1 cut(s)	1044
Hsp92II	CATG	7 cut(s)	62, 213, 478, 671, 845, 871, 1066
HspAI	GCGC	3 cut(s)	177, 460, 1034
Kzo9I	GATC	2 cut(s)	529, 829
LmnI	GCTCC	1 cut(s)	963
Lsp1109I	GCAGC	1 cut(s)	683
LweI	GCATC	2 cut(s)	45, 300
MaeI	CTAG	2 cut(s)	411, 626
MaeII	ACGT	1 cut(s)	1044
MalI	GATC	2 cut(s)	531, 831
MboI	GATC	2 cut(s)	529, 829
MflI	RGATCY	1 cut(s)	529
MmeI	TCCRAC	1 cut(s)	543
MnlI	CCTC	9 cut(s)	197, 423, 572, 751, 844, 911, 914, 1001, 1052
Mph1103I	ATGCAT	1 cut(s)	60
MroXI	GAANNNNTTC	1 cut(s)	501
MseI	TTAA	4 cut(s)	249, 405, 861, 1053
MslI	CAYNNNNRTG	1 cut(s)	766
MspI	CCGG	1 cut(s)	96
MspR9I	CCNGG	2 cut(s)	381, 939
MvaI	CCWGG	2 cut(s)	381, 939
MvnI	CGCG	2 cut(s)	462, 1034
MwoI	GCNNNNNNNGC	3 cut(s)	407, 680, 1033
NdeII	GATC	2 cut(s)	529, 829
NlaIII	CATG	7 cut(s)	62, 213, 478, 671, 845, 871, 1066
NmeAIII	GCCGAG	2 cut(s)	48, 248
NsbI	TGCGCA	1 cut(s)	178
NsiI	ATGCAT	1 cut(s)	60
NspI	RCATGY	2 cut(s)	671, 1066
NspV	TTCGAA	1 cut(s)	521
PaeI	GCATGC	1 cut(s)	1066
PagI	TCATGA	1 cut(s)	841
PcsI	WCGNNNNNNNCGW	1 cut(s)	518
PdmI	GAANNNNTTC	1 cut(s)	501
PfeI	GAWTC	2 cut(s)	509, 781
PflMI	CCANNNNNTGG	1 cut(s)	873
PfoI	TCCNGGA	1 cut(s)	379
PkrI	GCNGC	1 cut(s)	673
Ppu21I	YACGTR	1 cut(s)	1045
Psp6I	CCWGG	2 cut(s)	379, 937
PspFI	CCCAGC	1 cut(s)	307
PspGI	CCWGG	2 cut(s)	379, 937
PspPI	GGNCC	1 cut(s)	876
PsrI	GAACNNNNNNTAC	2 cut(s)	376, 408
PsuI	RGATCY	1 cut(s)	529
RsaI	GTAC	1 cut(s)	822
RsaNI	GTAC	1 cut(s)	821
RseI	CAYNNNNRTG	1 cut(s)	766
SaqAI	TTAA	4 cut(s)	249, 405, 861, 1053
SatI	GCNGC	1 cut(s)	672
Sau3AI	GATC	2 cut(s)	529, 829
Sau96I	GGNCC	1 cut(s)	876
ScrFI	CCNGG	2 cut(s)	381, 939
SetI	ASST	7 cut(s)	137, 163, 189, 801, 960, 1004, 1047
SfaNI	GCATC	2 cut(s)	45, 300
SfcI	CTRYAG	1 cut(s)	997
SfuI	TTCGAA	1 cut(s)	521
SinI	GGWCC	1 cut(s)	876
SmiMI	CAYNNNNRTG	1 cut(s)	766
SmlI	CTYRAG	2 cut(s)	286, 656
SmoI	CTYRAG	2 cut(s)	286, 656
SphI	GCATGC	1 cut(s)	1066
SsiI	CCGC	1 cut(s)	374
SspI	AATATT	2 cut(s)	77, 255
SspMI	CTAG	2 cut(s)	411, 626
StyD4I	CCNGG	2 cut(s)	379, 937
TaiI	ACGT	1 cut(s)	1047
TaqI	TCGA	5 cut(s)	155, 197, 231, 512, 521
TaqII	GACCGA	1 cut(s)	893
TatI	WGTACW	1 cut(s)	820
TfiI	GAWTC	2 cut(s)	509, 781
Tru1I	TTAA	4 cut(s)	249, 405, 861, 1053
Tru9I	TTAA	4 cut(s)	249, 405, 861, 1053
TscAI	CASTG	2 cut(s)	179, 271
TseI	GCWGC	1 cut(s)	671
TspRI	CASTG	2 cut(s)	179, 271
Van91I	CCANNNNNTGG	1 cut(s)	873
VpaK11BI	GGWCC	1 cut(s)	876
XapI	RAATTY	5 cut(s)	102, 233, 734, 857, 1088
XceI	RCATGY	2 cut(s)	671, 1066
XmnI	GAANNNNTTC	1 cut(s)	501
XspI	CTAG	2 cut(s)	411, 626
Zsp2I	ATGCAT	1 cut(s)	60

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.