MD05G1058900.v1.1

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
10313406 .. 10316003
2598 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1058900.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGTGGAAGATGGCGGTTCTTGTAGTATTTGGTCTGCTATTGAGCTTGGCAATGGTGTGTAATGGAGGTATTACAAGCACTTTTGTGAGGAAAACTGAGAGTACTGTCGATATGCCTTATGAAAGTGATGCCTTCCAAATTCCTCCAGGCCACAATGCACCTCAACAGGTTCATATAACACAAGGAGATCAAGAAGGGACGGCAATGATTGTGTCATGGATCACTCCGGATGAACCAGGTTCTAGCGTAGTGCTTTTTTGGAGCGATAAGCATAAGACAAAGAAGGCAGAGGGCAAAGCCAAACAATATAAATACCATGATTATACTTCTGGTTACATTCACCACTGCACCATCAGAAAATTAGAGCACAATACCAAATATTACTACAAGATTGGAATTGGCCAAGCTGAGAGGACATTTTGGTTTGTAACTCCTCCTGCAGTTGGGCCAGATGCCCCTTACACATTTGGTCTTCTTGGGGATTTAGGTCAAACCTTTGATTCAAACAAGACACTTGCTCATTACGAATCAAACCCATTGAAAGGCCAAACAGTTTTGTGTCTTGGTGACCTATCTTATGCTGATAACCATCCAAATCATGACCAAGTTAAGTGGGATACGTTTGGAAGGTTCATTGAGAGAAGTGCTGCTTATCAACCTTGGATTCATACTGCAGGAAATCATGAGATTGATTATGCACCAGAAATTGGTGAAACAAAACCTTTCAAGCCTTACAAGCACCGGTATACCACTCCGTTTAAAGCATCGGGGAGTACTGCTCCTTTCTGGTACTCAGTCAAGATAGCTTCAGCACACATCATAGTCTTGTCTTCATACTCATCATACGGTAAATACACTCCTCAGTATAAATGGCTGGAGCAGGAGCTACCAAAAGTTAACCGGGATGAGACACCATGGCTGATTGTTTTAGTGCATTCCCCATGGTACAATAGCTACAACTATCACTATATGGAAGGGGAAACCATGAGAGTCCAATTCGAGTCCTGGTTTGTTCAGCACAAGGTCGATGTGGTATTTGCTGGACATGTCCATGCCTACGAACGATCTGAGCGTGTATCAAATATTGCAAATAACCTCGAAAATGGTAAATGTTCCCCGGTGAAAGATCAATCTGCACCTGTCTACATTACAATTGGCGATGGAGGAAACATTGAAGGCTTAGCAACCAATATGAGAGACCCACAACCAGATTACTCAGCTTACAGAGAGGCCAGTTTTGGTCATGCCATTTTTGACATCAAGAACCGAACTCATGCCTACTATAGCTGGCACCGGAATGATGATGGAGCTGCAGTCAAAGCAGATTCTATGTGGTTTTTCAACAGATATCATCATCCTGTTGATGACTCCACAAGTTCCCAATCTTGA

Protein Analysis

463

Amino Acids

52.71

Weight (kDa)

6.46

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 54 - 144 5.9e-21 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 155 - 353 1.3e-25 Calcineurin-like phosphoesterase
Metallophos_C PF14008 379 - 437 5.5e-21 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1290
AccB7I CCANNNNNTGG 1 cut(s) 707
AccI GTMKAC 2 cut(s) 746, 1143
AccIII TCCGGA 1 cut(s) 226
AciI CCGC 1 cut(s) 14
AclWI GGATC 1 cut(s) 227
AcoI YGGCCR 1 cut(s) 400
AcsI RAATTY 1 cut(s) 138
AcuI CTGAAG 1 cut(s) 792
AfaI GTAC 4 cut(s) 103, 775, 791, 947
AfiI CCNNNNNNNGG 3 cut(s) 443, 542, 707
AflIII ACRYGT 1 cut(s) 1045
AgeI ACCGGT 1 cut(s) 741
AgsI TTSAA 5 cut(s) 504, 541, 727, 1175, 1342
AjnI CCWGG 3 cut(s) 145, 235, 1004
AleI CACNNNNGTG 1 cut(s) 83
AluBI AGCT 8 cut(s) 45, 407, 806, 886, 954, 1220, 1287, 1310
AluI AGCT 8 cut(s) 45, 407, 806, 886, 954, 1220, 1287, 1310
Alw21I GWGCWC 1 cut(s) 369
Alw26I GTCTC 2 cut(s) 902, 1191
AlwI GGATC 1 cut(s) 227
Aor13HI TCCGGA 1 cut(s) 226
AoxI GGCC 5 cut(s) 148, 400, 446, 544, 1230
ApeKI GCWGC 2 cut(s) 647, 1310
ApoI RAATTY 1 cut(s) 138
AsiGI ACCGGT 1 cut(s) 741
AspS9I GGNCC 1 cut(s) 446
AsuC2I CCSGG 2 cut(s) 902, 1118
AsuHPI GGTGA 4 cut(s) 332, 578, 722, 1132
BalI TGGCCA 1 cut(s) 402
BanI GGYRCC 1 cut(s) 1290
BbsI GAAGAC 2 cut(s) 464, 822
Bbv12I GWGCWC 1 cut(s) 369
BbvI GCAGC 2 cut(s) 634, 1297
BccI CCATC 5 cut(s) 4, 359, 597, 1154, 1298
BceAI ACGGC 1 cut(s) 216
BciT130I CCWGG 3 cut(s) 147, 237, 1006
BciVI GTATCC 1 cut(s) 610
BcnI CCSGG 2 cut(s) 902, 1118
BcoDI GTCTC 2 cut(s) 902, 1191
BfaI CTAG 1 cut(s) 243
BfmI CTRYAG 4 cut(s) 438, 672, 1282, 1311
BfuI GTATCC 1 cut(s) 610
BisI GCNGC 2 cut(s) 648, 1311
BlpI GCTNAGC 1 cut(s) 1180
BlsI GCNGC 2 cut(s) 649, 1312
BmcAI AGTACT 2 cut(s) 103, 775
Bme1390I CCNGG 5 cut(s) 147, 237, 902, 1006, 1118
BmgT120I GGNCC 1 cut(s) 446
BmiI GGNNCC 1 cut(s) 1292
BmrFI CCNGG 5 cut(s) 147, 237, 902, 1006, 1118
BmsI GCATC 3 cut(s) 118, 442, 773
BpiI GAAGAC 2 cut(s) 464, 822
BplI GAGNNNNNCTC 2 cut(s) 763, 795
BpmI CTGGAG 2 cut(s) 129, 896
Bpu1102I GCTNAGC 1 cut(s) 1180
BpuMI CCSGG 2 cut(s) 902, 1118
BsaBI GATNNNNATC 1 cut(s) 588
BsaI GGTCTC 1 cut(s) 1191
BsaJI CCNNGG 4 cut(s) 659, 914, 941, 1116
BsaWI WCCGGW 3 cut(s) 226, 741, 1293
BsaXI ACNNNNNCTCC 2 cut(s) 1299, 1329
Bsc4I CCNNNNNNNGG 3 cut(s) 443, 542, 707
Bse118I RCCGGY 1 cut(s) 741
Bse1I ACTGG 1 cut(s) 1233
Bse3DI GCAATG 2 cut(s) 57, 210
Bse8I GATNNNNATC 1 cut(s) 588
BseAI TCCGGA 1 cut(s) 226
BseBI CCWGG 3 cut(s) 147, 237, 1006
BseDI CCNNGG 4 cut(s) 659, 914, 941, 1116
BseGI GGATG 4 cut(s) 235, 589, 910, 1354
BseJI GATNNNNATC 1 cut(s) 588
BseLI CCNNNNNNNGG 3 cut(s) 443, 542, 707
BseMI GCAATG 2 cut(s) 57, 210
BseMII CTCAG 6 cut(s) 87, 399, 807, 875, 1059, 1230
BseNI ACTGG 1 cut(s) 1233
BseRI GAGGAG 2 cut(s) 423, 849
BseXI GCAGC 2 cut(s) 634, 1297
BsgI GTGCAG 2 cut(s) 331, 1119
BshFI GGCC 5 cut(s) 150, 402, 448, 546, 1232
BshNI GGYRCC 1 cut(s) 1290
BshTI ACCGGT 1 cut(s) 741
BsiHKAI GWGCWC 1 cut(s) 369
BsiSI CCGG 5 cut(s) 227, 742, 901, 1118, 1294
BslFI GGGAC 1 cut(s) 211
BslI CCNNNNNNNGG 3 cut(s) 443, 542, 707
BsmAI GTCTC 2 cut(s) 902, 1191
BsmFI GGGAC 1 cut(s) 211
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 5 cut(s) 150, 402, 448, 546, 1232
Bso31I GGTCTC 1 cut(s) 1191
Bsp1286I GDGCHC 1 cut(s) 369
Bsp13I TCCGGA 1 cut(s) 226
Bsp143I GATC 4 cut(s) 187, 219, 1064, 1126
Bsp1720I GCTNAGC 1 cut(s) 1180
Bsp19I CCATGG 2 cut(s) 914, 941
BspACI CCGC 1 cut(s) 14
BspANI GGCC 5 cut(s) 150, 402, 448, 546, 1232
BspCNI CTCAG 6 cut(s) 88, 400, 806, 874, 1060, 1229
BspEI TCCGGA 1 cut(s) 226
BspHI TCATGA 2 cut(s) 598, 682
BspLI GGNNCC 1 cut(s) 1292
BspMAI CTGCAG 3 cut(s) 442, 676, 1315
BspPI GGATC 1 cut(s) 227
BspT107I GGYRCC 1 cut(s) 1290
BspTNI GGTCTC 1 cut(s) 1191
BsrDI GCAATG 2 cut(s) 57, 210
BsrFI RCCGGY 1 cut(s) 741
BsrI ACTGG 1 cut(s) 1233
BssAI RCCGGY 1 cut(s) 741
BssECI CCNNGG 4 cut(s) 659, 914, 941, 1116
BssMI GATC 4 cut(s) 187, 219, 1064, 1126
BssNAI GTATAC 1 cut(s) 747
BssT1I CCWWGG 3 cut(s) 659, 914, 941
Bst1107I GTATAC 1 cut(s) 747
Bst2UI CCWGG 3 cut(s) 147, 237, 1006
Bst4CI ACNGT 3 cut(s) 106, 553, 848
BstC8I GCNNGC 1 cut(s) 1289
BstDEI CTNAG 7 cut(s) 96, 408, 793, 861, 1068, 1180, 1216
BstDSI CCRYGG 2 cut(s) 914, 941
BstEII GGTNACC 1 cut(s) 566
BstF5I GGATG 4 cut(s) 235, 589, 910, 1354
BstKTI GATC 4 cut(s) 190, 222, 1067, 1129
BstMAI GTCTC 2 cut(s) 902, 1191
BstMBI GATC 4 cut(s) 187, 219, 1064, 1126
BstMWI GCNNNNNNNGC 2 cut(s) 736, 1319
BstNI CCWGG 3 cut(s) 147, 237, 1006
BstNSI RCATGY 1 cut(s) 1049
BstPI GGTNACC 1 cut(s) 566
BstSCI CCNGG 5 cut(s) 145, 235, 900, 1004, 1116
BstSFI CTRYAG 4 cut(s) 438, 672, 1282, 1311
BstV1I GCAGC 2 cut(s) 634, 1297
BstV2I GAAGAC 2 cut(s) 464, 822
BstZ17I GTATAC 1 cut(s) 747
BsuI GTATCC 1 cut(s) 610
BsuRI GGCC 5 cut(s) 150, 402, 448, 546, 1232
BtgI CCRYGG 2 cut(s) 914, 941
BtgZI GCGATG 1 cut(s) 1173
BtsCI GGATG 4 cut(s) 235, 589, 910, 1354
BtsI GCAGTG 1 cut(s) 343
BtsIMutI CAGTG 1 cut(s) 343
Cac8I GCNNGC 1 cut(s) 1289
CciI TCATGA 2 cut(s) 598, 682
Cfr10I RCCGGY 1 cut(s) 741
Cfr13I GGNCC 1 cut(s) 446
CsiI ACCWGGT 1 cut(s) 235
Csp6I GTAC 4 cut(s) 102, 774, 790, 946
CspAI ACCGGT 1 cut(s) 741
CspCI CAANNNNNGTGG 2 cut(s) 593, 628
CviQI GTAC 4 cut(s) 102, 774, 790, 946
DdeI CTNAG 7 cut(s) 96, 408, 793, 861, 1068, 1180, 1216
DpnI GATC 4 cut(s) 189, 221, 1066, 1128
DpnII GATC 4 cut(s) 187, 219, 1064, 1126
DraI TTTAAA 1 cut(s) 760
EaeI YGGCCR 1 cut(s) 400
Eco130I CCWWGG 3 cut(s) 659, 914, 941
Eco31I GGTCTC 1 cut(s) 1191
Eco32I GATATC 1 cut(s) 1349
Eco57I CTGAAG 1 cut(s) 792
Eco91I GGTNACC 1 cut(s) 566
EcoO65I GGTNACC 1 cut(s) 566
EcoRII CCWGG 3 cut(s) 145, 235, 1004
EcoRV GATATC 1 cut(s) 1349
EcoT14I CCWWGG 3 cut(s) 659, 914, 941
ErhI CCWWGG 3 cut(s) 659, 914, 941
FalI AAGNNNNNCTT 2 cut(s) 634, 666
FaqI GGGAC 1 cut(s) 211
FblI GTMKAC 2 cut(s) 746, 1143
Fnu4HI GCNGC 2 cut(s) 648, 1311
FokI GGATG 4 cut(s) 242, 576, 917, 1341
Fsp4HI GCNGC 2 cut(s) 648, 1311
FspBI CTAG 1 cut(s) 243
GluI GCNGC 2 cut(s) 648, 1311
GsuI CTGGAG 2 cut(s) 129, 896
HaeIII GGCC 5 cut(s) 150, 402, 448, 546, 1232
HapII CCGG 5 cut(s) 227, 742, 901, 1118, 1294
HincII GTYRAC 1 cut(s) 898
HindII GTYRAC 1 cut(s) 898
HinfI GANTC 7 cut(s) 500, 527, 664, 990, 1001, 1325, 1367
HpaI GTTAAC 1 cut(s) 898
HpaII CCGG 5 cut(s) 227, 742, 901, 1118, 1294
HphI GGTGA 4 cut(s) 332, 578, 722, 1132
Hpy166II GTNNAC 3 cut(s) 747, 898, 1144
Hpy188I TCNGA 2 cut(s) 356, 1069
Hpy188III TCNNGA 7 cut(s) 191, 227, 599, 683, 799, 1261, 1386
Hpy8I GTNNAC 3 cut(s) 747, 898, 1144
HpyAV CCTTC 6 cut(s) 142, 188, 277, 621, 968, 1169
HpyCH4III ACNGT 3 cut(s) 106, 553, 848
HpyCH4IV ACGT 1 cut(s) 620
HpyCH4V TGCA 9 cut(s) 158, 348, 440, 674, 698, 934, 1088, 1136, 1313
HpyF10VI GCNNNNNNNGC 2 cut(s) 736, 1319
HpyF3I CTNAG 7 cut(s) 96, 408, 793, 861, 1068, 1180, 1216
HpySE526I ACGT 1 cut(s) 620
Kpn2I TCCGGA 1 cut(s) 226
KspAI GTTAAC 1 cut(s) 898
Kzo9I GATC 4 cut(s) 187, 219, 1064, 1126
LmnI GCTCC 5 cut(s) 261, 784, 877, 883, 1307
Lsp1109I GCAGC 2 cut(s) 634, 1297
LweI GCATC 3 cut(s) 118, 442, 773
MabI ACCWGGT 1 cut(s) 235
MaeI CTAG 1 cut(s) 243
MaeII ACGT 1 cut(s) 620
MaeIII GTNAC 3 cut(s) 332, 427, 566
MalI GATC 4 cut(s) 189, 221, 1066, 1128
MboI GATC 4 cut(s) 187, 219, 1064, 1126
MboII GAAGA 3 cut(s) 19, 464, 822
MfeI CAATTG 1 cut(s) 1152
MhlI GDGCHC 1 cut(s) 369
MlsI TGGCCA 1 cut(s) 402
MluCI AATT 6 cut(s) 138, 359, 396, 705, 995, 1152
MluNI TGGCCA 1 cut(s) 402
MlyI GAGTC 3 cut(s) 999, 1010, 1361
Mox20I TGGCCA 1 cut(s) 402
MroI TCCGGA 1 cut(s) 226
MscI TGGCCA 1 cut(s) 402
MseI TTAA 3 cut(s) 609, 759, 897
MslI CAYNNNNRTG 3 cut(s) 83, 1050, 1296
Msp20I TGGCCA 1 cut(s) 402
MspI CCGG 5 cut(s) 227, 742, 901, 1118, 1294
MspR9I CCNGG 5 cut(s) 147, 237, 902, 1006, 1118
MunI CAATTG 1 cut(s) 1152
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 3 cut(s) 147, 237, 1006
MwoI GCNNNNNNNGC 2 cut(s) 736, 1319
NciI CCSGG 2 cut(s) 902, 1118
NcoI CCATGG 2 cut(s) 914, 941
NdeII GATC 4 cut(s) 187, 219, 1064, 1126
NlaIV GGNNCC 1 cut(s) 1292
NmuCI GTSAC 1 cut(s) 566
NspI RCATGY 1 cut(s) 1049
OliI CACNNNNGTG 1 cut(s) 83
PagI TCATGA 2 cut(s) 598, 682
PciI ACATGT 1 cut(s) 1045
PcsI WCGNNNNNNNCGW 1 cut(s) 1069
PctI GAATGC 1 cut(s) 934
PfeI GAWTC 4 cut(s) 500, 527, 664, 1325
PflMI CCANNNNNTGG 1 cut(s) 707
PinAI ACCGGT 1 cut(s) 741
PkrI GCNGC 2 cut(s) 649, 1312
PleI GAGTC 3 cut(s) 998, 1009, 1361
PpsI GAGTC 3 cut(s) 998, 1009, 1361
PscI ACATGT 1 cut(s) 1045
Psp6I CCWGG 3 cut(s) 145, 235, 1004
PspEI GGTNACC 1 cut(s) 566
PspGI CCWGG 3 cut(s) 145, 235, 1004
PspN4I GGNNCC 1 cut(s) 1292
PspPI GGNCC 1 cut(s) 446
PstI CTGCAG 3 cut(s) 442, 676, 1315
RsaI GTAC 4 cut(s) 103, 775, 791, 947
RsaNI GTAC 4 cut(s) 102, 774, 790, 946
RseI CAYNNNNRTG 3 cut(s) 83, 1050, 1296
SaqAI TTAA 3 cut(s) 609, 759, 897
SatI GCNGC 2 cut(s) 648, 1311
Sau3AI GATC 4 cut(s) 187, 219, 1064, 1126
Sau96I GGNCC 1 cut(s) 446
ScaI AGTACT 2 cut(s) 103, 775
SchI GAGTC 3 cut(s) 999, 1010, 1361
ScrFI CCNGG 5 cut(s) 147, 237, 902, 1006, 1118
SduI GDGCHC 1 cut(s) 369
SexAI ACCWGGT 1 cut(s) 235
SfaNI GCATC 3 cut(s) 118, 442, 773
SfcI CTRYAG 4 cut(s) 438, 672, 1282, 1311
SmiMI CAYNNNNRTG 3 cut(s) 83, 1050, 1296
Sse9I AATT 6 cut(s) 138, 359, 396, 705, 995, 1152
SsiI CCGC 1 cut(s) 14
SspI AATATT 2 cut(s) 380, 1084
SspMI CTAG 1 cut(s) 243
StyD4I CCNGG 5 cut(s) 145, 235, 900, 1004, 1116
StyI CCWWGG 3 cut(s) 659, 914, 941
TaaI ACNGT 3 cut(s) 106, 553, 848
TaiI ACGT 1 cut(s) 623
TaqI TCGA 4 cut(s) 108, 999, 1026, 1098
TasI AATT 6 cut(s) 138, 359, 396, 705, 995, 1152
TatI WGTACW 2 cut(s) 101, 773
TfiI GAWTC 4 cut(s) 500, 527, 664, 1325
Tru1I TTAA 3 cut(s) 609, 759, 897
Tru9I TTAA 3 cut(s) 609, 759, 897
TscAI CASTG 1 cut(s) 350
TseFI GTSAC 1 cut(s) 566
TseI GCWGC 2 cut(s) 647, 1310
Tsp45I GTSAC 1 cut(s) 566
TspDTI ATGAA 6 cut(s) 135, 161, 246, 622, 656, 822
TspGWI ACGGA 1 cut(s) 744
TspRI CASTG 1 cut(s) 350
Van91I CCANNNNNTGG 1 cut(s) 707
XapI RAATTY 1 cut(s) 138
XceI RCATGY 1 cut(s) 1049
XmiI GTMKAC 2 cut(s) 746, 1143
XspI CTAG 1 cut(s) 243
ZrmI AGTACT 2 cut(s) 103, 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.