MD05G1059300.v1.1

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
10350920 .. 10354674
3755 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1059300.v1.1.491

Sequence Viewer

Length: 1413 bp
ATGGGTGTGCTGGATTTAGCTTCTTCAAGGGCAGCAGCAGCCGCTGTTGTAGTGCTGGGTTTGGTCTTGAGCTTTGGAGTGGTGTGCAATGGAGGCAAAACAAGTAGTTTTGTGAGGAAAGTTGAGAAGACTATGGACATGCCTCTTGACAGTGATGTCTTCAAAGTCCCTCCTGGCTATAATGCACCGCAACAAGTTCATATAACACAAGGAGACCAACTGGGAAAGGCAGTGATCGTTTCATGGGTTACTGTGGATGAACCCGGTTCCAGTAGTGTGCTTTACTGGAGTGCAAACAGCAAGAAAAACAAGGCCGAGGGCAAAATTACAACCTATAAATTCTACAATTACACTTCCGGTTACATTCACCACACCACTGTCAGAAATTTAATGTTCAATACCAAATACTACTATGTGATTGGAATTGGCCATACCGAGCGGCAGTTCTGGTTTATAACTCCTCCTGAAGTTGGTCCGGACACCTCTTACACATTTGGACTCATAGGGGATCTGGGACAGAGCTATGATTCAAATAAGACGCTTACTCATTACGAGTTAAACCCGCAGAAAGGACAAGCAGTATTGTTTGTTGGGGACCTCTCTTATGCAGATAACTACCCAAATCATGACAATGTCAGGTGGGATACTTGGGGAAGATTCGTCGAGAGAAGTGTTGCTTATCAACCTTGGATATGGACTGCAGGAAACCATGAAATCGATTTTGCCCCAGAAATCGGTGAAACCAAACCTTTTAAGCCTTACAGTCACCGGTATCATGTCCCCTATAAAGCATCTGGGAGTACTTCCCCCTTTTGGTATTCGATCAAGAGAGCTTCGGCATACATCATAGTCTTGTCTTCTTATTCGGCATATGGTAAATACACCCCTCAGTACAAATGGCTCGAGGAGGAACTACCGAAGGTTAATAGGAGTGAAACACCATGGTTGATTGTTTTAATGCATTCTCCATGGTACAACAGCTACAACTATCACTATATGGAAGGAGAAACCATGAGAGTGATGTATGAGCCATGGTTTGTGAAGTACAAAGTCGACGTGGTATTTGCTGGTCATGTCCATGCATATGAACGATCTGAACGTGTATCCAATGTTGCATACAACATCGTAAATGGCATTTGCAAACCTGTGAAAGATCAATATGCACCAGTGTACATTACGATTGGTGATGGAGGAAATCTTGAAGGCTTAGCGACAAATATGACAGAACCACAGCCAGATTACTCAGCTTATAGAGAGGCCAGTTTTGGTCATGCTACTTTAGACATCAAGAATCGAACCCATGCCTACTATAGTTGGCACCGTAATCAAGATGGATATGCAGTAAAAGCAGATTCTATGTGGTTTTTCAATAGATTCTATCACCCTGTAGATGATTCCACAACTGCTGAATAA

Protein Analysis

471

Amino Acids

53.7

Weight (kDa)

6.63

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 63 - 151 4.7e-17 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 164 - 362 1e-29 Calcineurin-like phosphoesterase
Metallophos_C PF14008 388 - 447 1e-20 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 455
AasI GACNNNNNNGTC 1 cut(s) 155
AccB1I GGYRCC 1 cut(s) 1317
AccBSI CCGCTC 1 cut(s) 439
AccI GTMKAC 1 cut(s) 1053
AccIII TCCGGA 1 cut(s) 475
AciI CCGC 4 cut(s) 42, 188, 439, 563
AclWI GGATC 1 cut(s) 516
AcoI YGGCCR 1 cut(s) 427
AcsI RAATTY 2 cut(s) 338, 385
AcuI CTGAAG 1 cut(s) 486
AfaI GTAC 5 cut(s) 802, 893, 974, 1046, 1172
AfiI CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
AflIII ACRYGT 1 cut(s) 1099
AgeI ACCGGT 1 cut(s) 768
AgsI TTSAA 6 cut(s) 27, 163, 397, 531, 1202, 1369
AjiI CACGTC 1 cut(s) 1057
AjnI CCWGG 1 cut(s) 172
AluBI AGCT 6 cut(s) 20, 72, 522, 833, 981, 1247
AluI AGCT 6 cut(s) 20, 72, 522, 833, 981, 1247
Alw26I GTCTC 1 cut(s) 207
AlwI GGATC 1 cut(s) 516
AlwNI CAGNNNCTG 1 cut(s) 44
Ama87I CYCGRG 1 cut(s) 902
Aor13HI TCCGGA 1 cut(s) 475
AoxI GGCC 3 cut(s) 312, 427, 1257
ApeKI GCWGC 3 cut(s) 32, 35, 38
ApoI RAATTY 2 cut(s) 338, 385
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
AsiGI ACCGGT 1 cut(s) 768
AspS9I GGNCC 2 cut(s) 473, 595
AsuC2I CCSGG 1 cut(s) 264
AsuHPI GGTGA 5 cut(s) 359, 749, 758, 1196, 1373
AvaI CYCGRG 1 cut(s) 902
AvaII GGWCC 2 cut(s) 473, 595
BalI TGGCCA 1 cut(s) 429
BanI GGYRCC 1 cut(s) 1317
BbsI GAAGAC 3 cut(s) 134, 151, 849
BbvI GCAGC 3 cut(s) 44, 47, 50
BccI CCATC 2 cut(s) 1181, 1325
BciT130I CCWGG 1 cut(s) 174
BciVI GTATCC 2 cut(s) 637, 1114
BcnI CCSGG 1 cut(s) 264
BcoDI GTCTC 1 cut(s) 207
BfmI CTRYAG 3 cut(s) 699, 1309, 1386
BfuI GTATCC 2 cut(s) 637, 1114
BisI GCNGC 5 cut(s) 33, 36, 39, 42, 440
BlpI GCTNAGC 1 cut(s) 1207
BlsI GCNGC 5 cut(s) 34, 37, 40, 43, 441
BmcAI AGTACT 1 cut(s) 802
Bme1390I CCNGG 2 cut(s) 174, 264
Bme18I GGWCC 2 cut(s) 473, 595
BmeT110I CYCGRG 1 cut(s) 902
BmgBI CACGTC 1 cut(s) 1057
BmgT120I GGNCC 2 cut(s) 473, 595
BmiI GGNNCC 3 cut(s) 268, 596, 1319
BmrFI CCNGG 2 cut(s) 174, 264
BmrI ACTGGG 1 cut(s) 230
BmsI GCATC 1 cut(s) 800
BmuI ACTGGG 1 cut(s) 230
BpiI GAAGAC 3 cut(s) 134, 151, 849
BpmI CTGGAG 1 cut(s) 307
Bpu1102I GCTNAGC 1 cut(s) 1207
BpuEI CTTGAG 1 cut(s) 88
BpuMI CCSGG 1 cut(s) 264
Bsa29I ATCGAT 1 cut(s) 717
BsaI GGTCTC 1 cut(s) 207
BsaJI CCNNGG 5 cut(s) 315, 686, 941, 968, 1031
BsaWI WCCGGW 3 cut(s) 356, 475, 768
Bsc4I CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
Bse118I RCCGGY 1 cut(s) 768
Bse1I ACTGG 5 cut(s) 225, 270, 290, 1166, 1260
Bse3DI GCAATG 1 cut(s) 94
BseAI TCCGGA 1 cut(s) 475
BseBI CCWGG 1 cut(s) 174
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 5 cut(s) 315, 686, 941, 968, 1031
BseGI GGATG 1 cut(s) 262
BseLI CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
BseMI GCAATG 1 cut(s) 94
BseMII CTCAG 2 cut(s) 902, 1257
BseNI ACTGG 5 cut(s) 225, 270, 290, 1166, 1260
BseRI GAGGAG 2 cut(s) 450, 920
BseXI GCAGC 3 cut(s) 44, 47, 50
BseYI CCCAGC 1 cut(s) 55
BshFI GGCC 3 cut(s) 314, 429, 1259
BshNI GGYRCC 1 cut(s) 1317
BshTI ACCGGT 1 cut(s) 768
BshVI ATCGAT 1 cut(s) 717
BsiHKCI CYCGRG 1 cut(s) 902
BsiSI CCGG 4 cut(s) 264, 357, 476, 769
BslFI GGGAC 4 cut(s) 152, 528, 608, 764
BslI CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
BsmAI GTCTC 1 cut(s) 207
BsmFI GGGAC 4 cut(s) 152, 528, 608, 764
BsmI GAATGC 1 cut(s) 961
BsnI GGCC 3 cut(s) 314, 429, 1259
Bso31I GGTCTC 1 cut(s) 207
BsoBI CYCGRG 1 cut(s) 902
Bsp13I TCCGGA 1 cut(s) 475
Bsp1407I TGTACA 1 cut(s) 1170
Bsp143I GATC 5 cut(s) 234, 508, 822, 1091, 1153
Bsp1720I GCTNAGC 1 cut(s) 1207
Bsp19I CCATGG 3 cut(s) 941, 968, 1031
BspACI CCGC 4 cut(s) 42, 188, 439, 563
BspANI GGCC 3 cut(s) 314, 429, 1259
BspCNI CTCAG 2 cut(s) 901, 1256
BspDI ATCGAT 1 cut(s) 717
BspEI TCCGGA 1 cut(s) 475
BspHI TCATGA 1 cut(s) 625
BspLI GGNNCC 3 cut(s) 268, 596, 1319
BspMAI CTGCAG 1 cut(s) 703
BspPI GGATC 1 cut(s) 516
BspT107I GGYRCC 1 cut(s) 1317
BspTNI GGTCTC 1 cut(s) 207
BsrBI CCGCTC 1 cut(s) 439
BsrDI GCAATG 1 cut(s) 94
BsrFI RCCGGY 1 cut(s) 768
BsrGI TGTACA 1 cut(s) 1170
BsrI ACTGG 5 cut(s) 225, 270, 290, 1166, 1260
BssAI RCCGGY 1 cut(s) 768
BssECI CCNNGG 5 cut(s) 315, 686, 941, 968, 1031
BssMI GATC 5 cut(s) 234, 508, 822, 1091, 1153
BssT1I CCWWGG 4 cut(s) 686, 941, 968, 1031
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 5 cut(s) 152, 253, 379, 764, 1322
BstAUI TGTACA 1 cut(s) 1170
BstDEI CTNAG 3 cut(s) 888, 1207, 1243
BstDSI CCRYGG 3 cut(s) 941, 968, 1031
BstF5I GGATG 1 cut(s) 262
BstKTI GATC 5 cut(s) 237, 511, 825, 1094, 1156
BstMAI GTCTC 1 cut(s) 207
BstMBI GATC 5 cut(s) 234, 508, 822, 1091, 1153
BstMWI GCNNNNNNNGC 4 cut(s) 38, 41, 93, 1346
BstNI CCWGG 1 cut(s) 174
BstNSI RCATGY 1 cut(s) 142
BstSCI CCNGG 2 cut(s) 172, 262
BstSFI CTRYAG 3 cut(s) 699, 1309, 1386
BstV1I GCAGC 3 cut(s) 44, 47, 50
BstV2I GAAGAC 3 cut(s) 134, 151, 849
BstX2I RGATCY 1 cut(s) 508
BstYI RGATCY 1 cut(s) 508
Bsu15I ATCGAT 1 cut(s) 717
BsuI GTATCC 2 cut(s) 637, 1114
BsuRI GGCC 3 cut(s) 314, 429, 1259
BsuTUI ATCGAT 1 cut(s) 717
BtgI CCRYGG 3 cut(s) 941, 968, 1031
BtrI CACGTC 1 cut(s) 1057
BtsCI GGATG 1 cut(s) 262
BtsI GCAGTG 1 cut(s) 237
BtsIMutI CAGTG 4 cut(s) 157, 237, 375, 1173
CaiI CAGNNNCTG 1 cut(s) 44
CciI TCATGA 1 cut(s) 625
Cfr10I RCCGGY 1 cut(s) 768
Cfr13I GGNCC 2 cut(s) 473, 595
ClaI ATCGAT 1 cut(s) 717
CseI GACGC 1 cut(s) 547
Csp6I GTAC 5 cut(s) 801, 892, 973, 1045, 1171
CspAI ACCGGT 1 cut(s) 768
CviQI GTAC 5 cut(s) 801, 892, 973, 1045, 1171
DdeI CTNAG 3 cut(s) 888, 1207, 1243
DpnI GATC 5 cut(s) 236, 510, 824, 1093, 1155
DpnII GATC 5 cut(s) 234, 508, 822, 1091, 1153
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 1 cut(s) 427
Eco130I CCWWGG 4 cut(s) 686, 941, 968, 1031
Eco31I GGTCTC 1 cut(s) 207
Eco47I GGWCC 2 cut(s) 473, 595
Eco57I CTGAAG 1 cut(s) 486
Eco88I CYCGRG 1 cut(s) 902
EcoO109I RGGNCCY 1 cut(s) 595
EcoRII CCWGG 1 cut(s) 172
EcoT14I CCWWGG 4 cut(s) 686, 941, 968, 1031
EcoT22I ATGCAT 2 cut(s) 963, 1084
ErhI CCWWGG 4 cut(s) 686, 941, 968, 1031
FalI AAGNNNNNCTT 2 cut(s) 661, 693
FaqI GGGAC 4 cut(s) 152, 528, 608, 764
FauI CCCGC 1 cut(s) 570
FauNDI CATATG 2 cut(s) 871, 1084
FblI GTMKAC 1 cut(s) 1053
Fnu4HI GCNGC 5 cut(s) 33, 36, 39, 42, 440
FokI GGATG 1 cut(s) 269
Fsp4HI GCNGC 5 cut(s) 33, 36, 39, 42, 440
GluI GCNGC 5 cut(s) 33, 36, 39, 42, 440
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 1 cut(s) 307
HaeIII GGCC 3 cut(s) 314, 429, 1259
HapII CCGG 4 cut(s) 264, 357, 476, 769
HgaI GACGC 1 cut(s) 547
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HinfI GANTC 7 cut(s) 498, 527, 657, 1291, 1352, 1374, 1394
HpaII CCGG 4 cut(s) 264, 357, 476, 769
HphI GGTGA 5 cut(s) 359, 749, 758, 1196, 1373
Hpy166II GTNNAC 2 cut(s) 1054, 1171
Hpy188I TCNGA 2 cut(s) 383, 1096
Hpy8I GTNNAC 2 cut(s) 1054, 1171
Hpy99I CGWCG 2 cut(s) 665, 1058
HpyAV CCTTC 3 cut(s) 913, 995, 1196
HpyCH4III ACNGT 5 cut(s) 152, 253, 379, 764, 1322
HpyCH4IV ACGT 2 cut(s) 1056, 1099
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 41, 93, 1346
HpyF3I CTNAG 3 cut(s) 888, 1207, 1243
HpySE526I ACGT 2 cut(s) 1056, 1099
Kpn2I TCCGGA 1 cut(s) 475
Kzo9I GATC 5 cut(s) 234, 508, 822, 1091, 1153
Lsp1109I GCAGC 3 cut(s) 44, 47, 50
LweI GCATC 1 cut(s) 800
MaeII ACGT 2 cut(s) 1056, 1099
MaeIII GTNAC 3 cut(s) 247, 359, 764
MalI GATC 5 cut(s) 236, 510, 824, 1093, 1155
MbiI CCGCTC 1 cut(s) 439
MboI GATC 5 cut(s) 234, 508, 822, 1091, 1153
MboII GAAGA 5 cut(s) 15, 139, 151, 666, 849
MflI RGATCY 1 cut(s) 508
MlsI TGGCCA 1 cut(s) 429
MluCI AATT 5 cut(s) 324, 338, 346, 385, 423
MluNI TGGCCA 1 cut(s) 429
MlyI GAGTC 1 cut(s) 492
Mox20I TGGCCA 1 cut(s) 429
Mph1103I ATGCAT 2 cut(s) 963, 1084
MroI TCCGGA 1 cut(s) 475
MscI TGGCCA 1 cut(s) 429
MseI TTAA 5 cut(s) 389, 557, 753, 924, 956
MslI CAYNNNNRTG 4 cut(s) 630, 1016, 1077, 1083
Msp20I TGGCCA 1 cut(s) 429
MspA1I CMGCKG 1 cut(s) 44
MspI CCGG 4 cut(s) 264, 357, 476, 769
MspR9I CCNGG 2 cut(s) 174, 264
Mva1269I GAATGC 1 cut(s) 961
MvaI CCWGG 1 cut(s) 174
MwoI GCNNNNNNNGC 4 cut(s) 38, 41, 93, 1346
NciI CCSGG 1 cut(s) 264
NcoI CCATGG 3 cut(s) 941, 968, 1031
NdeI CATATG 2 cut(s) 871, 1084
NdeII GATC 5 cut(s) 234, 508, 822, 1091, 1153
NlaIV GGNNCC 3 cut(s) 268, 596, 1319
NmeAIII GCCGAG 1 cut(s) 340
NmuCI GTSAC 1 cut(s) 764
NsiI ATGCAT 2 cut(s) 963, 1084
NspI RCATGY 1 cut(s) 142
PaeR7I CTCGAG 1 cut(s) 902
PagI TCATGA 1 cut(s) 625
PcsI WCGNNNNNNNCGW 1 cut(s) 1096
PctI GAATGC 1 cut(s) 961
PfeI GAWTC 6 cut(s) 527, 657, 1291, 1352, 1374, 1394
PflFI GACNNNGTC 1 cut(s) 632
PinAI ACCGGT 1 cut(s) 768
PkrI GCNGC 5 cut(s) 34, 37, 40, 43, 441
PleI GAGTC 1 cut(s) 492
PpsI GAGTC 1 cut(s) 492
PpuMI RGGWCCY 1 cut(s) 595
PsiI TTATAA 1 cut(s) 455
Psp5II RGGWCCY 1 cut(s) 595
Psp6I CCWGG 1 cut(s) 172
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 3 cut(s) 268, 596, 1319
PspPI GGNCC 2 cut(s) 473, 595
PspPPI RGGWCCY 1 cut(s) 595
PspXI VCTCGAGB 1 cut(s) 902
PstI CTGCAG 1 cut(s) 703
PstNI CAGNNNCTG 1 cut(s) 44
PsuI RGATCY 1 cut(s) 508
PsyI GACNNNGTC 1 cut(s) 632
RsaI GTAC 5 cut(s) 802, 893, 974, 1046, 1172
RsaNI GTAC 5 cut(s) 801, 892, 973, 1045, 1171
RseI CAYNNNNRTG 4 cut(s) 630, 1016, 1077, 1083
SalI GTCGAC 1 cut(s) 1052
SaqAI TTAA 5 cut(s) 389, 557, 753, 924, 956
SatI GCNGC 5 cut(s) 33, 36, 39, 42, 440
Sau3AI GATC 5 cut(s) 234, 508, 822, 1091, 1153
Sau96I GGNCC 2 cut(s) 473, 595
ScaI AGTACT 1 cut(s) 802
SchI GAGTC 1 cut(s) 492
ScrFI CCNGG 2 cut(s) 174, 264
SfaNI GCATC 1 cut(s) 800
SfcI CTRYAG 3 cut(s) 699, 1309, 1386
Sfr274I CTCGAG 1 cut(s) 902
SinI GGWCC 2 cut(s) 473, 595
SlaI CTCGAG 1 cut(s) 902
SmiMI CAYNNNNRTG 4 cut(s) 630, 1016, 1077, 1083
SmlI CTYRAG 2 cut(s) 67, 902
SmoI CTYRAG 2 cut(s) 67, 902
Sse9I AATT 5 cut(s) 324, 338, 346, 385, 423
SsiI CCGC 4 cut(s) 42, 188, 439, 563
StyD4I CCNGG 2 cut(s) 172, 262
StyI CCWWGG 4 cut(s) 686, 941, 968, 1031
TaaI ACNGT 5 cut(s) 152, 253, 379, 764, 1322
TaiI ACGT 2 cut(s) 1059, 1102
TaqI TCGA 6 cut(s) 663, 717, 821, 903, 1053, 1294
TasI AATT 5 cut(s) 324, 338, 346, 385, 423
TatI WGTACW 4 cut(s) 800, 891, 1044, 1170
TauI GCSGC 2 cut(s) 44, 442
TfiI GAWTC 6 cut(s) 527, 657, 1291, 1352, 1374, 1394
Tru1I TTAA 5 cut(s) 389, 557, 753, 924, 956
Tru9I TTAA 5 cut(s) 389, 557, 753, 924, 956
TscAI CASTG 4 cut(s) 157, 237, 382, 1173
TseFI GTSAC 1 cut(s) 764
TseI GCWGC 3 cut(s) 32, 35, 38
Tsp45I GTSAC 1 cut(s) 764
TspDTI ATGAA 5 cut(s) 188, 231, 273, 726, 1101
TspRI CASTG 4 cut(s) 157, 237, 382, 1173
Tth111I GACNNNGTC 1 cut(s) 632
VpaK11BI GGWCC 2 cut(s) 473, 595
XapI RAATTY 2 cut(s) 338, 385
XceI RCATGY 1 cut(s) 142
XhoI CTCGAG 1 cut(s) 902
XmiI GTMKAC 1 cut(s) 1053
ZrmI AGTACT 1 cut(s) 802
Zsp2I ATGCAT 2 cut(s) 963, 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.