Prupe.3G193900_v2.0.a1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
20530142 .. 20534933
4792 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G193900.2

Sequence Viewer

Length: 1464 bp
ATGGCCGGAAGCACTTTTTGGCCTGTGGTTCTATTTGGAATGTTTTTTGGCTCCCTTTTGGGTCTCATTTTAAACCACTTCTTACCCTTAATGTTGCTAAGGCTTAATGGTAGCCCTCCACCCAAAGGGTCTTTTGGGTGGCCTATATTGGGACAAACACTTGCCTTCTTGAAGCCTCATCCATCTAATTCTCTTGGTGCCTTCCTTCAACACCATTGTTCTAGGTATGGGAAAGTGTTTAAATCGCATTTGTTCCTGTCTCCCACAATTGTGTCATGTGATCAAGAGCTCAACTACTTCATACTTCAGAATGAAGGCAAGTTGTTTGAATGCAGCTATCCAAAGCCCATCCATGGAATCCTTGGCAAGAGCTCCATGCTTGTGGCTGTGGCTGATACTCACAAAAGGCTCAGAAATGTGGCTGTCTCCTTGGTCACCATTACCAAGTCCAAGCCTGAGTTTCTCAGTGACATTGAAGCCACAACCATTAGCATACTTCACTCTTGGAAAGATAAATCACAAGTCATCTTTTGTGAGGAAGCCAGAAAGTTCACATTCAATGTAATAGTAAAGCAAGTGCTAGGTTTGACCCCAGATGAGCCACAGACCACAAGAATTCTTGAAGATTTCTTGACTTTCATGAGAGGCCTCATTTCACTCCCTCTTTACATTCCTGGAACCCCATACGCAAGAGCTGTTAAGGCTAGACGGAGGATATCTTCAACTGTGAAAGCAATTATAGAGGAAAGAAGAAGACAAGCAGCTGAGACAAGCACTAATTCCAGCAGTAGTAAAAGGAGTGATTTTCTTGAGATACTTATGGATGTTGATACCTTATCTGAAGATGAAAAAGTGAGTTTCATCTTGGATTCTCTATTGGGTGGCTATGAGACTACCTCTCTCTTAATCAGCATGGCAGTTTATTTTCTAGCTCAATCACCTTCTGCATTACAACAATTAAAGGTGGAGCATCAGAACATTAGAAGAGGGAAGCAGAAAGAGGAGTATTTGAACTGGGAAGATTATAAGAAAATGGAGTTTACCCAAAATGTGATCAACGAAGCTCTCAGATGTGGAAACGTTGTAAAATTCGTGCACCGAAAGGCTCTCAAAGATGTGAAATTTAGAGATTATTTAATTCCATCTGGCTGGAAAGTTCTACCCGTCTTTAGTGCAGCTCATTTGGACCCTTCCCTTCATGCAAGTGCTCTTGAGTTTCATCCTTGGAGATGGGAGAAAATTCAGAGCCAAGACCAAACGTGCAAGAGATTTACTCCCTTTGGTGGAGGGTCTAGATGCTGTCCTGGATCTGAACTTGGGAAGCTTGAAGTTGCAATTTTTCTCCACCACCTTGTACAGAATTTCAGGTGGAGGACTGAGGATGATGACCAACCCATAGCGTTTCCATACGTGGAATTTCAAAGAGGCCTGCCACTGCACTTGGAGCATTGCCCTATCAATTGA

Protein Analysis

488

Amino Acids

55.4

Weight (kDa)

8.98

Isoelectric Point (pI)

50.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1026
AccB1I GGYRCC 1 cut(s) 197
AclI AACGTT 1 cut(s) 1080
AclWI GGATC 1 cut(s) 1315
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 6 cut(s) 615, 1088, 1121, 1239, 1360, 1415
AcuI CTGAAG 2 cut(s) 290, 861
AfaI GTAC 1 cut(s) 1356
AfiI CCNNNNNNNGG 4 cut(s) 125, 149, 353, 1283
AjnI CCWGG 2 cut(s) 673, 1303
AjuI GAANNNNNNNTTGG 1 cut(s) 33
AleI CACNNNNGTG 1 cut(s) 269
AluBI AGCT 9 cut(s) 289, 336, 372, 695, 764, 932, 1064, 1178, 1324
AluI AGCT 9 cut(s) 289, 336, 372, 695, 764, 932, 1064, 1178, 1324
Alw21I GWGCWC 4 cut(s) 291, 374, 1098, 1210
Alw26I GTCTC 5 cut(s) 68, 264, 430, 761, 884
Alw44I GTGCAC 1 cut(s) 1094
AlwI GGATC 1 cut(s) 1315
AoxI GGCC 5 cut(s) 3, 20, 140, 646, 1426
ApaLI GTGCAC 1 cut(s) 1094
ApeKI GCWGC 3 cut(s) 333, 761, 1175
ApoI RAATTY 6 cut(s) 615, 1088, 1121, 1239, 1360, 1415
AspS9I GGNCC 1 cut(s) 1186
AsuHPI GGTGA 2 cut(s) 427, 930
AvaII GGWCC 1 cut(s) 1186
BaeGI GKGCMC 1 cut(s) 1098
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 2 cut(s) 291, 374
BbsI GAAGAC 1 cut(s) 760
Bbv12I GWGCWC 4 cut(s) 291, 374, 1098, 1210
BbvI GCAGC 3 cut(s) 345, 773, 1187
BccI CCATC 4 cut(s) 190, 356, 1150, 1224
BciT130I CCWGG 2 cut(s) 675, 1305
BclI TGATCA 2 cut(s) 280, 1053
BcoDI GTCTC 5 cut(s) 68, 264, 430, 761, 884
BfaI CTAG 5 cut(s) 222, 581, 705, 929, 1293
BisI GCNGC 3 cut(s) 334, 762, 1176
BlsI GCNGC 3 cut(s) 335, 763, 1177
Bme1390I CCNGG 2 cut(s) 675, 1305
Bme18I GGWCC 1 cut(s) 1186
BmgT120I GGNCC 1 cut(s) 1186
BmiI GGNNCC 4 cut(s) 52, 199, 679, 1188
BmrFI CCNGG 2 cut(s) 675, 1305
BmrI ACTGGG 1 cut(s) 1024
BmsI GCATC 2 cut(s) 979, 1286
BmuI ACTGGG 1 cut(s) 1024
BpiI GAAGAC 1 cut(s) 760
BplI GAGNNNNNCTC 4 cut(s) 881, 913, 1258, 1290
Bpu10I CCTNAGC 1 cut(s) 98
BpuEI CTTGAG 2 cut(s) 830, 1232
BsaAI YACGTR 1 cut(s) 1411
BsaI GGTCTC 1 cut(s) 68
BsaJI CCNNGG 4 cut(s) 352, 361, 429, 1223
Bsc4I CCNNNNNNNGG 4 cut(s) 125, 149, 353, 1283
Bse1I ACTGG 1 cut(s) 1019
Bse3DI GCAATG 1 cut(s) 1447
BseBI CCWGG 2 cut(s) 675, 1305
BseDI CCNNGG 4 cut(s) 352, 361, 429, 1223
BseGI GGATG 5 cut(s) 178, 348, 829, 1219, 1387
BseLI CCNNNNNNNGG 4 cut(s) 125, 149, 353, 1283
BseMI GCAATG 1 cut(s) 1447
BseMII CTCAG 6 cut(s) 424, 447, 478, 756, 1081, 1368
BseNI ACTGG 1 cut(s) 1019
BseRI GAGGAG 1 cut(s) 1016
BseSI GKGCMC 1 cut(s) 1098
BseXI GCAGC 3 cut(s) 345, 773, 1187
BsgI GTGCAG 2 cut(s) 1194, 1421
BshFI GGCC 5 cut(s) 5, 22, 142, 648, 1428
BshNI GGYRCC 1 cut(s) 197
BsiHKAI GWGCWC 4 cut(s) 291, 374, 1098, 1210
BsiSI CCGG 1 cut(s) 6
BslFI GGGAC 1 cut(s) 165
BslI CCNNNNNNNGG 4 cut(s) 125, 149, 353, 1283
BsmAI GTCTC 5 cut(s) 68, 264, 430, 761, 884
BsmFI GGGAC 1 cut(s) 165
BsmI GAATGC 1 cut(s) 335
BsnI GGCC 5 cut(s) 5, 22, 142, 648, 1428
Bso31I GGTCTC 1 cut(s) 68
Bsp1286I GDGCHC 4 cut(s) 291, 374, 1098, 1210
Bsp1407I TGTACA 1 cut(s) 1354
Bsp143I GATC 3 cut(s) 280, 1053, 1307
Bsp19I CCATGG 1 cut(s) 352
BspANI GGCC 5 cut(s) 5, 22, 142, 648, 1428
BspCNI CTCAG 6 cut(s) 423, 448, 477, 757, 1080, 1369
BspHI TCATGA 1 cut(s) 639
BspLI GGNNCC 4 cut(s) 52, 199, 679, 1188
BspPI GGATC 1 cut(s) 1315
BspT107I GGYRCC 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 68
BsrDI GCAATG 1 cut(s) 1447
BsrGI TGTACA 1 cut(s) 1354
BsrI ACTGG 1 cut(s) 1019
BssECI CCNNGG 4 cut(s) 352, 361, 429, 1223
BssMI GATC 3 cut(s) 280, 1053, 1307
BssT1I CCWWGG 4 cut(s) 352, 361, 429, 1223
Bst2UI CCWGG 2 cut(s) 675, 1305
Bst4CI ACNGT 1 cut(s) 727
Bst6I CTCTTC 1 cut(s) 979
BstAUI TGTACA 1 cut(s) 1354
BstBAI YACGTR 1 cut(s) 1411
BstC8I GCNNGC 1 cut(s) 1430
BstDEI CTNAG 7 cut(s) 98, 410, 456, 464, 765, 1067, 1377
BstDSI CCRYGG 1 cut(s) 352
BstEII GGTNACC 1 cut(s) 433
BstF5I GGATG 5 cut(s) 178, 348, 829, 1219, 1387
BstKTI GATC 3 cut(s) 283, 1056, 1310
BstMAI GTCTC 5 cut(s) 68, 264, 430, 761, 884
BstMBI GATC 3 cut(s) 280, 1053, 1307
BstMWI GCNNNNNNNGC 2 cut(s) 701, 1444
BstNI CCWGG 2 cut(s) 675, 1305
BstPI GGTNACC 1 cut(s) 433
BstSCI CCNGG 2 cut(s) 673, 1303
BstSLI GKGCMC 1 cut(s) 1098
BstV1I GCAGC 3 cut(s) 345, 773, 1187
BstV2I GAAGAC 1 cut(s) 760
BstX2I RGATCY 1 cut(s) 1307
BstXI CCANNNNNNTGG 2 cut(s) 382, 1149
BstYI RGATCY 1 cut(s) 1307
BsuRI GGCC 5 cut(s) 5, 22, 142, 648, 1428
BtgI CCRYGG 1 cut(s) 352
BtsCI GGATG 5 cut(s) 178, 348, 829, 1219, 1387
BtsI GCAGTG 1 cut(s) 1433
BtsIMutI CAGTG 2 cut(s) 472, 1433
Cac8I GCNNGC 1 cut(s) 1430
CciI TCATGA 1 cut(s) 639
Cfr13I GGNCC 1 cut(s) 1186
Csp6I GTAC 1 cut(s) 1355
CspCI CAANNNNNGTGG 2 cut(s) 1422, 1457
CviAII CATG 6 cut(s) 276, 353, 376, 640, 913, 1199
CviQI GTAC 1 cut(s) 1355
DdeI CTNAG 7 cut(s) 98, 410, 456, 464, 765, 1067, 1377
DpnI GATC 3 cut(s) 282, 1055, 1309
DpnII GATC 3 cut(s) 280, 1053, 1307
DraI TTTAAA 2 cut(s) 72, 241
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 979
EarI CTCTTC 1 cut(s) 979
Ecl136II GAGCTC 2 cut(s) 289, 372
Eco130I CCWWGG 4 cut(s) 352, 361, 429, 1223
Eco147I AGGCCT 2 cut(s) 648, 1428
Eco24I GRGCYC 2 cut(s) 291, 374
Eco31I GGTCTC 1 cut(s) 68
Eco32I GATATC 1 cut(s) 717
Eco47I GGWCC 1 cut(s) 1186
Eco53kI GAGCTC 2 cut(s) 289, 372
Eco57I CTGAAG 2 cut(s) 290, 861
Eco91I GGTNACC 1 cut(s) 433
EcoICRI GAGCTC 2 cut(s) 289, 372
EcoO65I GGTNACC 1 cut(s) 433
EcoRI GAATTC 1 cut(s) 615
EcoRII CCWGG 2 cut(s) 673, 1303
EcoRV GATATC 1 cut(s) 717
EcoT14I CCWWGG 4 cut(s) 352, 361, 429, 1223
EcoT38I GRGCYC 2 cut(s) 291, 374
ErhI CCWWGG 4 cut(s) 352, 361, 429, 1223
FaeI CATG 6 cut(s) 279, 356, 379, 643, 916, 1202
FaqI GGGAC 1 cut(s) 165
FatI CATG 6 cut(s) 275, 352, 375, 639, 912, 1198
FbaI TGATCA 2 cut(s) 280, 1053
Fnu4HI GCNGC 3 cut(s) 334, 762, 1176
FokI GGATG 5 cut(s) 165, 335, 836, 1206, 1394
FriOI GRGCYC 2 cut(s) 291, 374
Fsp4HI GCNGC 3 cut(s) 334, 762, 1176
FspBI CTAG 5 cut(s) 222, 581, 705, 929, 1293
GluI GCNGC 3 cut(s) 334, 762, 1176
HaeIII GGCC 5 cut(s) 5, 22, 142, 648, 1428
HapII CCGG 1 cut(s) 6
Hin1II CATG 6 cut(s) 279, 356, 379, 643, 916, 1202
HindIII AAGCTT 1 cut(s) 1322
HinfI GANTC 2 cut(s) 357, 869
HpaII CCGG 1 cut(s) 6
HphI GGTGA 2 cut(s) 427, 930
Hpy166II GTNNAC 3 cut(s) 552, 1041, 1096
Hpy188I TCNGA 7 cut(s) 309, 413, 841, 975, 1070, 1245, 1312
Hpy188III TCNNGA 8 cut(s) 169, 284, 620, 631, 640, 809, 1211, 1293
Hpy8I GTNNAC 3 cut(s) 552, 1041, 1096
HpyAV CCTTC 7 cut(s) 175, 211, 215, 308, 951, 1200, 1205
HpyCH4III ACNGT 1 cut(s) 727
HpyCH4IV ACGT 3 cut(s) 1080, 1259, 1410
HpyCH4V TGCA 8 cut(s) 333, 947, 1096, 1175, 1202, 1263, 1334, 1438
HpyF10VI GCNNNNNNNGC 2 cut(s) 701, 1444
HpyF3I CTNAG 7 cut(s) 98, 410, 456, 464, 765, 1067, 1377
HpySE526I ACGT 3 cut(s) 1080, 1259, 1410
Hsp92II CATG 6 cut(s) 279, 356, 379, 643, 916, 1202
Ksp22I TGATCA 2 cut(s) 280, 1053
Kzo9I GATC 3 cut(s) 280, 1053, 1307
LmnI GCTCC 4 cut(s) 56, 377, 967, 1444
Lsp1109I GCAGC 3 cut(s) 345, 773, 1187
LweI GCATC 2 cut(s) 979, 1286
MaeI CTAG 5 cut(s) 222, 581, 705, 929, 1293
MaeII ACGT 3 cut(s) 1080, 1259, 1410
MaeIII GTNAC 2 cut(s) 433, 467
MalI GATC 3 cut(s) 282, 1055, 1309
MboI GATC 3 cut(s) 280, 1053, 1307
MboII GAAGA 7 cut(s) 635, 711, 762, 765, 854, 996, 1031
MfeI CAATTG 2 cut(s) 267, 1459
MflI RGATCY 1 cut(s) 1307
MhlI GDGCHC 4 cut(s) 291, 374, 1098, 1210
MseI TTAA 8 cut(s) 71, 89, 105, 240, 699, 905, 959, 1136
MslI CAYNNNNRTG 3 cut(s) 269, 380, 1203
MspA1I CMGCKG 1 cut(s) 764
MspI CCGG 1 cut(s) 6
MspR9I CCNGG 2 cut(s) 675, 1305
MunI CAATTG 2 cut(s) 267, 1459
Mva1269I GAATGC 1 cut(s) 335
MvaI CCWGG 2 cut(s) 675, 1305
MwoI GCNNNNNNNGC 2 cut(s) 701, 1444
NcoI CCATGG 1 cut(s) 352
NdeII GATC 3 cut(s) 280, 1053, 1307
NlaIII CATG 6 cut(s) 279, 356, 379, 643, 916, 1202
NlaIV GGNNCC 4 cut(s) 52, 199, 679, 1188
NmuCI GTSAC 2 cut(s) 433, 467
OliI CACNNNNGTG 1 cut(s) 269
PagI TCATGA 1 cut(s) 639
PceI AGGCCT 2 cut(s) 648, 1428
PctI GAATGC 1 cut(s) 335
PfeI GAWTC 2 cut(s) 357, 869
PfoI TCCNGGA 2 cut(s) 673, 1303
PkrI GCNGC 3 cut(s) 335, 763, 1177
Ppu21I YACGTR 1 cut(s) 1411
PsiI TTATAA 1 cut(s) 1026
Psp124BI GAGCTC 2 cut(s) 291, 374
Psp1406I AACGTT 1 cut(s) 1080
Psp6I CCWGG 2 cut(s) 673, 1303
PspEI GGTNACC 1 cut(s) 433
PspGI CCWGG 2 cut(s) 673, 1303
PspN4I GGNNCC 4 cut(s) 52, 199, 679, 1188
PspPI GGNCC 1 cut(s) 1186
PsuI RGATCY 1 cut(s) 1307
PvuII CAGCTG 1 cut(s) 764
RsaI GTAC 1 cut(s) 1356
RsaNI GTAC 1 cut(s) 1355
RseI CAYNNNNRTG 3 cut(s) 269, 380, 1203
SacI GAGCTC 2 cut(s) 291, 374
SaqAI TTAA 8 cut(s) 71, 89, 105, 240, 699, 905, 959, 1136
SatI GCNGC 3 cut(s) 334, 762, 1176
Sau3AI GATC 3 cut(s) 280, 1053, 1307
Sau96I GGNCC 1 cut(s) 1186
ScrFI CCNGG 2 cut(s) 675, 1305
SduI GDGCHC 4 cut(s) 291, 374, 1098, 1210
SfaNI GCATC 2 cut(s) 979, 1286
SinI GGWCC 1 cut(s) 1186
SmiMI CAYNNNNRTG 3 cut(s) 269, 380, 1203
SmlI CTYRAG 2 cut(s) 809, 1211
SmoI CTYRAG 2 cut(s) 809, 1211
SseBI AGGCCT 2 cut(s) 648, 1428
SspMI CTAG 5 cut(s) 222, 581, 705, 929, 1293
SstI GAGCTC 2 cut(s) 291, 374
StuI AGGCCT 2 cut(s) 648, 1428
StyD4I CCNGG 2 cut(s) 673, 1303
StyI CCWWGG 4 cut(s) 352, 361, 429, 1223
TaaI ACNGT 1 cut(s) 727
TaiI ACGT 3 cut(s) 1083, 1262, 1413
TatI WGTACW 1 cut(s) 1354
TfiI GAWTC 2 cut(s) 357, 869
Tru1I TTAA 8 cut(s) 71, 89, 105, 240, 699, 905, 959, 1136
Tru9I TTAA 8 cut(s) 71, 89, 105, 240, 699, 905, 959, 1136
TscAI CASTG 2 cut(s) 472, 1440
TseFI GTSAC 2 cut(s) 433, 467
TseI GCWGC 3 cut(s) 333, 761, 1175
Tsp45I GTSAC 2 cut(s) 433, 467
TspDTI ATGAA 7 cut(s) 289, 327, 628, 850, 861, 1187, 1208
TspGWI ACGGA 1 cut(s) 724
TspRI CASTG 2 cut(s) 472, 1440
VneI GTGCAC 1 cut(s) 1094
VpaK11BI GGWCC 1 cut(s) 1186
XapI RAATTY 6 cut(s) 615, 1088, 1121, 1239, 1360, 1415
XbaI TCTAGA 1 cut(s) 1292
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XspI CTAG 5 cut(s) 222, 581, 705, 929, 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.