Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001100

Physical Location & Seq

Genomic Coordinates Reverse (-)

27273425 .. 27275536

Gene Structure 2112 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0259500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGCCGAATTTGAAACGCTGCAAGCTGAAAGAGGCCGCGAATCCGAAGAGACGGAAAACGAATGGGGGGTATTACTCAGTCGAAGATTTCAGCAGCGGCTCCAGTTCTCCGGAATATGACGAGTCGTTTTCTGCTGCCGTCGAGGTCAACCGGCCAGCAATGAATCAGATCAACCCTGACAAGTTTCGGAGGACAGCTCGAGGTCGCGCGCAAGTGCCGTCTTCAGTTGATTTATATGAAAAAAAGCAAGCTAAAGCTATGAAAATAGTGAAGGGCTCAGGTTCTGAAACCCAAGTTTTATGTAAACATTGTGCAAAGTTGAAAAAATCAAAACAACATTGTGGCATATGTAAGAAGATAGGGCAATATTCAAATGGTGGAGATTGGGTGCATGCTGACTTTTCCAGTGAAGTTTTCAAGGATCTGGAGCACAATGATTGCAAAAATAAGGAATGTGAATCGTCAGATGTGACCGGCGTAACTGTGGTTTGTAATGGCATGGAAGGAACATATGTACCAAACCTTCATATGGTTGCTTGTAAGTGTGGACTGTGTGATGAGTCAAAGATGCGGAGCCTTGGTGAATGGGAAAGGCACACAGGTTGTAGAGCAAAAAAATGGAAGCATAGTGTGAAAGTGAAGGCCACAATGCTAACACTGGAACAATGGATTGCACAGTATAATGAACTTGGTTTAGATAAGCAGCAACTACTTGATTCCTTACGAGAAAAGTACGAGCCAGTTGATGCAAAGTGGACAAGTGAAAGATGCGCAGTTTGTAGATGGGTTGAAGATTGGGAAGATAACAAAATGATCATATGCAACAGGTGTCAAATAGCCGTGCACCAGGAATGCTATGGTGCAAAACATGTCCAGGATTTTACTTCATGGGTTTGTAGGGCATGTGAAACACCTGATATCGTTAGAGAGTGTTGTCTCTGTCCTGTAAAAGGAGGTGCTTTGAAGCCTACTGATGTTGACACCTTGTGGGTTCATGTCTCTTGTGCTTGGTTTCATCCCGAAATAGGTTTCTTGAATCATGAGAAGATGGAACCTGCTGTTGGAATCCTTAGAATCCCACCCACTACTTTTCTGAAGCGTTGTGTAATTTGTGCGCAGACTCATGGTTCCTGCACCACATGTTGCAAATGTGCCACTCATTTTCATGCAACCTGTGCATCAAGAGCAGGCTACAGCATGGAGTTGCACTGCCAGGTGGGGAAGAATGGGAAACAAGTAACAACCAAGTTGATATATTGTGCGGTGCACAGGACTCCCAATCCAGAAGCTGTTATCGTTGTTCATACTCCTTCAGGGGTTTTTGCTGCCAGAAGCTTGCTTCGGAAAGAGAAAGGGTTCTTCAGGGGTTCGAGGGTGGTGTCATCAAAGAAAAATGAAGTTTCAGAACCTTCAACCTCAGAGTCTTATGAGTTAGAACCAGTACTCTCTGCTGCAAGATGCCGTGCTATTAAAAGATCAAATTTTAAGGGAGGTGAGCGGCTGCCAATTTTTCATCGACCAAGGGGACCAACACACCATTCATTAGACGAAGTAAATAGCTTGAGCACATTTAAAGAAGTAGAAGATTCTAAAATTTTTTCTTCCTTCAAGGATCGGCTTCACCACTTGCAGAAAACTGAAAATCACCGGGTTTGTTTTGGTAAATCTGGAATACATGGATGGGGTCTATTTGCACGTAGGAGTATTCAAGAAGGAGATATGGTAGTTGAGTATCGTGGTGAGCGGGTAAGACGCAGCATTGCAGATCTGAGGGAAGCACGGTACAGGCAACAAGGCAAAGATTGCTATCTTTTCAAGATCAGCGAGGAAGTAGTAATTGATGCTACATGTAAAGGAAATATAGCACGGTTAATTAACCATTCGTGCATGCCTAATTGCTATTCAAGGATCGTGAGTGTGGGTGAGGAGAACCGAATAGTTCTCATTGCCAAAACTAATGTTTCGGCTGGTGAAGAACTAACGTACGATTACTTGTTTGAGCCGGATGAATGTGACGAGCTGAGAGTTCCCTGTCTATGTAAAGCTCCCAACTGTAGGAAATTCTTATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022625 GO:0022626 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L3

Protein Analysis

690

Amino Acids

78.0

Weight (kDa)

8.8

Isoelectric Point (pI)

39.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_2	PF13831	269 - 303	2.7e-12	PHD-finger
zf-HC5HC2H_2	PF13832	310 - 423	1.4e-25	PHD-zinc-finger like domain
zf-HC5HC2H	PF13771	332 - 424	1.7e-10	PHD-like zinc-binding domain
SET	PF00856	560 - 664	1.3e-26	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G61580
fragaria_vesca	FvH4_2g13300 FvH4_2g13300 FvH4_2g13300 FvH4_6g25400 FvH4_6g25400 FvH4_6g25400 FvH4_6g25400
malus_domestica	MD04G1044600.v1.1 MD08G1242000.v1.1 MD15G1435700.v1.1
prunus_persica	Prupe.1G579300_v2.0.a1 Prupe.1G579300_v2.0.a1 Prupe.8G036200_v2.0.a1 Prupe.8G036200_v2.0.a1
pyrus_communis	pycom15g38440
rosa_chinensis	RchiOBHm_Chr2g0125851 RchiOBHm_Chr6g0274741 RchiOBHm_Chr7g0220671
rosa_laevigata	RLG00000002211
rosa_multiflora	Rmu_co8485815.1_g000001 Rmu_sc0006216.1_g000001 Rmu_sc0006223.1_g000009 Rmu_sc0013532.1_g000002 Rmu_ssc0000189.1_g000006
rosa_roxburghii	Rroxscaffold_2G00117610 Rroxscaffold_2G00117670 Rroxscaffold_3G00239250 Rroxscaffold_7G00193980
rosa_rugosa	Rorug02G0259500 Rorug02G0259600 Rorug02G0259700 Rorug02G0259800 Rorug02G0259900 Rorug06G0083600 Rorug07G0195800 Rorug07G0195900 Rorug07G0196000.1 Rorug07G0196100
rosa_samantha	Rh2CG307400 Rh6AG199400 Rh6BG203200 Rh6CG203400 Rh7AG336800 Rh7BG327700 Rh7CG354800 Rh7DG333400
rosa_wichuraiana	Rw2G025710 Rw6G017340 Rw7G028730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	772, 1116
Acc36I	ACCTGC	1 cut(s)	1063
AccBSI	CCGCTC	2 cut(s)	1498, 1744
AccII	CGCG	3 cut(s)	38, 207, 209
AccIII	TCCGGA	1 cut(s)	109
AciI	CCGC	6 cut(s)	36, 96, 571, 1262, 1498, 1744
AclWI	GGATC	3 cut(s)	429, 1620, 1916
AcoI	YGGCCR	1 cut(s)	152
AcsI	RAATTY	4 cut(s)	7, 1480, 1593, 2060
AcuI	CTGAAG	4 cut(s)	207, 1115, 1296, 1345
AdeI	CACNNNGTG	1 cut(s)	987
AfaI	GTAC	5 cut(s)	516, 734, 1443, 1784, 1985
AfiI	CCNNNNNNNGG	5 cut(s)	529, 950, 1025, 1061, 2055
AflIII	ACRYGT	3 cut(s)	868, 1139, 1847
AjnI	CCWGG	3 cut(s)	846, 873, 1212
AjuI	GAANNNNNNNTTGG	4 cut(s)	1044, 1076, 1522, 1554
AluBI	AGCT	9 cut(s)	25, 197, 251, 257, 1289, 1335, 1560, 2020, 2045
AluI	AGCT	9 cut(s)	25, 197, 251, 257, 1289, 1335, 1560, 2020, 2045
Alw21I	GWGCWC	4 cut(s)	432, 846, 1269, 1568
Alw26I	GTCTC	3 cut(s)	43, 941, 1003
Alw44I	GTGCAC	2 cut(s)	842, 1265
AlwI	GGATC	3 cut(s)	429, 1620, 1916
AlwNI	CAGNNNCTG	2 cut(s)	284, 1289
Ama87I	CYCGRG	1 cut(s)	198
Aor13HI	TCCGGA	1 cut(s)	109
AoxI	GGCC	3 cut(s)	33, 152, 642
ApaLI	GTGCAC	2 cut(s)	842, 1265
ApeKI	GCWGC	8 cut(s)	18, 93, 134, 703, 1325, 1451, 1501, 1755
ApoI	RAATTY	4 cut(s)	7, 1480, 1593, 2060
Asp700I	GAANNNNTTC	1 cut(s)	1355
AspLEI	GCGC	4 cut(s)	209, 211, 773, 1117
AspS9I	GGNCC	1 cut(s)	1526
AsuC2I	CCSGG	1 cut(s)	1649
AsuHPI	GGTGA	7 cut(s)	593, 1505, 1613, 1637, 1751, 1934, 1982
AvaI	CYCGRG	1 cut(s)	198
AvaII	GGWCC	1 cut(s)	1526
BaeGI	GKGCMC	2 cut(s)	846, 1269
BaeI	ACNNNNGTAYC	2 cut(s)	498, 531
BanII	GRGCYC	1 cut(s)	278
BarI	GAAGNNNNNNTAC	2 cut(s)	507, 539
BbsI	GAAGAC	1 cut(s)	213
Bbv12I	GWGCWC	4 cut(s)	432, 846, 1269, 1568
BbvI	GCAGC	8 cut(s)	5, 105, 121, 715, 1312, 1438, 1488, 1767
BccI	CCATC	3 cut(s)	777, 1042, 1674
BceAI	ACGGC	4 cut(s)	122, 202, 824, 1446
BciT130I	CCWGG	3 cut(s)	848, 875, 1214
BclI	TGATCA	1 cut(s)	813
BcnI	CCSGG	1 cut(s)	1649
BcoDI	GTCTC	3 cut(s)	43, 941, 1003
BfmI	CTRYAG	2 cut(s)	1192, 2053
BfuAI	ACCTGC	1 cut(s)	1063
BglII	AGATCT	1 cut(s)	1765
BmcAI	AGTACT	1 cut(s)	1443
Bme1390I	CCNGG	4 cut(s)	848, 875, 1214, 1649
Bme18I	GGWCC	1 cut(s)	1526
BmeT110I	CYCGRG	1 cut(s)	198
BmgT120I	GGNCC	1 cut(s)	1526
BmiI	GGNNCC	5 cut(s)	100, 575, 1053, 1129, 1527
BmrFI	CCNGG	4 cut(s)	848, 875, 1214, 1649
BmsI	GCATC	6 cut(s)	558, 736, 758, 1187, 1448, 1831
BpiI	GAAGAC	1 cut(s)	213
BplI	GAGNNNNNCTC	2 cut(s)	181, 213
BpmI	CTGGAG	2 cut(s)	85, 446
Bpu10I	CCTNAGC	1 cut(s)	277
BpuEI	CTTGAG	1 cut(s)	1582
BpuMI	CCSGG	1 cut(s)	1649
BsaAI	YACGTR	1 cut(s)	1697
BsaBI	GATNNNNATC	1 cut(s)	1806
BsaJI	CCNNGG	2 cut(s)	577, 1520
BsaWI	WCCGGW	1 cut(s)	109
BsaXI	ACNNNNNCTCC	6 cut(s)	372, 402, 565, 595, 1707, 1737
Bsc4I	CCNNNNNNNGG	5 cut(s)	529, 950, 1025, 1061, 2055
Bse118I	RCCGGY	2 cut(s)	150, 473
Bse1I	ACTGG	5 cut(s)	102, 405, 663, 740, 1439
Bse3DI	GCAATG	3 cut(s)	165, 1758, 1944
Bse8I	GATNNNNATC	1 cut(s)	1806
BseAI	TCCGGA	1 cut(s)	109
BseBI	CCWGG	3 cut(s)	848, 875, 1214
BseDI	CCNNGG	2 cut(s)	577, 1520
BseGI	GGATG	3 cut(s)	1015, 1685, 2011
BseJI	GATNNNNATC	1 cut(s)	1806
BseLI	CCNNNNNNNGG	5 cut(s)	529, 950, 1025, 1061, 2055
BseMI	GCAATG	3 cut(s)	165, 1758, 1944
BseMII	CTCAG	5 cut(s)	90, 291, 1431, 1760, 2012
BseNI	ACTGG	5 cut(s)	102, 405, 663, 740, 1439
BsePI	GCGCGC	1 cut(s)	207
BseRI	GAGGAG	1 cut(s)	1940
BseSI	GKGCMC	2 cut(s)	846, 1269
BseXI	GCAGC	8 cut(s)	5, 105, 121, 715, 1312, 1438, 1488, 1767
BsgI	GTGCAG	1 cut(s)	1117
Bsh1236I	CGCG	3 cut(s)	38, 207, 209
BshFI	GGCC	3 cut(s)	35, 154, 644
BsiHKAI	GWGCWC	4 cut(s)	432, 846, 1269, 1568
BsiHKCI	CYCGRG	1 cut(s)	198
BsiSI	CCGG	5 cut(s)	110, 151, 474, 1648, 2003
BsiWI	CGTACG	1 cut(s)	1983
BslFI	GGGAC	1 cut(s)	1539
BslI	CCNNNNNNNGG	5 cut(s)	529, 950, 1025, 1061, 2055
BsmAI	GTCTC	3 cut(s)	43, 941, 1003
BsmBI	CGTCTC	1 cut(s)	43
BsmFI	GGGAC	1 cut(s)	1539
BsmI	GAATGC	1 cut(s)	857
BsnI	GGCC	3 cut(s)	35, 154, 644
BsoBI	CYCGRG	1 cut(s)	198
Bsp1286I	GDGCHC	5 cut(s)	278, 432, 846, 1269, 1568
Bsp13I	TCCGGA	1 cut(s)	109
Bsp143I	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
BspACI	CCGC	6 cut(s)	36, 96, 571, 1262, 1498, 1744
BspANI	GGCC	3 cut(s)	35, 154, 644
BspCNI	CTCAG	5 cut(s)	89, 290, 1430, 1761, 2013
BspEI	TCCGGA	1 cut(s)	109
BspFNI	CGCG	3 cut(s)	38, 207, 209
BspHI	TCATGA	1 cut(s)	1039
BspLI	GGNNCC	5 cut(s)	100, 575, 1053, 1129, 1527
BspMI	ACCTGC	1 cut(s)	1063
BspPI	GGATC	3 cut(s)	429, 1620, 1916
BsrBI	CCGCTC	2 cut(s)	1498, 1744
BsrDI	GCAATG	3 cut(s)	165, 1758, 1944
BsrFI	RCCGGY	2 cut(s)	150, 473
BsrI	ACTGG	5 cut(s)	102, 405, 663, 740, 1439
BssAI	RCCGGY	2 cut(s)	150, 473
BssECI	CCNNGG	2 cut(s)	577, 1520
BssHII	GCGCGC	1 cut(s)	207
BssMI	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
BssT1I	CCWWGG	2 cut(s)	577, 1520
Bst2UI	CCWGG	3 cut(s)	848, 875, 1214
Bst4CI	ACNGT	6 cut(s)	484, 552, 678, 1782, 1869, 2054
Bst6I	CTCTTC	1 cut(s)	41
BstAPI	GCANNNNNTGC	2 cut(s)	1175, 1803
BstBAI	YACGTR	1 cut(s)	1697
BstC8I	GCNNGC	8 cut(s)	23, 156, 209, 249, 393, 1189, 1337, 1889
BstDEI	CTNAG	6 cut(s)	76, 277, 1070, 1417, 1769, 2021
BstENI	CCTNNNNNAGG	1 cut(s)	948
BstF5I	GGATG	3 cut(s)	1015, 1685, 2011
BstFNI	CGCG	3 cut(s)	38, 207, 209
BstHHI	GCGC	4 cut(s)	209, 211, 773, 1117
BstKTI	GATC	8 cut(s)	171, 424, 816, 1478, 1615, 1768, 1821, 1911
BstMAI	GTCTC	3 cut(s)	43, 941, 1003
BstMBI	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
BstMWI	GCNNNNNNNGC	3 cut(s)	1175, 1184, 1803
BstNI	CCWGG	3 cut(s)	848, 875, 1214
BstNSI	RCATGY	6 cut(s)	395, 872, 906, 1143, 1851, 1891
BstSCI	CCNGG	4 cut(s)	846, 873, 1212, 1647
BstSFI	CTRYAG	2 cut(s)	1192, 2053
BstSLI	GKGCMC	2 cut(s)	846, 1269
BstUI	CGCG	3 cut(s)	38, 207, 209
BstV1I	GCAGC	8 cut(s)	5, 105, 121, 715, 1312, 1438, 1488, 1767
BstV2I	GAAGAC	1 cut(s)	213
BstX2I	RGATCY	2 cut(s)	421, 1765
BstYI	RGATCY	2 cut(s)	421, 1765
BsuRI	GGCC	3 cut(s)	35, 154, 644
BtsCI	GGATG	3 cut(s)	1015, 1685, 2011
BtsI	GCAGTG	1 cut(s)	1207
BtsIMutI	CAGTG	3 cut(s)	412, 656, 1207
BveI	ACCTGC	1 cut(s)	1063
Cac8I	GCNNGC	8 cut(s)	23, 156, 209, 249, 393, 1189, 1337, 1889
CaiI	CAGNNNCTG	2 cut(s)	284, 1289
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	4 cut(s)	209, 211, 773, 1117
Cfr10I	RCCGGY	2 cut(s)	150, 473
Cfr13I	GGNCC	1 cut(s)	1526
CseI	GACGC	1 cut(s)	1761
Csp6I	GTAC	5 cut(s)	515, 733, 1442, 1783, 1984
CviQI	GTAC	5 cut(s)	515, 733, 1442, 1783, 1984
DdeI	CTNAG	6 cut(s)	76, 277, 1070, 1417, 1769, 2021
DpnI	GATC	8 cut(s)	170, 423, 815, 1477, 1614, 1767, 1820, 1910
DpnII	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
DraI	TTTAAA	1 cut(s)	1573
DraIII	CACNNNGTG	1 cut(s)	987
EaeI	YGGCCR	1 cut(s)	152
Eam1104I	CTCTTC	1 cut(s)	41
EarI	CTCTTC	1 cut(s)	41
Eco130I	CCWWGG	2 cut(s)	577, 1520
Eco24I	GRGCYC	1 cut(s)	278
Eco32I	GATATC	1 cut(s)	919
Eco47I	GGWCC	1 cut(s)	1526
Eco57I	CTGAAG	4 cut(s)	207, 1115, 1296, 1345
Eco88I	CYCGRG	1 cut(s)	198
EcoNI	CCTNNNNNAGG	1 cut(s)	948
EcoRII	CCWGG	3 cut(s)	846, 873, 1212
EcoRV	GATATC	1 cut(s)	919
EcoT14I	CCWWGG	2 cut(s)	577, 1520
EcoT38I	GRGCYC	1 cut(s)	278
ErhI	CCWWGG	2 cut(s)	577, 1520
Esp3I	CGTCTC	1 cut(s)	43
FaqI	GGGAC	1 cut(s)	1539
FauI	CCCGC	1 cut(s)	1737
FauNDI	CATATG	4 cut(s)	347, 511, 528, 818
FbaI	TGATCA	1 cut(s)	813
FokI	GGATG	3 cut(s)	1002, 1692, 2018
FriOI	GRGCYC	1 cut(s)	278
FspI	TGCGCA	2 cut(s)	772, 1116
GlaI	GCGC	4 cut(s)	208, 210, 772, 1116
GsuI	CTGGAG	2 cut(s)	85, 446
HaeIII	GGCC	3 cut(s)	35, 154, 644
HapII	CCGG	5 cut(s)	110, 151, 474, 1648, 2003
HgaI	GACGC	1 cut(s)	1761
HhaI	GCGC	4 cut(s)	209, 211, 773, 1117
Hin6I	GCGC	4 cut(s)	207, 209, 771, 1115
HinP1I	GCGC	4 cut(s)	207, 209, 771, 1115
HincII	GTYRAC	2 cut(s)	148, 979
HindII	GTYRAC	2 cut(s)	148, 979
HindIII	AAGCTT	1 cut(s)	1333
HpaII	CCGG	5 cut(s)	110, 151, 474, 1648, 2003
HphI	GGTGA	7 cut(s)	593, 1505, 1613, 1637, 1751, 1934, 1982
Hpy166II	GTNNAC	7 cut(s)	148, 305, 548, 756, 844, 979, 1267
Hpy8I	GTNNAC	7 cut(s)	148, 305, 548, 756, 844, 979, 1267
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	8 cut(s)	265, 497, 533, 634, 1320, 1419, 1615, 1706
HpyCH4III	ACNGT	6 cut(s)	484, 552, 678, 1782, 1869, 2054
HpyCH4IV	ACGT	2 cut(s)	1696, 1982
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1175, 1184, 1803
HpyF3I	CTNAG	6 cut(s)	76, 277, 1070, 1417, 1769, 2021
HpySE526I	ACGT	2 cut(s)	1696, 1982
HspAI	GCGC	4 cut(s)	207, 209, 771, 1115
Kpn2I	TCCGGA	1 cut(s)	109
Ksp22I	TGATCA	1 cut(s)	813
Kzo9I	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
LmnI	GCTCC	4 cut(s)	104, 427, 573, 2050
Lsp1109I	GCAGC	8 cut(s)	5, 105, 121, 715, 1312, 1438, 1488, 1767
LweI	GCATC	6 cut(s)	558, 736, 758, 1187, 1448, 1831
MaeII	ACGT	2 cut(s)	1696, 1982
MaeIII	GTNAC	4 cut(s)	469, 478, 1237, 2012
MalI	GATC	8 cut(s)	170, 423, 815, 1477, 1614, 1767, 1820, 1910
MbiI	CCGCTC	2 cut(s)	1498, 1744
MboI	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
MflI	RGATCY	2 cut(s)	421, 1765
MhlI	GDGCHC	5 cut(s)	278, 432, 846, 1269, 1568
MluCI	AATT	9 cut(s)	7, 1107, 1480, 1506, 1593, 1836, 1872, 1894, 2060
MlyI	GAGTC	5 cut(s)	131, 569, 1114, 1267, 1430
MmeI	TCCRAC	1 cut(s)	1042
MroI	TCCGGA	1 cut(s)	109
MroXI	GAANNNNTTC	1 cut(s)	1355
MseI	TTAA	5 cut(s)	1470, 1485, 1572, 1871, 1875
MslI	CAYNNNNRTG	1 cut(s)	1164
MspA1I	CMGCKG	1 cut(s)	96
MspI	CCGG	5 cut(s)	110, 151, 474, 1648, 2003
MspR9I	CCNGG	4 cut(s)	848, 875, 1214, 1649
Mva1269I	GAATGC	1 cut(s)	857
MvaI	CCWGG	3 cut(s)	848, 875, 1214
MvnI	CGCG	3 cut(s)	38, 207, 209
MwoI	GCNNNNNNNGC	3 cut(s)	1175, 1184, 1803
NciI	CCSGG	1 cut(s)	1649
NdeI	CATATG	4 cut(s)	347, 511, 528, 818
NdeII	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
NlaIV	GGNNCC	5 cut(s)	100, 575, 1053, 1129, 1527
NmuCI	GTSAC	2 cut(s)	469, 2012
NsbI	TGCGCA	2 cut(s)	772, 1116
NspI	RCATGY	6 cut(s)	395, 872, 906, 1143, 1851, 1891
PacI	TTAATTAA	1 cut(s)	1875
PaeI	GCATGC	2 cut(s)	395, 1891
PaeR7I	CTCGAG	1 cut(s)	198
PagI	TCATGA	1 cut(s)	1039
PauI	GCGCGC	1 cut(s)	207
PciI	ACATGT	3 cut(s)	868, 1139, 1847
PctI	GAATGC	1 cut(s)	857
PdmI	GAANNNNTTC	1 cut(s)	1355
PfeI	GAWTC	8 cut(s)	40, 163, 458, 716, 1036, 1065, 1074, 1586
Pfl23II	CGTACG	1 cut(s)	1983
PfoI	TCCNGGA	1 cut(s)	873
PleI	GAGTC	5 cut(s)	130, 568, 1114, 1267, 1429
PpsI	GAGTC	5 cut(s)	130, 568, 1114, 1267, 1429
Ppu21I	YACGTR	1 cut(s)	1697
PscI	ACATGT	3 cut(s)	868, 1139, 1847
Psp6I	CCWGG	3 cut(s)	846, 873, 1212
PspGI	CCWGG	3 cut(s)	846, 873, 1212
PspLI	CGTACG	1 cut(s)	1983
PspN4I	GGNNCC	5 cut(s)	100, 575, 1053, 1129, 1527
PspPI	GGNCC	1 cut(s)	1526
PspXI	VCTCGAGB	1 cut(s)	198
PstNI	CAGNNNCTG	2 cut(s)	284, 1289
PsuI	RGATCY	2 cut(s)	421, 1765
PteI	GCGCGC	1 cut(s)	207
RsaI	GTAC	5 cut(s)	516, 734, 1443, 1784, 1985
RsaNI	GTAC	5 cut(s)	515, 733, 1442, 1783, 1984
RseI	CAYNNNNRTG	1 cut(s)	1164
SaqAI	TTAA	5 cut(s)	1470, 1485, 1572, 1871, 1875
Sau3AI	GATC	8 cut(s)	168, 421, 813, 1475, 1612, 1765, 1818, 1908
Sau96I	GGNCC	1 cut(s)	1526
ScaI	AGTACT	1 cut(s)	1443
SchI	GAGTC	5 cut(s)	131, 569, 1114, 1267, 1430
ScrFI	CCNGG	4 cut(s)	848, 875, 1214, 1649
SduI	GDGCHC	5 cut(s)	278, 432, 846, 1269, 1568
SfaNI	GCATC	6 cut(s)	558, 736, 758, 1187, 1448, 1831
SfcI	CTRYAG	2 cut(s)	1192, 2053
Sfr274I	CTCGAG	1 cut(s)	198
SinI	GGWCC	1 cut(s)	1526
SlaI	CTCGAG	1 cut(s)	198
SmiMI	CAYNNNNRTG	1 cut(s)	1164
SmlI	CTYRAG	2 cut(s)	198, 1561
SmoI	CTYRAG	2 cut(s)	198, 1561
SphI	GCATGC	2 cut(s)	395, 1891
Sse9I	AATT	9 cut(s)	7, 1107, 1480, 1506, 1593, 1836, 1872, 1894, 2060
SsiI	CCGC	6 cut(s)	36, 96, 571, 1262, 1498, 1744
SspI	AATATT	1 cut(s)	368
StyD4I	CCNGG	4 cut(s)	846, 873, 1212, 1647
StyI	CCWWGG	2 cut(s)	577, 1520
TaaI	ACNGT	6 cut(s)	484, 552, 678, 1782, 1869, 2054
TaiI	ACGT	2 cut(s)	1699, 1985
TaqI	TCGA	5 cut(s)	81, 141, 199, 1370, 1516
TasI	AATT	9 cut(s)	7, 1107, 1480, 1506, 1593, 1836, 1872, 1894, 2060
TatI	WGTACW	1 cut(s)	1441
TauI	GCSGC	3 cut(s)	38, 99, 1501
TfiI	GAWTC	8 cut(s)	40, 163, 458, 716, 1036, 1065, 1074, 1586
Tru1I	TTAA	5 cut(s)	1470, 1485, 1572, 1871, 1875
Tru9I	TTAA	5 cut(s)	1470, 1485, 1572, 1871, 1875
TscAI	CASTG	3 cut(s)	412, 663, 1214
TseFI	GTSAC	2 cut(s)	469, 2012
TseI	GCWGC	8 cut(s)	18, 93, 134, 703, 1325, 1451, 1501, 1755
Tsp45I	GTSAC	2 cut(s)	469, 2012
TspGWI	ACGGA	1 cut(s)	67
TspRI	CASTG	3 cut(s)	412, 663, 1214
VneI	GTGCAC	2 cut(s)	842, 1265
VpaK11BI	GGWCC	1 cut(s)	1526
XagI	CCTNNNNNAGG	1 cut(s)	948
XapI	RAATTY	4 cut(s)	7, 1480, 1593, 2060
XceI	RCATGY	6 cut(s)	395, 872, 906, 1143, 1851, 1891
XcmI	CCANNNNNNNNNTGG	1 cut(s)	854
XhoI	CTCGAG	1 cut(s)	198
XmnI	GAANNNNTTC	1 cut(s)	1355
ZrmI	AGTACT	1 cut(s)	1443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.