pycom05g05070

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
6007506 .. 6018665
11160 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g05070.3

Sequence Viewer

Length: 1413 bp
ATGGGTGTGCTGGATTTAGCTTCTTCAAGGGCAGCAGCGGCCACTGCTGTAGTGCTGGGTTTGGTCTTGAGCTTTGGAGTGGTGTGCAATGGAGGCAAAACAAGTAGTTTTGTGAGGAAAGTTGAGAAGACTGTGGACATGCCTCTTGACAGCGATGTCTTCAAAGTCCCTCCTGGCTATAATGCACCGCAACAAGTTCATATTACACAAGGAGACCAACTGGGAAAGGGAGTGATCGTTTCATGGGTTACTGTGGATGAACCCGGTTCCAGTAGTGTGCTGTACTGGAGTGCAAACAGCAAGAAAAAGAAGGCCGAGGGCAAAATTACAACCTATAAATTCTACAATTACACTTCCGGTTACATTCACCACACCACTGTCAGAAATTTAATGTTCAATACCAAATACTACTATGTGGTTGGAATTGGCCATACCGAGCGGCAGTTCTGGTTTATAACTCCTCCTGAAGTTGGTCCCGACGCCTCTTACACATTTGGACTCATAGGGGATCTGGGACAGAGCTATGATTCAAATAAGACACTTACTCACTACGAGTTAAACCCACAGAAAGGACAAGCAGTATTGTTTGTTGGGGACCTCTCTTATGCAGATAACTACACAAATCATGACAATGTCAGGTGGGATACTTGGGGAAGATTCGTCGAGAGAAGTGTTGCTTATCAACCTTGGATATGGACTGCAGGAAACCATGAAATCGATTTTGCCCCAGAAATCGGTGAAACTAAACCTTTTAAGCCTTACAGTCACCGGTATCATGTTCCCTATAAAGCATCTGGGAGTACTTCCCCCTTTTGGTATTCGATCAAGAGAGCTTCAGCATACATCATAGTCTTGTCTTCTTATTCGGCATATGGTAAATACACCCCTCAGTACACATGGCTCAAGGAGGAACTACCGAAGGTTAATAGGAGTGAAACACCATGGTTGATTGTTTTAATGCATTCTCCATGGTATAACAGCTACAACTATCACTATATGGAAGGAGAAACCATGAGAGTGATGTATGAGCCATGGTTTGTGACGTACAAAGTCGACGTGGTATTTGCTGGTCATGTCCATGCGTATGAACGATCTGAACGTGTATCCAATGTTGCGTACAACATCGTAAATGGCATTTGCAAACCTGTGAAAGATCAATATGCACCAGTGTACATTACGATTGGTGATGGAGGAAATCTTGAAGGCTTAGCGACAAATATGACAGAACCACAGCCAGATTACTCAGCTTATAGAGAGGCCAGTTTTGGTCATGCTACTTTCGACATCAAGAATCGAACGCATGCCTACTATAGTTGGCACCGTAATCAAGATGGATATGCGGTAAAAGCCGATTCTATGTGGTTTTTCAATAGATTCTATCAGCCTGTAGATGATTCCACAAGTGCTGAATAA

Protein Analysis

471

Amino Acids

53.59

Weight (kDa)

6.76

Isoelectric Point (pI)

35.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 455
AasI GACNNNNNNGTC 1 cut(s) 155
AccB1I GGYRCC 1 cut(s) 1317
AccBSI CCGCTC 1 cut(s) 439
AccI GTMKAC 1 cut(s) 1053
AciI CCGC 4 cut(s) 38, 188, 439, 1340
AclWI GGATC 1 cut(s) 516
AcoI YGGCCR 2 cut(s) 39, 427
AcsI RAATTY 2 cut(s) 338, 385
AcuI CTGAAG 2 cut(s) 486, 819
AcyI GRCGYC 1 cut(s) 480
AfaI GTAC 6 cut(s) 284, 802, 893, 1046, 1118, 1172
AfiI CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
AflIII ACRYGT 1 cut(s) 1099
AgeI ACCGGT 1 cut(s) 768
AgsI TTSAA 6 cut(s) 27, 163, 397, 531, 1202, 1369
AjiI CACGTC 1 cut(s) 1057
AjnI CCWGG 1 cut(s) 172
AluBI AGCT 6 cut(s) 20, 72, 522, 833, 981, 1247
AluI AGCT 6 cut(s) 20, 72, 522, 833, 981, 1247
Alw26I GTCTC 1 cut(s) 207
AlwI GGATC 1 cut(s) 516
AoxI GGCC 4 cut(s) 39, 312, 427, 1257
ApeKI GCWGC 2 cut(s) 32, 35
ApoI RAATTY 2 cut(s) 338, 385
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
AsiGI ACCGGT 1 cut(s) 768
AspS9I GGNCC 2 cut(s) 473, 595
AsuC2I CCSGG 1 cut(s) 264
AsuHPI GGTGA 4 cut(s) 359, 749, 758, 1196
AvaII GGWCC 2 cut(s) 473, 595
BalI TGGCCA 1 cut(s) 429
BanI GGYRCC 1 cut(s) 1317
BbsI GAAGAC 3 cut(s) 134, 151, 849
BbvI GCAGC 2 cut(s) 44, 47
BccI CCATC 2 cut(s) 1181, 1325
BciT130I CCWGG 1 cut(s) 174
BciVI GTATCC 2 cut(s) 637, 1114
BcnI CCSGG 1 cut(s) 264
BcoDI GTCTC 1 cut(s) 207
BfmI CTRYAG 4 cut(s) 48, 699, 1309, 1386
BfuI GTATCC 2 cut(s) 637, 1114
BisI GCNGC 4 cut(s) 33, 36, 39, 440
BlpI GCTNAGC 1 cut(s) 1207
BlsI GCNGC 4 cut(s) 34, 37, 40, 441
BmcAI AGTACT 1 cut(s) 802
Bme1390I CCNGG 2 cut(s) 174, 264
Bme18I GGWCC 2 cut(s) 473, 595
BmgBI CACGTC 1 cut(s) 1057
BmgT120I GGNCC 2 cut(s) 473, 595
BmiI GGNNCC 4 cut(s) 268, 475, 596, 1319
BmrFI CCNGG 2 cut(s) 174, 264
BmrI ACTGGG 1 cut(s) 230
BmsI GCATC 1 cut(s) 800
BmuI ACTGGG 1 cut(s) 230
BpiI GAAGAC 3 cut(s) 134, 151, 849
BpmI CTGGAG 1 cut(s) 307
Bpu1102I GCTNAGC 1 cut(s) 1207
BpuEI CTTGAG 2 cut(s) 88, 887
BpuMI CCSGG 1 cut(s) 264
Bsa29I ATCGAT 1 cut(s) 717
BsaHI GRCGYC 1 cut(s) 480
BsaI GGTCTC 1 cut(s) 207
BsaJI CCNNGG 5 cut(s) 315, 686, 941, 968, 1031
BsaWI WCCGGW 2 cut(s) 356, 768
BsaXI ACNNNNNCTCC 2 cut(s) 222, 252
Bsc4I CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
Bse118I RCCGGY 1 cut(s) 768
Bse1I ACTGG 5 cut(s) 225, 270, 290, 1166, 1260
Bse3DI GCAATG 1 cut(s) 94
BseBI CCWGG 1 cut(s) 174
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 5 cut(s) 315, 686, 941, 968, 1031
BseGI GGATG 1 cut(s) 262
BseLI CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
BseMI GCAATG 1 cut(s) 94
BseMII CTCAG 2 cut(s) 902, 1257
BseNI ACTGG 5 cut(s) 225, 270, 290, 1166, 1260
BseRI GAGGAG 1 cut(s) 450
BseXI GCAGC 2 cut(s) 44, 47
BseYI CCCAGC 1 cut(s) 55
BshFI GGCC 4 cut(s) 41, 314, 429, 1259
BshNI GGYRCC 1 cut(s) 1317
BshTI ACCGGT 1 cut(s) 768
BshVI ATCGAT 1 cut(s) 717
BsiSI CCGG 3 cut(s) 264, 357, 769
BslFI GGGAC 4 cut(s) 152, 459, 528, 608
BslI CCNNNNNNNGG 4 cut(s) 470, 569, 734, 813
BsmAI GTCTC 1 cut(s) 207
BsmFI GGGAC 4 cut(s) 152, 459, 528, 608
BsmI GAATGC 1 cut(s) 961
BsnI GGCC 4 cut(s) 41, 314, 429, 1259
Bso31I GGTCTC 1 cut(s) 207
Bsp1407I TGTACA 1 cut(s) 1170
Bsp143I GATC 5 cut(s) 234, 508, 822, 1091, 1153
Bsp1720I GCTNAGC 1 cut(s) 1207
Bsp19I CCATGG 3 cut(s) 941, 968, 1031
BspACI CCGC 4 cut(s) 38, 188, 439, 1340
BspANI GGCC 4 cut(s) 41, 314, 429, 1259
BspCNI CTCAG 2 cut(s) 901, 1256
BspDI ATCGAT 1 cut(s) 717
BspHI TCATGA 1 cut(s) 625
BspLI GGNNCC 4 cut(s) 268, 475, 596, 1319
BspMAI CTGCAG 1 cut(s) 703
BspPI GGATC 1 cut(s) 516
BspT107I GGYRCC 1 cut(s) 1317
BspTNI GGTCTC 1 cut(s) 207
BsrBI CCGCTC 1 cut(s) 439
BsrDI GCAATG 1 cut(s) 94
BsrFI RCCGGY 1 cut(s) 768
BsrGI TGTACA 1 cut(s) 1170
BsrI ACTGG 5 cut(s) 225, 270, 290, 1166, 1260
BssAI RCCGGY 1 cut(s) 768
BssECI CCNNGG 5 cut(s) 315, 686, 941, 968, 1031
BssMI GATC 5 cut(s) 234, 508, 822, 1091, 1153
BssNI GRCGYC 1 cut(s) 480
BssT1I CCWWGG 4 cut(s) 686, 941, 968, 1031
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 5 cut(s) 133, 253, 379, 764, 1322
BstACI GRCGYC 1 cut(s) 480
BstAUI TGTACA 1 cut(s) 1170
BstC8I GCNNGC 1 cut(s) 1302
BstDEI CTNAG 3 cut(s) 888, 1207, 1243
BstDSI CCRYGG 3 cut(s) 941, 968, 1031
BstF5I GGATG 1 cut(s) 262
BstKTI GATC 5 cut(s) 237, 511, 825, 1094, 1156
BstMAI GTCTC 1 cut(s) 207
BstMBI GATC 5 cut(s) 234, 508, 822, 1091, 1153
BstMWI GCNNNNNNNGC 4 cut(s) 38, 44, 93, 1346
BstNI CCWGG 1 cut(s) 174
BstNSI RCATGY 2 cut(s) 142, 1304
BstSCI CCNGG 2 cut(s) 172, 262
BstSFI CTRYAG 4 cut(s) 48, 699, 1309, 1386
BstV1I GCAGC 2 cut(s) 44, 47
BstV2I GAAGAC 3 cut(s) 134, 151, 849
BstX2I RGATCY 1 cut(s) 508
BstYI RGATCY 1 cut(s) 508
Bsu15I ATCGAT 1 cut(s) 717
BsuI GTATCC 2 cut(s) 637, 1114
BsuRI GGCC 4 cut(s) 41, 314, 429, 1259
BsuTUI ATCGAT 1 cut(s) 717
BtgI CCRYGG 3 cut(s) 941, 968, 1031
BtgZI GCGATG 1 cut(s) 168
BtrI CACGTC 1 cut(s) 1057
BtsCI GGATG 1 cut(s) 262
BtsI GCAGTG 1 cut(s) 42
BtsIMutI CAGTG 3 cut(s) 42, 375, 1173
Cac8I GCNNGC 1 cut(s) 1302
CciI TCATGA 1 cut(s) 625
Cfr10I RCCGGY 1 cut(s) 768
Cfr13I GGNCC 2 cut(s) 473, 595
ClaI ATCGAT 1 cut(s) 717
CseI GACGC 1 cut(s) 488
Csp6I GTAC 6 cut(s) 283, 801, 892, 1045, 1117, 1171
CspAI ACCGGT 1 cut(s) 768
CviQI GTAC 6 cut(s) 283, 801, 892, 1045, 1117, 1171
DdeI CTNAG 3 cut(s) 888, 1207, 1243
DpnI GATC 5 cut(s) 236, 510, 824, 1093, 1155
DpnII GATC 5 cut(s) 234, 508, 822, 1091, 1153
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 2 cut(s) 39, 427
Eco130I CCWWGG 4 cut(s) 686, 941, 968, 1031
Eco31I GGTCTC 1 cut(s) 207
Eco47I GGWCC 2 cut(s) 473, 595
Eco57I CTGAAG 2 cut(s) 486, 819
EcoO109I RGGNCCY 1 cut(s) 595
EcoRII CCWGG 1 cut(s) 172
EcoT14I CCWWGG 4 cut(s) 686, 941, 968, 1031
EcoT22I ATGCAT 1 cut(s) 963
ErhI CCWWGG 4 cut(s) 686, 941, 968, 1031
FalI AAGNNNNNCTT 2 cut(s) 661, 693
FaqI GGGAC 4 cut(s) 152, 459, 528, 608
FauNDI CATATG 1 cut(s) 871
FblI GTMKAC 1 cut(s) 1053
Fnu4HI GCNGC 4 cut(s) 33, 36, 39, 440
FokI GGATG 1 cut(s) 269
Fsp4HI GCNGC 4 cut(s) 33, 36, 39, 440
GluI GCNGC 4 cut(s) 33, 36, 39, 440
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 1 cut(s) 307
HaeIII GGCC 4 cut(s) 41, 314, 429, 1259
HapII CCGG 3 cut(s) 264, 357, 769
HgaI GACGC 1 cut(s) 488
Hin1I GRCGYC 1 cut(s) 480
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HinfI GANTC 7 cut(s) 498, 527, 657, 1291, 1352, 1374, 1394
HpaII CCGG 3 cut(s) 264, 357, 769
HphI GGTGA 4 cut(s) 359, 749, 758, 1196
Hpy166II GTNNAC 4 cut(s) 136, 894, 1054, 1171
Hpy188I TCNGA 2 cut(s) 383, 1096
Hpy8I GTNNAC 4 cut(s) 136, 894, 1054, 1171
Hpy99I CGWCG 3 cut(s) 482, 665, 1058
HpyAV CCTTC 4 cut(s) 304, 913, 995, 1196
HpyCH4III ACNGT 5 cut(s) 133, 253, 379, 764, 1322
HpyCH4IV ACGT 3 cut(s) 1043, 1056, 1099
HpyCH4V TGCA 8 cut(s) 87, 185, 293, 608, 701, 961, 1140, 1163
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 44, 93, 1346
HpyF3I CTNAG 3 cut(s) 888, 1207, 1243
HpySE526I ACGT 3 cut(s) 1043, 1056, 1099
Hsp92I GRCGYC 1 cut(s) 480
Kzo9I GATC 5 cut(s) 234, 508, 822, 1091, 1153
Lsp1109I GCAGC 2 cut(s) 44, 47
LweI GCATC 1 cut(s) 800
MaeII ACGT 3 cut(s) 1043, 1056, 1099
MaeIII GTNAC 4 cut(s) 247, 359, 764, 1039
MalI GATC 5 cut(s) 236, 510, 824, 1093, 1155
MbiI CCGCTC 1 cut(s) 439
MboI GATC 5 cut(s) 234, 508, 822, 1091, 1153
MboII GAAGA 5 cut(s) 15, 139, 151, 666, 849
MflI RGATCY 1 cut(s) 508
MlsI TGGCCA 1 cut(s) 429
MluCI AATT 5 cut(s) 324, 338, 346, 385, 423
MluNI TGGCCA 1 cut(s) 429
MlyI GAGTC 1 cut(s) 492
MmeI TCCRAC 1 cut(s) 400
Mox20I TGGCCA 1 cut(s) 429
Mph1103I ATGCAT 1 cut(s) 963
MscI TGGCCA 1 cut(s) 429
MseI TTAA 5 cut(s) 389, 557, 753, 924, 956
MslI CAYNNNNRTG 4 cut(s) 630, 1016, 1077, 1083
Msp20I TGGCCA 1 cut(s) 429
MspA1I CMGCKG 1 cut(s) 38
MspI CCGG 3 cut(s) 264, 357, 769
MspR9I CCNGG 2 cut(s) 174, 264
Mva1269I GAATGC 1 cut(s) 961
MvaI CCWGG 1 cut(s) 174
MwoI GCNNNNNNNGC 4 cut(s) 38, 44, 93, 1346
NciI CCSGG 1 cut(s) 264
NcoI CCATGG 3 cut(s) 941, 968, 1031
NdeI CATATG 1 cut(s) 871
NdeII GATC 5 cut(s) 234, 508, 822, 1091, 1153
NlaIV GGNNCC 4 cut(s) 268, 475, 596, 1319
NmeAIII GCCGAG 1 cut(s) 340
NmuCI GTSAC 2 cut(s) 764, 1039
NsiI ATGCAT 1 cut(s) 963
NspI RCATGY 2 cut(s) 142, 1304
PaeI GCATGC 1 cut(s) 1304
PagI TCATGA 1 cut(s) 625
PcsI WCGNNNNNNNCGW 1 cut(s) 1096
PctI GAATGC 1 cut(s) 961
PfeI GAWTC 6 cut(s) 527, 657, 1291, 1352, 1374, 1394
PflFI GACNNNGTC 1 cut(s) 632
PinAI ACCGGT 1 cut(s) 768
PkrI GCNGC 4 cut(s) 34, 37, 40, 441
PleI GAGTC 1 cut(s) 492
PpsI GAGTC 1 cut(s) 492
PpuMI RGGWCCY 1 cut(s) 595
PsiI TTATAA 1 cut(s) 455
Psp5II RGGWCCY 1 cut(s) 595
Psp6I CCWGG 1 cut(s) 172
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 4 cut(s) 268, 475, 596, 1319
PspPI GGNCC 2 cut(s) 473, 595
PspPPI RGGWCCY 1 cut(s) 595
PstI CTGCAG 1 cut(s) 703
PsuI RGATCY 1 cut(s) 508
PsyI GACNNNGTC 1 cut(s) 632
RsaI GTAC 6 cut(s) 284, 802, 893, 1046, 1118, 1172
RsaNI GTAC 6 cut(s) 283, 801, 892, 1045, 1117, 1171
RseI CAYNNNNRTG 4 cut(s) 630, 1016, 1077, 1083
SalI GTCGAC 1 cut(s) 1052
SaqAI TTAA 5 cut(s) 389, 557, 753, 924, 956
SatI GCNGC 4 cut(s) 33, 36, 39, 440
Sau3AI GATC 5 cut(s) 234, 508, 822, 1091, 1153
Sau96I GGNCC 2 cut(s) 473, 595
ScaI AGTACT 1 cut(s) 802
SchI GAGTC 1 cut(s) 492
ScrFI CCNGG 2 cut(s) 174, 264
SfaNI GCATC 1 cut(s) 800
SfcI CTRYAG 4 cut(s) 48, 699, 1309, 1386
SinI GGWCC 2 cut(s) 473, 595
SmiMI CAYNNNNRTG 4 cut(s) 630, 1016, 1077, 1083
SmlI CTYRAG 2 cut(s) 67, 902
SmoI CTYRAG 2 cut(s) 67, 902
SphI GCATGC 1 cut(s) 1304
Sse9I AATT 5 cut(s) 324, 338, 346, 385, 423
SsiI CCGC 4 cut(s) 38, 188, 439, 1340
StyD4I CCNGG 2 cut(s) 172, 262
StyI CCWWGG 4 cut(s) 686, 941, 968, 1031
TaaI ACNGT 5 cut(s) 133, 253, 379, 764, 1322
TaiI ACGT 3 cut(s) 1046, 1059, 1102
TaqI TCGA 6 cut(s) 663, 717, 821, 1053, 1281, 1294
TasI AATT 5 cut(s) 324, 338, 346, 385, 423
TatI WGTACW 4 cut(s) 282, 800, 891, 1170
TauI GCSGC 2 cut(s) 41, 442
TfiI GAWTC 6 cut(s) 527, 657, 1291, 1352, 1374, 1394
Tru1I TTAA 5 cut(s) 389, 557, 753, 924, 956
Tru9I TTAA 5 cut(s) 389, 557, 753, 924, 956
TscAI CASTG 3 cut(s) 49, 382, 1173
TseFI GTSAC 2 cut(s) 764, 1039
TseI GCWGC 2 cut(s) 32, 35
Tsp45I GTSAC 2 cut(s) 764, 1039
TspDTI ATGAA 5 cut(s) 188, 231, 273, 726, 1101
TspRI CASTG 3 cut(s) 49, 382, 1173
Tth111I GACNNNGTC 1 cut(s) 632
VpaK11BI GGWCC 2 cut(s) 473, 595
XapI RAATTY 2 cut(s) 338, 385
XceI RCATGY 2 cut(s) 142, 1304
XmiI GTMKAC 1 cut(s) 1053
ZrmI AGTACT 1 cut(s) 802
Zsp2I ATGCAT 1 cut(s) 963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.