FvH4_6g40310

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
31806206 .. 31810118
3913 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40310.t1

Sequence Viewer

Length: 1470 bp
ATGGCCGGAAGCAGCACTTTTTGGCTGCTTATTCTGGTTGTTATGTTCTTCATCTTTCTTGTGGGTCGTCTCATTCTGAACCAGTACTCACCCTTGTTCTTAAGGGTTGGTCCTACTACACTGCCTAAAGGCTCTTTCGGGTGGCCCGTTTTGGGTGAAACTCTTGCCTTCTTGAACCCCCATCCTTCTAATTCTCTTGGAGCTTTCCTTCAGTACCATTGCTCTAGGTATGGGAAGGTGTTCAAATCCCATTTGTTCTTGTCCCCAACCATTGTGTCCTGTGATGAAGAGCTGAACTACTTCATACTTCAGAATGAAGGTAAGTTGTTCGAATGTAGCTACCCGAAACCCATCCATGGCATTCTCGGCAAGTCCTCAATGCTGGTGGCTGTTGGTGACACTCACAAAAGGCTTAGAAGTGTGGCCGTCTCTCTGGTCACCATTACCAAATCCAAGCCTGAGTTTCTCCACGACATCGAGAACACTGCGATTCGCGTTCTTCGCTCGTGGAAAGATAAACCACAAGTCATCTTCTGCAAAGAAGCTAGAAAGTTCACATTCAATGTAATAGTGAAACAAGTGCTAGGTTTGAGCCCAGATGAGCCACAGACTACACAAATTCTTGAAGATTTTCTGACTTTCATGAAAGGGCTCATCTCTCTCCCTCTCTACATTCCTGGAACTCCTTATGCAAGAGCTGTGAAGGCTAGAATTAGGATATCTGCAACTGTGAAAGCAATCATAGAGGAAAGAAGAAGAAGAAGAAGAAATGAAGATGGGATTATCACTAAGAACAAGTCTACTACTAGAAGTAATAGTGATTTTCTTGAGATACTTCTGGATGTTGATACCTTATCTGAAGATGAAAAAGTGAGTTTCGTCTTGGATTCTCTTTTGGGTGGCTATGAGACTACCTCTTTGTTAATGGCCATGGTTGTTTATTTTCTAGCTCAATCACCCTCTGCATTACAACAAGTAAAGGTTGAGCATCAGAATATTAGAAGGGTGAAGAAGAAAGATGAGTATCTGAACTGGGAAGACTATAACAAAATGGAGTTTACTCAAAATGTCATAAACGAAGCTATGAGATGTGGGAACATTGTAAAATTTGTGCACCGAAAGGCTCTCAAAGATGTGAAATTCAGAGATTATATAATTCCTTCAGGCTGGAAAGTTCTACCCGTCATTAGTGCTTCTCATTTGGACTCTTCTCTTCATGCAAATGCTCTTCAGTTTCATCCTTGGAGATGGGAGAGCGAAGATCAAATTTGCAAGAGATTCACTCCCTTTGGTGGAGGGTCTAGATGCTGTCCGGGATCTGAACTTGGCAGGCTTGAAGTTGCATTTTTTCTCCACCACCTTGTACAAAATTTCAGGTGGAGGACTGAGAATGATGAGCAACCTATGGCTTATCCGTACGTAGAATTCAAAAGAGGCTTGCCAATTTACCTGGAGCATTGCCCCATTTGA

Protein Analysis

490

Amino Acids

56.13

Weight (kDa)

9.2

Isoelectric Point (pI)

52.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 468 1.4e-59 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 800
AccII CGCG 1 cut(s) 495
AclWI GGATC 1 cut(s) 1324
AcoI YGGCCR 3 cut(s) 3, 423, 927
AcsI RAATTY 6 cut(s) 618, 1106, 1139, 1266, 1369, 1424
AcuI CTGAAG 5 cut(s) 194, 293, 879, 1146, 1214
AfaI GTAC 4 cut(s) 86, 215, 1365, 1418
AfiI CCNNNNNNNGG 3 cut(s) 152, 356, 1292
AflII CTTAAG 1 cut(s) 100
AgsI TTSAA 6 cut(s) 175, 244, 562, 626, 1337, 1429
AjnI CCWGG 2 cut(s) 676, 1449
AluBI AGCT 7 cut(s) 203, 292, 339, 545, 698, 950, 1082
AluI AGCT 7 cut(s) 203, 292, 339, 545, 698, 950, 1082
Alw21I GWGCWC 1 cut(s) 1116
Alw26I GTCTC 3 cut(s) 74, 433, 902
Alw44I GTGCAC 1 cut(s) 1112
AlwI GGATC 1 cut(s) 1324
AoxI GGCC 4 cut(s) 3, 143, 423, 927
ApaLI GTGCAC 1 cut(s) 1112
ApeKI GCWGC 2 cut(s) 12, 25
ApoI RAATTY 6 cut(s) 618, 1106, 1139, 1266, 1369, 1424
ArsI GACNNNNNNTTYG 2 cut(s) 901, 933
Asp700I GAANNNNTTC 3 cut(s) 239, 299, 630
AspS9I GGNCC 2 cut(s) 110, 144
AsuC2I CCSGG 1 cut(s) 1314
AsuHPI GGTGA 6 cut(s) 81, 167, 407, 430, 948, 1018
AsuII TTCGAA 1 cut(s) 330
AvaII GGWCC 1 cut(s) 110
BaeGI GKGCMC 1 cut(s) 1116
BalI TGGCCA 1 cut(s) 929
BanII GRGCYC 2 cut(s) 596, 654
BauI CACGAG 1 cut(s) 505
BbsI GAAGAC 1 cut(s) 1044
Bbv12I GWGCWC 1 cut(s) 1116
BbvI GCAGC 2 cut(s) 12, 24
BccI CCATC 4 cut(s) 189, 359, 770, 1242
BceAI ACGGC 1 cut(s) 410
BcgI CGANNNNNNTGC 2 cut(s) 467, 501
BciT130I CCWGG 2 cut(s) 678, 1451
BcnI CCSGG 1 cut(s) 1314
BcoDI GTCTC 3 cut(s) 74, 433, 902
BfaI CTAG 7 cut(s) 225, 546, 584, 708, 807, 947, 1302
BfrI CTTAAG 1 cut(s) 100
BisI GCNGC 2 cut(s) 13, 26
BlsI GCNGC 2 cut(s) 14, 27
BmcAI AGTACT 1 cut(s) 86
Bme1390I CCNGG 3 cut(s) 678, 1314, 1451
Bme18I GGWCC 1 cut(s) 110
BmgT120I GGNCC 2 cut(s) 110, 144
BmrFI CCNGG 3 cut(s) 678, 1314, 1451
BmrI ACTGGG 1 cut(s) 1042
BmsI GCATC 2 cut(s) 997, 1295
BmuI ACTGGG 1 cut(s) 1042
BpiI GAAGAC 1 cut(s) 1044
BplI GAGNNNNNCTC 4 cut(s) 899, 931, 1267, 1299
Bpu14I TTCGAA 1 cut(s) 330
BpuEI CTTGAG 1 cut(s) 848
BpuMI CCSGG 1 cut(s) 1314
BsaAI YACGTR 1 cut(s) 1420
BsaBI GATNNNNATC 1 cut(s) 1023
BsaJI CCNNGG 3 cut(s) 355, 930, 1241
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 356, 1292
Bse1I ACTGG 2 cut(s) 82, 1037
Bse3DI GCAATG 2 cut(s) 217, 1456
Bse8I GATNNNNATC 1 cut(s) 1023
BseBI CCWGG 2 cut(s) 678, 1451
BseDI CCNNGG 3 cut(s) 355, 930, 1241
BseGI GGATG 4 cut(s) 181, 351, 847, 1237
BseJI GATNNNNATC 1 cut(s) 1023
BseLI CCNNNNNNNGG 3 cut(s) 152, 356, 1292
BseMI GCAATG 2 cut(s) 217, 1456
BseMII CTCAG 2 cut(s) 450, 1377
BseNI ACTGG 2 cut(s) 82, 1037
BseSI GKGCMC 1 cut(s) 1116
BseXI GCAGC 2 cut(s) 12, 24
Bsh1236I CGCG 1 cut(s) 495
BshFI GGCC 4 cut(s) 5, 145, 425, 929
BsiHKAI GWGCWC 1 cut(s) 1116
BsiSI CCGG 2 cut(s) 6, 1313
BsiWI CGTACG 1 cut(s) 1416
BslFI GGGAC 1 cut(s) 247
BslI CCNNNNNNNGG 3 cut(s) 152, 356, 1292
BsmAI GTCTC 3 cut(s) 74, 433, 902
BsmBI CGTCTC 2 cut(s) 74, 433
BsmFI GGGAC 1 cut(s) 247
BsmI GAATGC 1 cut(s) 360
BsnI GGCC 4 cut(s) 5, 145, 425, 929
Bsp119I TTCGAA 1 cut(s) 330
Bsp1286I GDGCHC 3 cut(s) 596, 654, 1116
Bsp1407I TGTACA 1 cut(s) 1363
Bsp143I GATC 2 cut(s) 1261, 1316
Bsp19I CCATGG 2 cut(s) 355, 930
BspANI GGCC 4 cut(s) 5, 145, 425, 929
BspCNI CTCAG 2 cut(s) 451, 1378
BspFNI CGCG 1 cut(s) 495
BspHI TCATGA 1 cut(s) 642
BspPI GGATC 1 cut(s) 1324
BspQI GCTCTTC 2 cut(s) 282, 1233
BspT104I TTCGAA 1 cut(s) 330
BspTI CTTAAG 1 cut(s) 100
BsrDI GCAATG 2 cut(s) 217, 1456
BsrGI TGTACA 1 cut(s) 1363
BsrI ACTGG 2 cut(s) 82, 1037
BssECI CCNNGG 3 cut(s) 355, 930, 1241
BssMI GATC 2 cut(s) 1261, 1316
BssSI CACGAG 1 cut(s) 505
BssT1I CCWWGG 3 cut(s) 355, 930, 1241
Bst2BI CACGAG 1 cut(s) 505
Bst2UI CCWGG 2 cut(s) 678, 1451
Bst4CI ACNGT 1 cut(s) 730
Bst6I CTCTTC 4 cut(s) 282, 1213, 1218, 1233
BstAFI CTTAAG 1 cut(s) 100
BstAUI TGTACA 1 cut(s) 1363
BstBAI YACGTR 1 cut(s) 1420
BstBI TTCGAA 1 cut(s) 330
BstC8I GCNNGC 2 cut(s) 1331, 1439
BstDEI CTNAG 4 cut(s) 413, 459, 789, 1386
BstDSI CCRYGG 2 cut(s) 355, 930
BstEII GGTNACC 1 cut(s) 436
BstF5I GGATG 4 cut(s) 181, 351, 847, 1237
BstFNI CGCG 1 cut(s) 495
BstKTI GATC 2 cut(s) 1264, 1319
BstMAI GTCTC 3 cut(s) 74, 433, 902
BstMBI GATC 2 cut(s) 1261, 1316
BstMWI GCNNNNNNNGC 3 cut(s) 366, 501, 704
BstNI CCWGG 2 cut(s) 678, 1451
BstPI GGTNACC 1 cut(s) 436
BstSCI CCNGG 3 cut(s) 676, 1312, 1449
BstSLI GKGCMC 1 cut(s) 1116
BstSNI TACGTA 1 cut(s) 1420
BstUI CGCG 1 cut(s) 495
BstV1I GCAGC 2 cut(s) 12, 24
BstV2I GAAGAC 1 cut(s) 1044
BstX2I RGATCY 1 cut(s) 1316
BstYI RGATCY 1 cut(s) 1316
BsuRI GGCC 4 cut(s) 5, 145, 425, 929
BtgI CCRYGG 2 cut(s) 355, 930
BtsCI GGATG 4 cut(s) 181, 351, 847, 1237
BtsI GCAGTG 2 cut(s) 119, 483
BtsIMutI CAGTG 2 cut(s) 119, 483
Cac8I GCNNGC 2 cut(s) 1331, 1439
CciI TCATGA 1 cut(s) 642
Cfr13I GGNCC 2 cut(s) 110, 144
Csp6I GTAC 4 cut(s) 85, 214, 1364, 1417
CspCI CAANNNNNGTGG 2 cut(s) 366, 401
CviAII CATG 4 cut(s) 356, 643, 931, 1217
CviQI GTAC 4 cut(s) 85, 214, 1364, 1417
DdeI CTNAG 4 cut(s) 413, 459, 789, 1386
DpnI GATC 2 cut(s) 1263, 1318
DpnII GATC 2 cut(s) 1261, 1316
EaeI YGGCCR 3 cut(s) 3, 423, 927
Eam1104I CTCTTC 4 cut(s) 282, 1213, 1218, 1233
EarI CTCTTC 4 cut(s) 282, 1213, 1218, 1233
Eco105I TACGTA 1 cut(s) 1420
Eco130I CCWWGG 3 cut(s) 355, 930, 1241
Eco24I GRGCYC 2 cut(s) 596, 654
Eco32I GATATC 1 cut(s) 720
Eco47I GGWCC 1 cut(s) 110
Eco57I CTGAAG 5 cut(s) 194, 293, 879, 1146, 1214
Eco91I GGTNACC 1 cut(s) 436
EcoO65I GGTNACC 1 cut(s) 436
EcoRI GAATTC 1 cut(s) 1424
EcoRII CCWGG 2 cut(s) 676, 1449
EcoRV GATATC 1 cut(s) 720
EcoT14I CCWWGG 3 cut(s) 355, 930, 1241
EcoT38I GRGCYC 2 cut(s) 596, 654
ErhI CCWWGG 3 cut(s) 355, 930, 1241
Esp3I CGTCTC 2 cut(s) 74, 433
FaeI CATG 4 cut(s) 359, 646, 934, 1220
FalI AAGNNNNNCTT 1 cut(s) 33
FaqI GGGAC 1 cut(s) 247
FatI CATG 4 cut(s) 355, 642, 930, 1216
FblI GTMKAC 1 cut(s) 800
Fnu4HI GCNGC 2 cut(s) 13, 26
FokI GGATG 4 cut(s) 168, 338, 854, 1224
FriOI GRGCYC 2 cut(s) 596, 654
Fsp4HI GCNGC 2 cut(s) 13, 26
FspBI CTAG 7 cut(s) 225, 546, 584, 708, 807, 947, 1302
GluI GCNGC 2 cut(s) 13, 26
HaeIII GGCC 4 cut(s) 5, 145, 425, 929
HapII CCGG 2 cut(s) 6, 1313
Hin1II CATG 4 cut(s) 359, 646, 934, 1220
HinfI GANTC 4 cut(s) 490, 887, 1205, 1278
HpaII CCGG 2 cut(s) 6, 1313
HphI GGTGA 6 cut(s) 81, 167, 407, 430, 948, 1018
Hpy166II GTNNAC 4 cut(s) 555, 801, 1059, 1114
Hpy188I TCNGA 8 cut(s) 78, 312, 636, 859, 993, 1029, 1145, 1321
Hpy188III TCNNGA 7 cut(s) 172, 478, 623, 643, 827, 839, 1302
Hpy8I GTNNAC 4 cut(s) 555, 801, 1059, 1114
HpyAV CCTTC 8 cut(s) 178, 195, 218, 229, 311, 697, 996, 1170
HpyCH4III ACNGT 1 cut(s) 730
HpyCH4IV ACGT 1 cut(s) 1419
HpyCH4V TGCA 8 cut(s) 537, 692, 725, 965, 1114, 1220, 1272, 1343
HpyF10VI GCNNNNNNNGC 3 cut(s) 366, 501, 704
HpyF3I CTNAG 4 cut(s) 413, 459, 789, 1386
HpySE526I ACGT 1 cut(s) 1419
Hsp92II CATG 4 cut(s) 359, 646, 934, 1220
Kzo9I GATC 2 cut(s) 1261, 1316
LguI GCTCTTC 2 cut(s) 282, 1233
LmnI GCTCC 2 cut(s) 200, 1453
Lsp1109I GCAGC 2 cut(s) 12, 24
LweI GCATC 2 cut(s) 997, 1295
MaeI CTAG 7 cut(s) 225, 546, 584, 708, 807, 947, 1302
MaeII ACGT 1 cut(s) 1419
MaeIII GTNAC 2 cut(s) 395, 436
MalI GATC 2 cut(s) 1263, 1318
MboI GATC 2 cut(s) 1261, 1316
MflI RGATCY 1 cut(s) 1316
MhlI GDGCHC 3 cut(s) 596, 654, 1116
MlsI TGGCCA 1 cut(s) 929
MluNI TGGCCA 1 cut(s) 929
MlyI GAGTC 1 cut(s) 1199
MnlI CCTC 8 cut(s) 385, 675, 739, 925, 970, 1289, 1374, 1427
Mox20I TGGCCA 1 cut(s) 929
MroXI GAANNNNTTC 3 cut(s) 239, 299, 630
MscI TGGCCA 1 cut(s) 929
MseI TTAA 2 cut(s) 101, 923
MslI CAYNNNNRTG 1 cut(s) 1221
Msp20I TGGCCA 1 cut(s) 929
MspCI CTTAAG 1 cut(s) 100
MspI CCGG 2 cut(s) 6, 1313
MspR9I CCNGG 3 cut(s) 678, 1314, 1451
Mva1269I GAATGC 1 cut(s) 360
MvaI CCWGG 2 cut(s) 678, 1451
MvnI CGCG 1 cut(s) 495
MwoI GCNNNNNNNGC 3 cut(s) 366, 501, 704
NciI CCSGG 1 cut(s) 1314
NcoI CCATGG 2 cut(s) 355, 930
NdeII GATC 2 cut(s) 1261, 1316
NlaIII CATG 4 cut(s) 359, 646, 934, 1220
NmeAIII GCCGAG 1 cut(s) 345
NmuCI GTSAC 2 cut(s) 395, 436
NspV TTCGAA 1 cut(s) 330
PagI TCATGA 1 cut(s) 642
PciSI GCTCTTC 2 cut(s) 282, 1233
PcsI WCGNNNNNNNCGW 1 cut(s) 144
PctI GAATGC 1 cut(s) 360
PdmI GAANNNNTTC 3 cut(s) 239, 299, 630
PfeI GAWTC 3 cut(s) 490, 887, 1278
Pfl23II CGTACG 1 cut(s) 1416
PfoI TCCNGGA 2 cut(s) 676, 1312
PkrI GCNGC 2 cut(s) 14, 27
PleI GAGTC 1 cut(s) 1199
PpsI GAGTC 1 cut(s) 1199
Ppu21I YACGTR 1 cut(s) 1420
Psp6I CCWGG 2 cut(s) 676, 1449
PspEI GGTNACC 1 cut(s) 436
PspGI CCWGG 2 cut(s) 676, 1449
PspLI CGTACG 1 cut(s) 1416
PspPI GGNCC 2 cut(s) 110, 144
PsuI RGATCY 1 cut(s) 1316
RsaI GTAC 4 cut(s) 86, 215, 1365, 1418
RsaNI GTAC 4 cut(s) 85, 214, 1364, 1417
RseI CAYNNNNRTG 1 cut(s) 1221
SapI GCTCTTC 2 cut(s) 282, 1233
SaqAI TTAA 2 cut(s) 101, 923
SatI GCNGC 2 cut(s) 13, 26
Sau3AI GATC 2 cut(s) 1261, 1316
Sau96I GGNCC 2 cut(s) 110, 144
ScaI AGTACT 1 cut(s) 86
SchI GAGTC 1 cut(s) 1199
ScrFI CCNGG 3 cut(s) 678, 1314, 1451
SduI GDGCHC 3 cut(s) 596, 654, 1116
SfaNI GCATC 2 cut(s) 997, 1295
SfuI TTCGAA 1 cut(s) 330
SinI GGWCC 1 cut(s) 110
SmiMI CAYNNNNRTG 1 cut(s) 1221
SmlI CTYRAG 2 cut(s) 100, 827
SmoI CTYRAG 2 cut(s) 100, 827
SnaBI TACGTA 1 cut(s) 1420
SspI AATATT 1 cut(s) 997
SspMI CTAG 7 cut(s) 225, 546, 584, 708, 807, 947, 1302
StyD4I CCNGG 3 cut(s) 676, 1312, 1449
StyI CCWWGG 3 cut(s) 355, 930, 1241
TaaI ACNGT 1 cut(s) 730
TaiI ACGT 1 cut(s) 1422
TaqI TCGA 2 cut(s) 330, 477
TatI WGTACW 2 cut(s) 84, 1363
TfiI GAWTC 3 cut(s) 490, 887, 1278
Tru1I TTAA 2 cut(s) 101, 923
Tru9I TTAA 2 cut(s) 101, 923
TscAI CASTG 2 cut(s) 126, 490
TseFI GTSAC 2 cut(s) 395, 436
TseI GCWGC 2 cut(s) 12, 25
Tsp45I GTSAC 2 cut(s) 395, 436
TspGWI ACGGA 1 cut(s) 1404
TspRI CASTG 2 cut(s) 126, 490
Vha464I CTTAAG 1 cut(s) 100
VneI GTGCAC 1 cut(s) 1112
VpaK11BI GGWCC 1 cut(s) 110
XapI RAATTY 6 cut(s) 618, 1106, 1139, 1266, 1369, 1424
XbaI TCTAGA 1 cut(s) 1301
XmiI GTMKAC 1 cut(s) 800
XmnI GAANNNNTTC 3 cut(s) 239, 299, 630
XspI CTAG 7 cut(s) 225, 546, 584, 708, 807, 947, 1302
ZrmI AGTACT 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.