Prupe.8G089000_v2.0.a1

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
12247850 .. 12252445
4596 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G089000.1

Sequence Viewer

Length: 1440 bp
ATGGCCAAGATGGGTTTGGTGAGCTTAGCTTCTGCATCTACTTCTTCCAGGGTAGCAGCAGCCATTGTTGTAGTGTTGGGTTTGGTTTTGAGCTTGGCAGTGGTGTGTAATGGAGGCAAGACAAGTAGTTTTGTGAGGAAAGTGGAGAAATCTGGGGTCATGCCTCTTGACAGTGATGTCTTTAAAGTCCCTCCTGGCTATAACGCACCTCAACAAGTACATATAACACAAGGAGACCAGCTGGGAAAAGCAGTGATTGTGTCATGGGTCACGGTGGACGAACCAGGTTCCAATACAGTGGTTTATTGGAGCGCAAAGGGCGTGAAAGAGATGGCTGAGGGCGAAGTTACAACCTATAAATTCTACAATTACACTTCTGGTTACATTCACCACACCATCATCAGCAATTTAAATTTCGATACCAAATACCACTATGAAGTTGGAATTGACCACACTAAGCGGCAGTTCTGGTTTATTACTCCTCCTGAAGTTGGGCCGGACGTCCCTTATACATTTGGTCTCATAGGTGATCTGGGTCAGACCTATGATTCGAATGCGACGCTTACTCATTATGAATTGAACCCACAGAAAGGACAAGCAGTATTGTATGTTGGGGACCTCTCGTATGCAGATCTCTTCCCAAATCATGATAATGTCAGGTGGGATACATGGGGAAGATTCACCGAGAGAAGTGTTGCTTATCAACCTTGGATATGGACTGCAGGGAATCATGATATTGATTTTGCCCCAGAAATTGGTGAACCCGAACCTTTTAAGCCTTACACTCACCGGTATCCTGTCCCACAGAATGCATCAGGGAGTACCTCCCCACTTTGGTACTCAATCAAAAGAGCTTCAGCATACATCATAGTCTTATCTTCTTATTCAGCATATGGTAAATACACTCCTCAGAACATATGGATTGAGGAGGAGCTACCAAAGGTTAACAGAAGTGAGACATCATGGTTGATTGTTTTAATGCATTCACCATGGTATAATAGCTACACCAATCACTATATGGAAGGAGAAACCATGAGAGTGATGTATGAGTCATTGTTTGTGAAGTACAAGGTTGACGTGGTTTTTAACGGTCATGTCCATGCCTATGAACGATCTCATCGTATATCCAATGTCGCATACAACATCGTAAACGGTAATTGCATTCCCGTGAAAGATCAATCCGCACCGGTCTACCTTACCATTGGTGATGGAGGAAATAGTGAGGGCTTAGCAACCAATATGACAGAACCACAGCCAGATTACTCATCTGTTAGAGAGGCCAGTTTTGGCCATGCTACTTTCGGCATCAAGAACCGAACCCATGCTTACTTTGGTTGGCACCGGAATCAAGATGGATATCCAGTAACTGCTGATTCTATGTGGTTTTTAAACAGATATTATAATCCTGATACTGAGTTTGCAAGTGCCCAACACTACTAG

Protein Analysis

480

Amino Acids

54.01

Weight (kDa)

5.97

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1401
AasI GACNNNNNNGTC 1 cut(s) 176
AatII GACGTC 1 cut(s) 504
AccB1I GGYRCC 1 cut(s) 1338
AccB7I CCANNNNNTGG 1 cut(s) 755
AccI GTMKAC 1 cut(s) 1191
AciI CCGC 2 cut(s) 460, 1182
AcoI YGGCCR 2 cut(s) 3, 1288
AcsI RAATTY 2 cut(s) 359, 412
AcuI CTGAAG 2 cut(s) 507, 840
AcyI GRCGYC 1 cut(s) 501
AfaI GTAC 4 cut(s) 219, 823, 839, 1067
AfiI CCNNNNNNNGG 4 cut(s) 491, 590, 755, 834
AgeI ACCGGT 2 cut(s) 789, 1186
AgsI TTSAA 1 cut(s) 580
AjiI CACGTC 1 cut(s) 1078
AjnI CCWGG 3 cut(s) 47, 193, 283
AluBI AGCT 7 cut(s) 24, 29, 93, 241, 854, 934, 1002
AluI AGCT 7 cut(s) 24, 29, 93, 241, 854, 934, 1002
Alw26I GTCTC 3 cut(s) 228, 524, 950
AlwNI CAGNNNCTG 1 cut(s) 1367
AoxI GGCC 4 cut(s) 3, 494, 1278, 1288
ApeKI GCWGC 2 cut(s) 56, 59
ApoI RAATTY 2 cut(s) 359, 412
ArsI GACNNNNNNTTYG 2 cut(s) 532, 564
AsiGI ACCGGT 2 cut(s) 789, 1186
AspLEI GCGC 1 cut(s) 314
AspS9I GGNCC 2 cut(s) 494, 616
AsuHPI GGTGA 8 cut(s) 31, 380, 539, 673, 770, 779, 978, 1217
AsuII TTCGAA 1 cut(s) 551
AvaII GGWCC 1 cut(s) 616
BaeGI GKGCMC 1 cut(s) 1429
BalI TGGCCA 2 cut(s) 5, 1290
BanI GGYRCC 1 cut(s) 1338
BbvCI CCTCAGC 1 cut(s) 336
BbvI GCAGC 2 cut(s) 68, 71
BccI CCATC 5 cut(s) 4, 325, 404, 1202, 1346
BciT130I CCWGG 3 cut(s) 49, 195, 285
BciVI GTATCC 2 cut(s) 658, 804
BcoDI GTCTC 3 cut(s) 228, 524, 950
BfaI CTAG 1 cut(s) 1438
BfmI CTRYAG 1 cut(s) 720
BfuI GTATCC 2 cut(s) 658, 804
BglII AGATCT 1 cut(s) 631
BisI GCNGC 3 cut(s) 57, 60, 461
BlpI GCTNAGC 2 cut(s) 25, 1228
BlsI GCNGC 3 cut(s) 58, 61, 462
Bme1390I CCNGG 3 cut(s) 49, 195, 285
Bme18I GGWCC 1 cut(s) 616
BmgBI CACGTC 1 cut(s) 1078
BmgT120I GGNCC 2 cut(s) 494, 616
BmiI GGNNCC 3 cut(s) 289, 617, 1340
BmrFI CCNGG 3 cut(s) 49, 195, 285
BmsI GCATC 3 cut(s) 44, 821, 1314
Bpu10I CCTNAGC 1 cut(s) 336
Bpu1102I GCTNAGC 2 cut(s) 25, 1228
Bpu14I TTCGAA 1 cut(s) 551
BsaBI GATNNNNATC 1 cut(s) 1356
BsaHI GRCGYC 1 cut(s) 501
BsaI GGTCTC 2 cut(s) 228, 524
BsaJI CCNNGG 3 cut(s) 48, 707, 989
BsaWI WCCGGW 3 cut(s) 789, 1186, 1341
Bsc4I CCNNNNNNNGG 4 cut(s) 491, 590, 755, 834
Bse118I RCCGGY 2 cut(s) 789, 1186
Bse1I ACTGG 2 cut(s) 1281, 1361
Bse8I GATNNNNATC 1 cut(s) 1356
BseBI CCWGG 3 cut(s) 49, 195, 285
BseDI CCNNGG 3 cut(s) 48, 707, 989
BseJI GATNNNNATC 1 cut(s) 1356
BseLI CCNNNNNNNGG 4 cut(s) 491, 590, 755, 834
BseMII CTCAG 3 cut(s) 327, 923, 1404
BseNI ACTGG 2 cut(s) 1281, 1361
BseRI GAGGAG 4 cut(s) 471, 897, 941, 944
BseSI GKGCMC 1 cut(s) 1429
BseXI GCAGC 2 cut(s) 68, 71
BseYI CCCAGC 1 cut(s) 241
BshFI GGCC 4 cut(s) 5, 496, 1280, 1290
BshNI GGYRCC 1 cut(s) 1338
BshTI ACCGGT 2 cut(s) 789, 1186
BsiSI CCGG 4 cut(s) 497, 790, 1187, 1342
BslFI GGGAC 4 cut(s) 173, 488, 629, 785
BslI CCNNNNNNNGG 4 cut(s) 491, 590, 755, 834
BsmAI GTCTC 3 cut(s) 228, 524, 950
BsmFI GGGAC 4 cut(s) 173, 488, 629, 785
BsmI GAATGC 4 cut(s) 559, 814, 982, 1161
BsnI GGCC 4 cut(s) 5, 496, 1280, 1290
Bso31I GGTCTC 2 cut(s) 228, 524
Bsp119I TTCGAA 1 cut(s) 551
Bsp1286I GDGCHC 1 cut(s) 1429
Bsp143I GATC 4 cut(s) 529, 631, 1112, 1174
Bsp1720I GCTNAGC 2 cut(s) 25, 1228
Bsp19I CCATGG 1 cut(s) 989
BspACI CCGC 2 cut(s) 460, 1182
BspANI GGCC 4 cut(s) 5, 496, 1280, 1290
BspCNI CTCAG 3 cut(s) 328, 922, 1405
BspHI TCATGA 2 cut(s) 646, 730
BspLI GGNNCC 3 cut(s) 289, 617, 1340
BspMAI CTGCAG 1 cut(s) 724
BspT104I TTCGAA 1 cut(s) 551
BspT107I GGYRCC 1 cut(s) 1338
BspTNI GGTCTC 2 cut(s) 228, 524
BsrFI RCCGGY 2 cut(s) 789, 1186
BsrI ACTGG 2 cut(s) 1281, 1361
BssAI RCCGGY 2 cut(s) 789, 1186
BssECI CCNNGG 3 cut(s) 48, 707, 989
BssMI GATC 4 cut(s) 529, 631, 1112, 1174
BssNI GRCGYC 1 cut(s) 501
BssT1I CCWWGG 2 cut(s) 707, 989
Bst2UI CCWGG 3 cut(s) 49, 195, 285
Bst4CI ACNGT 5 cut(s) 173, 274, 298, 1091, 1154
Bst6I CTCTTC 1 cut(s) 641
BstACI GRCGYC 1 cut(s) 501
BstBI TTCGAA 1 cut(s) 551
BstDEI CTNAG 6 cut(s) 25, 336, 456, 909, 1228, 1413
BstDSI CCRYGG 1 cut(s) 989
BstHHI GCGC 1 cut(s) 314
BstKTI GATC 4 cut(s) 532, 634, 1115, 1177
BstMAI GTCTC 3 cut(s) 228, 524, 950
BstMBI GATC 4 cut(s) 529, 631, 1112, 1174
BstMWI GCNNNNNNNGC 1 cut(s) 318
BstNI CCWGG 3 cut(s) 49, 195, 285
BstSCI CCNGG 3 cut(s) 47, 193, 283
BstSFI CTRYAG 1 cut(s) 720
BstSLI GKGCMC 1 cut(s) 1429
BstV1I GCAGC 2 cut(s) 68, 71
BstX2I RGATCY 1 cut(s) 631
BstXI CCANNNNNNTGG 1 cut(s) 298
BstYI RGATCY 1 cut(s) 631
BsuI GTATCC 2 cut(s) 658, 804
BsuRI GGCC 4 cut(s) 5, 496, 1280, 1290
BtgI CCRYGG 1 cut(s) 989
BtrI CACGTC 1 cut(s) 1078
BtsI GCAGTG 2 cut(s) 105, 258
BtsIMutI CAGTG 4 cut(s) 105, 178, 258, 303
CaiI CAGNNNCTG 1 cut(s) 1367
CciI TCATGA 2 cut(s) 646, 730
CfoI GCGC 1 cut(s) 314
Cfr10I RCCGGY 2 cut(s) 789, 1186
Cfr13I GGNCC 2 cut(s) 494, 616
CseI GACGC 1 cut(s) 568
CsiI ACCWGGT 1 cut(s) 283
Csp6I GTAC 4 cut(s) 218, 822, 838, 1066
CspAI ACCGGT 2 cut(s) 789, 1186
CviQI GTAC 4 cut(s) 218, 822, 838, 1066
DdeI CTNAG 6 cut(s) 25, 336, 456, 909, 1228, 1413
DpnI GATC 4 cut(s) 531, 633, 1114, 1176
DpnII GATC 4 cut(s) 529, 631, 1112, 1174
DraI TTTAAA 3 cut(s) 184, 411, 1389
DrdI GACNNNNNNGTC 1 cut(s) 176
DseDI GACNNNNNNGTC 1 cut(s) 176
EaeI YGGCCR 2 cut(s) 3, 1288
Eam1104I CTCTTC 1 cut(s) 641
EarI CTCTTC 1 cut(s) 641
Eco130I CCWWGG 2 cut(s) 707, 989
Eco31I GGTCTC 2 cut(s) 228, 524
Eco32I GATATC 1 cut(s) 1358
Eco47I GGWCC 1 cut(s) 616
Eco57I CTGAAG 2 cut(s) 507, 840
EcoO109I RGGNCCY 1 cut(s) 616
EcoRII CCWGG 3 cut(s) 47, 193, 283
EcoRV GATATC 1 cut(s) 1358
EcoT14I CCWWGG 2 cut(s) 707, 989
EcoT22I ATGCAT 2 cut(s) 814, 984
ErhI CCWWGG 2 cut(s) 707, 989
FalI AAGNNNNNCTT 2 cut(s) 682, 714
FaqI GGGAC 4 cut(s) 173, 488, 629, 785
FauNDI CATATG 2 cut(s) 892, 917
FblI GTMKAC 1 cut(s) 1191
Fnu4HI GCNGC 3 cut(s) 57, 60, 461
Fsp4HI GCNGC 3 cut(s) 57, 60, 461
FspBI CTAG 1 cut(s) 1438
GlaI GCGC 1 cut(s) 313
GluI GCNGC 3 cut(s) 57, 60, 461
GsaI CCCAGC 1 cut(s) 245
HaeIII GGCC 4 cut(s) 5, 496, 1280, 1290
HapII CCGG 4 cut(s) 497, 790, 1187, 1342
HgaI GACGC 1 cut(s) 568
HhaI GCGC 1 cut(s) 314
Hin1I GRCGYC 1 cut(s) 501
Hin6I GCGC 1 cut(s) 312
HinP1I GCGC 1 cut(s) 312
HincII GTYRAC 2 cut(s) 946, 1075
HindII GTYRAC 2 cut(s) 946, 1075
HinfI GANTC 6 cut(s) 548, 678, 727, 1049, 1345, 1373
HpaI GTTAAC 1 cut(s) 946
HpaII CCGG 4 cut(s) 497, 790, 1187, 1342
HphI GGTGA 8 cut(s) 31, 380, 539, 673, 770, 779, 978, 1217
Hpy166II GTNNAC 6 cut(s) 277, 761, 946, 1075, 1150, 1192
Hpy188I TCNGA 2 cut(s) 540, 912
Hpy188III TCNNGA 7 cut(s) 167, 485, 647, 731, 1309, 1349, 1406
Hpy8I GTNNAC 6 cut(s) 277, 761, 946, 1075, 1150, 1192
Hpy99I CGWCG 1 cut(s) 562
HpyAV CCTTC 1 cut(s) 1016
HpyCH4III ACNGT 5 cut(s) 173, 274, 298, 1091, 1154
HpyCH4IV ACGT 2 cut(s) 501, 1077
HpyCH4V TGCA 7 cut(s) 35, 629, 722, 812, 982, 1161, 1421
HpyF10VI GCNNNNNNNGC 1 cut(s) 318
HpyF3I CTNAG 6 cut(s) 25, 336, 456, 909, 1228, 1413
HpySE526I ACGT 2 cut(s) 501, 1077
Hsp92I GRCGYC 1 cut(s) 501
HspAI GCGC 1 cut(s) 312
KspAI GTTAAC 1 cut(s) 946
Kzo9I GATC 4 cut(s) 529, 631, 1112, 1174
LmnI GCTCC 2 cut(s) 309, 931
Lsp1109I GCAGC 2 cut(s) 68, 71
LweI GCATC 3 cut(s) 44, 821, 1314
MabI ACCWGGT 1 cut(s) 283
MaeI CTAG 1 cut(s) 1438
MaeII ACGT 2 cut(s) 501, 1077
MaeIII GTNAC 4 cut(s) 268, 346, 380, 1363
MalI GATC 4 cut(s) 531, 633, 1114, 1176
MboI GATC 4 cut(s) 529, 631, 1112, 1174
MboII GAAGA 4 cut(s) 36, 628, 687, 870
MflI RGATCY 1 cut(s) 631
MhlI GDGCHC 1 cut(s) 1429
MlsI TGGCCA 2 cut(s) 5, 1290
MluCI AATT 8 cut(s) 359, 367, 406, 412, 444, 575, 753, 1156
MluNI TGGCCA 2 cut(s) 5, 1290
MlyI GAGTC 1 cut(s) 1058
MmeI TCCRAC 1 cut(s) 421
Mox20I TGGCCA 2 cut(s) 5, 1290
Mph1103I ATGCAT 2 cut(s) 814, 984
MscI TGGCCA 2 cut(s) 5, 1290
MseI TTAA 7 cut(s) 183, 410, 774, 945, 977, 1086, 1388
MslI CAYNNNNRTG 5 cut(s) 651, 1037, 1098, 1104, 1166
Msp20I TGGCCA 2 cut(s) 5, 1290
MspA1I CMGCKG 1 cut(s) 241
MspI CCGG 4 cut(s) 497, 790, 1187, 1342
MspR9I CCNGG 3 cut(s) 49, 195, 285
Mva1269I GAATGC 4 cut(s) 559, 814, 982, 1161
MvaI CCWGG 3 cut(s) 49, 195, 285
MwoI GCNNNNNNNGC 1 cut(s) 318
NcoI CCATGG 1 cut(s) 989
NdeI CATATG 2 cut(s) 892, 917
NdeII GATC 4 cut(s) 529, 631, 1112, 1174
NlaIV GGNNCC 3 cut(s) 289, 617, 1340
NmuCI GTSAC 1 cut(s) 268
NsiI ATGCAT 2 cut(s) 814, 984
NspV TTCGAA 1 cut(s) 551
PagI TCATGA 2 cut(s) 646, 730
PcsI WCGNNNNNNNCGW 1 cut(s) 1117
PctI GAATGC 4 cut(s) 559, 814, 982, 1161
PfeI GAWTC 5 cut(s) 548, 678, 727, 1345, 1373
PflMI CCANNNNNTGG 1 cut(s) 755
PinAI ACCGGT 2 cut(s) 789, 1186
PkrI GCNGC 3 cut(s) 58, 61, 462
PleI GAGTC 1 cut(s) 1057
PpsI GAGTC 1 cut(s) 1057
PpuMI RGGWCCY 1 cut(s) 616
PsiI TTATAA 1 cut(s) 1401
Psp5II RGGWCCY 1 cut(s) 616
Psp6I CCWGG 3 cut(s) 47, 193, 283
PspFI CCCAGC 1 cut(s) 241
PspGI CCWGG 3 cut(s) 47, 193, 283
PspN4I GGNNCC 3 cut(s) 289, 617, 1340
PspPI GGNCC 2 cut(s) 494, 616
PspPPI RGGWCCY 1 cut(s) 616
PstI CTGCAG 1 cut(s) 724
PstNI CAGNNNCTG 1 cut(s) 1367
PsuI RGATCY 1 cut(s) 631
PvuII CAGCTG 1 cut(s) 241
RsaI GTAC 4 cut(s) 219, 823, 839, 1067
RsaNI GTAC 4 cut(s) 218, 822, 838, 1066
RseI CAYNNNNRTG 5 cut(s) 651, 1037, 1098, 1104, 1166
SaqAI TTAA 7 cut(s) 183, 410, 774, 945, 977, 1086, 1388
SatI GCNGC 3 cut(s) 57, 60, 461
Sau3AI GATC 4 cut(s) 529, 631, 1112, 1174
Sau96I GGNCC 2 cut(s) 494, 616
SchI GAGTC 1 cut(s) 1058
ScrFI CCNGG 3 cut(s) 49, 195, 285
SduI GDGCHC 1 cut(s) 1429
SexAI ACCWGGT 1 cut(s) 283
SfaNI GCATC 3 cut(s) 44, 821, 1314
SfcI CTRYAG 1 cut(s) 720
SfuI TTCGAA 1 cut(s) 551
SinI GGWCC 1 cut(s) 616
SmiI ATTTAAAT 1 cut(s) 411
SmiMI CAYNNNNRTG 5 cut(s) 651, 1037, 1098, 1104, 1166
Sse9I AATT 8 cut(s) 359, 367, 406, 412, 444, 575, 753, 1156
SsiI CCGC 2 cut(s) 460, 1182
SspMI CTAG 1 cut(s) 1438
StyD4I CCNGG 3 cut(s) 47, 193, 283
StyI CCWWGG 2 cut(s) 707, 989
SwaI ATTTAAAT 1 cut(s) 411
TaaI ACNGT 5 cut(s) 173, 274, 298, 1091, 1154
TaiI ACGT 2 cut(s) 504, 1080
TaqI TCGA 2 cut(s) 417, 551
TasI AATT 8 cut(s) 359, 367, 406, 412, 444, 575, 753, 1156
TatI WGTACW 2 cut(s) 217, 1065
TauI GCSGC 1 cut(s) 463
TfiI GAWTC 5 cut(s) 548, 678, 727, 1345, 1373
Tru1I TTAA 7 cut(s) 183, 410, 774, 945, 977, 1086, 1388
Tru9I TTAA 7 cut(s) 183, 410, 774, 945, 977, 1086, 1388
TscAI CASTG 4 cut(s) 105, 178, 258, 303
TseFI GTSAC 1 cut(s) 268
TseI GCWGC 2 cut(s) 56, 59
Tsp45I GTSAC 1 cut(s) 268
TspDTI ATGAA 3 cut(s) 450, 588, 1122
TspRI CASTG 4 cut(s) 105, 178, 258, 303
Van91I CCANNNNNTGG 1 cut(s) 755
VpaK11BI GGWCC 1 cut(s) 616
XapI RAATTY 2 cut(s) 359, 412
XcmI CCANNNNNNNNNTGG 4 cut(s) 13, 437, 1015, 1328
XmiI GTMKAC 1 cut(s) 1191
XspI CTAG 1 cut(s) 1438
ZraI GACGTC 1 cut(s) 502
Zsp2I ATGCAT 2 cut(s) 814, 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.