Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0001100

Physical Location & Seq

Genomic Coordinates Forward (+)

5203251 .. 5206646

Gene Structure 3396 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1044600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1194 bp

ATGCTATTATTGAAGAGGAGGAAGATGTCTCACAGGAAGTTTGAGCACCCCAGACATGGATCCCTTGGATTTCTTCCAAGGAAGCGTGCCGCTCGTCACAGAGGCAAAGTGAAGGCATTCCCCAAGGATGACCCATCCAAACCCTGCAAGCTGACTGCTTTCCTTGGTTACAAGGCCGGGATGACTCACATTGTCAGAGATGTTGAGAAGCCTGGATCAAAGCTTCACAAGAAGGAGACGTGCGAGGCTGTTACTATCATTGAGGCTCCTCCCATGGTGGTTGTTGGAGTTGTTGGTTATGTGAAGACACCACGTGGCCTTCGTTCTCTGAACACAGTGTGGGCTCAGCATCTGAGTGAGGAGGTGAAGAGGAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCTCAAAGTACTCAAAGAACTATGAAAGTGAGGAGGGAAAGAAGAGTATTGAATCCCAGTTTGAGAAACTTATCAAGTATGCTACTGTCATCCGGGTGTTGGCTCACACTCAGATTAGGAAGATGAAGGGATTGAAACAAAAGAAAGCACATCTTATGGAGATCCAGGTGAATGGAGGAACCATTGCCCAGAAAGTTGAATTTGCCAAAAGCTTCTTTGAGAAGCAGATCCCTATTGATGCTGTTTTCCAGAAGGATGAAATGATTGACATCATTGGTGTCACAAAGGGTAAAGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCGGCTTCCTCGCAAGACTCATAGGGGTCTGAGGAAGGTGGCTTGTATCGGGGCCTGGCATCCTGCTAGAGTCTCATTTACAGTTGCCAGGGCTGGTCAGAATGGATACCACCACCGGACTGAGATGAACAAGAAGATTTATAAGCTCGGAAAGGCTGGGCAGGAGTCACACACTGCTGTCACTGAGTTTGACAGGACCGAGAAAGACATCACTCCCATTGGTGGCTTCCCTCACTATGGTGTGGTGAAGGATGACTACATTCTGATCAAGGGATGCTGTGTTGGACCTAAGAAGAGGGTCGTCACTCTTCGCCAGTCCCTTCTCAAGCAGACCTCTCGTCTTGCTCTCGAGGATATCAAGCTCAAGTTCATCGATACCTCCTCAAAGTTTGGCCATGGTCGCTTCCAGACAACACAGGAGAAACAGAAGTACTACGGACGTCTCAAGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022625 GO:0022626 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L3

Protein Analysis

398

Amino Acids

45.39

Weight (kDa)

10.22

Isoelectric Point (pI)

34.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_L3	PF00297	9 - 378	4.5e-196	Ribosomal protein L3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G61580
fragaria_vesca	FvH4_2g13300 FvH4_2g13300 FvH4_2g13300 FvH4_6g25400 FvH4_6g25400 FvH4_6g25400 FvH4_6g25400
malus_domestica	MD04G1044600.v1.1 MD08G1242000.v1.1 MD15G1435700.v1.1
prunus_persica	Prupe.1G579300_v2.0.a1 Prupe.1G579300_v2.0.a1 Prupe.8G036200_v2.0.a1 Prupe.8G036200_v2.0.a1
pyrus_communis	pycom15g38440
rosa_chinensis	RchiOBHm_Chr2g0125851 RchiOBHm_Chr6g0274741 RchiOBHm_Chr7g0220671
rosa_laevigata	RLG00000002211
rosa_multiflora	Rmu_co8485815.1_g000001 Rmu_sc0006216.1_g000001 Rmu_sc0006223.1_g000009 Rmu_sc0013532.1_g000002 Rmu_ssc0000189.1_g000006
rosa_roxburghii	Rroxscaffold_2G00117610 Rroxscaffold_2G00117670 Rroxscaffold_3G00239250 Rroxscaffold_7G00193980
rosa_rugosa	Rorug02G0259500 Rorug02G0259600 Rorug02G0259700 Rorug02G0259800 Rorug02G0259900 Rorug06G0083600 Rorug07G0195800 Rorug07G0195900 Rorug07G0196000.1 Rorug07G0196100
rosa_samantha	Rh2CG307400 Rh6AG199400 Rh6BG203200 Rh6CG203400 Rh7AG336800 Rh7BG327700 Rh7CG354800 Rh7DG333400
rosa_wichuraiana	Rw2G025710 Rw6G017340 Rw7G028730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	882
AatII	GACGTC	1 cut(s)	1183
AccBSI	CCGCTC	1 cut(s)	92
AciI	CCGC	1 cut(s)	90
AclWI	GGATC	5 cut(s)	54, 67, 223, 568, 634
AcoI	YGGCCR	1 cut(s)	1132
AcsI	RAATTY	1 cut(s)	611
AcvI	CACGTG	1 cut(s)	314
AcyI	GRCGYC	1 cut(s)	1180
AdeI	CACNNNGTG	2 cut(s)	314, 339
AfaI	GTAC	2 cut(s)	422, 1172
AfiI	CCNNNNNNNGG	4 cut(s)	56, 511, 962, 977
AgsI	TTSAA	4 cut(s)	13, 464, 547, 611
AhdI	GACNNNNNGTC	1 cut(s)	1077
AjiI	CACGTC	1 cut(s)	240
AjnI	CCWGG	4 cut(s)	211, 576, 794, 827
AleI	CACNNNNGTG	1 cut(s)	978
AluBI	AGCT	5 cut(s)	151, 223, 624, 886, 1102
AluI	AGCT	5 cut(s)	151, 223, 624, 886, 1102
Alw21I	GWGCWC	1 cut(s)	48
Alw26I	GTCTC	4 cut(s)	33, 230, 817, 1187
AlwI	GGATC	5 cut(s)	54, 67, 223, 568, 634
AlwNI	CAGNNNCTG	1 cut(s)	352
Ama87I	CYCGRG	1 cut(s)	1088
AoxI	GGCC	4 cut(s)	174, 316, 792, 1132
ApoI	RAATTY	1 cut(s)	611
Asp700I	GAANNNNTTC	2 cut(s)	116, 410
AspS9I	GGNCC	3 cut(s)	792, 936, 1025
AsuC2I	CCSGG	3 cut(s)	178, 506, 742
AsuHPI	GGTGA	3 cut(s)	376, 592, 997
AvaI	CYCGRG	1 cut(s)	1088
AvaII	GGWCC	2 cut(s)	936, 1025
BalI	TGGCCA	1 cut(s)	1134
BamHI	GGATCC	1 cut(s)	59
BanII	GRGCYC	1 cut(s)	346
BarI	GAAGNNNNNNTAC	2 cut(s)	980, 1012
BbrPI	CACGTG	1 cut(s)	314
BbsI	GAAGAC	1 cut(s)	311
Bbv12I	GWGCWC	1 cut(s)	48
BccI	CCATC	1 cut(s)	142
BcgI	CGANNNNNNTGC	2 cut(s)	1058, 1092
BciT130I	CCWGG	4 cut(s)	213, 578, 796, 829
BciVI	GTATCC	1 cut(s)	839
BclI	TGATCA	1 cut(s)	1005
BcnI	CCSGG	3 cut(s)	178, 506, 742
BcoDI	GTCTC	4 cut(s)	33, 230, 817, 1187
BfaI	CTAG	1 cut(s)	807
BfuI	GTATCC	1 cut(s)	839
BisI	GCNGC	1 cut(s)	90
BlpI	GCTNAGC	1 cut(s)	345
BlsI	GCNGC	1 cut(s)	91
BmcAI	AGTACT	2 cut(s)	422, 1172
Bme1390I	CCNGG	7 cut(s)	178, 213, 506, 578, 742, 796, 829
Bme18I	GGWCC	2 cut(s)	936, 1025
BmeRI	GACNNNNNGTC	1 cut(s)	1077
BmeT110I	CYCGRG	1 cut(s)	1088
BmgBI	CACGTC	1 cut(s)	240
BmgT120I	GGNCC	3 cut(s)	792, 936, 1025
BmiI	GGNNCC	4 cut(s)	61, 267, 592, 793
BmrFI	CCNGG	7 cut(s)	178, 213, 506, 578, 742, 796, 829
BmrI	ACTGGG	1 cut(s)	463
BmsI	GCATC	4 cut(s)	358, 640, 808, 1004
BmuI	ACTGGG	1 cut(s)	463
BpiI	GAAGAC	1 cut(s)	311
Bpu1102I	GCTNAGC	1 cut(s)	345
BpuEI	CTTGAG	3 cut(s)	1049, 1088, 1169
BpuMI	CCSGG	3 cut(s)	178, 506, 742
Bsa29I	ATCGAT	1 cut(s)	1113
BsaAI	YACGTR	1 cut(s)	314
BsaBI	GATNNNNATC	1 cut(s)	680
BsaHI	GRCGYC	1 cut(s)	1180
BsaJI	CCNNGG	7 cut(s)	64, 77, 123, 163, 273, 828, 1135
BsaWI	WCCGGW	1 cut(s)	855
Bsc4I	CCNNNNNNNGG	4 cut(s)	56, 511, 962, 977
Bse1I	ACTGG	3 cut(s)	392, 469, 1054
Bse3DI	GCAATG	1 cut(s)	594
Bse8I	GATNNNNATC	1 cut(s)	680
BseBI	CCWGG	4 cut(s)	213, 578, 796, 829
BseCI	ATCGAT	1 cut(s)	1113
BseDI	CCNNGG	7 cut(s)	64, 77, 123, 163, 273, 828, 1135
BseGI	GGATG	8 cut(s)	133, 134, 186, 501, 673, 799, 997, 1019
BseJI	GATNNNNATC	1 cut(s)	680
BseLI	CCNNNNNNNGG	4 cut(s)	56, 511, 962, 977
BseMI	GCAATG	1 cut(s)	594
BseMII	CTCAG	6 cut(s)	344, 359, 536, 761, 852, 915
BseNI	ACTGG	3 cut(s)	392, 469, 1054
BseRI	GAGGAG	6 cut(s)	31, 258, 374, 385, 458, 1111
BseYI	CCCAGC	1 cut(s)	896
BshFI	GGCC	4 cut(s)	176, 318, 794, 1134
BshVI	ATCGAT	1 cut(s)	1113
BsiHKAI	GWGCWC	1 cut(s)	48
BsiHKCI	CYCGRG	1 cut(s)	1088
BsiSI	CCGG	4 cut(s)	177, 505, 742, 856
BslFI	GGGAC	1 cut(s)	1042
BslI	CCNNNNNNNGG	4 cut(s)	56, 511, 962, 977
BsmAI	GTCTC	4 cut(s)	33, 230, 817, 1187
BsmBI	CGTCTC	2 cut(s)	230, 1187
BsmFI	GGGAC	1 cut(s)	1042
BsmI	GAATGC	1 cut(s)	116
BsnI	GGCC	4 cut(s)	176, 318, 794, 1134
BsoBI	CYCGRG	1 cut(s)	1088
Bsp1286I	GDGCHC	2 cut(s)	48, 346
Bsp143I	GATC	5 cut(s)	59, 215, 573, 639, 1005
Bsp1720I	GCTNAGC	1 cut(s)	345
Bsp19I	CCATGG	2 cut(s)	273, 1135
BspACI	CCGC	1 cut(s)	90
BspANI	GGCC	4 cut(s)	176, 318, 794, 1134
BspCNI	CTCAG	6 cut(s)	345, 358, 535, 762, 853, 916
BspDI	ATCGAT	1 cut(s)	1113
BspLI	GGNNCC	4 cut(s)	61, 267, 592, 793
BspPI	GGATC	5 cut(s)	54, 67, 223, 568, 634
BsrBI	CCGCTC	1 cut(s)	92
BsrDI	GCAATG	1 cut(s)	594
BsrI	ACTGG	3 cut(s)	392, 469, 1054
BssECI	CCNNGG	7 cut(s)	64, 77, 123, 163, 273, 828, 1135
BssMI	GATC	5 cut(s)	59, 215, 573, 639, 1005
BssNI	GRCGYC	1 cut(s)	1180
BssT1I	CCWWGG	6 cut(s)	64, 77, 123, 163, 273, 1135
Bst2UI	CCWGG	4 cut(s)	213, 578, 796, 829
Bst4CI	ACNGT	3 cut(s)	337, 499, 823
Bst6I	CTCTTC	5 cut(s)	8, 362, 449, 1028, 1053
BstACI	GRCGYC	1 cut(s)	1180
BstBAI	YACGTR	1 cut(s)	314
BstC8I	GCNNGC	2 cut(s)	87, 149
BstDEI	CTNAG	7 cut(s)	345, 353, 522, 770, 861, 924, 1029
BstDSI	CCRYGG	2 cut(s)	273, 1135
BstF5I	GGATG	8 cut(s)	133, 134, 186, 501, 673, 799, 997, 1019
BstKTI	GATC	5 cut(s)	62, 218, 576, 642, 1008
BstMAI	GTCTC	4 cut(s)	33, 230, 817, 1187
BstMBI	GATC	5 cut(s)	59, 215, 573, 639, 1005
BstMWI	GCNNNNNNNGC	1 cut(s)	1140
BstNI	CCWGG	4 cut(s)	213, 578, 796, 829
BstSCI	CCNGG	7 cut(s)	176, 211, 504, 576, 740, 794, 827
BstV2I	GAAGAC	1 cut(s)	311
BstX2I	RGATCY	3 cut(s)	59, 573, 639
BstXI	CCANNNNNNTGG	1 cut(s)	584
BstYI	RGATCY	3 cut(s)	59, 573, 639
Bsu15I	ATCGAT	1 cut(s)	1113
BsuI	GTATCC	1 cut(s)	839
BsuRI	GGCC	4 cut(s)	176, 318, 794, 1134
BsuTUI	ATCGAT	1 cut(s)	1113
BtgI	CCRYGG	2 cut(s)	273, 1135
BtrI	CACGTC	1 cut(s)	240
BtsCI	GGATG	8 cut(s)	133, 134, 186, 501, 673, 799, 997, 1019
BtsI	GCAGTG	1 cut(s)	912
BtsIMutI	CAGTG	3 cut(s)	342, 912, 921
Cac8I	GCNNGC	2 cut(s)	87, 149
CaiI	CAGNNNCTG	1 cut(s)	352
Cfr13I	GGNCC	3 cut(s)	792, 936, 1025
ClaI	ATCGAT	1 cut(s)	1113
Csp6I	GTAC	2 cut(s)	421, 1171
CviAII	CATG	3 cut(s)	56, 274, 1136
CviQI	GTAC	2 cut(s)	421, 1171
DdeI	CTNAG	7 cut(s)	345, 353, 522, 770, 861, 924, 1029
DpnI	GATC	5 cut(s)	61, 217, 575, 641, 1007
DpnII	GATC	5 cut(s)	59, 215, 573, 639, 1005
DraIII	CACNNNGTG	2 cut(s)	314, 339
DriI	GACNNNNNGTC	1 cut(s)	1077
EaeI	YGGCCR	1 cut(s)	1132
Eam1104I	CTCTTC	5 cut(s)	8, 362, 449, 1028, 1053
Eam1105I	GACNNNNNGTC	1 cut(s)	1077
EarI	CTCTTC	5 cut(s)	8, 362, 449, 1028, 1053
Eco130I	CCWWGG	6 cut(s)	64, 77, 123, 163, 273, 1135
Eco24I	GRGCYC	1 cut(s)	346
Eco32I	GATATC	1 cut(s)	1096
Eco47I	GGWCC	2 cut(s)	936, 1025
Eco72I	CACGTG	1 cut(s)	314
Eco88I	CYCGRG	1 cut(s)	1088
EcoO109I	RGGNCCY	1 cut(s)	792
EcoRII	CCWGG	4 cut(s)	211, 576, 794, 827
EcoRV	GATATC	1 cut(s)	1096
EcoT14I	CCWWGG	6 cut(s)	64, 77, 123, 163, 273, 1135
EcoT38I	GRGCYC	1 cut(s)	346
ErhI	CCWWGG	6 cut(s)	64, 77, 123, 163, 273, 1135
Esp3I	CGTCTC	2 cut(s)	230, 1187
FaeI	CATG	3 cut(s)	59, 277, 1139
FalI	AAGNNNNNCTT	2 cut(s)	549, 581
FaqI	GGGAC	1 cut(s)	1042
FatI	CATG	3 cut(s)	55, 273, 1135
FbaI	TGATCA	1 cut(s)	1005
Fnu4HI	GCNGC	1 cut(s)	90
FokI	GGATG	8 cut(s)	121, 140, 193, 488, 680, 786, 1004, 1026
FriOI	GRGCYC	1 cut(s)	346
Fsp4HI	GCNGC	1 cut(s)	90
FspBI	CTAG	1 cut(s)	807
GluI	GCNGC	1 cut(s)	90
GsaI	CCCAGC	1 cut(s)	900
HaeIII	GGCC	4 cut(s)	176, 318, 794, 1134
HapII	CCGG	4 cut(s)	177, 505, 742, 856
Hin1I	GRCGYC	1 cut(s)	1180
Hin1II	CATG	3 cut(s)	59, 277, 1139
HindIII	AAGCTT	2 cut(s)	221, 622
HinfI	GANTC	5 cut(s)	184, 464, 757, 810, 905
HpaII	CCGG	4 cut(s)	177, 505, 742, 856
HphI	GGTGA	3 cut(s)	376, 592, 997
Hpy188I	TCNGA	8 cut(s)	197, 330, 354, 525, 771, 840, 890, 1005
Hpy188III	TCNNGA	3 cut(s)	661, 1088, 1147
HpyCH4III	ACNGT	3 cut(s)	337, 499, 823
HpyCH4IV	ACGT	3 cut(s)	239, 313, 1180
HpyCH4V	TGCA	2 cut(s)	147, 393
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1140
HpyF3I	CTNAG	7 cut(s)	345, 353, 522, 770, 861, 924, 1029
HpySE526I	ACGT	3 cut(s)	239, 313, 1180
Hsp92I	GRCGYC	1 cut(s)	1180
Hsp92II	CATG	3 cut(s)	59, 277, 1139
Ksp22I	TGATCA	1 cut(s)	1005
Kzo9I	GATC	5 cut(s)	59, 215, 573, 639, 1005
LmnI	GCTCC	1 cut(s)	271
LweI	GCATC	4 cut(s)	358, 640, 808, 1004
MaeI	CTAG	1 cut(s)	807
MaeII	ACGT	3 cut(s)	239, 313, 1180
MaeIII	GTNAC	9 cut(s)	95, 167, 250, 691, 721, 736, 906, 919, 1042
MalI	GATC	5 cut(s)	61, 217, 575, 641, 1007
MbiI	CCGCTC	1 cut(s)	92
MboI	GATC	5 cut(s)	59, 215, 573, 639, 1005
MflI	RGATCY	3 cut(s)	59, 573, 639
MhlI	GDGCHC	2 cut(s)	48, 346
MlsI	TGGCCA	1 cut(s)	1134
MluCI	AATT	1 cut(s)	611
MluNI	TGGCCA	1 cut(s)	1134
MlyI	GAGTC	4 cut(s)	178, 751, 819, 914
MmeI	TCCRAC	2 cut(s)	265, 1003
Mox20I	TGGCCA	1 cut(s)	1134
MroXI	GAANNNNTTC	2 cut(s)	116, 410
MscI	TGGCCA	1 cut(s)	1134
MslI	CAYNNNNRTG	3 cut(s)	354, 506, 978
Msp20I	TGGCCA	1 cut(s)	1134
MspI	CCGG	4 cut(s)	177, 505, 742, 856
MspR9I	CCNGG	7 cut(s)	178, 213, 506, 578, 742, 796, 829
Mva1269I	GAATGC	1 cut(s)	116
MvaI	CCWGG	4 cut(s)	213, 578, 796, 829
MwoI	GCNNNNNNNGC	1 cut(s)	1140
NciI	CCSGG	3 cut(s)	178, 506, 742
NcoI	CCATGG	2 cut(s)	273, 1135
NdeII	GATC	5 cut(s)	59, 215, 573, 639, 1005
NlaIII	CATG	3 cut(s)	59, 277, 1139
NlaIV	GGNNCC	4 cut(s)	61, 267, 592, 793
NmuCI	GTSAC	5 cut(s)	95, 691, 906, 919, 1042
OliI	CACNNNNGTG	1 cut(s)	978
PaeR7I	CTCGAG	1 cut(s)	1088
PcsI	WCGNNNNNNNCGW	1 cut(s)	319
PctI	GAATGC	1 cut(s)	116
PdmI	GAANNNNTTC	2 cut(s)	116, 410
PfeI	GAWTC	1 cut(s)	464
PkrI	GCNGC	1 cut(s)	91
PleI	GAGTC	4 cut(s)	178, 751, 818, 913
PmaCI	CACGTG	1 cut(s)	314
PmlI	CACGTG	1 cut(s)	314
PpsI	GAGTC	4 cut(s)	178, 751, 818, 913
Ppu21I	YACGTR	1 cut(s)	314
PsiI	TTATAA	1 cut(s)	882
Psp6I	CCWGG	4 cut(s)	211, 576, 794, 827
PspCI	CACGTG	1 cut(s)	314
PspFI	CCCAGC	1 cut(s)	896
PspGI	CCWGG	4 cut(s)	211, 576, 794, 827
PspN4I	GGNNCC	4 cut(s)	61, 267, 592, 793
PspPI	GGNCC	3 cut(s)	792, 936, 1025
PstNI	CAGNNNCTG	1 cut(s)	352
PsuI	RGATCY	3 cut(s)	59, 573, 639
RsaI	GTAC	2 cut(s)	422, 1172
RsaNI	GTAC	2 cut(s)	421, 1171
RseI	CAYNNNNRTG	3 cut(s)	354, 506, 978
SatI	GCNGC	1 cut(s)	90
Sau3AI	GATC	5 cut(s)	59, 215, 573, 639, 1005
Sau96I	GGNCC	3 cut(s)	792, 936, 1025
ScaI	AGTACT	2 cut(s)	422, 1172
SchI	GAGTC	4 cut(s)	178, 751, 819, 914
ScrFI	CCNGG	7 cut(s)	178, 213, 506, 578, 742, 796, 829
SduI	GDGCHC	2 cut(s)	48, 346
SfaNI	GCATC	4 cut(s)	358, 640, 808, 1004
Sfr274I	CTCGAG	1 cut(s)	1088
SinI	GGWCC	2 cut(s)	936, 1025
SlaI	CTCGAG	1 cut(s)	1088
SmiMI	CAYNNNNRTG	3 cut(s)	354, 506, 978
SmlI	CTYRAG	4 cut(s)	1064, 1088, 1103, 1184
SmoI	CTYRAG	4 cut(s)	1064, 1088, 1103, 1184
Sse9I	AATT	1 cut(s)	611
SsiI	CCGC	1 cut(s)	90
SspMI	CTAG	1 cut(s)	807
StyD4I	CCNGG	7 cut(s)	176, 211, 504, 576, 740, 794, 827
StyI	CCWWGG	6 cut(s)	64, 77, 123, 163, 273, 1135
TaaI	ACNGT	3 cut(s)	337, 499, 823
TaiI	ACGT	3 cut(s)	242, 316, 1183
TaqI	TCGA	2 cut(s)	1089, 1113
TaqII	GACCGA	1 cut(s)	953
TasI	AATT	1 cut(s)	611
TatI	WGTACW	2 cut(s)	420, 1170
TauI	GCSGC	1 cut(s)	92
TfiI	GAWTC	1 cut(s)	464
TscAI	CASTG	3 cut(s)	342, 919, 928
TseFI	GTSAC	5 cut(s)	95, 691, 906, 919, 1042
Tsp45I	GTSAC	5 cut(s)	95, 691, 906, 919, 1042
TspDTI	ATGAA	6 cut(s)	450, 551, 684, 726, 881, 1099
TspGWI	ACGGA	1 cut(s)	1191
TspRI	CASTG	3 cut(s)	342, 919, 928
VpaK11BI	GGWCC	2 cut(s)	936, 1025
XapI	RAATTY	1 cut(s)	611
XhoI	CTCGAG	1 cut(s)	1088
XmnI	GAANNNNTTC	2 cut(s)	116, 410
XspI	CTAG	1 cut(s)	807
ZraI	GACGTC	1 cut(s)	1181
ZrmI	AGTACT	2 cut(s)	422, 1172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.