RchiOBHm_Chr5g0073481

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
79480826 .. 79484689
3864 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34836

Sequence Viewer

Length: 1428 bp
ATGGGTGTAATGGGTTTTACTTCTGCTTCAGTGAGTTCAGTCTCTTCACTAGCTGCTTTTTTGGTGTTGGGTTTTGTTTTAAATTTGGGGGTGGTTTGTAATGGAGGAAAGACCAGCACTTTTGTGAGGAAAGTGGAGAAAACTGTGGATATGCCTCTAGAGAGCGATGTCTTCAAAGCCCCTCATGGCTATAATGCTCCACAACAAGTTCATATTACACAAGGAGACCATGTGGGAAGGGCTGTGATTGTGTCATGGGTGACTGTGGATGAACCAGGTTCCAGCAAAGTGCTTTATTGGAGCGCAAATACCACGAAAAAGACAGCTGTGGGAAAATTTTACACCTATAAGTTCTACAATTACAGCTCTCCTTACATTCACCATGCATCAATCAGAAATTTAAAGTATAATACCAAATATTACTATGAGGTTGGAATTGGACATACAAAGCGGCAGTTCTGGTTTGTAACTCCTCCAGCAGTTGGGCCAGATGTGCCTTACACATTTGGTCTTATAGGCGATCTGGGCCAGACCTTTGATTCGAATAAGACACTCACTCATTATGAATTAAACCCACAGAAAGGACAAACAGTATTGTATCTTGGTGACCTCTCTTATGCGGATATGTATCCCAATCATGATAATGTCTTATGGGATTCATGGGGAAGATTCGTGGAGCGAAGTGTTGCTTATCAACCTTGGATATGGACTGCAGGGAATCATGAACTTGATTTTGCCCCAAAAATTGGTGAAACCAAACCATTTAAGCCTTACACTCACCGGTATCATGTCCCATATAAGGCATCAGAGAGTACTGCCCCTTTTTGGTACTCGATCAAGAGAGCTTCGTCATACATTATAGTCTTATCTTCATATTCTGCATATGGTAAATACACTCCTCAGTACCAATGGCTGGAGGAGGAGCTACCAAAAGTTAACAGGACTGAGACCCCATGGCTGATTGTTTTAATGCATTCCCCATGGTACAATAGCAACGATTACCACTACATGGAGGGAGAGACCATGAGAGTGATGTATGAGCCATGGTTTGTGAAGTACAAAGTTGACGTGGTATTTGCTGGTCATGTCCATGCCTATGAACGATCTGAGCGTATTTCCAACATTGCATATAACATTGTAAATGGTATTTGTGTTCCCGTGAAAGATCAATCTGCACCTGTGTACATCACCATTGGTGATGGAGGAAATCTTGAAGGCTTAGCTACCAATATGACAGAACCACAGCCAGCGTACTCGGCTTATAGAGAGGCCAGTTTTGGTCATGCCACTTTTGACATCAAGAACAGAACTCATGCTTACTACAGTTGGCACCGTAACCAAGATGGATATGCAGTGCAAGCTGACTCTATGTGGTTTTTCAACAGATACTACTATCCTGTTGATGATTCTACAAGTGCCCAATCATGA

Protein Analysis

475

Amino Acids

54.34

Weight (kDa)

7.02

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 67 - 157 1.5e-16 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 168 - 366 1.6e-26 Calcineurin-like phosphoesterase
Metallophos_C PF14008 392 - 449 6.4e-20 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1329
AccB7I CCANNNNNTGG 4 cut(s) 482, 746, 913, 1009
AciI CCGC 2 cut(s) 451, 620
AcsI RAATTY 3 cut(s) 82, 335, 397
AcuI CTGAAG 1 cut(s) 12
AfaI GTAC 7 cut(s) 814, 830, 905, 986, 1058, 1184, 1253
AfiI CCNNNNNNNGG 7 cut(s) 482, 581, 746, 799, 825, 913, 1009
AgeI ACCGGT 1 cut(s) 780
AgsI TTSAA 3 cut(s) 175, 1214, 1381
AjiI CACGTC 1 cut(s) 1069
AjnI CCWGG 1 cut(s) 274
AleI CACNNNNGTG 1 cut(s) 122
AluBI AGCT 7 cut(s) 53, 326, 366, 845, 925, 1223, 1361
AluI AGCT 7 cut(s) 53, 326, 366, 845, 925, 1223, 1361
Alw26I GTCTC 4 cut(s) 46, 219, 941, 1013
AoxI GGCC 3 cut(s) 485, 526, 1269
ApeKI GCWGC 1 cut(s) 53
ApoI RAATTY 3 cut(s) 82, 335, 397
ArsI GACNNNNNNTTYG 4 cut(s) 523, 555, 1058, 1090
AsiGI ACCGGT 1 cut(s) 780
AspLEI GCGC 1 cut(s) 305
AspS9I GGNCC 2 cut(s) 485, 526
AsuHPI GGTGA 7 cut(s) 271, 371, 617, 761, 770, 1180, 1208
AsuII TTCGAA 1 cut(s) 542
BaeGI GKGCMC 1 cut(s) 1420
BanI GGYRCC 1 cut(s) 1329
BbsI GAAGAC 1 cut(s) 163
BbvI GCAGC 1 cut(s) 40
BccI CCATC 2 cut(s) 1193, 1337
BciT130I CCWGG 1 cut(s) 276
BciVI GTATCC 1 cut(s) 639
BcoDI GTCTC 4 cut(s) 46, 219, 941, 1013
BfaI CTAG 2 cut(s) 50, 158
BfmI CTRYAG 2 cut(s) 711, 1321
BfuI GTATCC 1 cut(s) 639
BisI GCNGC 2 cut(s) 54, 452
BlpI GCTNAGC 1 cut(s) 1219
BlsI GCNGC 2 cut(s) 55, 453
BmcAI AGTACT 1 cut(s) 814
Bme1390I CCNGG 1 cut(s) 276
BmgBI CACGTC 1 cut(s) 1069
BmgT120I GGNCC 2 cut(s) 485, 526
BmiI GGNNCC 2 cut(s) 280, 1331
BmrFI CCNGG 1 cut(s) 276
BmsI GCATC 2 cut(s) 395, 812
BpiI GAAGAC 1 cut(s) 163
BpmI CTGGAG 2 cut(s) 459, 935
Bpu1102I GCTNAGC 1 cut(s) 1219
Bpu14I TTCGAA 1 cut(s) 542
BsaBI GATNNNNATC 1 cut(s) 627
BsaI GGTCTC 3 cut(s) 219, 941, 1013
BsaJI CCNNGG 4 cut(s) 698, 953, 980, 1043
BsaWI WCCGGW 1 cut(s) 780
BsaXI ACNNNNNCTCC 2 cut(s) 216, 246
Bsc4I CCNNNNNNNGG 7 cut(s) 482, 581, 746, 799, 825, 913, 1009
Bse118I RCCGGY 1 cut(s) 780
Bse1I ACTGG 1 cut(s) 1272
Bse3DI GCAATG 1 cut(s) 1122
Bse8I GATNNNNATC 1 cut(s) 627
BseBI CCWGG 1 cut(s) 276
BseDI CCNNGG 4 cut(s) 698, 953, 980, 1043
BseGI GGATG 1 cut(s) 274
BseJI GATNNNNATC 1 cut(s) 627
BseLI CCNNNNNNNGG 7 cut(s) 482, 581, 746, 799, 825, 913, 1009
BseMI GCAATG 1 cut(s) 1122
BseMII CTCAG 3 cut(s) 914, 936, 1098
BseNI ACTGG 1 cut(s) 1272
BseRI GAGGAG 4 cut(s) 462, 888, 932, 935
BseSI GKGCMC 1 cut(s) 1420
BseXI GCAGC 1 cut(s) 40
BsgI GTGCAG 1 cut(s) 1158
BshFI GGCC 3 cut(s) 487, 528, 1271
BshNI GGYRCC 1 cut(s) 1329
BshTI ACCGGT 1 cut(s) 780
BsiSI CCGG 1 cut(s) 781
BslFI GGGAC 1 cut(s) 776
BslI CCNNNNNNNGG 7 cut(s) 482, 581, 746, 799, 825, 913, 1009
BsmAI GTCTC 4 cut(s) 46, 219, 941, 1013
BsmFI GGGAC 1 cut(s) 776
BsmI GAATGC 1 cut(s) 973
BsnI GGCC 3 cut(s) 487, 528, 1271
Bso31I GGTCTC 3 cut(s) 219, 941, 1013
Bsp119I TTCGAA 1 cut(s) 542
Bsp1286I GDGCHC 1 cut(s) 1420
Bsp1407I TGTACA 1 cut(s) 1182
Bsp143I GATC 4 cut(s) 520, 834, 1103, 1165
Bsp1720I GCTNAGC 1 cut(s) 1219
Bsp19I CCATGG 3 cut(s) 953, 980, 1043
BspACI CCGC 2 cut(s) 451, 620
BspANI GGCC 3 cut(s) 487, 528, 1271
BspCNI CTCAG 3 cut(s) 913, 937, 1099
BspHI TCATGA 3 cut(s) 637, 721, 1424
BspLI GGNNCC 2 cut(s) 280, 1331
BspMAI CTGCAG 1 cut(s) 715
BspT104I TTCGAA 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 1329
BspTNI GGTCTC 3 cut(s) 219, 941, 1013
BsrDI GCAATG 1 cut(s) 1122
BsrFI RCCGGY 1 cut(s) 780
BsrGI TGTACA 1 cut(s) 1182
BsrI ACTGG 1 cut(s) 1272
BssAI RCCGGY 1 cut(s) 780
BssECI CCNNGG 4 cut(s) 698, 953, 980, 1043
BssMI GATC 4 cut(s) 520, 834, 1103, 1165
BssT1I CCWWGG 4 cut(s) 698, 953, 980, 1043
Bst2UI CCWGG 1 cut(s) 276
Bst4CI ACNGT 5 cut(s) 145, 265, 592, 1325, 1334
Bst6I CTCTTC 1 cut(s) 49
BstAUI TGTACA 1 cut(s) 1182
BstBI TTCGAA 1 cut(s) 542
BstC8I GCNNGC 2 cut(s) 1248, 1359
BstDEI CTNAG 4 cut(s) 900, 945, 1107, 1219
BstDSI CCRYGG 3 cut(s) 953, 980, 1043
BstEII GGTNACC 1 cut(s) 605
BstF5I GGATG 1 cut(s) 274
BstHHI GCGC 1 cut(s) 305
BstKTI GATC 4 cut(s) 523, 837, 1106, 1168
BstMAI GTCTC 4 cut(s) 46, 219, 941, 1013
BstMBI GATC 4 cut(s) 520, 834, 1103, 1165
BstMWI GCNNNNNNNGC 4 cut(s) 493, 525, 1256, 1358
BstNI CCWGG 1 cut(s) 276
BstPI GGTNACC 1 cut(s) 605
BstSCI CCNGG 1 cut(s) 274
BstSFI CTRYAG 2 cut(s) 711, 1321
BstSLI GKGCMC 1 cut(s) 1420
BstV1I GCAGC 1 cut(s) 40
BstV2I GAAGAC 1 cut(s) 163
BsuI GTATCC 1 cut(s) 639
BsuRI GGCC 3 cut(s) 487, 528, 1271
BtgI CCRYGG 3 cut(s) 953, 980, 1043
BtgZI GCGATG 1 cut(s) 180
BtrI CACGTC 1 cut(s) 1069
BtsCI GGATG 1 cut(s) 274
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 2 cut(s) 36, 1359
Cac8I GCNNGC 2 cut(s) 1248, 1359
CciI TCATGA 3 cut(s) 637, 721, 1424
CfoI GCGC 1 cut(s) 305
Cfr10I RCCGGY 1 cut(s) 780
Cfr13I GGNCC 2 cut(s) 485, 526
CsiI ACCWGGT 1 cut(s) 274
Csp6I GTAC 7 cut(s) 813, 829, 904, 985, 1057, 1183, 1252
CspAI ACCGGT 1 cut(s) 780
CviQI GTAC 7 cut(s) 813, 829, 904, 985, 1057, 1183, 1252
DdeI CTNAG 4 cut(s) 900, 945, 1107, 1219
DpnI GATC 4 cut(s) 522, 836, 1105, 1167
DpnII GATC 4 cut(s) 520, 834, 1103, 1165
DraI TTTAAA 2 cut(s) 81, 402
Eam1104I CTCTTC 1 cut(s) 49
EarI CTCTTC 1 cut(s) 49
Eco130I CCWWGG 4 cut(s) 698, 953, 980, 1043
Eco31I GGTCTC 3 cut(s) 219, 941, 1013
Eco57I CTGAAG 1 cut(s) 12
Eco91I GGTNACC 1 cut(s) 605
EcoO65I GGTNACC 1 cut(s) 605
EcoRII CCWGG 1 cut(s) 274
EcoT14I CCWWGG 4 cut(s) 698, 953, 980, 1043
EcoT22I ATGCAT 2 cut(s) 388, 975
ErhI CCWWGG 4 cut(s) 698, 953, 980, 1043
FalI AAGNNNNNCTT 2 cut(s) 673, 705
FaqI GGGAC 1 cut(s) 776
FauNDI CATATG 1 cut(s) 883
Fnu4HI GCNGC 2 cut(s) 54, 452
FokI GGATG 1 cut(s) 281
Fsp4HI GCNGC 2 cut(s) 54, 452
FspBI CTAG 2 cut(s) 50, 158
GlaI GCGC 1 cut(s) 304
GluI GCNGC 2 cut(s) 54, 452
GsuI CTGGAG 2 cut(s) 459, 935
HaeIII GGCC 3 cut(s) 487, 528, 1271
HapII CCGG 1 cut(s) 781
HhaI GCGC 1 cut(s) 305
Hin6I GCGC 1 cut(s) 303
HinP1I GCGC 1 cut(s) 303
HincII GTYRAC 2 cut(s) 937, 1066
HindII GTYRAC 2 cut(s) 937, 1066
HinfI GANTC 6 cut(s) 539, 656, 669, 718, 1364, 1406
HpaI GTTAAC 1 cut(s) 937
HpaII CCGG 1 cut(s) 781
HphI GGTGA 7 cut(s) 271, 371, 617, 761, 770, 1180, 1208
Hpy166II GTNNAC 3 cut(s) 937, 1066, 1183
Hpy188I TCNGA 3 cut(s) 395, 808, 1108
Hpy188III TCNNGA 7 cut(s) 158, 638, 722, 838, 1211, 1300, 1425
Hpy8I GTNNAC 3 cut(s) 937, 1066, 1183
HpyAV CCTTC 2 cut(s) 231, 1208
HpyCH4III ACNGT 5 cut(s) 145, 265, 592, 1325, 1334
HpyCH4IV ACGT 1 cut(s) 1068
HpyCH4V TGCA 8 cut(s) 386, 713, 881, 973, 1127, 1175, 1352, 1357
HpyF10VI GCNNNNNNNGC 4 cut(s) 493, 525, 1256, 1358
HpyF3I CTNAG 4 cut(s) 900, 945, 1107, 1219
HpySE526I ACGT 1 cut(s) 1068
HspAI GCGC 1 cut(s) 303
KspAI GTTAAC 1 cut(s) 937
Kzo9I GATC 4 cut(s) 520, 834, 1103, 1165
LmnI GCTCC 4 cut(s) 202, 300, 676, 922
Lsp1109I GCAGC 1 cut(s) 40
LweI GCATC 2 cut(s) 395, 812
MabI ACCWGGT 1 cut(s) 274
MaeI CTAG 2 cut(s) 50, 158
MaeII ACGT 1 cut(s) 1068
MaeIII GTNAC 4 cut(s) 259, 466, 605, 1334
MalI GATC 4 cut(s) 522, 836, 1105, 1167
MboI GATC 4 cut(s) 520, 834, 1103, 1165
MboII GAAGA 4 cut(s) 36, 163, 678, 861
MhlI GDGCHC 1 cut(s) 1420
MluCI AATT 7 cut(s) 82, 335, 358, 397, 435, 566, 744
MlyI GAGTC 1 cut(s) 1358
MmeI TCCRAC 2 cut(s) 412, 1143
Mph1103I ATGCAT 2 cut(s) 388, 975
MseI TTAA 6 cut(s) 80, 401, 569, 765, 936, 968
MslI CAYNNNNRTG 5 cut(s) 122, 642, 1028, 1089, 1095
MspA1I CMGCKG 1 cut(s) 326
MspI CCGG 1 cut(s) 781
MspR9I CCNGG 1 cut(s) 276
Mva1269I GAATGC 1 cut(s) 973
MvaI CCWGG 1 cut(s) 276
MwoI GCNNNNNNNGC 4 cut(s) 493, 525, 1256, 1358
NcoI CCATGG 3 cut(s) 953, 980, 1043
NdeI CATATG 1 cut(s) 883
NdeII GATC 4 cut(s) 520, 834, 1103, 1165
NlaIV GGNNCC 2 cut(s) 280, 1331
NmeAIII GCCGAG 1 cut(s) 1235
NmuCI GTSAC 2 cut(s) 259, 605
NsiI ATGCAT 2 cut(s) 388, 975
NspV TTCGAA 1 cut(s) 542
OliI CACNNNNGTG 1 cut(s) 122
PagI TCATGA 3 cut(s) 637, 721, 1424
PcsI WCGNNNNNNNCGW 1 cut(s) 1108
PctI GAATGC 1 cut(s) 973
PfeI GAWTC 5 cut(s) 539, 656, 669, 718, 1406
PflMI CCANNNNNTGG 4 cut(s) 482, 746, 913, 1009
PinAI ACCGGT 1 cut(s) 780
PkrI GCNGC 2 cut(s) 55, 453
PleI GAGTC 1 cut(s) 1358
PpsI GAGTC 1 cut(s) 1358
Psp6I CCWGG 1 cut(s) 274
PspEI GGTNACC 1 cut(s) 605
PspGI CCWGG 1 cut(s) 274
PspN4I GGNNCC 2 cut(s) 280, 1331
PspPI GGNCC 2 cut(s) 485, 526
PstI CTGCAG 1 cut(s) 715
PvuII CAGCTG 1 cut(s) 326
RsaI GTAC 7 cut(s) 814, 830, 905, 986, 1058, 1184, 1253
RsaNI GTAC 7 cut(s) 813, 829, 904, 985, 1057, 1183, 1252
RseI CAYNNNNRTG 5 cut(s) 122, 642, 1028, 1089, 1095
SaqAI TTAA 6 cut(s) 80, 401, 569, 765, 936, 968
SatI GCNGC 2 cut(s) 54, 452
Sau3AI GATC 4 cut(s) 520, 834, 1103, 1165
Sau96I GGNCC 2 cut(s) 485, 526
ScaI AGTACT 1 cut(s) 814
SchI GAGTC 1 cut(s) 1358
ScrFI CCNGG 1 cut(s) 276
SduI GDGCHC 1 cut(s) 1420
SexAI ACCWGGT 1 cut(s) 274
SfaNI GCATC 2 cut(s) 395, 812
SfcI CTRYAG 2 cut(s) 711, 1321
SfuI TTCGAA 1 cut(s) 542
SmiMI CAYNNNNRTG 5 cut(s) 122, 642, 1028, 1089, 1095
Sse9I AATT 7 cut(s) 82, 335, 358, 397, 435, 566, 744
SsiI CCGC 2 cut(s) 451, 620
SspI AATATT 1 cut(s) 419
SspMI CTAG 2 cut(s) 50, 158
StyD4I CCNGG 1 cut(s) 274
StyI CCWWGG 4 cut(s) 698, 953, 980, 1043
TaaI ACNGT 5 cut(s) 145, 265, 592, 1325, 1334
TaiI ACGT 1 cut(s) 1071
TaqI TCGA 2 cut(s) 542, 833
TasI AATT 7 cut(s) 82, 335, 358, 397, 435, 566, 744
TatI WGTACW 3 cut(s) 812, 1056, 1182
TauI GCSGC 1 cut(s) 454
TfiI GAWTC 5 cut(s) 539, 656, 669, 718, 1406
Tru1I TTAA 6 cut(s) 80, 401, 569, 765, 936, 968
Tru9I TTAA 6 cut(s) 80, 401, 569, 765, 936, 968
TscAI CASTG 2 cut(s) 36, 1359
TseFI GTSAC 2 cut(s) 259, 605
TseI GCWGC 1 cut(s) 53
Tsp45I GTSAC 2 cut(s) 259, 605
TspDTI ATGAA 7 cut(s) 200, 285, 579, 648, 738, 861, 1113
TspRI CASTG 2 cut(s) 36, 1359
Van91I CCANNNNNTGG 4 cut(s) 482, 746, 913, 1009
XapI RAATTY 3 cut(s) 82, 335, 397
XbaI TCTAGA 1 cut(s) 157
XspI CTAG 2 cut(s) 50, 158
ZrmI AGTACT 1 cut(s) 814
Zsp2I ATGCAT 2 cut(s) 388, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.