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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g13281 |
| rosa_chinensis | RchiOBHm_Chr1g0356191 RchiOBHm_Chr1g0375381 |
| rosa_laevigata | RLG00000026665 |
| rosa_multiflora | Rmu_sc0000517.1_g000006 Rmu_sc0000554.1_g000042 Rmu_sc0002609.1_g000001 Rmu_sc0021866.1_g000001 Rmu_ssc0000106.1_g000002 |
| rosa_roxburghii | Rroxscaffold_165G00436950 Rroxscaffold_1G00049280 Rroxscaffold_2G00085540 Rroxscaffold_2G00101950 Rroxscaffold_2G00103670 Rroxscaffold_2G00136280 Rroxscaffold_3G00219990 Rroxscaffold_3G00223240 Rroxscaffold_3G00230840 Rroxscaffold_3G00248820 Rroxscaffold_4G00312690 Rroxscaffold_4G00320990 Rroxscaffold_5G00348860 Rroxscaffold_5G00356520 Rroxscaffold_6G00409490 Rroxscaffold_6G00411400 Rroxscaffold_7G00176940 |
| rosa_rugosa | Rorug02G0028800 |
| rosa_samantha | Rh1AG401200 Rh1BG362900 Rh1CG376400 Rh1DG393700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 31 |
| AclWI | GGATC | 1 cut(s) | 159 |
| AcoI | YGGCCR | 1 cut(s) | 26 |
| AlwI | GGATC | 1 cut(s) | 159 |
| AoxI | GGCC | 1 cut(s) | 26 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 13 |
| BanI | GGYRCC | 1 cut(s) | 31 |
| BbsI | GAAGAC | 1 cut(s) | 16 |
| BccI | CCATC | 2 cut(s) | 53, 164 |
| BmiI | GGNNCC | 2 cut(s) | 33, 175 |
| BpiI | GAAGAC | 1 cut(s) | 16 |
| Bpu10I | CCTNAGC | 1 cut(s) | 69 |
| BsaJI | CCNNGG | 1 cut(s) | 89 |
| Bse118I | RCCGGY | 1 cut(s) | 28 |
| Bse3DI | GCAATG | 2 cut(s) | 51, 81 |
| BseDI | CCNNGG | 1 cut(s) | 89 |
| BseMI | GCAATG | 2 cut(s) | 51, 81 |
| BseMII | CTCAG | 1 cut(s) | 102 |
| BseX3I | CGGCCG | 1 cut(s) | 26 |
| Bsh1285I | CGRYCG | 1 cut(s) | 29 |
| BshFI | GGCC | 1 cut(s) | 28 |
| BshNI | GGYRCC | 1 cut(s) | 31 |
| BsiEI | CGRYCG | 1 cut(s) | 29 |
| BsiSI | CCGG | 1 cut(s) | 29 |
| BsnI | GGCC | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 151 |
| Bsp19I | CCATGG | 1 cut(s) | 89 |
| BspANI | GGCC | 1 cut(s) | 28 |
| BspCNI | CTCAG | 1 cut(s) | 103 |
| BspLI | GGNNCC | 2 cut(s) | 33, 175 |
| BspPI | GGATC | 1 cut(s) | 159 |
| BspT107I | GGYRCC | 1 cut(s) | 31 |
| BsrDI | GCAATG | 2 cut(s) | 51, 81 |
| BsrFI | RCCGGY | 1 cut(s) | 28 |
| BssAI | RCCGGY | 1 cut(s) | 28 |
| BssECI | CCNNGG | 1 cut(s) | 89 |
| BssMI | GATC | 1 cut(s) | 151 |
| BssT1I | CCWWGG | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 1 cut(s) | 66 |
| BstDEI | CTNAG | 2 cut(s) | 69, 111 |
| BstDSI | CCRYGG | 1 cut(s) | 89 |
| BstKTI | GATC | 1 cut(s) | 154 |
| BstMBI | GATC | 1 cut(s) | 151 |
| BstMCI | CGRYCG | 1 cut(s) | 29 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 128 |
| BstV2I | GAAGAC | 1 cut(s) | 16 |
| BstX2I | RGATCY | 1 cut(s) | 151 |
| BstYI | RGATCY | 1 cut(s) | 151 |
| BstZI | CGGCCG | 1 cut(s) | 26 |
| BsuRI | GGCC | 1 cut(s) | 28 |
| BtgI | CCRYGG | 1 cut(s) | 89 |
| Cac8I | GCNNGC | 1 cut(s) | 66 |
| Cfr10I | RCCGGY | 1 cut(s) | 28 |
| CviAII | CATG | 1 cut(s) | 90 |
| CviJI | RGCY | 6 cut(s) | 28, 50, 64, 116, 131, 174 |
| CviKI_1 | RGCY | 6 cut(s) | 28, 50, 64, 116, 131, 174 |
| DdeI | CTNAG | 2 cut(s) | 69, 111 |
| DpnI | GATC | 1 cut(s) | 153 |
| DpnII | GATC | 1 cut(s) | 151 |
| EaeI | YGGCCR | 1 cut(s) | 26 |
| EagI | CGGCCG | 1 cut(s) | 26 |
| EclXI | CGGCCG | 1 cut(s) | 26 |
| Eco130I | CCWWGG | 1 cut(s) | 89 |
| Eco52I | CGGCCG | 1 cut(s) | 26 |
| EcoT14I | CCWWGG | 1 cut(s) | 89 |
| ErhI | CCWWGG | 1 cut(s) | 89 |
| FaeI | CATG | 1 cut(s) | 93 |
| FaiI | YATR | 4 cut(s) | 91, 126, 137, 160 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 33 |
| FatI | CATG | 1 cut(s) | 89 |
| HaeIII | GGCC | 1 cut(s) | 28 |
| HapII | CCGG | 1 cut(s) | 29 |
| Hin1II | CATG | 1 cut(s) | 93 |
| HpaII | CCGG | 1 cut(s) | 29 |
| Hpy188I | TCNGA | 2 cut(s) | 151, 178 |
| Hpy188III | TCNNGA | 1 cut(s) | 98 |
| HpyCH4V | TGCA | 1 cut(s) | 79 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 128 |
| HpyF3I | CTNAG | 2 cut(s) | 69, 111 |
| Hsp92II | CATG | 1 cut(s) | 93 |
| Kzo9I | GATC | 1 cut(s) | 151 |
| LmnI | GCTCC | 1 cut(s) | 179 |
| LpnPI | CCDG | 2 cut(s) | 42, 111 |
| MalI | GATC | 1 cut(s) | 153 |
| MboI | GATC | 1 cut(s) | 151 |
| MboII | GAAGA | 1 cut(s) | 21 |
| MflI | RGATCY | 1 cut(s) | 151 |
| MluCI | AATT | 2 cut(s) | 80, 141 |
| MnlI | CCTC | 1 cut(s) | 106 |
| MroXI | GAANNNNTTC | 1 cut(s) | 13 |
| MspI | CCGG | 1 cut(s) | 29 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 128 |
| NcoI | CCATGG | 1 cut(s) | 89 |
| NdeII | GATC | 1 cut(s) | 151 |
| NlaIII | CATG | 1 cut(s) | 93 |
| NlaIV | GGNNCC | 2 cut(s) | 33, 175 |
| PdmI | GAANNNNTTC | 1 cut(s) | 13 |
| PspN4I | GGNNCC | 2 cut(s) | 33, 175 |
| PsuI | RGATCY | 1 cut(s) | 151 |
| Sau3AI | GATC | 1 cut(s) | 151 |
| SgeI | CNNG | 5 cut(s) | 41, 77, 102, 110, 160 |
| Sse9I | AATT | 2 cut(s) | 80, 141 |
| StyI | CCWWGG | 1 cut(s) | 89 |
| TaqI | TCGA | 1 cut(s) | 7 |
| TasI | AATT | 2 cut(s) | 80, 141 |
| XmnI | GAANNNNTTC | 1 cut(s) | 13 |