Rh2DG533700

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
76377246 .. 76380304
3059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG533700.1

Sequence Viewer

Length: 1467 bp
ATGGCTGGAAGTAGTACTTTTTGGCTGCTTGTTCTGGTTGGTATGTTCTTCATCTTTCTTTTGGGTCGTCTCATTCTGAACCAGTACTCACCCTTGTTCTTAAGGGTTGGTCCTACTACACCTAAAGGCTCTTTCGGGTGGCCTGTTTTGGGTGAAACTCTTGCCTTCTTGAACCCTCATCCTTCTAATTCTCTTGGAGCTTTCCTTCAACACCATTGCTCTAGGTATGGGAAAGTGTTCAAATCCCATTTGTTCTTGTCCCCAACGATTGTGTCCTGTGACGAAGAGCTGAACTACTTCATACTTCAGAATGAAGGCAAGTTGTTTGAATGTAGCTACCCGAAACCCATCCATGGCATTCTCGGCAAGTCCTCAATGCTGGTGGCTGTGGGTGACACTCACAAAAGGCTCAGAAATGTGGCCGTCTCTCTGGTCACCATTACCAAATCCAAGCCTGAGTTTCTCCACGACATCGAGAACACTGCAGTTCGCGTTCTTCGGTCGTGGAAAGATAAACCACAAGTCATCTTCTGTAAAGAAGCTAGAAAGTTCACATTCAATGTAATAGTGAAGCAAGTGCTAGGTTTGAGCCCAGATGAGCCACAGACCACACAAATTCTTGAAGATTTTCTGACTTTCATGAAAGGGCTCATTTCTCTCCCTCTCTACATTCCTGGAACTCCTTATGCAAGAGCTGTGAAGGCTAGAATTAGGATATCTTCAACTGTGAAAGCAATCATAGAGGAAAGAAGAAGAAGAAGAACAAGAAGAAATGAAGATGGGATTAGTACTAATAAGTCTAGTAGTAGTAATAGTGATTTTCTTGAGATACTTCTGGATGTTGATACCTTATCTGAAGATGAAAAAGTGAGTTTCGTCTTGGATTCTCTACTGGGTGGGTACGAGACTACCTCTCTATTAATGGCCATGGTTGTTTATTTTCTAGCTCAATCACCCTCTGCATTACAACAATTGAAGGTTGAGCATCAGAATATTAGAAGGGTGAAGAAGAAAGATGAGTATTTGAACTGGGAAGACTATAGCAAAATGGAATTTACTCAAAACGTCATAAACGAAGCTATGAGATGTGGGAACATTGTAAAATTTGTGCACCGAAAGGCTCTCAAAGATGTGAAATTTAGAGATTATAAAATTCCATCAGGCTGGAAAGTTCTACCCGTCATTAGTGCTTCTCATTTGGACCCTTCTCTTCATGCAAATGCTCTCGAGTTTCATCCTTGGAGATGGGAGAGCGAAGATCAAATGTGCAAGAGATTCACTCCCTTTGGTGGAGGGTCTAGATGCTGTCCAGGATCTGAACTTGGGAGGCTTGAGGTTGCATTTTTTCTCCACCACCTTGTACAAAATTTCAGGTGGAGGACTGAGGATGATGAGCAACCTATAGCTTATCCGTACGTAGAATTCAAAAGAGGGTTGCCACTTTACTTGGAGGATTGCCCCATTTGA

Protein Analysis

488

Amino Acids

55.89

Weight (kDa)

9.02

Isoelectric Point (pI)

50.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 467 5.5e-60 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1149
AccII CGCG 1 cut(s) 492
AclWI GGATC 1 cut(s) 1321
AcoI YGGCCR 2 cut(s) 420, 924
AcsI RAATTY 7 cut(s) 615, 1052, 1103, 1136, 1152, 1366, 1421
AcuI CTGAAG 2 cut(s) 290, 876
AfaI GTAC 6 cut(s) 16, 86, 790, 902, 1362, 1415
AfiI CCNNNNNNNGG 3 cut(s) 149, 353, 1289
AflII CTTAAG 1 cut(s) 100
AjnI CCWGG 2 cut(s) 673, 1309
AluBI AGCT 8 cut(s) 200, 289, 336, 542, 695, 947, 1079, 1406
AluI AGCT 8 cut(s) 200, 289, 336, 542, 695, 947, 1079, 1406
Alw21I GWGCWC 1 cut(s) 1113
Alw26I GTCTC 3 cut(s) 74, 430, 899
Alw44I GTGCAC 1 cut(s) 1109
AlwI GGATC 1 cut(s) 1321
AlwNI CAGNNNCTG 1 cut(s) 1316
Ama87I CYCGRG 1 cut(s) 1226
AoxI GGCC 3 cut(s) 140, 420, 924
ApaLI GTGCAC 1 cut(s) 1109
ApeKI GCWGC 1 cut(s) 25
ApoI RAATTY 7 cut(s) 615, 1052, 1103, 1136, 1152, 1366, 1421
AseI ATTAAT 1 cut(s) 920
Asp700I GAANNNNTTC 3 cut(s) 236, 296, 627
AspS9I GGNCC 2 cut(s) 110, 1201
AsuHPI GGTGA 6 cut(s) 81, 164, 404, 427, 945, 1015
AvaI CYCGRG 1 cut(s) 1226
AvaII GGWCC 2 cut(s) 110, 1201
BaeGI GKGCMC 1 cut(s) 1113
BalI TGGCCA 1 cut(s) 926
BanII GRGCYC 2 cut(s) 593, 651
BbsI GAAGAC 1 cut(s) 1041
Bbv12I GWGCWC 1 cut(s) 1113
BbvI GCAGC 1 cut(s) 12
BccI CCATC 4 cut(s) 356, 773, 1165, 1239
BceAI ACGGC 1 cut(s) 407
BcgI CGANNNNNNTGC 2 cut(s) 464, 498
BciT130I CCWGG 2 cut(s) 675, 1311
BcoDI GTCTC 3 cut(s) 74, 430, 899
BfaI CTAG 7 cut(s) 222, 543, 581, 705, 801, 944, 1299
BfmI CTRYAG 3 cut(s) 483, 1039, 1401
BfrI CTTAAG 1 cut(s) 100
BisI GCNGC 1 cut(s) 26
BlsI GCNGC 1 cut(s) 27
BmcAI AGTACT 3 cut(s) 16, 86, 790
Bme1390I CCNGG 2 cut(s) 675, 1311
Bme18I GGWCC 2 cut(s) 110, 1201
BmeT110I CYCGRG 1 cut(s) 1226
BmgT120I GGNCC 2 cut(s) 110, 1201
BmiI GGNNCC 1 cut(s) 1203
BmrFI CCNGG 2 cut(s) 675, 1311
BmrI ACTGGG 2 cut(s) 902, 1039
BmsI GCATC 2 cut(s) 994, 1292
BmuI ACTGGG 2 cut(s) 902, 1039
BpiI GAAGAC 1 cut(s) 1041
BplI GAGNNNNNCTC 4 cut(s) 896, 928, 1264, 1296
BpuEI CTTGAG 2 cut(s) 845, 1352
BsaAI YACGTR 1 cut(s) 1417
BsaJI CCNNGG 3 cut(s) 352, 927, 1238
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 353, 1289
Bse1I ACTGG 3 cut(s) 82, 897, 1034
Bse3DI GCAATG 1 cut(s) 214
BseBI CCWGG 2 cut(s) 675, 1311
BseDI CCNNGG 3 cut(s) 352, 927, 1238
BseGI GGATG 5 cut(s) 178, 348, 844, 1234, 1393
BseLI CCNNNNNNNGG 3 cut(s) 149, 353, 1289
BseMI GCAATG 1 cut(s) 214
BseMII CTCAG 3 cut(s) 424, 447, 1374
BseNI ACTGG 3 cut(s) 82, 897, 1034
BseSI GKGCMC 1 cut(s) 1113
BseXI GCAGC 1 cut(s) 12
Bsh1236I CGCG 1 cut(s) 492
Bsh1285I CGRYCG 1 cut(s) 503
BshFI GGCC 3 cut(s) 142, 422, 926
BsiEI CGRYCG 1 cut(s) 503
BsiHKAI GWGCWC 1 cut(s) 1113
BsiHKCI CYCGRG 1 cut(s) 1226
BsiWI CGTACG 1 cut(s) 1413
BslFI GGGAC 1 cut(s) 244
BslI CCNNNNNNNGG 3 cut(s) 149, 353, 1289
BsmAI GTCTC 3 cut(s) 74, 430, 899
BsmBI CGTCTC 2 cut(s) 74, 430
BsmFI GGGAC 1 cut(s) 244
BsmI GAATGC 1 cut(s) 357
BsnI GGCC 3 cut(s) 142, 422, 926
BsoBI CYCGRG 1 cut(s) 1226
Bsp1286I GDGCHC 3 cut(s) 593, 651, 1113
Bsp1407I TGTACA 1 cut(s) 1360
Bsp143I GATC 2 cut(s) 1258, 1313
Bsp19I CCATGG 2 cut(s) 352, 927
BspANI GGCC 3 cut(s) 142, 422, 926
BspCNI CTCAG 3 cut(s) 423, 448, 1375
BspFNI CGCG 1 cut(s) 492
BspHI TCATGA 1 cut(s) 639
BspLI GGNNCC 1 cut(s) 1203
BspMAI CTGCAG 1 cut(s) 487
BspPI GGATC 1 cut(s) 1321
BspQI GCTCTTC 1 cut(s) 279
BspTI CTTAAG 1 cut(s) 100
BsrDI GCAATG 1 cut(s) 214
BsrGI TGTACA 1 cut(s) 1360
BsrI ACTGG 3 cut(s) 82, 897, 1034
BssECI CCNNGG 3 cut(s) 352, 927, 1238
BssMI GATC 2 cut(s) 1258, 1313
BssT1I CCWWGG 3 cut(s) 352, 927, 1238
Bst2UI CCWGG 2 cut(s) 675, 1311
Bst4CI ACNGT 1 cut(s) 727
Bst6I CTCTTC 2 cut(s) 279, 1215
BstAFI CTTAAG 1 cut(s) 100
BstAUI TGTACA 1 cut(s) 1360
BstBAI YACGTR 1 cut(s) 1417
BstDEI CTNAG 3 cut(s) 410, 456, 1383
BstDSI CCRYGG 2 cut(s) 352, 927
BstEII GGTNACC 1 cut(s) 433
BstF5I GGATG 5 cut(s) 178, 348, 844, 1234, 1393
BstFNI CGCG 1 cut(s) 492
BstKTI GATC 2 cut(s) 1261, 1316
BstMAI GTCTC 3 cut(s) 74, 430, 899
BstMBI GATC 2 cut(s) 1258, 1313
BstMCI CGRYCG 1 cut(s) 503
BstMWI GCNNNNNNNGC 2 cut(s) 363, 701
BstNI CCWGG 2 cut(s) 675, 1311
BstPI GGTNACC 1 cut(s) 433
BstSCI CCNGG 2 cut(s) 673, 1309
BstSFI CTRYAG 3 cut(s) 483, 1039, 1401
BstSLI GKGCMC 1 cut(s) 1113
BstSNI TACGTA 1 cut(s) 1417
BstUI CGCG 1 cut(s) 492
BstV1I GCAGC 1 cut(s) 12
BstV2I GAAGAC 1 cut(s) 1041
BstX2I RGATCY 1 cut(s) 1313
BstXI CCANNNNNNTGG 1 cut(s) 1164
BstYI RGATCY 1 cut(s) 1313
BsuRI GGCC 3 cut(s) 142, 422, 926
BtgI CCRYGG 2 cut(s) 352, 927
BtsCI GGATG 5 cut(s) 178, 348, 844, 1234, 1393
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 1 cut(s) 480
CaiI CAGNNNCTG 1 cut(s) 1316
CciI TCATGA 1 cut(s) 639
Cfr13I GGNCC 2 cut(s) 110, 1201
Csp6I GTAC 6 cut(s) 15, 85, 789, 901, 1361, 1414
CspCI CAANNNNNGTGG 4 cut(s) 363, 398, 1428, 1463
CviAII CATG 4 cut(s) 353, 640, 928, 1214
CviQI GTAC 6 cut(s) 15, 85, 789, 901, 1361, 1414
DdeI CTNAG 3 cut(s) 410, 456, 1383
DpnI GATC 2 cut(s) 1260, 1315
DpnII GATC 2 cut(s) 1258, 1313
EaeI YGGCCR 2 cut(s) 420, 924
Eam1104I CTCTTC 2 cut(s) 279, 1215
EarI CTCTTC 2 cut(s) 279, 1215
Eco105I TACGTA 1 cut(s) 1417
Eco130I CCWWGG 3 cut(s) 352, 927, 1238
Eco24I GRGCYC 2 cut(s) 593, 651
Eco32I GATATC 1 cut(s) 717
Eco47I GGWCC 2 cut(s) 110, 1201
Eco57I CTGAAG 2 cut(s) 290, 876
Eco88I CYCGRG 1 cut(s) 1226
Eco91I GGTNACC 1 cut(s) 433
EcoO65I GGTNACC 1 cut(s) 433
EcoRI GAATTC 1 cut(s) 1421
EcoRII CCWGG 2 cut(s) 673, 1309
EcoRV GATATC 1 cut(s) 717
EcoT14I CCWWGG 3 cut(s) 352, 927, 1238
EcoT38I GRGCYC 2 cut(s) 593, 651
ErhI CCWWGG 3 cut(s) 352, 927, 1238
Esp3I CGTCTC 2 cut(s) 74, 430
FaeI CATG 4 cut(s) 356, 643, 931, 1217
FalI AAGNNNNNCTT 1 cut(s) 33
FaqI GGGAC 1 cut(s) 244
FatI CATG 4 cut(s) 352, 639, 927, 1213
Fnu4HI GCNGC 1 cut(s) 26
FokI GGATG 5 cut(s) 165, 335, 851, 1221, 1400
FriOI GRGCYC 2 cut(s) 593, 651
Fsp4HI GCNGC 1 cut(s) 26
FspBI CTAG 7 cut(s) 222, 543, 581, 705, 801, 944, 1299
GluI GCNGC 1 cut(s) 26
HaeIII GGCC 3 cut(s) 142, 422, 926
Hin1II CATG 4 cut(s) 356, 643, 931, 1217
HinfI GANTC 2 cut(s) 884, 1275
HphI GGTGA 6 cut(s) 81, 164, 404, 427, 945, 1015
Hpy166II GTNNAC 2 cut(s) 552, 1111
Hpy188I TCNGA 7 cut(s) 78, 309, 413, 633, 856, 990, 1318
Hpy188III TCNNGA 8 cut(s) 169, 475, 620, 640, 824, 836, 1226, 1299
Hpy8I GTNNAC 2 cut(s) 552, 1111
HpyAV CCTTC 8 cut(s) 175, 192, 215, 308, 694, 970, 993, 1215
HpyCH4III ACNGT 1 cut(s) 727
HpyCH4IV ACGT 2 cut(s) 1065, 1416
HpyCH4V TGCA 7 cut(s) 485, 689, 962, 1111, 1217, 1269, 1340
HpyF10VI GCNNNNNNNGC 2 cut(s) 363, 701
HpyF3I CTNAG 3 cut(s) 410, 456, 1383
HpySE526I ACGT 2 cut(s) 1065, 1416
Hsp92II CATG 4 cut(s) 356, 643, 931, 1217
Kzo9I GATC 2 cut(s) 1258, 1313
LguI GCTCTTC 1 cut(s) 279
LmnI GCTCC 1 cut(s) 197
Lsp1109I GCAGC 1 cut(s) 12
LweI GCATC 2 cut(s) 994, 1292
MaeI CTAG 7 cut(s) 222, 543, 581, 705, 801, 944, 1299
MaeII ACGT 2 cut(s) 1065, 1416
MaeIII GTNAC 3 cut(s) 278, 392, 433
MalI GATC 2 cut(s) 1260, 1315
MboI GATC 2 cut(s) 1258, 1313
MfeI CAATTG 1 cut(s) 971
MflI RGATCY 1 cut(s) 1313
MhlI GDGCHC 3 cut(s) 593, 651, 1113
MlsI TGGCCA 1 cut(s) 926
MluNI TGGCCA 1 cut(s) 926
Mox20I TGGCCA 1 cut(s) 926
MroXI GAANNNNTTC 3 cut(s) 236, 296, 627
MscI TGGCCA 1 cut(s) 926
MseI TTAA 2 cut(s) 101, 920
MslI CAYNNNNRTG 1 cut(s) 1218
Msp20I TGGCCA 1 cut(s) 926
MspCI CTTAAG 1 cut(s) 100
MspR9I CCNGG 2 cut(s) 675, 1311
MunI CAATTG 1 cut(s) 971
Mva1269I GAATGC 1 cut(s) 357
MvaI CCWGG 2 cut(s) 675, 1311
MvnI CGCG 1 cut(s) 492
MwoI GCNNNNNNNGC 2 cut(s) 363, 701
NcoI CCATGG 2 cut(s) 352, 927
NdeII GATC 2 cut(s) 1258, 1313
NlaIII CATG 4 cut(s) 356, 643, 931, 1217
NlaIV GGNNCC 1 cut(s) 1203
NmeAIII GCCGAG 1 cut(s) 342
NmuCI GTSAC 3 cut(s) 278, 392, 433
PaeR7I CTCGAG 1 cut(s) 1226
PagI TCATGA 1 cut(s) 639
PciSI GCTCTTC 1 cut(s) 279
PcsI WCGNNNNNNNCGW 1 cut(s) 1071
PctI GAATGC 1 cut(s) 357
PdmI GAANNNNTTC 3 cut(s) 236, 296, 627
PfeI GAWTC 2 cut(s) 884, 1275
Pfl23II CGTACG 1 cut(s) 1413
PfoI TCCNGGA 2 cut(s) 673, 1309
PkrI GCNGC 1 cut(s) 27
Ppu21I YACGTR 1 cut(s) 1417
PshBI ATTAAT 1 cut(s) 920
PsiI TTATAA 1 cut(s) 1149
Psp6I CCWGG 2 cut(s) 673, 1309
PspEI GGTNACC 1 cut(s) 433
PspGI CCWGG 2 cut(s) 673, 1309
PspLI CGTACG 1 cut(s) 1413
PspN4I GGNNCC 1 cut(s) 1203
PspPI GGNCC 2 cut(s) 110, 1201
PstI CTGCAG 1 cut(s) 487
PstNI CAGNNNCTG 1 cut(s) 1316
PsuI RGATCY 1 cut(s) 1313
RsaI GTAC 6 cut(s) 16, 86, 790, 902, 1362, 1415
RsaNI GTAC 6 cut(s) 15, 85, 789, 901, 1361, 1414
RseI CAYNNNNRTG 1 cut(s) 1218
SapI GCTCTTC 1 cut(s) 279
SaqAI TTAA 2 cut(s) 101, 920
SatI GCNGC 1 cut(s) 26
Sau3AI GATC 2 cut(s) 1258, 1313
Sau96I GGNCC 2 cut(s) 110, 1201
ScaI AGTACT 3 cut(s) 16, 86, 790
ScrFI CCNGG 2 cut(s) 675, 1311
SduI GDGCHC 3 cut(s) 593, 651, 1113
SfaNI GCATC 2 cut(s) 994, 1292
SfcI CTRYAG 3 cut(s) 483, 1039, 1401
Sfr274I CTCGAG 1 cut(s) 1226
SinI GGWCC 2 cut(s) 110, 1201
SlaI CTCGAG 1 cut(s) 1226
SmiMI CAYNNNNRTG 1 cut(s) 1218
SmlI CTYRAG 4 cut(s) 100, 824, 1226, 1331
SmoI CTYRAG 4 cut(s) 100, 824, 1226, 1331
SnaBI TACGTA 1 cut(s) 1417
SspI AATATT 1 cut(s) 994
SspMI CTAG 7 cut(s) 222, 543, 581, 705, 801, 944, 1299
StyD4I CCNGG 2 cut(s) 673, 1309
StyI CCWWGG 3 cut(s) 352, 927, 1238
TaaI ACNGT 1 cut(s) 727
TaiI ACGT 2 cut(s) 1068, 1419
TaqI TCGA 2 cut(s) 474, 1227
TaqII GACCGA 1 cut(s) 489
TatI WGTACW 4 cut(s) 14, 84, 788, 1360
TfiI GAWTC 2 cut(s) 884, 1275
Tru1I TTAA 2 cut(s) 101, 920
Tru9I TTAA 2 cut(s) 101, 920
TscAI CASTG 1 cut(s) 487
TseFI GTSAC 3 cut(s) 278, 392, 433
TseI GCWGC 1 cut(s) 25
Tsp45I GTSAC 3 cut(s) 278, 392, 433
TspDTI ATGAA 9 cut(s) 40, 289, 327, 628, 656, 789, 876, 1202, 1223
TspGWI ACGGA 1 cut(s) 1401
TspRI CASTG 1 cut(s) 487
Vha464I CTTAAG 1 cut(s) 100
VneI GTGCAC 1 cut(s) 1109
VpaK11BI GGWCC 2 cut(s) 110, 1201
VspI ATTAAT 1 cut(s) 920
XapI RAATTY 7 cut(s) 615, 1052, 1103, 1136, 1152, 1366, 1421
XbaI TCTAGA 1 cut(s) 1298
XhoI CTCGAG 1 cut(s) 1226
XmnI GAANNNNTTC 3 cut(s) 236, 296, 627
XspI CTAG 7 cut(s) 222, 543, 581, 705, 801, 944, 1299
ZrmI AGTACT 3 cut(s) 16, 86, 790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.