FvH4_2g09890

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
8737266 .. 8740523
3258 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g09890.t1

Sequence Viewer

Length: 1431 bp
ATGAAGAGGATGGGTGTGTTGGGATTACTTTGTGCTTCTACTTGGTCCATACATAGGGCAGCTATATTTGTAGTATTGGGTATGATTTTGAACCTGGGAGTGGTGTGTAATGGAGGCAAAACTAGCACTTTTGTTAGGCAAATTGACAGAGGCTTGGATATGCCTCTTGACAGTGATGTGTTTAAAGTCCCTCCAGGCTACAATGCACCTCAACAAGTTCATATAACGCAAGGCGACCGTCATGGGAAGGGTGTGATTGTGTCATGGGTGACTGTGGATGAACCAGGTTCCAGTACTGTGCTTTACTGGAGTGCAAATGGGAAGCAAATGAAGGCTGAGGGAAAAGTTAAAACCTATAACTTCTACAATTACACTTCTGGTTACATTCACCACACCACAATCAAAAAACTAAAGTTCAATACCAAATATTACTATGTCGTTGGAATCGGCCACACTGAGCGGCAGTTCTGGTTTGTAACTCCTCCTAAAGTTGGTCCAGACGTCCCTTACACCTTTGGTCTCATAGGGGATCTGGGTCAGACCTTTGATTCAAACAAGACACTAACCCATTATGAGAGAAATCCATTGGAAGGAGAAATGGTTTTATTTGTTGGTGACCTCTCGTATGCGGATGACTACCCTGATCATGATAATGTCAGATGGGATACATGGGGAAGATTCACAGAGCGAAGTGTTGCTTATCAACCTTGGATATGGACTGCAGGGAATCATGAAATTGATTTGGCCCCTGAAATTGGTGAAACAAAATCGTTTAAGCCTTACACGCATCGGTATCATGTCCCATATAAAGCATCAGGAAGTACTGCTCCTTATTGGTACTCAATCAAGAGAGCTTCATCCTACATCATTGTCTTAGCTTCATATTCCGCATATGGTAAATACACTCCTCAGTACCTATGGCTTGAGCAAGAGCTATCAAAAGTTAATAGAAGTGAGACACCATGGTTAATTGTCTTAATGCATTCCCCATGGTATAATAGCTATAACTATCACTATATGGAAGGAGAAAGCATGAGAGTGATGTTTGAGCCCTGGTTTGTACAGTACAAAGTCGATGTGGTATTCTCTGGTCATGTCCATGCCTATGAACGATCTGAACGCATATCCAATGTTGCATATAACATTACAAATGGTAATTGCATTCCTGTGAAAGATCAATCTGCTCCTGTGTATATTACCATTGGGGATGGAGGAAATCTTGAAGGCTTAGCAACCTCCATGACAGAGCCACAGCCCGAGTACTCGGCCTATCGAGAGGCCAGCTTTGGTCATGCCATTTTTGACATCAAGAACCGAAGCCATGCTTATTTTGGCTGGCACCGTAATCAAGATGGATATGCTGTAGAAGCTGATTCTATGATGTTCTTGAATAGACACTTTCTTCCTCTTGATGATTCCACAAGTGCTTGA

Protein Analysis

477

Amino Acids

54.43

Weight (kDa)

6.55

Isoelectric Point (pI)

34.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 70 - 160 1.4e-17 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 171 - 369 5.9e-28 Calcineurin-like phosphoesterase
Metallophos_C PF14008 395 - 454 1.1e-18 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 504
AccB1I GGYRCC 1 cut(s) 1338
AccBSI CCGCTC 1 cut(s) 460
AciI CCGC 3 cut(s) 460, 629, 888
AclWI GGATC 1 cut(s) 537
AcoI YGGCCR 1 cut(s) 448
AcyI GRCGYC 1 cut(s) 501
AfaI GTAC 7 cut(s) 295, 823, 839, 914, 1062, 1067, 1262
AfiI CCNNNNNNNGG 5 cut(s) 54, 100, 491, 590, 755
AgsI TTSAA 5 cut(s) 91, 418, 552, 1223, 1390
AjnI CCWGG 4 cut(s) 93, 193, 283, 1052
AluBI AGCT 7 cut(s) 62, 854, 878, 934, 1002, 1284, 1370
AluI AGCT 7 cut(s) 62, 854, 878, 934, 1002, 1284, 1370
Alw26I GTCTC 2 cut(s) 524, 950
AlwI GGATC 1 cut(s) 537
Ama87I CYCGRG 1 cut(s) 1256
AoxI GGCC 4 cut(s) 448, 744, 1266, 1278
ApeKI GCWGC 1 cut(s) 59
AspS9I GGNCC 3 cut(s) 45, 494, 745
AsuHPI GGTGA 4 cut(s) 280, 380, 626, 770
AvaI CYCGRG 1 cut(s) 1256
AvaII GGWCC 2 cut(s) 45, 494
BanI GGYRCC 1 cut(s) 1338
BanII GRGCYC 1 cut(s) 1053
BbvCI CCTCAGC 1 cut(s) 336
BbvI GCAGC 1 cut(s) 71
BccI CCATC 4 cut(s) 4, 654, 1202, 1346
BciT130I CCWGG 4 cut(s) 95, 195, 285, 1054
BciVI GTATCC 1 cut(s) 658
BclI TGATCA 1 cut(s) 643
BcoDI GTCTC 2 cut(s) 524, 950
BfaI CTAG 1 cut(s) 123
BfmI CTRYAG 2 cut(s) 720, 1362
BfuI GTATCC 1 cut(s) 658
BisI GCNGC 2 cut(s) 60, 461
BlpI GCTNAGC 1 cut(s) 1228
BlsI GCNGC 2 cut(s) 61, 462
BmcAI AGTACT 3 cut(s) 295, 823, 1262
Bme1390I CCNGG 4 cut(s) 95, 195, 285, 1054
Bme18I GGWCC 2 cut(s) 45, 494
BmeT110I CYCGRG 1 cut(s) 1256
BmgT120I GGNCC 3 cut(s) 45, 494, 745
BmiI GGNNCC 3 cut(s) 289, 747, 1340
BmrFI CCNGG 4 cut(s) 95, 195, 285, 1054
BmsI GCATC 2 cut(s) 796, 821
BpmI CTGGAG 2 cut(s) 177, 328
Bpu10I CCTNAGC 1 cut(s) 336
Bpu1102I GCTNAGC 1 cut(s) 1228
BpuEI CTTGAG 1 cut(s) 944
BsaHI GRCGYC 1 cut(s) 501
BsaI GGTCTC 1 cut(s) 524
BsaJI CCNNGG 5 cut(s) 94, 707, 962, 989, 1052
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 5 cut(s) 54, 100, 491, 590, 755
Bse1I ACTGG 2 cut(s) 291, 311
BseBI CCWGG 4 cut(s) 95, 195, 285, 1054
BseDI CCNNGG 5 cut(s) 94, 707, 962, 989, 1052
BseGI GGATG 5 cut(s) 15, 283, 637, 857, 1213
BseLI CCNNNNNNNGG 5 cut(s) 54, 100, 491, 590, 755
BseMII CTCAG 3 cut(s) 327, 447, 923
BseNI ACTGG 2 cut(s) 291, 311
BseRI GAGGAG 2 cut(s) 471, 897
BseXI GCAGC 1 cut(s) 71
Bsh1285I CGRYCG 1 cut(s) 238
BshFI GGCC 4 cut(s) 450, 746, 1268, 1280
BshNI GGYRCC 1 cut(s) 1338
BsiEI CGRYCG 1 cut(s) 238
BsiHKCI CYCGRG 1 cut(s) 1256
BslFI GGGAC 3 cut(s) 173, 488, 785
BslI CCNNNNNNNGG 5 cut(s) 54, 100, 491, 590, 755
BsmAI GTCTC 2 cut(s) 524, 950
BsmFI GGGAC 3 cut(s) 173, 488, 785
BsmI GAATGC 2 cut(s) 982, 1161
BsnI GGCC 4 cut(s) 450, 746, 1268, 1280
Bso31I GGTCTC 1 cut(s) 524
BsoBI CYCGRG 1 cut(s) 1256
Bsp1286I GDGCHC 1 cut(s) 1053
Bsp1407I TGTACA 1 cut(s) 1060
Bsp143I GATC 4 cut(s) 529, 643, 1112, 1174
Bsp1720I GCTNAGC 1 cut(s) 1228
Bsp19I CCATGG 2 cut(s) 962, 989
BspACI CCGC 3 cut(s) 460, 629, 888
BspANI GGCC 4 cut(s) 450, 746, 1268, 1280
BspCNI CTCAG 3 cut(s) 328, 448, 922
BspHI TCATGA 2 cut(s) 646, 730
BspLI GGNNCC 3 cut(s) 289, 747, 1340
BspMAI CTGCAG 1 cut(s) 724
BspPI GGATC 1 cut(s) 537
BspT107I GGYRCC 1 cut(s) 1338
BspTNI GGTCTC 1 cut(s) 524
BsrBI CCGCTC 1 cut(s) 460
BsrGI TGTACA 1 cut(s) 1060
BsrI ACTGG 2 cut(s) 291, 311
BssECI CCNNGG 5 cut(s) 94, 707, 962, 989, 1052
BssMI GATC 4 cut(s) 529, 643, 1112, 1174
BssNI GRCGYC 1 cut(s) 501
BssT1I CCWWGG 3 cut(s) 707, 962, 989
Bst2UI CCWGG 4 cut(s) 95, 195, 285, 1054
Bst4CI ACNGT 6 cut(s) 173, 239, 274, 298, 1065, 1343
BstACI GRCGYC 1 cut(s) 501
BstAUI TGTACA 1 cut(s) 1060
BstC8I GCNNGC 2 cut(s) 1282, 1337
BstDEI CTNAG 5 cut(s) 336, 456, 874, 909, 1228
BstDSI CCRYGG 2 cut(s) 962, 989
BstEII GGTNACC 1 cut(s) 614
BstF5I GGATG 5 cut(s) 15, 283, 637, 857, 1213
BstKTI GATC 4 cut(s) 532, 646, 1115, 1177
BstMAI GTCTC 2 cut(s) 524, 950
BstMBI GATC 4 cut(s) 529, 643, 1112, 1174
BstMCI CGRYCG 1 cut(s) 238
BstMWI GCNNNNNNNGC 3 cut(s) 123, 784, 1367
BstNI CCWGG 4 cut(s) 95, 195, 285, 1054
BstPI GGTNACC 1 cut(s) 614
BstSCI CCNGG 4 cut(s) 93, 193, 283, 1052
BstSFI CTRYAG 2 cut(s) 720, 1362
BstV1I GCAGC 1 cut(s) 71
BstX2I RGATCY 1 cut(s) 529
BstYI RGATCY 1 cut(s) 529
BsuI GTATCC 1 cut(s) 658
BsuRI GGCC 4 cut(s) 450, 746, 1268, 1280
BtgI CCRYGG 2 cut(s) 962, 989
BtsCI GGATG 5 cut(s) 15, 283, 637, 857, 1213
BtsIMutI CAGTG 2 cut(s) 178, 453
Cac8I GCNNGC 2 cut(s) 1282, 1337
CciI TCATGA 2 cut(s) 646, 730
Cfr13I GGNCC 3 cut(s) 45, 494, 745
CsiI ACCWGGT 1 cut(s) 283
Csp6I GTAC 7 cut(s) 294, 822, 838, 913, 1061, 1066, 1261
CviQI GTAC 7 cut(s) 294, 822, 838, 913, 1061, 1066, 1261
DdeI CTNAG 5 cut(s) 336, 456, 874, 909, 1228
DpnI GATC 4 cut(s) 531, 645, 1114, 1176
DpnII GATC 4 cut(s) 529, 643, 1112, 1174
DraI TTTAAA 1 cut(s) 184
EaeI YGGCCR 1 cut(s) 448
Eco130I CCWWGG 3 cut(s) 707, 962, 989
Eco24I GRGCYC 1 cut(s) 1053
Eco31I GGTCTC 1 cut(s) 524
Eco47I GGWCC 2 cut(s) 45, 494
Eco88I CYCGRG 1 cut(s) 1256
Eco91I GGTNACC 1 cut(s) 614
EcoO65I GGTNACC 1 cut(s) 614
EcoRII CCWGG 4 cut(s) 93, 193, 283, 1052
EcoT14I CCWWGG 3 cut(s) 707, 962, 989
EcoT22I ATGCAT 1 cut(s) 984
EcoT38I GRGCYC 1 cut(s) 1053
ErhI CCWWGG 3 cut(s) 707, 962, 989
FalI AAGNNNNNCTT 4 cut(s) 682, 714, 1309, 1341
FaqI GGGAC 3 cut(s) 173, 488, 785
FauNDI CATATG 1 cut(s) 892
FbaI TGATCA 1 cut(s) 643
Fnu4HI GCNGC 2 cut(s) 60, 461
FokI GGATG 5 cut(s) 22, 290, 644, 844, 1220
FriOI GRGCYC 1 cut(s) 1053
Fsp4HI GCNGC 2 cut(s) 60, 461
FspBI CTAG 1 cut(s) 123
GluI GCNGC 2 cut(s) 60, 461
GsuI CTGGAG 2 cut(s) 177, 328
HaeIII GGCC 4 cut(s) 450, 746, 1268, 1280
Hin1I GRCGYC 1 cut(s) 501
HinfI GANTC 6 cut(s) 444, 548, 678, 727, 1373, 1415
HphI GGTGA 4 cut(s) 280, 380, 626, 770
Hpy188I TCNGA 3 cut(s) 540, 659, 1117
HpyAV CCTTC 5 cut(s) 241, 325, 584, 1016, 1217
HpyCH4III ACNGT 6 cut(s) 173, 239, 274, 298, 1065, 1343
HpyCH4IV ACGT 1 cut(s) 501
HpyCH4V TGCA 6 cut(s) 206, 314, 722, 982, 1136, 1161
HpyF10VI GCNNNNNNNGC 3 cut(s) 123, 784, 1367
HpyF3I CTNAG 5 cut(s) 336, 456, 874, 909, 1228
HpySE526I ACGT 1 cut(s) 501
Hsp92I GRCGYC 1 cut(s) 501
Ksp22I TGATCA 1 cut(s) 643
Kzo9I GATC 4 cut(s) 529, 643, 1112, 1174
LmnI GCTCC 2 cut(s) 832, 1189
Lsp1109I GCAGC 1 cut(s) 71
LweI GCATC 2 cut(s) 796, 821
MabI ACCWGGT 1 cut(s) 283
MaeI CTAG 1 cut(s) 123
MaeII ACGT 1 cut(s) 501
MaeIII GTNAC 4 cut(s) 268, 380, 475, 614
MalI GATC 4 cut(s) 531, 645, 1114, 1176
MbiI CCGCTC 1 cut(s) 460
MboI GATC 4 cut(s) 529, 643, 1112, 1174
MboII GAAGA 3 cut(s) 16, 687, 1394
MflI RGATCY 1 cut(s) 529
MhlI GDGCHC 1 cut(s) 1053
MluCI AATT 6 cut(s) 141, 367, 735, 753, 969, 1156
MmeI TCCRAC 1 cut(s) 421
Mph1103I ATGCAT 1 cut(s) 984
MseI TTAA 6 cut(s) 183, 348, 774, 945, 968, 977
MslI CAYNNNNRTG 5 cut(s) 651, 1037, 1098, 1104, 1166
MspR9I CCNGG 4 cut(s) 95, 195, 285, 1054
Mva1269I GAATGC 2 cut(s) 982, 1161
MvaI CCWGG 4 cut(s) 95, 195, 285, 1054
MwoI GCNNNNNNNGC 3 cut(s) 123, 784, 1367
NcoI CCATGG 2 cut(s) 962, 989
NdeI CATATG 1 cut(s) 892
NdeII GATC 4 cut(s) 529, 643, 1112, 1174
NlaIV GGNNCC 3 cut(s) 289, 747, 1340
NmeAIII GCCGAG 1 cut(s) 1244
NmuCI GTSAC 2 cut(s) 268, 614
NsiI ATGCAT 1 cut(s) 984
PagI TCATGA 2 cut(s) 646, 730
PctI GAATGC 2 cut(s) 982, 1161
PfeI GAWTC 6 cut(s) 444, 548, 678, 727, 1373, 1415
PkrI GCNGC 2 cut(s) 61, 462
Psp6I CCWGG 4 cut(s) 93, 193, 283, 1052
PspEI GGTNACC 1 cut(s) 614
PspGI CCWGG 4 cut(s) 93, 193, 283, 1052
PspN4I GGNNCC 3 cut(s) 289, 747, 1340
PspPI GGNCC 3 cut(s) 45, 494, 745
PstI CTGCAG 1 cut(s) 724
PsuI RGATCY 1 cut(s) 529
RsaI GTAC 7 cut(s) 295, 823, 839, 914, 1062, 1067, 1262
RsaNI GTAC 7 cut(s) 294, 822, 838, 913, 1061, 1066, 1261
RseI CAYNNNNRTG 5 cut(s) 651, 1037, 1098, 1104, 1166
SaqAI TTAA 6 cut(s) 183, 348, 774, 945, 968, 977
SatI GCNGC 2 cut(s) 60, 461
Sau3AI GATC 4 cut(s) 529, 643, 1112, 1174
Sau96I GGNCC 3 cut(s) 45, 494, 745
ScaI AGTACT 3 cut(s) 295, 823, 1262
ScrFI CCNGG 4 cut(s) 95, 195, 285, 1054
SduI GDGCHC 1 cut(s) 1053
SexAI ACCWGGT 1 cut(s) 283
SfaNI GCATC 2 cut(s) 796, 821
SfcI CTRYAG 2 cut(s) 720, 1362
SinI GGWCC 2 cut(s) 45, 494
SmiMI CAYNNNNRTG 5 cut(s) 651, 1037, 1098, 1104, 1166
SmlI CTYRAG 1 cut(s) 923
SmoI CTYRAG 1 cut(s) 923
Sse9I AATT 6 cut(s) 141, 367, 735, 753, 969, 1156
SsiI CCGC 3 cut(s) 460, 629, 888
SspI AATATT 1 cut(s) 428
SspMI CTAG 1 cut(s) 123
StyD4I CCNGG 4 cut(s) 93, 193, 283, 1052
StyI CCWWGG 3 cut(s) 707, 962, 989
TaaI ACNGT 6 cut(s) 173, 239, 274, 298, 1065, 1343
TaiI ACGT 1 cut(s) 504
TaqI TCGA 2 cut(s) 1074, 1273
TasI AATT 6 cut(s) 141, 367, 735, 753, 969, 1156
TatI WGTACW 5 cut(s) 293, 821, 1060, 1065, 1260
TauI GCSGC 1 cut(s) 463
TfiI GAWTC 6 cut(s) 444, 548, 678, 727, 1373, 1415
Tru1I TTAA 6 cut(s) 183, 348, 774, 945, 968, 977
Tru9I TTAA 6 cut(s) 183, 348, 774, 945, 968, 977
TscAI CASTG 2 cut(s) 178, 460
TseFI GTSAC 2 cut(s) 268, 614
TseI GCWGC 1 cut(s) 59
Tsp45I GTSAC 2 cut(s) 268, 614
TspDTI ATGAA 8 cut(s) 17, 209, 294, 344, 747, 846, 870, 1122
TspRI CASTG 2 cut(s) 178, 460
VpaK11BI GGWCC 2 cut(s) 45, 494
XcmI CCANNNNNNNNNTGG 1 cut(s) 1328
XspI CTAG 1 cut(s) 123
ZraI GACGTC 1 cut(s) 502
ZrmI AGTACT 3 cut(s) 295, 823, 1262
Zsp2I ATGCAT 1 cut(s) 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.