Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001826

Physical Location & Seq

Genomic Coordinates Forward (+)

16078123 .. 16083974

Gene Structure 5852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G147200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGGCTAGCATTTTTTGGCCTGTGGTTTTATTTGGAATGTTTGGCTCCCTTTTGGGTCTCATTTTAAACCACTTCTTGCCCTTAATGTTGCTAAGGCTTAATGGTAGCCCTCCACCCGAAGGGTCTTTTGGGTGGCCTATATTGGGACAAACACTTACCTTCTTGAAGCCTCATCCTTCTAATTCTCTTGGTGCCTTCCTTCAACACCATTGTTCTAGGTATGGGAAAGTGTTTAAATTGCATTTGTTCCTGTCTCCCACAATTGTGTCATGTGATCAAGAGCTCAACTACTTCATACTTCAGAATGAAGGCAAGTTGTTTGAATGCAGCTATCCAAAGCCCATCCATGGAATCCTTGGCAAGAGCTCCATGCTTGTGGCTGTGGCTGATACTCACAAAAGGCTCAGAAATGTGGCTGTCTCCTTGGTCACCATTACCAAGTCCAAGCCTGAGTTTCTCAGTGACATTGAAGCCACAACCATTAGCATACTTCTTCACTCTTGGAAAGATAAATCACAAGTCATCTTTTGTGAGGAAGCCAGAAAGTTCACATTCAATGTAATAGTAAAGCAAGTGCTGGGTTTGACCCCAGATGAGCCACAGACCACAAGAATTCTTGAAGATTTCTTAACTTTCATGAGAGGCCTCATTTCACTCCCTCTTTACATTCCTGGAACCCCATATGCAAGAGCTGTTAAGAGTAAAGAAGAAGACAAGCATGCAGCTGAGACAAGCACTAATTCCAGCAGTAGTAAAAGGAGTGATTTTCTTGAGATACTTATGGATGTTGATACCTTATCTGAAGATGAAAAAGTGAGTTTCATCTTGGATTCTCTATTGGGTGGCTATGAGACTACCTCTCTTGGACTACTGTGGTCCAAGAGATCAGGACTGTATATCAATCCCGATCTCTTGGATCACCGGAATCCAAGAGATTTGTGGTCACTCACCGTTGGATATTATTTAATTCCATCTGGCTGGAAAGTTCTACCCGTCTTTAGTGCAGCTCATTTGGACCCTTCCTTTCTTGCAAGTGCTCTTGAGTTTCATCCTTGGAGATGGGAGAGCCAAGACCAAACGTGCAAAAGATTTACTCCCCTTGGTGGAGGGTGGAGGACTGAGAATGATGACCAACCCATAGCGTTTCCATACGTAGAATTTCAAAGAGGCCTGCCACTGCACTTGGAGCATTGCCCTATCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005488 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009647 GO:0009791 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0020037 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044238 GO:0046906 GO:0048037 GO:0048856 GO:0048878 GO:0050896 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0097159 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00905 ko01100 ko01110 map00905 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

402

Amino Acids

45.28

Weight (kDa)

6.4

Isoelectric Point (pI)

43.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001826)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14400 AT5G14400 AT5G14400 AT5G14400
fragaria_vesca	FvH4_6g40310 FvH4_6g40310 FvH4_6g40310 FvH4_6g40310 FvH4_6g52040
malus_domestica	MD09G1020600.v1.1 MD09G1020700.v1.1 MD17G1120200.v1.1
prunus_persica	Prupe.3G147200_v2.0.a1 Prupe.3G193900_v2.0.a1 Prupe.3G193900_v2.0.a1 Prupe.3G295600_v2.0.a1
pyrus_communis	pycom111g01730
rosa_chinensis	RchiOBHm_Chr2g0155501 RchiOBHm_Chr2g0173551
rosa_laevigata	RLG00000020841 RLG00000022201
rosa_multiflora	Rmu_co8071130.1_g000001 Rmu_sc0001045.1_g000022 Rmu_sc0001046.1_g000003 Rmu_sc0002538.1_g000025 Rmu_sc0003439.1_g000011 Rmu_sc0029872.1_g000004
rosa_roxburghii	Rroxscaffold_2G00078790 Rroxscaffold_2G00093660
rosa_rugosa	Rorug02G0447300 Rorug02G0447400 Rorug02G0571200 Rorug02G0571300
rosa_samantha	Rh2AG513800 Rh2AG650000 Rh2BG524700 Rh2BG660400 Rh2CG498700 Rh2CG625400 Rh2DG533700 Rh2DG675800 Rh5AG197900 Rh5BG196500 Rh5BG196600
rosa_wichuraiana	Rw2G042230 Rw2G053350 Rw5G018070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	191
AclWI	GGATC	1 cut(s)	924
AcsI	RAATTY	2 cut(s)	612, 1157
AcuI	CTGAAG	2 cut(s)	284, 822
AfiI	CCNNNNNNNGG	4 cut(s)	119, 143, 347, 1103
AgsI	TTSAA	7 cut(s)	166, 203, 323, 470, 556, 620, 1163
AjnI	CCWGG	1 cut(s)	670
AjuI	GAANNNNNNNTTGG	2 cut(s)	111, 143
AleI	CACNNNNGTG	1 cut(s)	263
AluBI	AGCT	6 cut(s)	283, 330, 366, 692, 725, 1007
AluI	AGCT	6 cut(s)	283, 330, 366, 692, 725, 1007
Alw21I	GWGCWC	3 cut(s)	285, 368, 1039
Alw26I	GTCTC	5 cut(s)	62, 258, 424, 722, 845
AlwI	GGATC	1 cut(s)	924
AoxI	GGCC	4 cut(s)	17, 134, 643, 1168
ApeKI	GCWGC	3 cut(s)	327, 722, 1004
ApoI	RAATTY	2 cut(s)	612, 1157
AspS9I	GGNCC	2 cut(s)	876, 1015
AsuHPI	GGTGA	3 cut(s)	421, 911, 940
AsuNHI	GCTAGC	1 cut(s)	5
AvaII	GGWCC	2 cut(s)	876, 1015
BanI	GGYRCC	1 cut(s)	191
BanII	GRGCYC	2 cut(s)	285, 368
BbsI	GAAGAC	1 cut(s)	717
Bbv12I	GWGCWC	3 cut(s)	285, 368, 1039
BbvI	GCAGC	3 cut(s)	339, 734, 1016
BccI	CCATC	3 cut(s)	350, 979, 1053
BciT130I	CCWGG	1 cut(s)	672
BclI	TGATCA	1 cut(s)	274
BcoDI	GTCTC	5 cut(s)	62, 258, 424, 722, 845
BfaI	CTAG	2 cut(s)	6, 216
BisI	GCNGC	3 cut(s)	328, 723, 1005
BlsI	GCNGC	3 cut(s)	329, 724, 1006
Bme1390I	CCNGG	1 cut(s)	672
Bme18I	GGWCC	2 cut(s)	876, 1015
BmgT120I	GGNCC	2 cut(s)	876, 1015
BmiI	GGNNCC	4 cut(s)	46, 193, 676, 1017
BmrFI	CCNGG	1 cut(s)	672
BmtI	GCTAGC	1 cut(s)	9
BpiI	GAAGAC	1 cut(s)	717
BplI	GAGNNNNNCTC	2 cut(s)	842, 874
Bpu10I	CCTNAGC	1 cut(s)	92
BpuEI	CTTGAG	2 cut(s)	791, 1061
BsaAI	YACGTR	1 cut(s)	1153
BsaI	GGTCTC	1 cut(s)	62
BsaJI	CCNNGG	5 cut(s)	346, 355, 423, 1052, 1099
BsaWI	WCCGGW	1 cut(s)	921
Bsc4I	CCNNNNNNNGG	4 cut(s)	119, 143, 347, 1103
Bse3DI	GCAATG	1 cut(s)	1189
BseBI	CCWGG	1 cut(s)	672
BseDI	CCNNGG	5 cut(s)	346, 355, 423, 1052, 1099
BseGI	GGATG	4 cut(s)	172, 342, 790, 1048
BseLI	CCNNNNNNNGG	4 cut(s)	119, 143, 347, 1103
BseMI	GCAATG	1 cut(s)	1189
BseMII	CTCAG	5 cut(s)	418, 441, 472, 717, 1110
BseXI	GCAGC	3 cut(s)	339, 734, 1016
BseYI	CCCAGC	1 cut(s)	577
BsgI	GTGCAG	2 cut(s)	1023, 1163
BshFI	GGCC	4 cut(s)	19, 136, 645, 1170
BshNI	GGYRCC	1 cut(s)	191
BsiHKAI	GWGCWC	3 cut(s)	285, 368, 1039
BsiSI	CCGG	1 cut(s)	922
BslFI	GGGAC	1 cut(s)	159
BslI	CCNNNNNNNGG	4 cut(s)	119, 143, 347, 1103
BsmAI	GTCTC	5 cut(s)	62, 258, 424, 722, 845
BsmFI	GGGAC	1 cut(s)	159
BsmI	GAATGC	1 cut(s)	329
BsnI	GGCC	4 cut(s)	19, 136, 645, 1170
Bso31I	GGTCTC	1 cut(s)	62
Bsp1286I	GDGCHC	3 cut(s)	285, 368, 1039
Bsp143I	GATC	4 cut(s)	274, 884, 907, 916
Bsp19I	CCATGG	1 cut(s)	346
BspANI	GGCC	4 cut(s)	19, 136, 645, 1170
BspCNI	CTCAG	5 cut(s)	417, 442, 471, 718, 1111
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	4 cut(s)	46, 193, 676, 1017
BspOI	GCTAGC	1 cut(s)	9
BspPI	GGATC	1 cut(s)	924
BspT107I	GGYRCC	1 cut(s)	191
BspTNI	GGTCTC	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	1189
BssECI	CCNNGG	5 cut(s)	346, 355, 423, 1052, 1099
BssMI	GATC	4 cut(s)	274, 884, 907, 916
BssT1I	CCWWGG	5 cut(s)	346, 355, 423, 1052, 1099
Bst2UI	CCWGG	1 cut(s)	672
Bst4CI	ACNGT	3 cut(s)	873, 894, 952
BstBAI	YACGTR	1 cut(s)	1153
BstC8I	GCNNGC	3 cut(s)	7, 720, 1172
BstDEI	CTNAG	6 cut(s)	92, 404, 450, 458, 726, 1119
BstDSI	CCRYGG	1 cut(s)	346
BstEII	GGTNACC	1 cut(s)	427
BstF5I	GGATG	4 cut(s)	172, 342, 790, 1048
BstKTI	GATC	4 cut(s)	277, 887, 910, 919
BstMAI	GTCTC	5 cut(s)	62, 258, 424, 722, 845
BstMBI	GATC	4 cut(s)	274, 884, 907, 916
BstMWI	GCNNNNNNNGC	1 cut(s)	1186
BstNI	CCWGG	1 cut(s)	672
BstNSI	RCATGY	1 cut(s)	722
BstPI	GGTNACC	1 cut(s)	427
BstSCI	CCNGG	1 cut(s)	670
BstSNI	TACGTA	1 cut(s)	1153
BstV1I	GCAGC	3 cut(s)	339, 734, 1016
BstV2I	GAAGAC	1 cut(s)	717
BstXI	CCANNNNNNTGG	2 cut(s)	376, 978
BsuRI	GGCC	4 cut(s)	19, 136, 645, 1170
BtgI	CCRYGG	1 cut(s)	346
BtsCI	GGATG	4 cut(s)	172, 342, 790, 1048
BtsI	GCAGTG	1 cut(s)	1175
BtsIMutI	CAGTG	2 cut(s)	466, 1175
Cac8I	GCNNGC	3 cut(s)	7, 720, 1172
CciI	TCATGA	1 cut(s)	636
Cfr13I	GGNCC	2 cut(s)	876, 1015
CspCI	CAANNNNNGTGG	2 cut(s)	1164, 1199
CviAII	CATG	5 cut(s)	270, 347, 370, 637, 719
DdeI	CTNAG	6 cut(s)	92, 404, 450, 458, 726, 1119
DpnI	GATC	4 cut(s)	276, 886, 909, 918
DpnII	GATC	4 cut(s)	274, 884, 907, 916
DraI	TTTAAA	2 cut(s)	66, 235
Ecl136II	GAGCTC	2 cut(s)	283, 366
Eco105I	TACGTA	1 cut(s)	1153
Eco130I	CCWWGG	5 cut(s)	346, 355, 423, 1052, 1099
Eco147I	AGGCCT	2 cut(s)	645, 1170
Eco24I	GRGCYC	2 cut(s)	285, 368
Eco31I	GGTCTC	1 cut(s)	62
Eco47I	GGWCC	2 cut(s)	876, 1015
Eco53kI	GAGCTC	2 cut(s)	283, 366
Eco57I	CTGAAG	2 cut(s)	284, 822
Eco91I	GGTNACC	1 cut(s)	427
EcoICRI	GAGCTC	2 cut(s)	283, 366
EcoO65I	GGTNACC	1 cut(s)	427
EcoRI	GAATTC	1 cut(s)	612
EcoRII	CCWGG	1 cut(s)	670
EcoT14I	CCWWGG	5 cut(s)	346, 355, 423, 1052, 1099
EcoT38I	GRGCYC	2 cut(s)	285, 368
ErhI	CCWWGG	5 cut(s)	346, 355, 423, 1052, 1099
FaeI	CATG	5 cut(s)	273, 350, 373, 640, 722
FaqI	GGGAC	1 cut(s)	159
FatI	CATG	5 cut(s)	269, 346, 369, 636, 718
FauNDI	CATATG	1 cut(s)	682
FbaI	TGATCA	1 cut(s)	274
Fnu4HI	GCNGC	3 cut(s)	328, 723, 1005
FokI	GGATG	4 cut(s)	159, 329, 797, 1035
FriOI	GRGCYC	2 cut(s)	285, 368
Fsp4HI	GCNGC	3 cut(s)	328, 723, 1005
FspBI	CTAG	2 cut(s)	6, 216
GluI	GCNGC	3 cut(s)	328, 723, 1005
GsaI	CCCAGC	1 cut(s)	581
HaeIII	GGCC	4 cut(s)	19, 136, 645, 1170
HapII	CCGG	1 cut(s)	922
Hin1II	CATG	5 cut(s)	273, 350, 373, 640, 722
HinfI	GANTC	3 cut(s)	351, 830, 925
HpaII	CCGG	1 cut(s)	922
HphI	GGTGA	3 cut(s)	421, 911, 940
Hpy166II	GTNNAC	1 cut(s)	549
Hpy188I	TCNGA	3 cut(s)	303, 407, 802
Hpy188III	TCNNGA	8 cut(s)	163, 278, 617, 637, 770, 888, 905, 1040
Hpy8I	GTNNAC	1 cut(s)	549
HpyAV	CCTTC	7 cut(s)	113, 169, 186, 205, 209, 302, 1029
HpyCH4III	ACNGT	3 cut(s)	873, 894, 952
HpyCH4IV	ACGT	2 cut(s)	1079, 1152
HpyCH4V	TGCA	8 cut(s)	241, 327, 686, 722, 1004, 1031, 1083, 1180
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1186
HpyF3I	CTNAG	6 cut(s)	92, 404, 450, 458, 726, 1119
HpySE526I	ACGT	2 cut(s)	1079, 1152
Hsp92II	CATG	5 cut(s)	273, 350, 373, 640, 722
Ksp22I	TGATCA	1 cut(s)	274
Kzo9I	GATC	4 cut(s)	274, 884, 907, 916
LmnI	GCTCC	3 cut(s)	50, 371, 1186
Lsp1109I	GCAGC	3 cut(s)	339, 734, 1016
MaeI	CTAG	2 cut(s)	6, 216
MaeII	ACGT	2 cut(s)	1079, 1152
MaeIII	GTNAC	3 cut(s)	427, 461, 942
MalI	GATC	4 cut(s)	276, 886, 909, 918
MboI	GATC	4 cut(s)	274, 884, 907, 916
MboII	GAAGA	5 cut(s)	485, 632, 719, 722, 815
MfeI	CAATTG	1 cut(s)	261
MhlI	GDGCHC	3 cut(s)	285, 368, 1039
MluCI	AATT	8 cut(s)	181, 236, 261, 612, 739, 966, 1157, 1201
MmeI	TCCRAC	1 cut(s)	934
MseI	TTAA	8 cut(s)	65, 83, 99, 234, 629, 696, 965, 1204
MslI	CAYNNNNRTG	2 cut(s)	263, 374
MspA1I	CMGCKG	1 cut(s)	725
MspI	CCGG	1 cut(s)	922
MspR9I	CCNGG	1 cut(s)	672
MunI	CAATTG	1 cut(s)	261
Mva1269I	GAATGC	1 cut(s)	329
MvaI	CCWGG	1 cut(s)	672
MwoI	GCNNNNNNNGC	1 cut(s)	1186
NcoI	CCATGG	1 cut(s)	346
NdeI	CATATG	1 cut(s)	682
NdeII	GATC	4 cut(s)	274, 884, 907, 916
NheI	GCTAGC	1 cut(s)	5
NlaIII	CATG	5 cut(s)	273, 350, 373, 640, 722
NlaIV	GGNNCC	4 cut(s)	46, 193, 676, 1017
NmuCI	GTSAC	3 cut(s)	427, 461, 942
NspI	RCATGY	1 cut(s)	722
OliI	CACNNNNGTG	1 cut(s)	263
PaeI	GCATGC	1 cut(s)	722
PagI	TCATGA	1 cut(s)	636
PceI	AGGCCT	2 cut(s)	645, 1170
PctI	GAATGC	1 cut(s)	329
PfeI	GAWTC	3 cut(s)	351, 830, 925
PfoI	TCCNGGA	1 cut(s)	670
PkrI	GCNGC	3 cut(s)	329, 724, 1006
Ppu21I	YACGTR	1 cut(s)	1153
Psp124BI	GAGCTC	2 cut(s)	285, 368
Psp6I	CCWGG	1 cut(s)	670
PspEI	GGTNACC	1 cut(s)	427
PspFI	CCCAGC	1 cut(s)	577
PspGI	CCWGG	1 cut(s)	670
PspN4I	GGNNCC	4 cut(s)	46, 193, 676, 1017
PspPI	GGNCC	2 cut(s)	876, 1015
PvuII	CAGCTG	1 cut(s)	725
RseI	CAYNNNNRTG	2 cut(s)	263, 374
SacI	GAGCTC	2 cut(s)	285, 368
SaqAI	TTAA	8 cut(s)	65, 83, 99, 234, 629, 696, 965, 1204
SatI	GCNGC	3 cut(s)	328, 723, 1005
Sau3AI	GATC	4 cut(s)	274, 884, 907, 916
Sau96I	GGNCC	2 cut(s)	876, 1015
ScrFI	CCNGG	1 cut(s)	672
SduI	GDGCHC	3 cut(s)	285, 368, 1039
SinI	GGWCC	2 cut(s)	876, 1015
SmiMI	CAYNNNNRTG	2 cut(s)	263, 374
SmlI	CTYRAG	2 cut(s)	770, 1040
SmoI	CTYRAG	2 cut(s)	770, 1040
SnaBI	TACGTA	1 cut(s)	1153
SphI	GCATGC	1 cut(s)	722
Sse9I	AATT	8 cut(s)	181, 236, 261, 612, 739, 966, 1157, 1201
SseBI	AGGCCT	2 cut(s)	645, 1170
SspMI	CTAG	2 cut(s)	6, 216
SstI	GAGCTC	2 cut(s)	285, 368
StuI	AGGCCT	2 cut(s)	645, 1170
StyD4I	CCNGG	1 cut(s)	670
StyI	CCWWGG	5 cut(s)	346, 355, 423, 1052, 1099
TaaI	ACNGT	3 cut(s)	873, 894, 952
TaiI	ACGT	2 cut(s)	1082, 1155
TasI	AATT	8 cut(s)	181, 236, 261, 612, 739, 966, 1157, 1201
TfiI	GAWTC	3 cut(s)	351, 830, 925
Tru1I	TTAA	8 cut(s)	65, 83, 99, 234, 629, 696, 965, 1204
Tru9I	TTAA	8 cut(s)	65, 83, 99, 234, 629, 696, 965, 1204
TscAI	CASTG	2 cut(s)	466, 1182
TseFI	GTSAC	3 cut(s)	427, 461, 942
TseI	GCWGC	3 cut(s)	327, 722, 1004
Tsp45I	GTSAC	3 cut(s)	427, 461, 942
TspDTI	ATGAA	6 cut(s)	283, 321, 625, 811, 822, 1037
TspRI	CASTG	2 cut(s)	466, 1182
VpaK11BI	GGWCC	2 cut(s)	876, 1015
XapI	RAATTY	2 cut(s)	612, 1157
XceI	RCATGY	1 cut(s)	722
XcmI	CCANNNNNNNNNTGG	2 cut(s)	353, 936
XspI	CTAG	2 cut(s)	6, 216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.