Rh2AG650000

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
86894859 .. 86896781
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG650000.1

Sequence Viewer

Length: 1143 bp
ATGTTTGGATTTTCCCCCATTTTATTATCTTTCTTGCTTGTACTACTACCAGCACTGGCCTATATTCTTCTCATCAAATTGCTTCGAAGTAGACATGCCAAGCTTGCTGATCATGCTGCTAAAAACTTGCCGCCGGGAAGCATGGGATGGCCGGTTTTTGGCGAAACTCTTCACTTCCTCAAGCCTCATTCTTCGGATTCTCCCGGAACCTTCCTGCAACAACACTGCTCTAGGTATGGGAAGGTTTTCAAGTCGCATCTATTTGGTTCGCCGACCATAGTTTCGTGCGACCTTGAGCTCAACATGTTCGTTCTTCAGAACGAAGAGAAGTTCTTCCAAGCCAGTTACCCAAAACCGGTCCATGGCATTCTTGGGAAGTACTCTTTGCTCACCGTCTCCGGTGACCTTCACCGGAAGCTAAGGAACATTGGCGTCAGCTTCATCGCCTCTTCCAAGTCCTCGCCTCATTTTCTTCACTGGATCGAGAAGCTCTCGATCTCGATGATGGACTCGTGGAGTGGCCGAAATCAAGTCTCCTTCTTCAAAGAAGCTAAAACTTTTACACTTCGTCTTATGGTGAAGCACCTCTTGAGTGTTAACCCCGAGGAGGCACTAGCTTCGAGAATATTAGAAGACTTCCAAACGTACATGCGAGGCTTCGTTTCTCTGCCAATAAATCTCCCCGGAACCGCTTATGCCAAGGCTGTTAAGGCTAGAGCGAGGCTTTCTTCGAGTGTCAAGGAGATTATGGAAGGAAGGCGAAAACGGCGAATCGGAGAGCTTGCAGAATTAGGAGAAGGAGAAGTGGACTTTTTAGACGCGATACTGTCGAAACAAAGGCTAAACGACGATGAAATAGTAAGCATTGTGTTGGACATAATGCTGGGAGGGTACGAGACCACCTCAACACTAATGGCCTTGATTGTCTACTTTCTTCATCATTCGCCAATTGCTTTTGCCAAGTTAAAGGAAGAACACCAATCTATAAGGGAAAACAAAGAGGATGAGAGTGCTCCCTTGGACTGGGAAGATTACAAGAAAATGGAGTACTCTTACAATGTTATATGTGAAGCCATGAGATGTGGCAATGTAGTTAAATTTGTGCACAGAAAAGCTCTTCAAGATGTGAAATTTAAAGGTTAA

Protein Analysis

380

Amino Acids

43.08

Weight (kDa)

9.13

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 44 - 380 1.6e-34 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 91, 927
AccII CGCG 1 cut(s) 821
AciI CCGC 2 cut(s) 131, 690
AclWI GGATC 1 cut(s) 488
AcoI YGGCCR 2 cut(s) 149, 520
AcsI RAATTY 2 cut(s) 1097, 1130
AcuI CTGAAG 1 cut(s) 299
AcyI GRCGYC 1 cut(s) 432
AfaI GTAC 5 cut(s) 42, 380, 647, 893, 1049
AfiI CCNNNNNNNGG 5 cut(s) 158, 355, 362, 607, 1023
AflIII ACRYGT 1 cut(s) 303
AgeI ACCGGT 1 cut(s) 355
AgsI TTSAA 3 cut(s) 250, 544, 1121
AluBI AGCT 9 cut(s) 103, 298, 418, 438, 490, 551, 617, 781, 1115
AluI AGCT 9 cut(s) 103, 298, 418, 438, 490, 551, 617, 781, 1115
Alw21I GWGCWC 3 cut(s) 300, 1015, 1107
Alw26I GTCTC 3 cut(s) 400, 538, 890
Alw44I GTGCAC 1 cut(s) 1103
AlwI GGATC 1 cut(s) 488
Ama87I CYCGRG 1 cut(s) 602
AoxI GGCC 4 cut(s) 57, 149, 520, 915
ApaLI GTGCAC 1 cut(s) 1103
ApeKI GCWGC 1 cut(s) 116
ApoI RAATTY 2 cut(s) 1097, 1130
ArsI GACNNNNNNTTYG 2 cut(s) 265, 297
AsiGI ACCGGT 1 cut(s) 355
Asp700I GAANNNNTTC 3 cut(s) 168, 245, 332
AspS9I GGNCC 1 cut(s) 358
AsuC2I CCSGG 3 cut(s) 135, 204, 684
AsuHPI GGTGA 4 cut(s) 382, 401, 413, 589
AsuII TTCGAA 1 cut(s) 85
AvaI CYCGRG 1 cut(s) 602
AvaII GGWCC 1 cut(s) 358
BaeGI GKGCMC 1 cut(s) 1107
BanII GRGCYC 1 cut(s) 300
BauI CACGAG 1 cut(s) 511
BbsI GAAGAC 1 cut(s) 639
Bbv12I GWGCWC 3 cut(s) 300, 1015, 1107
BbvI GCAGC 1 cut(s) 103
BccI CCATC 2 cut(s) 141, 499
BceAI ACGGC 1 cut(s) 782
BcgI CGANNNNNNTGC 2 cut(s) 600, 634
BclI TGATCA 1 cut(s) 109
BcnI CCSGG 3 cut(s) 135, 204, 684
BcoDI GTCTC 3 cut(s) 400, 538, 890
BfaI CTAG 3 cut(s) 231, 614, 714
BisI GCNGC 2 cut(s) 117, 131
BlsI GCNGC 2 cut(s) 118, 132
BmcAI AGTACT 2 cut(s) 380, 1049
Bme1390I CCNGG 3 cut(s) 135, 204, 684
Bme18I GGWCC 1 cut(s) 358
BmeT110I CYCGRG 1 cut(s) 602
BmgT120I GGNCC 1 cut(s) 358
BmiI GGNNCC 2 cut(s) 208, 688
BmrFI CCNGG 3 cut(s) 135, 204, 684
BmrI ACTGGG 1 cut(s) 1033
BmsI GCATC 1 cut(s) 265
BmuI ACTGGG 1 cut(s) 1033
BpiI GAAGAC 1 cut(s) 639
BplI GAGNNNNNCTC 4 cut(s) 476, 508, 887, 919
Bpu10I CCTNAGC 1 cut(s) 419
Bpu14I TTCGAA 1 cut(s) 85
BpuEI CTTGAG 3 cut(s) 164, 314, 610
BpuMI CCSGG 3 cut(s) 135, 204, 684
BsaHI GRCGYC 1 cut(s) 432
BsaI GGTCTC 1 cut(s) 890
BsaJI CCNNGG 5 cut(s) 361, 603, 682, 699, 1017
BsaWI WCCGGW 3 cut(s) 355, 398, 411
Bsc4I CCNNNNNNNGG 5 cut(s) 158, 355, 362, 607, 1023
Bse118I RCCGGY 2 cut(s) 151, 355
Bse1I ACTGG 4 cut(s) 60, 342, 482, 1028
Bse3DI GCAATG 1 cut(s) 1093
BseDI CCNNGG 5 cut(s) 361, 603, 682, 699, 1017
BseGI GGATG 2 cut(s) 152, 1009
BseLI CCNNNNNNNGG 5 cut(s) 158, 355, 362, 607, 1023
BseMI GCAATG 1 cut(s) 1093
BseNI ACTGG 4 cut(s) 60, 342, 482, 1028
BseRI GAGGAG 1 cut(s) 620
BseSI GKGCMC 1 cut(s) 1107
BseXI GCAGC 1 cut(s) 103
BseYI CCCAGC 1 cut(s) 883
Bsh1236I CGCG 1 cut(s) 821
BshFI GGCC 4 cut(s) 59, 151, 522, 917
BshTI ACCGGT 1 cut(s) 355
BsiHKAI GWGCWC 3 cut(s) 300, 1015, 1107
BsiHKCI CYCGRG 1 cut(s) 602
BsiSI CCGG 7 cut(s) 134, 152, 204, 356, 399, 412, 684
BslI CCNNNNNNNGG 5 cut(s) 158, 355, 362, 607, 1023
BsmAI GTCTC 3 cut(s) 400, 538, 890
BsmBI CGTCTC 1 cut(s) 400
BsmI GAATGC 1 cut(s) 366
BsnI GGCC 4 cut(s) 59, 151, 522, 917
Bso31I GGTCTC 1 cut(s) 890
BsoBI CYCGRG 1 cut(s) 602
Bsp119I TTCGAA 1 cut(s) 85
Bsp1286I GDGCHC 3 cut(s) 300, 1015, 1107
Bsp143I GATC 3 cut(s) 109, 480, 495
Bsp19I CCATGG 1 cut(s) 361
BspACI CCGC 2 cut(s) 131, 690
BspANI GGCC 4 cut(s) 59, 151, 522, 917
BspFNI CGCG 1 cut(s) 821
BspLI GGNNCC 2 cut(s) 208, 688
BspPI GGATC 1 cut(s) 488
BspQI GCTCTTC 1 cut(s) 1122
BspT104I TTCGAA 1 cut(s) 85
BspTNI GGTCTC 1 cut(s) 890
BsrDI GCAATG 1 cut(s) 1093
BsrFI RCCGGY 2 cut(s) 151, 355
BsrI ACTGG 4 cut(s) 60, 342, 482, 1028
BssAI RCCGGY 2 cut(s) 151, 355
BssECI CCNNGG 5 cut(s) 361, 603, 682, 699, 1017
BssMI GATC 3 cut(s) 109, 480, 495
BssNI GRCGYC 1 cut(s) 432
BssSI CACGAG 1 cut(s) 511
BssT1I CCWWGG 3 cut(s) 361, 699, 1017
Bst2BI CACGAG 1 cut(s) 511
Bst4CI ACNGT 2 cut(s) 394, 828
Bst6I CTCTTC 4 cut(s) 174, 318, 454, 1122
BstACI GRCGYC 1 cut(s) 432
BstBI TTCGAA 1 cut(s) 85
BstC8I GCNNGC 2 cut(s) 105, 783
BstDEI CTNAG 1 cut(s) 419
BstDSI CCRYGG 1 cut(s) 361
BstEII GGTNACC 1 cut(s) 401
BstF5I GGATG 2 cut(s) 152, 1009
BstFNI CGCG 1 cut(s) 821
BstKTI GATC 3 cut(s) 112, 483, 498
BstMAI GTCTC 3 cut(s) 400, 538, 890
BstMBI GATC 3 cut(s) 109, 480, 495
BstMWI GCNNNNNNNGC 4 cut(s) 104, 113, 710, 766
BstNSI RCATGY 3 cut(s) 98, 307, 652
BstPI GGTNACC 1 cut(s) 401
BstSCI CCNGG 3 cut(s) 133, 202, 682
BstSLI GKGCMC 1 cut(s) 1107
BstUI CGCG 1 cut(s) 821
BstV1I GCAGC 1 cut(s) 103
BstV2I GAAGAC 1 cut(s) 639
BsuRI GGCC 4 cut(s) 59, 151, 522, 917
BtgI CCRYGG 1 cut(s) 361
BtgZI GCGATG 1 cut(s) 427
BtsCI GGATG 2 cut(s) 152, 1009
BtsI GCAGTG 1 cut(s) 223
BtsIMutI CAGTG 3 cut(s) 53, 223, 475
Cac8I GCNNGC 2 cut(s) 105, 783
Cfr10I RCCGGY 2 cut(s) 151, 355
Cfr13I GGNCC 1 cut(s) 358
CseI GACGC 2 cut(s) 421, 827
Csp6I GTAC 5 cut(s) 41, 379, 646, 892, 1048
CspAI ACCGGT 1 cut(s) 355
CviAII CATG 7 cut(s) 95, 113, 142, 304, 362, 649, 1075
CviQI GTAC 5 cut(s) 41, 379, 646, 892, 1048
DdeI CTNAG 1 cut(s) 419
DpnI GATC 3 cut(s) 111, 482, 497
DpnII GATC 3 cut(s) 109, 480, 495
DraI TTTAAA 1 cut(s) 1135
EaeI YGGCCR 2 cut(s) 149, 520
Eam1104I CTCTTC 4 cut(s) 174, 318, 454, 1122
EarI CTCTTC 4 cut(s) 174, 318, 454, 1122
Ecl136II GAGCTC 1 cut(s) 298
Eco130I CCWWGG 3 cut(s) 361, 699, 1017
Eco24I GRGCYC 1 cut(s) 300
Eco31I GGTCTC 1 cut(s) 890
Eco47I GGWCC 1 cut(s) 358
Eco53kI GAGCTC 1 cut(s) 298
Eco57I CTGAAG 1 cut(s) 299
Eco88I CYCGRG 1 cut(s) 602
Eco91I GGTNACC 1 cut(s) 401
EcoICRI GAGCTC 1 cut(s) 298
EcoO65I GGTNACC 1 cut(s) 401
EcoT14I CCWWGG 3 cut(s) 361, 699, 1017
EcoT38I GRGCYC 1 cut(s) 300
ErhI CCWWGG 3 cut(s) 361, 699, 1017
Esp3I CGTCTC 1 cut(s) 400
FaeI CATG 7 cut(s) 98, 116, 145, 307, 365, 652, 1078
FalI AAGNNNNNCTT 2 cut(s) 572, 604
FatI CATG 7 cut(s) 94, 112, 141, 303, 361, 648, 1074
FbaI TGATCA 1 cut(s) 109
FblI GTMKAC 2 cut(s) 91, 927
Fnu4HI GCNGC 2 cut(s) 117, 131
FokI GGATG 2 cut(s) 159, 1016
FriOI GRGCYC 1 cut(s) 300
Fsp4HI GCNGC 2 cut(s) 117, 131
FspBI CTAG 3 cut(s) 231, 614, 714
GluI GCNGC 2 cut(s) 117, 131
GsaI CCCAGC 1 cut(s) 887
HaeIII GGCC 4 cut(s) 59, 151, 522, 917
HapII CCGG 7 cut(s) 134, 152, 204, 356, 399, 412, 684
HgaI GACGC 2 cut(s) 421, 827
Hin1I GRCGYC 1 cut(s) 432
Hin1II CATG 7 cut(s) 98, 116, 145, 307, 365, 652, 1078
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HindIII AAGCTT 1 cut(s) 101
HinfI GANTC 3 cut(s) 197, 509, 771
HpaI GTTAAC 1 cut(s) 598
HpaII CCGG 7 cut(s) 134, 152, 204, 356, 399, 412, 684
HphI GGTGA 4 cut(s) 382, 401, 413, 589
Hpy166II GTNNAC 5 cut(s) 92, 598, 808, 928, 1105
Hpy188I TCNGA 3 cut(s) 196, 318, 776
Hpy188III TCNNGA 6 cut(s) 484, 493, 499, 589, 621, 1121
Hpy8I GTNNAC 5 cut(s) 92, 598, 808, 928, 1105
Hpy99I CGWCG 1 cut(s) 851
HpyAV CCTTC 7 cut(s) 220, 235, 416, 547, 746, 750, 791
HpyCH4III ACNGT 2 cut(s) 394, 828
HpyCH4IV ACGT 1 cut(s) 644
HpyCH4V TGCA 3 cut(s) 217, 785, 1105
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 113, 710, 766
HpyF3I CTNAG 1 cut(s) 419
HpySE526I ACGT 1 cut(s) 644
Hsp92I GRCGYC 1 cut(s) 432
Hsp92II CATG 7 cut(s) 98, 116, 145, 307, 365, 652, 1078
Ksp22I TGATCA 1 cut(s) 109
KspAI GTTAAC 1 cut(s) 598
Kzo9I GATC 3 cut(s) 109, 480, 495
LguI GCTCTTC 1 cut(s) 1122
LmnI GCTCC 1 cut(s) 1018
Lsp1109I GCAGC 1 cut(s) 103
LweI GCATC 1 cut(s) 265
MaeI CTAG 3 cut(s) 231, 614, 714
MaeII ACGT 1 cut(s) 644
MaeIII GTNAC 2 cut(s) 344, 401
MalI GATC 3 cut(s) 111, 482, 497
MboI GATC 3 cut(s) 109, 480, 495
MfeI CAATTG 1 cut(s) 948
MhlI GDGCHC 3 cut(s) 300, 1015, 1107
MluCI AATT 5 cut(s) 77, 788, 948, 1097, 1130
MlyI GAGTC 1 cut(s) 503
MmeI TCCRAC 1 cut(s) 852
MroXI GAANNNNTTC 3 cut(s) 168, 245, 332
MseI TTAA 6 cut(s) 597, 708, 965, 1095, 1134, 1141
MspI CCGG 7 cut(s) 134, 152, 204, 356, 399, 412, 684
MspR9I CCNGG 3 cut(s) 135, 204, 684
MunI CAATTG 1 cut(s) 948
Mva1269I GAATGC 1 cut(s) 366
MvnI CGCG 1 cut(s) 821
MwoI GCNNNNNNNGC 4 cut(s) 104, 113, 710, 766
NciI CCSGG 3 cut(s) 135, 204, 684
NcoI CCATGG 1 cut(s) 361
NdeII GATC 3 cut(s) 109, 480, 495
NlaIII CATG 7 cut(s) 98, 116, 145, 307, 365, 652, 1078
NlaIV GGNNCC 2 cut(s) 208, 688
NmuCI GTSAC 1 cut(s) 401
NspI RCATGY 3 cut(s) 98, 307, 652
NspV TTCGAA 1 cut(s) 85
PciI ACATGT 1 cut(s) 303
PciSI GCTCTTC 1 cut(s) 1122
PctI GAATGC 1 cut(s) 366
PdmI GAANNNNTTC 3 cut(s) 168, 245, 332
PfeI GAWTC 2 cut(s) 197, 771
PfoI TCCNGGA 1 cut(s) 202
PinAI ACCGGT 1 cut(s) 355
PkrI GCNGC 2 cut(s) 118, 132
PleI GAGTC 1 cut(s) 503
PpsI GAGTC 1 cut(s) 503
PscI ACATGT 1 cut(s) 303
Psp124BI GAGCTC 1 cut(s) 300
PspEI GGTNACC 1 cut(s) 401
PspFI CCCAGC 1 cut(s) 883
PspN4I GGNNCC 2 cut(s) 208, 688
PspPI GGNCC 1 cut(s) 358
RsaI GTAC 5 cut(s) 42, 380, 647, 893, 1049
RsaNI GTAC 5 cut(s) 41, 379, 646, 892, 1048
SacI GAGCTC 1 cut(s) 300
SapI GCTCTTC 1 cut(s) 1122
SaqAI TTAA 6 cut(s) 597, 708, 965, 1095, 1134, 1141
SatI GCNGC 2 cut(s) 117, 131
Sau3AI GATC 3 cut(s) 109, 480, 495
Sau96I GGNCC 1 cut(s) 358
ScaI AGTACT 2 cut(s) 380, 1049
SchI GAGTC 1 cut(s) 503
ScrFI CCNGG 3 cut(s) 135, 204, 684
SduI GDGCHC 3 cut(s) 300, 1015, 1107
SfaNI GCATC 1 cut(s) 265
SfuI TTCGAA 1 cut(s) 85
SinI GGWCC 1 cut(s) 358
SmlI CTYRAG 3 cut(s) 179, 293, 589
SmoI CTYRAG 3 cut(s) 179, 293, 589
Sse9I AATT 5 cut(s) 77, 788, 948, 1097, 1130
SsiI CCGC 2 cut(s) 131, 690
SspI AATATT 1 cut(s) 627
SspMI CTAG 3 cut(s) 231, 614, 714
SstI GAGCTC 1 cut(s) 300
StyD4I CCNGG 3 cut(s) 133, 202, 682
StyI CCWWGG 3 cut(s) 361, 699, 1017
TaaI ACNGT 2 cut(s) 394, 828
TaiI ACGT 1 cut(s) 647
TaqI TCGA 7 cut(s) 85, 483, 494, 500, 620, 731, 830
TasI AATT 5 cut(s) 77, 788, 948, 1097, 1130
TatI WGTACW 3 cut(s) 40, 378, 1047
TauI GCSGC 1 cut(s) 133
TfiI GAWTC 2 cut(s) 197, 771
Tru1I TTAA 6 cut(s) 597, 708, 965, 1095, 1134, 1141
Tru9I TTAA 6 cut(s) 597, 708, 965, 1095, 1134, 1141
TscAI CASTG 3 cut(s) 60, 230, 482
TseFI GTSAC 1 cut(s) 401
TseI GCWGC 1 cut(s) 116
Tsp45I GTSAC 1 cut(s) 401
TspDTI ATGAA 3 cut(s) 430, 867, 926
TspRI CASTG 3 cut(s) 60, 230, 482
VneI GTGCAC 1 cut(s) 1103
VpaK11BI GGWCC 1 cut(s) 358
XapI RAATTY 2 cut(s) 1097, 1130
XceI RCATGY 3 cut(s) 98, 307, 652
XcmI CCANNNNNNNNNTGG 1 cut(s) 368
XmiI GTMKAC 2 cut(s) 91, 927
XmnI GAANNNNTTC 3 cut(s) 168, 245, 332
XspI CTAG 3 cut(s) 231, 614, 714
ZrmI AGTACT 2 cut(s) 380, 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.