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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g13281 |
| rosa_chinensis | RchiOBHm_Chr1g0356191 RchiOBHm_Chr1g0375381 |
| rosa_laevigata | RLG00000026665 |
| rosa_multiflora | Rmu_sc0000517.1_g000006 Rmu_sc0000554.1_g000042 Rmu_sc0002609.1_g000001 Rmu_sc0021866.1_g000001 Rmu_ssc0000106.1_g000002 |
| rosa_roxburghii | Rroxscaffold_165G00436950 Rroxscaffold_1G00049280 Rroxscaffold_2G00085540 Rroxscaffold_2G00101950 Rroxscaffold_2G00103670 Rroxscaffold_2G00136280 Rroxscaffold_3G00219990 Rroxscaffold_3G00223240 Rroxscaffold_3G00230840 Rroxscaffold_3G00248820 Rroxscaffold_4G00312690 Rroxscaffold_4G00320990 Rroxscaffold_5G00348860 Rroxscaffold_5G00356520 Rroxscaffold_6G00409490 Rroxscaffold_6G00411400 Rroxscaffold_7G00176940 |
| rosa_rugosa | Rorug02G0028800 |
| rosa_samantha | Rh1AG401200 Rh1BG362900 Rh1CG376400 Rh1DG393700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 60, 172, 330 |
| AcsI | RAATTY | 1 cut(s) | 217 |
| AgsI | TTSAA | 2 cut(s) | 214, 349 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 194, 226 |
| AluBI | AGCT | 2 cut(s) | 263, 358 |
| AluI | AGCT | 2 cut(s) | 263, 358 |
| AoxI | GGCC | 1 cut(s) | 176 |
| ApoI | RAATTY | 1 cut(s) | 217 |
| AspLEI | GCGC | 1 cut(s) | 329 |
| AsuII | TTCGAA | 1 cut(s) | 257 |
| BauI | CACGAG | 1 cut(s) | 264 |
| BccI | CCATC | 1 cut(s) | 80 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BfoI | RGCGCY | 1 cut(s) | 330 |
| BisI | GCNGC | 1 cut(s) | 330 |
| BlsI | GCNGC | 1 cut(s) | 331 |
| BmsI | GCATC | 1 cut(s) | 87 |
| Bpu14I | TTCGAA | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 1 cut(s) | 120 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 101, 131 |
| Bse118I | RCCGGY | 1 cut(s) | 178 |
| BseDI | CCNNGG | 1 cut(s) | 120 |
| BseGI | GGATG | 1 cut(s) | 286 |
| Bsh1285I | CGRYCG | 1 cut(s) | 364 |
| BshFI | GGCC | 1 cut(s) | 178 |
| BsiEI | CGRYCG | 1 cut(s) | 364 |
| BsiSI | CCGG | 1 cut(s) | 179 |
| BsnI | GGCC | 1 cut(s) | 178 |
| Bsp119I | TTCGAA | 1 cut(s) | 257 |
| Bsp143I | GATC | 2 cut(s) | 283, 361 |
| BspACI | CCGC | 3 cut(s) | 60, 172, 330 |
| BspANI | GGCC | 1 cut(s) | 178 |
| BspT104I | TTCGAA | 1 cut(s) | 257 |
| BsrFI | RCCGGY | 1 cut(s) | 178 |
| BssAI | RCCGGY | 1 cut(s) | 178 |
| BssECI | CCNNGG | 1 cut(s) | 120 |
| BssMI | GATC | 2 cut(s) | 283, 361 |
| BssSI | CACGAG | 1 cut(s) | 264 |
| BssT1I | CCWWGG | 1 cut(s) | 120 |
| Bst2BI | CACGAG | 1 cut(s) | 264 |
| Bst4CI | ACNGT | 1 cut(s) | 247 |
| BstBI | TTCGAA | 1 cut(s) | 257 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstH2I | RGCGCY | 1 cut(s) | 330 |
| BstHHI | GCGC | 1 cut(s) | 329 |
| BstKTI | GATC | 2 cut(s) | 286, 364 |
| BstMBI | GATC | 2 cut(s) | 283, 361 |
| BstMCI | CGRYCG | 1 cut(s) | 364 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 338 |
| BsuRI | GGCC | 1 cut(s) | 178 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| BtsIMutI | CAGTG | 1 cut(s) | 243 |
| CfoI | GCGC | 1 cut(s) | 329 |
| Cfr10I | RCCGGY | 1 cut(s) | 178 |
| CviJI | RGCY | 6 cut(s) | 178, 207, 263, 301, 341, 358 |
| CviKI_1 | RGCY | 6 cut(s) | 178, 207, 263, 301, 341, 358 |
| DpnI | GATC | 2 cut(s) | 285, 363 |
| DpnII | GATC | 2 cut(s) | 283, 361 |
| Eco130I | CCWWGG | 1 cut(s) | 120 |
| EcoT14I | CCWWGG | 1 cut(s) | 120 |
| ErhI | CCWWGG | 1 cut(s) | 120 |
| FaiI | YATR | 2 cut(s) | 147, 239 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| Fnu4HI | GCNGC | 1 cut(s) | 330 |
| FokI | GGATG | 1 cut(s) | 273 |
| Fsp4HI | GCNGC | 1 cut(s) | 330 |
| GlaI | GCGC | 1 cut(s) | 328 |
| GluI | GCNGC | 1 cut(s) | 330 |
| HaeII | RGCGCY | 1 cut(s) | 330 |
| HaeIII | GGCC | 1 cut(s) | 178 |
| HapII | CCGG | 1 cut(s) | 179 |
| HhaI | GCGC | 1 cut(s) | 329 |
| Hin6I | GCGC | 1 cut(s) | 327 |
| HinP1I | GCGC | 1 cut(s) | 327 |
| HpaII | CCGG | 1 cut(s) | 179 |
| Hpy188I | TCNGA | 2 cut(s) | 96, 109 |
| Hpy188III | TCNNGA | 2 cut(s) | 214, 266 |
| HpyAV | CCTTC | 1 cut(s) | 197 |
| HpyCH4III | ACNGT | 1 cut(s) | 247 |
| HpyCH4IV | ACGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 1 cut(s) | 162 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 338 |
| HpySE526I | ACGT | 1 cut(s) | 280 |
| HspAI | GCGC | 1 cut(s) | 327 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| Kzo9I | GATC | 2 cut(s) | 283, 361 |
| LmnI | GCTCC | 1 cut(s) | 324 |
| LpnPI | CCDG | 1 cut(s) | 192 |
| LweI | GCATC | 1 cut(s) | 87 |
| MaeII | ACGT | 1 cut(s) | 280 |
| MaeIII | GTNAC | 1 cut(s) | 266 |
| MalI | GATC | 2 cut(s) | 285, 363 |
| MboI | GATC | 2 cut(s) | 283, 361 |
| MboII | GAAGA | 3 cut(s) | 92, 95, 163 |
| MfeI | CAATTG | 1 cut(s) | 303 |
| MluCI | AATT | 2 cut(s) | 217, 303 |
| MmeI | TCCRAC | 2 cut(s) | 94, 349 |
| MnlI | CCTC | 5 cut(s) | 31, 36, 168, 288, 344 |
| MspI | CCGG | 1 cut(s) | 179 |
| MunI | CAATTG | 1 cut(s) | 303 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 338 |
| NdeII | GATC | 2 cut(s) | 283, 361 |
| NmuCI | GTSAC | 1 cut(s) | 266 |
| NspV | TTCGAA | 1 cut(s) | 257 |
| PkrI | GCNGC | 1 cut(s) | 331 |
| Ple19I | CGATCG | 1 cut(s) | 364 |
| PvuI | CGATCG | 1 cut(s) | 364 |
| SatI | GCNGC | 1 cut(s) | 330 |
| Sau3AI | GATC | 2 cut(s) | 283, 361 |
| SetI | ASST | 5 cut(s) | 16, 57, 265, 283, 360 |
| SfaNI | GCATC | 1 cut(s) | 87 |
| SfuI | TTCGAA | 1 cut(s) | 257 |
| Sse9I | AATT | 2 cut(s) | 217, 303 |
| SsiI | CCGC | 3 cut(s) | 60, 172, 330 |
| StyI | CCWWGG | 1 cut(s) | 120 |
| TaaI | ACNGT | 1 cut(s) | 247 |
| TaiI | ACGT | 1 cut(s) | 283 |
| TaqI | TCGA | 4 cut(s) | 141, 257, 360, 364 |
| TasI | AATT | 2 cut(s) | 217, 303 |
| TauI | GCSGC | 1 cut(s) | 332 |
| TscAI | CASTG | 1 cut(s) | 250 |
| TseFI | GTSAC | 1 cut(s) | 266 |
| Tsp45I | GTSAC | 1 cut(s) | 266 |
| TspDTI | ATGAA | 2 cut(s) | 211, 226 |
| TspRI | CASTG | 1 cut(s) | 250 |
| XapI | RAATTY | 1 cut(s) | 217 |