MD17G1120200.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
10473591 .. 10477981
4391 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1120200.v1.1.491

Sequence Viewer

Length: 1452 bp
ATGGCAGGAAGCACTTTTTGGCTTGTTCTTCTAATTGGGGTTTTTGGCTTTCTTTTGGTTCTAATTCTAAACCACTTCTTGCCCTTAATGTTGTTAAGGCTTAATGGTACTCTTCCGCCTAAGGGCTCTTTTGGGTGGCCTCTGTTGGGAGAAACTCTTAGCTTCTTGAAGCCTCATCCTTCTAATTCTCTTGGTGCCTTCCTTAAACACCATTGTTCTAGGTATGGGAAAGTGTTCAAATCCCATTTGTTCTTGTCTCCCACAATTGTGTCATGTGATCAAGAGCTGAACTACTTCATACTTCAGAATGAAGGTAAGTTGTTTGAATGCAGCTATCCAAAGCCTATCCATGGCATCCTTGGAAAATCCTCCATGCTTGTGGCTGTAGGTGACACTCACAAAAGGCTCAGAAATGTGGCTGTCTCCTTGGTCACCATCACCAAGACCAAGCCTGAGTTTCTTAGTGACATTGAAGCCACAGCCATTGGCATACTTCACTCTTGGAAAGATAAATCAAGAGTCATCTTCTGTGAGGAAGCCAGAAAGTTCACATTCAATGTAATAGTGAAGCAAGTGCTAGGTTTAACCCCAGTTGAGCCACAGGCTACACAAATTCTTGAAGATTTCCTGACTTTCATGAGAGGGCTCATTTCTCTTCCTCTCTATATTCCTGGAACCCCATATGCAAGAGCTGTTAAGGCTAGAAGCAGGATATCTTCAACTGTGAAAGCAATCATAGAGGAAAGAAGAAGAAATGCAGATGGGAGCACGAATTCTTGTACTAAAAGAAGTGATTTCCTTGAGATACTTCTGGATGTTGATTCCTTGTCTGAAGATGAGAAAGTGAGTTTTATCTTGGATTCTCTATTGGGTGGCTATGAAACCACCTCTCTCTTGATGGCCATGGTAGTTTATTTTCTAGCCCAATCACCATCTGCATTACAACGATTAAAGGTAGAGCATCAGAACATTAGAAGAGTGAAGCAGAAAGATGAGTATCTGAACTGGGACGACTATAAAAAAATGGAATTCACCCAAAATGTCATTAACGAAGCTCTCAGATGTGGAAACGTTGTAAAATTCGTGCACCGAAAGGCTCTCAAAGATGTAAAATTTAGAGATTATTTAATTCCATCTGGCTGGAAAGTTTTACCAGTTTTTAGTGCAGCTCATTTAGACCCTTCTCTTCATGCAAGTGCTCTTGAGTTTGATCCTTGGAGATGGGAGAAAATACCAAGCCAAGACCATGTATGCAAGAAATTTACTCCCTTCGGTGGAGGGTCTAGATGCTGTCCTGGATCTGAACTTGGGAAGCTTGAAGTTGCTGTTTTTCTCCACCACCTTGTACAGAATTTCAGGTGGAGGACCGAGGACGACGACGAACCCGTAGCGTTTCCATACGTAGAATTTCAAAGAGGATTGCCACTGTACCTGGAGCATTGCCCCCATTAA

Protein Analysis

484

Amino Acids

54.87

Weight (kDa)

8.84

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 462 8.6e-60 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 194
AciI CCGC 1 cut(s) 116
AclI AACGTT 1 cut(s) 1071
AclWI GGATC 2 cut(s) 1205, 1306
AcoI YGGCCR 1 cut(s) 900
AcsI RAATTY 8 cut(s) 612, 772, 1028, 1079, 1112, 1259, 1351, 1406
AcuI CTGAAG 2 cut(s) 287, 852
AfaI GTAC 4 cut(s) 109, 781, 1347, 1430
AfiI CCNNNNNNNGG 4 cut(s) 122, 146, 350, 1274
AgsI TTSAA 9 cut(s) 169, 238, 326, 473, 556, 620, 720, 1319, 1412
AjnI CCWGG 3 cut(s) 670, 1294, 1431
AjuI GAANNNNNNNTTGG 1 cut(s) 33
AleI CACNNNNGTG 1 cut(s) 266
AluBI AGCT 7 cut(s) 162, 286, 333, 692, 1055, 1169, 1315
AluI AGCT 7 cut(s) 162, 286, 333, 692, 1055, 1169, 1315
Alw21I GWGCWC 3 cut(s) 770, 1089, 1201
Alw26I GTCTC 2 cut(s) 261, 427
Alw44I GTGCAC 1 cut(s) 1085
AlwI GGATC 2 cut(s) 1205, 1306
AoxI GGCC 2 cut(s) 137, 900
ApaLI GTGCAC 1 cut(s) 1085
ApeKI GCWGC 2 cut(s) 330, 1166
ApoI RAATTY 8 cut(s) 612, 772, 1028, 1079, 1112, 1259, 1351, 1406
Asp700I GAANNNNTTC 2 cut(s) 233, 293
AspS9I GGNCC 1 cut(s) 1365
AsuHPI GGTGA 5 cut(s) 401, 424, 430, 921, 1024
AvaII GGWCC 1 cut(s) 1365
AxyI CCTNAGG 1 cut(s) 120
BaeGI GKGCMC 1 cut(s) 1089
BalI TGGCCA 1 cut(s) 902
BanI GGYRCC 1 cut(s) 194
BanII GRGCYC 2 cut(s) 128, 648
Bbv12I GWGCWC 3 cut(s) 770, 1089, 1201
BbvI GCAGC 2 cut(s) 342, 1178
BccI CCATC 6 cut(s) 443, 755, 892, 940, 1141, 1215
BciT130I CCWGG 3 cut(s) 672, 1296, 1433
BclI TGATCA 1 cut(s) 277
BcoDI GTCTC 2 cut(s) 261, 427
BfaI CTAG 5 cut(s) 219, 578, 702, 920, 1284
BfmI CTRYAG 1 cut(s) 384
BisI GCNGC 2 cut(s) 331, 1167
BlsI GCNGC 2 cut(s) 332, 1168
Bme1390I CCNGG 3 cut(s) 672, 1296, 1433
Bme18I GGWCC 1 cut(s) 1365
BmgT120I GGNCC 1 cut(s) 1365
BmiI GGNNCC 2 cut(s) 196, 676
BmrFI CCNGG 3 cut(s) 672, 1296, 1433
BmrI ACTGGG 2 cut(s) 584, 1015
BmsI GCATC 3 cut(s) 363, 970, 1277
BmuI ACTGGG 2 cut(s) 584, 1015
BpuEI CTTGAG 2 cut(s) 821, 1223
BsaAI YACGTR 1 cut(s) 1402
BsaBI GATNNNNATC 1 cut(s) 996
BsaJI CCNNGG 6 cut(s) 349, 358, 426, 903, 1214, 1368
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 146, 350, 1274
Bse1I ACTGG 3 cut(s) 590, 1010, 1154
Bse21I CCTNAGG 1 cut(s) 120
Bse3DI GCAATG 1 cut(s) 1438
Bse8I GATNNNNATC 1 cut(s) 996
BseBI CCWGG 3 cut(s) 672, 1296, 1433
BseDI CCNNGG 6 cut(s) 349, 358, 426, 903, 1214, 1368
BseGI GGATG 3 cut(s) 175, 354, 820
BseJI GATNNNNATC 1 cut(s) 996
BseLI CCNNNNNNNGG 4 cut(s) 122, 146, 350, 1274
BseMI GCAATG 1 cut(s) 1438
BseMII CTCAG 3 cut(s) 421, 444, 1072
BseNI ACTGG 3 cut(s) 590, 1010, 1154
BseSI GKGCMC 1 cut(s) 1089
BseXI GCAGC 2 cut(s) 342, 1178
BsgI GTGCAG 1 cut(s) 1185
BshFI GGCC 2 cut(s) 139, 902
BshNI GGYRCC 1 cut(s) 194
BsiHKAI GWGCWC 3 cut(s) 770, 1089, 1201
BslFI GGGAC 1 cut(s) 1022
BslI CCNNNNNNNGG 4 cut(s) 122, 146, 350, 1274
BsmAI GTCTC 2 cut(s) 261, 427
BsmFI GGGAC 1 cut(s) 1022
BsmI GAATGC 1 cut(s) 332
BsnI GGCC 2 cut(s) 139, 902
Bsp1286I GDGCHC 5 cut(s) 128, 648, 770, 1089, 1201
Bsp1407I TGTACA 1 cut(s) 1345
Bsp143I GATC 3 cut(s) 277, 1210, 1298
Bsp19I CCATGG 2 cut(s) 349, 903
BspACI CCGC 1 cut(s) 116
BspANI GGCC 2 cut(s) 139, 902
BspCNI CTCAG 3 cut(s) 420, 445, 1071
BspHI TCATGA 1 cut(s) 636
BspLI GGNNCC 2 cut(s) 196, 676
BspPI GGATC 2 cut(s) 1205, 1306
BspT107I GGYRCC 1 cut(s) 194
BsrDI GCAATG 1 cut(s) 1438
BsrGI TGTACA 1 cut(s) 1345
BsrI ACTGG 3 cut(s) 590, 1010, 1154
BssECI CCNNGG 6 cut(s) 349, 358, 426, 903, 1214, 1368
BssMI GATC 3 cut(s) 277, 1210, 1298
BssT1I CCWWGG 5 cut(s) 349, 358, 426, 903, 1214
Bst2UI CCWGG 3 cut(s) 672, 1296, 1433
Bst4CI ACNGT 2 cut(s) 724, 1428
Bst6I CTCTTC 4 cut(s) 117, 660, 970, 1191
BstAUI TGTACA 1 cut(s) 1345
BstBAI YACGTR 1 cut(s) 1402
BstDEI CTNAG 6 cut(s) 120, 158, 407, 453, 461, 1058
BstDSI CCRYGG 2 cut(s) 349, 903
BstEII GGTNACC 1 cut(s) 430
BstF5I GGATG 3 cut(s) 175, 354, 820
BstKTI GATC 3 cut(s) 280, 1213, 1301
BstMAI GTCTC 2 cut(s) 261, 427
BstMBI GATC 3 cut(s) 277, 1210, 1298
BstMWI GCNNNNNNNGC 1 cut(s) 698
BstNI CCWGG 3 cut(s) 672, 1296, 1433
BstPI GGTNACC 1 cut(s) 430
BstSCI CCNGG 3 cut(s) 670, 1294, 1431
BstSFI CTRYAG 1 cut(s) 384
BstSLI GKGCMC 1 cut(s) 1089
BstSNI TACGTA 1 cut(s) 1402
BstV1I GCAGC 2 cut(s) 342, 1178
BstX2I RGATCY 1 cut(s) 1298
BstXI CCANNNNNNTGG 2 cut(s) 379, 1140
BstYI RGATCY 1 cut(s) 1298
Bsu36I CCTNAGG 1 cut(s) 120
BsuRI GGCC 2 cut(s) 139, 902
BtgI CCRYGG 2 cut(s) 349, 903
BtsCI GGATG 3 cut(s) 175, 354, 820
BtsIMutI CAGTG 1 cut(s) 1424
CciI TCATGA 1 cut(s) 636
Cfr13I GGNCC 1 cut(s) 1365
Csp6I GTAC 4 cut(s) 108, 780, 1346, 1429
CspCI CAANNNNNGTGG 2 cut(s) 466, 501
CviAII CATG 7 cut(s) 273, 350, 373, 637, 904, 1190, 1247
CviQI GTAC 4 cut(s) 108, 780, 1346, 1429
DdeI CTNAG 6 cut(s) 120, 158, 407, 453, 461, 1058
DpnI GATC 3 cut(s) 279, 1212, 1300
DpnII GATC 3 cut(s) 277, 1210, 1298
EaeI YGGCCR 1 cut(s) 900
Eam1104I CTCTTC 4 cut(s) 117, 660, 970, 1191
EarI CTCTTC 4 cut(s) 117, 660, 970, 1191
EciI GGCGGA 1 cut(s) 105
Eco105I TACGTA 1 cut(s) 1402
Eco130I CCWWGG 5 cut(s) 349, 358, 426, 903, 1214
Eco24I GRGCYC 2 cut(s) 128, 648
Eco32I GATATC 1 cut(s) 714
Eco47I GGWCC 1 cut(s) 1365
Eco57I CTGAAG 2 cut(s) 287, 852
Eco81I CCTNAGG 1 cut(s) 120
Eco91I GGTNACC 1 cut(s) 430
EcoO65I GGTNACC 1 cut(s) 430
EcoRI GAATTC 2 cut(s) 772, 1028
EcoRII CCWGG 3 cut(s) 670, 1294, 1431
EcoRV GATATC 1 cut(s) 714
EcoT14I CCWWGG 5 cut(s) 349, 358, 426, 903, 1214
EcoT38I GRGCYC 2 cut(s) 128, 648
ErhI CCWWGG 5 cut(s) 349, 358, 426, 903, 1214
FaeI CATG 7 cut(s) 276, 353, 376, 640, 907, 1193, 1250
FaqI GGGAC 1 cut(s) 1022
FatI CATG 7 cut(s) 272, 349, 372, 636, 903, 1189, 1246
FauNDI CATATG 1 cut(s) 682
FbaI TGATCA 1 cut(s) 277
Fnu4HI GCNGC 2 cut(s) 331, 1167
FokI GGATG 3 cut(s) 162, 341, 827
FriOI GRGCYC 2 cut(s) 128, 648
Fsp4HI GCNGC 2 cut(s) 331, 1167
FspBI CTAG 5 cut(s) 219, 578, 702, 920, 1284
GluI GCNGC 2 cut(s) 331, 1167
HaeIII GGCC 2 cut(s) 139, 902
Hin1II CATG 7 cut(s) 276, 353, 376, 640, 907, 1193, 1250
HindIII AAGCTT 1 cut(s) 1313
HinfI GANTC 3 cut(s) 519, 821, 860
HphI GGTGA 5 cut(s) 401, 424, 430, 921, 1024
Hpy166II GTNNAC 2 cut(s) 549, 1087
Hpy188I TCNGA 7 cut(s) 306, 410, 832, 966, 1002, 1061, 1303
Hpy8I GTNNAC 2 cut(s) 549, 1087
Hpy99I CGWCG 2 cut(s) 1379, 1382
HpyAV CCTTC 5 cut(s) 189, 208, 305, 1191, 1279
HpyCH4III ACNGT 2 cut(s) 724, 1428
HpyCH4IV ACGT 2 cut(s) 1071, 1401
HpyCH4V TGCA 8 cut(s) 330, 686, 758, 938, 1087, 1166, 1193, 1254
HpyF10VI GCNNNNNNNGC 1 cut(s) 698
HpyF3I CTNAG 6 cut(s) 120, 158, 407, 453, 461, 1058
HpySE526I ACGT 2 cut(s) 1071, 1401
Hsp92II CATG 7 cut(s) 276, 353, 376, 640, 907, 1193, 1250
Ksp22I TGATCA 1 cut(s) 277
Kzo9I GATC 3 cut(s) 277, 1210, 1298
LmnI GCTCC 2 cut(s) 765, 1435
Lsp1109I GCAGC 2 cut(s) 342, 1178
LweI GCATC 3 cut(s) 363, 970, 1277
MaeI CTAG 5 cut(s) 219, 578, 702, 920, 1284
MaeII ACGT 2 cut(s) 1071, 1401
MaeIII GTNAC 3 cut(s) 389, 430, 464
MalI GATC 3 cut(s) 279, 1212, 1300
MboI GATC 3 cut(s) 277, 1210, 1298
MfeI CAATTG 1 cut(s) 264
MflI RGATCY 1 cut(s) 1298
MhlI GDGCHC 5 cut(s) 128, 648, 770, 1089, 1201
MlsI TGGCCA 1 cut(s) 902
MluNI TGGCCA 1 cut(s) 902
MlyI GAGTC 1 cut(s) 528
Mox20I TGGCCA 1 cut(s) 902
MroXI GAANNNNTTC 2 cut(s) 233, 293
MscI TGGCCA 1 cut(s) 902
MslI CAYNNNNRTG 3 cut(s) 266, 377, 1194
Msp20I TGGCCA 1 cut(s) 902
MspR9I CCNGG 3 cut(s) 672, 1296, 1433
MunI CAATTG 1 cut(s) 264
Mva1269I GAATGC 1 cut(s) 332
MvaI CCWGG 3 cut(s) 672, 1296, 1433
MwoI GCNNNNNNNGC 1 cut(s) 698
NcoI CCATGG 2 cut(s) 349, 903
NdeI CATATG 1 cut(s) 682
NdeII GATC 3 cut(s) 277, 1210, 1298
NlaIII CATG 7 cut(s) 276, 353, 376, 640, 907, 1193, 1250
NlaIV GGNNCC 2 cut(s) 196, 676
NmuCI GTSAC 3 cut(s) 389, 430, 464
OliI CACNNNNGTG 1 cut(s) 266
PagI TCATGA 1 cut(s) 636
PcsI WCGNNNNNNNCGW 1 cut(s) 1383
PctI GAATGC 1 cut(s) 332
PdmI GAANNNNTTC 2 cut(s) 233, 293
PfeI GAWTC 2 cut(s) 821, 860
PfoI TCCNGGA 2 cut(s) 670, 1294
PkrI GCNGC 2 cut(s) 332, 1168
PleI GAGTC 1 cut(s) 527
PpsI GAGTC 1 cut(s) 527
Ppu21I YACGTR 1 cut(s) 1402
Psp1406I AACGTT 1 cut(s) 1071
Psp6I CCWGG 3 cut(s) 670, 1294, 1431
PspEI GGTNACC 1 cut(s) 430
PspGI CCWGG 3 cut(s) 670, 1294, 1431
PspN4I GGNNCC 2 cut(s) 196, 676
PspPI GGNCC 1 cut(s) 1365
PsuI RGATCY 1 cut(s) 1298
RsaI GTAC 4 cut(s) 109, 781, 1347, 1430
RsaNI GTAC 4 cut(s) 108, 780, 1346, 1429
RseI CAYNNNNRTG 3 cut(s) 266, 377, 1194
SatI GCNGC 2 cut(s) 331, 1167
Sau3AI GATC 3 cut(s) 277, 1210, 1298
Sau96I GGNCC 1 cut(s) 1365
SchI GAGTC 1 cut(s) 528
ScrFI CCNGG 3 cut(s) 672, 1296, 1433
SduI GDGCHC 5 cut(s) 128, 648, 770, 1089, 1201
SfaNI GCATC 3 cut(s) 363, 970, 1277
SfcI CTRYAG 1 cut(s) 384
SinI GGWCC 1 cut(s) 1365
SmiMI CAYNNNNRTG 3 cut(s) 266, 377, 1194
SmlI CTYRAG 2 cut(s) 800, 1202
SmoI CTYRAG 2 cut(s) 800, 1202
SnaBI TACGTA 1 cut(s) 1402
SsiI CCGC 1 cut(s) 116
SspMI CTAG 5 cut(s) 219, 578, 702, 920, 1284
StyD4I CCNGG 3 cut(s) 670, 1294, 1431
StyI CCWWGG 5 cut(s) 349, 358, 426, 903, 1214
TaaI ACNGT 2 cut(s) 724, 1428
TaiI ACGT 2 cut(s) 1074, 1404
TaqII GACCGA 1 cut(s) 1382
TatI WGTACW 2 cut(s) 779, 1345
TfiI GAWTC 2 cut(s) 821, 860
TscAI CASTG 1 cut(s) 1431
TseFI GTSAC 3 cut(s) 389, 430, 464
TseI GCWGC 2 cut(s) 330, 1166
Tsp45I GTSAC 3 cut(s) 389, 430, 464
TspDTI ATGAA 5 cut(s) 286, 324, 625, 894, 1178
TspRI CASTG 1 cut(s) 1431
VneI GTGCAC 1 cut(s) 1085
VpaK11BI GGWCC 1 cut(s) 1365
XapI RAATTY 8 cut(s) 612, 772, 1028, 1079, 1112, 1259, 1351, 1406
XbaI TCTAGA 1 cut(s) 1283
XcmI CCANNNNNNNNNTGG 1 cut(s) 356
XmnI GAANNNNTTC 2 cut(s) 233, 293
XspI CTAG 5 cut(s) 219, 578, 702, 920, 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.