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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g13281 |
| rosa_chinensis | RchiOBHm_Chr1g0356191 RchiOBHm_Chr1g0375381 |
| rosa_laevigata | RLG00000026665 |
| rosa_multiflora | Rmu_sc0000517.1_g000006 Rmu_sc0000554.1_g000042 Rmu_sc0002609.1_g000001 Rmu_sc0021866.1_g000001 Rmu_ssc0000106.1_g000002 |
| rosa_roxburghii | Rroxscaffold_165G00436950 Rroxscaffold_1G00049280 Rroxscaffold_2G00085540 Rroxscaffold_2G00101950 Rroxscaffold_2G00103670 Rroxscaffold_2G00136280 Rroxscaffold_3G00219990 Rroxscaffold_3G00223240 Rroxscaffold_3G00230840 Rroxscaffold_3G00248820 Rroxscaffold_4G00312690 Rroxscaffold_4G00320990 Rroxscaffold_5G00348860 Rroxscaffold_5G00356520 Rroxscaffold_6G00409490 Rroxscaffold_6G00411400 Rroxscaffold_7G00176940 |
| rosa_rugosa | Rorug02G0028800 |
| rosa_samantha | Rh1AG401200 Rh1BG362900 Rh1CG376400 Rh1DG393700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 121 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 148 |
| AgsI | TTSAA | 5 cut(s) | 29, 79, 136, 163, 257 |
| AluBI | AGCT | 1 cut(s) | 301 |
| AluI | AGCT | 1 cut(s) | 301 |
| AoxI | GGCC | 1 cut(s) | 125 |
| AspLEI | GCGC | 1 cut(s) | 278 |
| BauI | CACGAG | 1 cut(s) | 213 |
| BciVI | GTATCC | 1 cut(s) | 175 |
| BclI | TGATCA | 1 cut(s) | 232 |
| BfaI | CTAG | 1 cut(s) | 302 |
| BfoI | RGCGCY | 1 cut(s) | 279 |
| BfuI | GTATCC | 1 cut(s) | 175 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 148 |
| Bse118I | RCCGGY | 1 cut(s) | 127 |
| Bse3DI | GCAATG | 1 cut(s) | 275 |
| BseGI | GGATG | 2 cut(s) | 228, 235 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BseMI | GCAATG | 1 cut(s) | 275 |
| BshFI | GGCC | 1 cut(s) | 127 |
| BsiSI | CCGG | 1 cut(s) | 128 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BsnI | GGCC | 1 cut(s) | 127 |
| Bsp143I | GATC | 1 cut(s) | 232 |
| BspACI | CCGC | 1 cut(s) | 121 |
| BspANI | GGCC | 1 cut(s) | 127 |
| BsrDI | GCAATG | 1 cut(s) | 275 |
| BsrFI | RCCGGY | 1 cut(s) | 127 |
| BssAI | RCCGGY | 1 cut(s) | 127 |
| BssMI | GATC | 1 cut(s) | 232 |
| BssSI | CACGAG | 1 cut(s) | 213 |
| Bst2BI | CACGAG | 1 cut(s) | 213 |
| Bst4CI | ACNGT | 1 cut(s) | 196 |
| Bst6I | CTCTTC | 2 cut(s) | 164, 207 |
| BstF5I | GGATG | 2 cut(s) | 228, 235 |
| BstH2I | RGCGCY | 1 cut(s) | 279 |
| BstHHI | GCGC | 1 cut(s) | 278 |
| BstKTI | GATC | 1 cut(s) | 235 |
| BstMBI | GATC | 1 cut(s) | 232 |
| BsuI | GTATCC | 1 cut(s) | 175 |
| BsuRI | GGCC | 1 cut(s) | 127 |
| BtsCI | GGATG | 2 cut(s) | 228, 235 |
| CfoI | GCGC | 1 cut(s) | 278 |
| Cfr10I | RCCGGY | 1 cut(s) | 127 |
| CviJI | RGCY | 4 cut(s) | 49, 127, 250, 301 |
| CviKI_1 | RGCY | 4 cut(s) | 49, 127, 250, 301 |
| DpnI | GATC | 1 cut(s) | 234 |
| DpnII | GATC | 1 cut(s) | 232 |
| Eam1104I | CTCTTC | 2 cut(s) | 164, 207 |
| EarI | CTCTTC | 2 cut(s) | 164, 207 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| FaiI | YATR | 1 cut(s) | 13 |
| FbaI | TGATCA | 1 cut(s) | 232 |
| FokI | GGATG | 2 cut(s) | 222, 235 |
| FspBI | CTAG | 1 cut(s) | 302 |
| GlaI | GCGC | 1 cut(s) | 277 |
| HaeII | RGCGCY | 1 cut(s) | 279 |
| HaeIII | GGCC | 1 cut(s) | 127 |
| HapII | CCGG | 1 cut(s) | 128 |
| HhaI | GCGC | 1 cut(s) | 278 |
| Hin6I | GCGC | 1 cut(s) | 276 |
| HinP1I | GCGC | 1 cut(s) | 276 |
| HincII | GTYRAC | 1 cut(s) | 23 |
| HindII | GTYRAC | 1 cut(s) | 23 |
| HpaII | CCGG | 1 cut(s) | 128 |
| Hpy166II | GTNNAC | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 58 |
| Hpy188III | TCNNGA | 2 cut(s) | 163, 215 |
| Hpy8I | GTNNAC | 1 cut(s) | 23 |
| HpyCH4III | ACNGT | 1 cut(s) | 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 229 |
| HpySE526I | ACGT | 1 cut(s) | 229 |
| HspAI | GCGC | 1 cut(s) | 276 |
| Ksp22I | TGATCA | 1 cut(s) | 232 |
| Kzo9I | GATC | 1 cut(s) | 232 |
| LmnI | GCTCC | 2 cut(s) | 273, 298 |
| LpnPI | CCDG | 1 cut(s) | 141 |
| MaeI | CTAG | 1 cut(s) | 302 |
| MaeII | ACGT | 1 cut(s) | 229 |
| MaeIII | GTNAC | 1 cut(s) | 196 |
| MalI | GATC | 1 cut(s) | 234 |
| MboI | GATC | 1 cut(s) | 232 |
| MboII | GAAGA | 3 cut(s) | 41, 151, 194 |
| MluCI | AATT | 1 cut(s) | 293 |
| MnlI | CCTC | 6 cut(s) | 11, 117, 167, 172, 211, 290 |
| MseI | TTAA | 1 cut(s) | 242 |
| MspI | CCGG | 1 cut(s) | 128 |
| NdeII | GATC | 1 cut(s) | 232 |
| NmuCI | GTSAC | 1 cut(s) | 196 |
| SaqAI | TTAA | 1 cut(s) | 242 |
| Sau3AI | GATC | 1 cut(s) | 232 |
| SetI | ASST | 3 cut(s) | 22, 232, 303 |
| SgeI | CNNG | 9 cut(s) | 38, 79, 96, 140, 155, 175, 225, 227, 242 |
| Sse9I | AATT | 1 cut(s) | 293 |
| SsiI | CCGC | 1 cut(s) | 121 |
| SspMI | CTAG | 1 cut(s) | 302 |
| TaaI | ACNGT | 1 cut(s) | 196 |
| TaiI | ACGT | 1 cut(s) | 232 |
| TasI | AATT | 1 cut(s) | 293 |
| Tru1I | TTAA | 1 cut(s) | 242 |
| Tru9I | TTAA | 1 cut(s) | 242 |
| TseFI | GTSAC | 1 cut(s) | 196 |
| Tsp45I | GTSAC | 1 cut(s) | 196 |
| TspDTI | ATGAA | 1 cut(s) | 239 |
| XspI | CTAG | 1 cut(s) | 302 |