Belongs to the universal ribosomal protein uL3 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_L3 | PF00297 | 1 - 370 | 9.6e-196 | Ribosomal protein L3 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 938 |
| AciI | CCGC | 1 cut(s) | 1027 |
| AclWI | GGATC | 4 cut(s) | 30, 43, 199, 544 |
| AcsI | RAATTY | 2 cut(s) | 587, 852 |
| AcuI | CTGAAG | 1 cut(s) | 542 |
| AcvI | CACGTG | 1 cut(s) | 290 |
| AdeI | CACNNNGTG | 1 cut(s) | 315 |
| AfaI | GTAC | 3 cut(s) | 398, 835, 1148 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 32, 938, 953, 1011 |
| AflIII | ACRYGT | 1 cut(s) | 215 |
| AgsI | TTSAA | 3 cut(s) | 307, 440, 587 |
| AjnI | CCWGG | 5 cut(s) | 26, 187, 552, 716, 803 |
| AleI | CACNNNNGTG | 1 cut(s) | 893 |
| AluBI | AGCT | 6 cut(s) | 65, 127, 199, 386, 600, 862 |
| AluI | AGCT | 6 cut(s) | 65, 127, 199, 386, 600, 862 |
| Alw21I | GWGCWC | 1 cut(s) | 24 |
| Alw26I | GTCTC | 3 cut(s) | 9, 206, 1038 |
| AlwI | GGATC | 4 cut(s) | 30, 43, 199, 544 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1036 |
| AoxI | GGCC | 1 cut(s) | 292 |
| ApeKI | GCWGC | 2 cut(s) | 65, 199 |
| ApoI | RAATTY | 2 cut(s) | 587, 852 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 92 |
| AspLEI | GCGC | 1 cut(s) | 1119 |
| AspS9I | GGNCC | 1 cut(s) | 1001 |
| AsuHPI | GGTGA | 4 cut(s) | 568, 706, 821, 919 |
| AsuII | TTCGAA | 1 cut(s) | 505 |
| AvaII | GGWCC | 1 cut(s) | 1001 |
| BamHI | GGATCC | 1 cut(s) | 35 |
| BanII | GRGCYC | 1 cut(s) | 322 |
| BbrPI | CACGTG | 1 cut(s) | 290 |
| BbsI | GAAGAC | 1 cut(s) | 625 |
| Bbv12I | GWGCWC | 1 cut(s) | 24 |
| BbvI | GCAGC | 2 cut(s) | 52, 186 |
| BccI | CCATC | 2 cut(s) | 118, 834 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1034, 1068 |
| BciT130I | CCWGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| BciVI | GTATCC | 1 cut(s) | 815 |
| BclI | TGATCA | 1 cut(s) | 981 |
| BcoDI | GTCTC | 3 cut(s) | 9, 206, 1038 |
| BfaI | CTAG | 1 cut(s) | 783 |
| BfoI | RGCGCY | 1 cut(s) | 1120 |
| BfuI | GTATCC | 1 cut(s) | 815 |
| BisI | GCNGC | 2 cut(s) | 66, 200 |
| BlpI | GCTNAGC | 1 cut(s) | 321 |
| BlsI | GCNGC | 2 cut(s) | 67, 201 |
| BmcAI | AGTACT | 2 cut(s) | 398, 1148 |
| Bme1390I | CCNGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| Bme18I | GGWCC | 1 cut(s) | 1001 |
| BmgT120I | GGNCC | 1 cut(s) | 1001 |
| BmiI | GGNNCC | 3 cut(s) | 37, 243, 1003 |
| BmrFI | CCNGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| BmsI | GCATC | 4 cut(s) | 334, 616, 784, 980 |
| BpiI | GAAGAC | 1 cut(s) | 625 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 321 |
| Bpu14I | TTCGAA | 1 cut(s) | 505 |
| BpuEI | CTTGAG | 4 cut(s) | 1025, 1064, 1085, 1145 |
| Bsa29I | ATCGAT | 1 cut(s) | 1089 |
| BsaAI | YACGTR | 2 cut(s) | 290, 728 |
| BsaJI | CCNNGG | 6 cut(s) | 26, 40, 53, 99, 139, 804 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 32, 938, 953, 1011 |
| Bse1I | ACTGG | 2 cut(s) | 368, 1030 |
| BseBI | CCWGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| BseCI | ATCGAT | 1 cut(s) | 1089 |
| BseDI | CCNNGG | 6 cut(s) | 26, 40, 53, 99, 139, 804 |
| BseGI | GGATG | 6 cut(s) | 109, 110, 162, 181, 775, 995 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 32, 938, 953, 1011 |
| BseMII | CTCAG | 4 cut(s) | 335, 343, 891, 906 |
| BseNI | ACTGG | 2 cut(s) | 368, 1030 |
| BseRI | GAGGAG | 4 cut(s) | 234, 350, 361, 1087 |
| BseXI | GCAGC | 2 cut(s) | 52, 186 |
| BseYI | CCCAGC | 1 cut(s) | 152 |
| BsgI | GTGCAG | 1 cut(s) | 185 |
| BshFI | GGCC | 1 cut(s) | 294 |
| BshVI | ATCGAT | 1 cut(s) | 1089 |
| BsiHKAI | GWGCWC | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 32, 938, 953, 1011 |
| BsmAI | GTCTC | 3 cut(s) | 9, 206, 1038 |
| BsnI | GGCC | 1 cut(s) | 294 |
| Bsp119I | TTCGAA | 1 cut(s) | 505 |
| Bsp1286I | GDGCHC | 2 cut(s) | 24, 322 |
| Bsp143I | GATC | 4 cut(s) | 35, 191, 549, 981 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 321 |
| BspACI | CCGC | 1 cut(s) | 1027 |
| BspANI | GGCC | 1 cut(s) | 294 |
| BspCNI | CTCAG | 4 cut(s) | 334, 342, 892, 907 |
| BspDI | ATCGAT | 1 cut(s) | 1089 |
| BspLI | GGNNCC | 3 cut(s) | 37, 243, 1003 |
| BspPI | GGATC | 4 cut(s) | 30, 43, 199, 544 |
| BspT104I | TTCGAA | 1 cut(s) | 505 |
| BsrI | ACTGG | 2 cut(s) | 368, 1030 |
| BssECI | CCNNGG | 6 cut(s) | 26, 40, 53, 99, 139, 804 |
| BssMI | GATC | 4 cut(s) | 35, 191, 549, 981 |
| BssT1I | CCWWGG | 4 cut(s) | 40, 53, 99, 139 |
| Bst2UI | CCWGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| Bst4CI | ACNGT | 6 cut(s) | 313, 447, 475, 799, 833, 956 |
| Bst6I | CTCTTC | 2 cut(s) | 425, 1004 |
| BstBAI | YACGTR | 2 cut(s) | 290, 728 |
| BstBI | TTCGAA | 1 cut(s) | 505 |
| BstC8I | GCNNGC | 2 cut(s) | 63, 125 |
| BstDEI | CTNAG | 4 cut(s) | 321, 329, 900, 915 |
| BstF5I | GGATG | 6 cut(s) | 109, 110, 162, 181, 775, 995 |
| BstH2I | RGCGCY | 1 cut(s) | 1120 |
| BstHHI | GCGC | 1 cut(s) | 1119 |
| BstKTI | GATC | 4 cut(s) | 38, 194, 552, 984 |
| BstMAI | GTCTC | 3 cut(s) | 9, 206, 1038 |
| BstMBI | GATC | 4 cut(s) | 35, 191, 549, 981 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 28, 124 |
| BstNI | CCWGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| BstNSI | RCATGY | 1 cut(s) | 219 |
| BstSCI | CCNGG | 5 cut(s) | 26, 187, 552, 716, 803 |
| BstV1I | GCAGC | 2 cut(s) | 52, 186 |
| BstV2I | GAAGAC | 1 cut(s) | 625 |
| BstX2I | RGATCY | 2 cut(s) | 35, 549 |
| BstYI | RGATCY | 2 cut(s) | 35, 549 |
| Bsu15I | ATCGAT | 1 cut(s) | 1089 |
| BsuI | GTATCC | 1 cut(s) | 815 |
| BsuRI | GGCC | 1 cut(s) | 294 |
| BsuTUI | ATCGAT | 1 cut(s) | 1089 |
| BtsCI | GGATG | 6 cut(s) | 109, 110, 162, 181, 775, 995 |
| BtsI | GCAGTG | 1 cut(s) | 888 |
| BtsIMutI | CAGTG | 3 cut(s) | 318, 337, 888 |
| Cac8I | GCNNGC | 2 cut(s) | 63, 125 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1036 |
| CfoI | GCGC | 1 cut(s) | 1119 |
| Cfr13I | GGNCC | 1 cut(s) | 1001 |
| ClaI | ATCGAT | 1 cut(s) | 1089 |
| Csp6I | GTAC | 3 cut(s) | 397, 834, 1147 |
| CviAII | CATG | 5 cut(s) | 32, 216, 544, 771, 1112 |
| CviQI | GTAC | 3 cut(s) | 397, 834, 1147 |
| DdeI | CTNAG | 4 cut(s) | 321, 329, 900, 915 |
| DpnI | GATC | 4 cut(s) | 37, 193, 551, 983 |
| DpnII | GATC | 4 cut(s) | 35, 191, 549, 981 |
| DraIII | CACNNNGTG | 1 cut(s) | 315 |
| Eam1104I | CTCTTC | 2 cut(s) | 425, 1004 |
| EarI | CTCTTC | 2 cut(s) | 425, 1004 |
| EciI | GGCGGA | 1 cut(s) | 1016 |
| Eco130I | CCWWGG | 4 cut(s) | 40, 53, 99, 139 |
| Eco24I | GRGCYC | 1 cut(s) | 322 |
| Eco47I | GGWCC | 1 cut(s) | 1001 |
| Eco57I | CTGAAG | 1 cut(s) | 542 |
| Eco72I | CACGTG | 1 cut(s) | 290 |
| EcoRII | CCWGG | 5 cut(s) | 26, 187, 552, 716, 803 |
| EcoT14I | CCWWGG | 4 cut(s) | 40, 53, 99, 139 |
| EcoT38I | GRGCYC | 1 cut(s) | 322 |
| ErhI | CCWWGG | 4 cut(s) | 40, 53, 99, 139 |
| FaeI | CATG | 5 cut(s) | 35, 219, 547, 774, 1115 |
| FatI | CATG | 5 cut(s) | 31, 215, 543, 770, 1111 |
| FbaI | TGATCA | 1 cut(s) | 981 |
| Fnu4HI | GCNGC | 2 cut(s) | 66, 200 |
| FokI | GGATG | 6 cut(s) | 97, 116, 169, 188, 762, 1002 |
| FriOI | GRGCYC | 1 cut(s) | 322 |
| Fsp4HI | GCNGC | 2 cut(s) | 66, 200 |
| FspBI | CTAG | 1 cut(s) | 783 |
| GlaI | GCGC | 1 cut(s) | 1118 |
| GluI | GCNGC | 2 cut(s) | 66, 200 |
| GsaI | CCCAGC | 1 cut(s) | 156 |
| HaeII | RGCGCY | 1 cut(s) | 1120 |
| HaeIII | GGCC | 1 cut(s) | 294 |
| HhaI | GCGC | 1 cut(s) | 1119 |
| Hin1II | CATG | 5 cut(s) | 35, 219, 547, 774, 1115 |
| Hin6I | GCGC | 1 cut(s) | 1117 |
| HinP1I | GCGC | 1 cut(s) | 1117 |
| HindIII | AAGCTT | 3 cut(s) | 384, 598, 860 |
| HinfI | GANTC | 3 cut(s) | 160, 502, 881 |
| HphI | GGTGA | 4 cut(s) | 568, 706, 821, 919 |
| Hpy166II | GTNNAC | 1 cut(s) | 559 |
| Hpy188I | TCNGA | 3 cut(s) | 522, 816, 981 |
| Hpy188III | TCNNGA | 3 cut(s) | 637, 1064, 1123 |
| Hpy8I | GTNNAC | 1 cut(s) | 559 |
| HpyAV | CCTTC | 5 cut(s) | 82, 202, 305, 416, 508 |
| HpyCH4III | ACNGT | 6 cut(s) | 313, 447, 475, 799, 833, 956 |
| HpyCH4IV | ACGT | 2 cut(s) | 289, 727 |
| HpyCH4V | TGCA | 5 cut(s) | 123, 202, 369, 392, 770 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 28, 124 |
| HpyF3I | CTNAG | 4 cut(s) | 321, 329, 900, 915 |
| HpySE526I | ACGT | 2 cut(s) | 289, 727 |
| Hsp92II | CATG | 5 cut(s) | 35, 219, 547, 774, 1115 |
| HspAI | GCGC | 1 cut(s) | 1117 |
| Ksp22I | TGATCA | 1 cut(s) | 981 |
| Kzo9I | GATC | 4 cut(s) | 35, 191, 549, 981 |
| LmnI | GCTCC | 1 cut(s) | 247 |
| Lsp1109I | GCAGC | 2 cut(s) | 52, 186 |
| LweI | GCATC | 4 cut(s) | 334, 616, 784, 980 |
| MaeI | CTAG | 1 cut(s) | 783 |
| MaeII | ACGT | 2 cut(s) | 289, 727 |
| MaeIII | GTNAC | 8 cut(s) | 71, 143, 226, 667, 697, 712, 895, 1018 |
| MalI | GATC | 4 cut(s) | 37, 193, 551, 983 |
| MboI | GATC | 4 cut(s) | 35, 191, 549, 981 |
| MboII | GAAGA | 6 cut(s) | 41, 391, 442, 541, 625, 1021 |
| MfeI | CAATTG | 2 cut(s) | 570, 933 |
| MflI | RGATCY | 2 cut(s) | 35, 549 |
| MhlI | GDGCHC | 2 cut(s) | 24, 322 |
| MluCI | AATT | 4 cut(s) | 570, 587, 852, 933 |
| MlyI | GAGTC | 1 cut(s) | 154 |
| MmeI | TCCRAC | 1 cut(s) | 979 |
| MroXI | GAANNNNTTC | 1 cut(s) | 92 |
| MseI | TTAA | 2 cut(s) | 342, 462 |
| MslI | CAYNNNNRTG | 3 cut(s) | 330, 893, 954 |
| MspR9I | CCNGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| MunI | CAATTG | 2 cut(s) | 570, 933 |
| MvaI | CCWGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 28, 124 |
| NdeII | GATC | 4 cut(s) | 35, 191, 549, 981 |
| NlaIII | CATG | 5 cut(s) | 35, 219, 547, 774, 1115 |
| NlaIV | GGNNCC | 3 cut(s) | 37, 243, 1003 |
| NmuCI | GTSAC | 5 cut(s) | 71, 226, 667, 712, 895 |
| NspI | RCATGY | 1 cut(s) | 219 |
| NspV | TTCGAA | 1 cut(s) | 505 |
| OliI | CACNNNNGTG | 1 cut(s) | 893 |
| PciI | ACATGT | 1 cut(s) | 215 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 295 |
| PdmI | GAANNNNTTC | 1 cut(s) | 92 |
| PfeI | GAWTC | 2 cut(s) | 502, 881 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 938 |
| PkrI | GCNGC | 2 cut(s) | 67, 201 |
| PleI | GAGTC | 1 cut(s) | 154 |
| PmaCI | CACGTG | 1 cut(s) | 290 |
| PmlI | CACGTG | 1 cut(s) | 290 |
| PpsI | GAGTC | 1 cut(s) | 154 |
| Ppu21I | YACGTR | 2 cut(s) | 290, 728 |
| PscI | ACATGT | 1 cut(s) | 215 |
| Psp6I | CCWGG | 5 cut(s) | 26, 187, 552, 716, 803 |
| PspCI | CACGTG | 1 cut(s) | 290 |
| PspFI | CCCAGC | 1 cut(s) | 152 |
| PspGI | CCWGG | 5 cut(s) | 26, 187, 552, 716, 803 |
| PspN4I | GGNNCC | 3 cut(s) | 37, 243, 1003 |
| PspPI | GGNCC | 1 cut(s) | 1001 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1036 |
| PsuI | RGATCY | 2 cut(s) | 35, 549 |
| RsaI | GTAC | 3 cut(s) | 398, 835, 1148 |
| RsaNI | GTAC | 3 cut(s) | 397, 834, 1147 |
| RseI | CAYNNNNRTG | 3 cut(s) | 330, 893, 954 |
| SaqAI | TTAA | 2 cut(s) | 342, 462 |
| SatI | GCNGC | 2 cut(s) | 66, 200 |
| Sau3AI | GATC | 4 cut(s) | 35, 191, 549, 981 |
| Sau96I | GGNCC | 1 cut(s) | 1001 |
| ScaI | AGTACT | 2 cut(s) | 398, 1148 |
| SchI | GAGTC | 1 cut(s) | 154 |
| ScrFI | CCNGG | 5 cut(s) | 28, 189, 554, 718, 805 |
| SduI | GDGCHC | 2 cut(s) | 24, 322 |
| SfaNI | GCATC | 4 cut(s) | 334, 616, 784, 980 |
| SfuI | TTCGAA | 1 cut(s) | 505 |
| SinI | GGWCC | 1 cut(s) | 1001 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 330, 893, 954 |
| SmlI | CTYRAG | 4 cut(s) | 1040, 1064, 1079, 1160 |
| SmoI | CTYRAG | 4 cut(s) | 1040, 1064, 1079, 1160 |
| Sse9I | AATT | 4 cut(s) | 570, 587, 852, 933 |
| SsiI | CCGC | 1 cut(s) | 1027 |
| SspI | AATATT | 1 cut(s) | 467 |
| SspMI | CTAG | 1 cut(s) | 783 |
| StyD4I | CCNGG | 5 cut(s) | 26, 187, 552, 716, 803 |
| StyI | CCWWGG | 4 cut(s) | 40, 53, 99, 139 |
| TaaI | ACNGT | 6 cut(s) | 313, 447, 475, 799, 833, 956 |
| TaiI | ACGT | 2 cut(s) | 292, 730 |
| TaqI | TCGA | 4 cut(s) | 18, 481, 505, 1089 |
| TasI | AATT | 4 cut(s) | 570, 587, 852, 933 |
| TatI | WGTACW | 2 cut(s) | 396, 1146 |
| TfiI | GAWTC | 2 cut(s) | 502, 881 |
| Tru1I | TTAA | 2 cut(s) | 342, 462 |
| Tru9I | TTAA | 2 cut(s) | 342, 462 |
| TscAI | CASTG | 3 cut(s) | 318, 337, 895 |
| TseFI | GTSAC | 5 cut(s) | 71, 226, 667, 712, 895 |
| TseI | GCWGC | 2 cut(s) | 65, 199 |
| Tsp45I | GTSAC | 5 cut(s) | 71, 226, 667, 712, 895 |
| TspDTI | ATGAA | 6 cut(s) | 426, 435, 527, 780, 857, 1075 |
| TspGWI | ACGGA | 1 cut(s) | 576 |
| TspRI | CASTG | 3 cut(s) | 318, 337, 895 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 938 |
| VpaK11BI | GGWCC | 1 cut(s) | 1001 |
| XapI | RAATTY | 2 cut(s) | 587, 852 |
| XceI | RCATGY | 1 cut(s) | 219 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1012 |
| XmnI | GAANNNNTTC | 1 cut(s) | 92 |
| XspI | CTAG | 1 cut(s) | 783 |
| ZrmI | AGTACT | 2 cut(s) | 398, 1148 |