Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0001100

Physical Location & Seq

Genomic Coordinates Forward (+)

30768271 .. 30772701

Gene Structure 4431 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1242000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1170 bp

ATGTCTCATCGTAAGTTTGAACACCCAAGACATGGCTCTTTGGGATTTCTTCCAAGGAAAAGAGCAGCCCGCCACAGAGGAAAAGTGAAGGCCTTCCCCAAAGACGATCCAACGAAAACTCCCAGATTGACTGCTTTCCTGGGATACAAAGCTGGAATGACCCATATTGTGAGAGATGTTGAAAAACCCGGATCAAAGTTACACAAGAAAGAAACATGTGAAGCAGTTACAGTTATTGAAACACCACCAATGGTGGTGGTTGGTGTTGTTGGTTATGTGAAGACACCCCGTGGTCTCCGTTCATTGGACACAGTTTGGGCCCAGCATTTGAGTGAGGAGGTGAAGAGGAGATTCTACAAGAACTGGTGCAAGTCAAAAAAGAAAGCATTCACCAAGTACTCAAAAAGGTATGAGAGCGAAGATGGGAAAAAGGACATCCAGGCTCAGTTGGAGAAAATGAAGAAATACTGCTCTGTTATTCGTGTTTTAGCCCACACTCAGATTAGGAAAATGAAGGGGTTGAAGCAGAAGAAAGCCCATCTGATGGAGATTCAAGTTAATGGTGGGGAAGTTGCAAAGAAGGTTGACTACGCTTATAGCTTGTTTGAGAAGCAGGTTCCTGTTGATGCTGTTTTCCAGAAAGATGAGATGATTGACATTATTGGGGTTACCAAGGGGAAGGGTTATGAGGGTGTGGTGACTCGATGGGGTGTCACCCGTCTTCCACGTAAGACCCATCGTGGTCTACGTAAAGTAGCCTGTATTGGTGCCTGGCATCCAGCTAGGGTGTCATTTACTGTTGCCAGGGCTGGGCAGAATGGTTACCACCATCGTACTGAGATGAACAAGAAGATTTACAAGCTTGGGAAGGCTGACCAAGAGTCGCACACTGCAATGACTGAGTTCGACAGGACTGAGAAGGATATTACCCCAATGGGAGGTTTCCCGCACTATGGTGAAGTGAAACAGGATTACCTTCTAATGAAAGGCTGCTGCGTGGGTCCTAAAAAGCGCGTTGTTACCCTGAGGCAGACGCTTCTGAAGCAGACATCTAGGGTTGCGTTGGAGGACATTAAGCTCAAGTTCATCGATACATCGTCAAAATTTGGCCATGGCCGCTTCCAGACTACCCAAGAGAAGGCTAGGTACTACGGCCGGCTCAAGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022625 GO:0022626 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L3

Protein Analysis

390

Amino Acids

44.6

Weight (kDa)

10.1

Isoelectric Point (pI)

29.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_L3	PF00297	1 - 370	3.4e-196	Ribosomal protein L3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G43170 AT1G61580
fragaria_vesca	FvH4_2g13300 FvH4_2g13300 FvH4_2g13300 FvH4_6g25400 FvH4_6g25400 FvH4_6g25400 FvH4_6g25400
malus_domestica	MD04G1044600.v1.1 MD08G1242000.v1.1 MD15G1435700.v1.1
prunus_persica	Prupe.1G579300_v2.0.a1 Prupe.1G579300_v2.0.a1 Prupe.8G036200_v2.0.a1 Prupe.8G036200_v2.0.a1
pyrus_communis	pycom15g38440
rosa_chinensis	RchiOBHm_Chr2g0125851 RchiOBHm_Chr6g0274741 RchiOBHm_Chr7g0220671
rosa_laevigata	RLG00000002211
rosa_multiflora	Rmu_co8485815.1_g000001 Rmu_sc0006216.1_g000001 Rmu_sc0006223.1_g000009 Rmu_sc0013532.1_g000002 Rmu_ssc0000189.1_g000006
rosa_roxburghii	Rroxscaffold_2G00117610 Rroxscaffold_2G00117670 Rroxscaffold_3G00239250 Rroxscaffold_7G00193980
rosa_rugosa	Rorug02G0259500 Rorug02G0259600 Rorug02G0259700 Rorug02G0259800 Rorug02G0259900 Rorug06G0083600 Rorug07G0195800 Rorug07G0195900 Rorug07G0196000.1 Rorug07G0196100
rosa_samantha	Rh2CG307400 Rh6AG199400 Rh6BG203200 Rh6CG203400 Rh7AG336800 Rh7BG327700 Rh7CG354800 Rh7DG333400
rosa_wichuraiana	Rw2G025710 Rw6G017340 Rw7G028730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	604
AccB1I	GGYRCC	1 cut(s)	767
AccB7I	CCANNNNNTGG	2 cut(s)	32, 544
AccI	GTMKAC	1 cut(s)	745
AccII	CGCG	1 cut(s)	1014
AciI	CCGC	3 cut(s)	70, 947, 1117
AclWI	GGATC	2 cut(s)	101, 199
AcoI	YGGCCR	3 cut(s)	1108, 1114, 1153
AcsI	RAATTY	1 cut(s)	1103
AcuI	CTGAAG	1 cut(s)	1061
AdeI	CACNNNGTG	1 cut(s)	290
AfaI	GTAC	3 cut(s)	398, 835, 1148
AfiI	CCNNNNNNNGG	8 cut(s)	32, 304, 544, 810, 938, 953, 1138, 1162
AflIII	ACRYGT	1 cut(s)	215
AgsI	TTSAA	5 cut(s)	20, 182, 239, 523, 554
AhdI	GACNNNNNGTC	1 cut(s)	880
AjnI	CCWGG	4 cut(s)	138, 438, 770, 803
AleI	CACNNNNGTG	1 cut(s)	954
AluBI	AGCT	5 cut(s)	152, 600, 782, 862, 1078
AluI	AGCT	5 cut(s)	152, 600, 782, 862, 1078
Alw26I	GTCTC	2 cut(s)	9, 299
AlwI	GGATC	2 cut(s)	101, 199
AoxI	GGCC	5 cut(s)	90, 318, 1108, 1114, 1153
ApaI	GGGCCC	1 cut(s)	322
ApeKI	GCWGC	3 cut(s)	65, 990, 993
ApoI	RAATTY	1 cut(s)	1103
Asp700I	GAANNNNTTC	2 cut(s)	92, 386
AspLEI	GCGC	1 cut(s)	1014
AspS9I	GGNCC	3 cut(s)	318, 319, 1001
AsuC2I	CCSGG	1 cut(s)	189
AsuHPI	GGTGA	5 cut(s)	352, 382, 706, 709, 968
AvaII	GGWCC	1 cut(s)	1001
AxyI	CCTNAGG	1 cut(s)	1025
BaeGI	GKGCMC	1 cut(s)	322
BalI	TGGCCA	1 cut(s)	1110
BanI	GGYRCC	1 cut(s)	767
BanII	GRGCYC	1 cut(s)	322
BarI	GAAGNNNNNNTAC	4 cut(s)	572, 604, 1130, 1162
BbsI	GAAGAC	2 cut(s)	287, 713
BbvI	GCAGC	3 cut(s)	77, 977, 980
BccI	CCATC	6 cut(s)	416, 538, 546, 699, 744, 837
BceAI	ACGGC	1 cut(s)	1168
BciT130I	CCWGG	4 cut(s)	140, 440, 772, 805
BciVI	GTATCC	1 cut(s)	137
BcnI	CCSGG	1 cut(s)	189
BcoDI	GTCTC	2 cut(s)	9, 299
BfaI	CTAG	3 cut(s)	783, 1053, 1143
BfuAI	ACCTGC	1 cut(s)	604
BfuI	GTATCC	1 cut(s)	137
BisI	GCNGC	4 cut(s)	66, 991, 994, 1117
BlsI	GCNGC	4 cut(s)	67, 992, 995, 1118
BmcAI	AGTACT	1 cut(s)	398
Bme1390I	CCNGG	5 cut(s)	140, 189, 440, 772, 805
Bme18I	GGWCC	1 cut(s)	1001
BmeRI	GACNNNNNGTC	1 cut(s)	880
BmgT120I	GGNCC	3 cut(s)	318, 319, 1001
BmiI	GGNNCC	4 cut(s)	320, 618, 769, 1002
BmrFI	CCNGG	5 cut(s)	140, 189, 440, 772, 805
BmsI	GCATC	2 cut(s)	616, 784
BpiI	GAAGAC	2 cut(s)	287, 713
BpuEI	CTTGAG	2 cut(s)	1064, 1145
BpuMI	CCSGG	1 cut(s)	189
Bsa29I	ATCGAT	1 cut(s)	1089
BsaAI	YACGTR	2 cut(s)	728, 749
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	6 cut(s)	53, 139, 289, 672, 804, 1111
BsaXI	ACNNNNNCTCC	2 cut(s)	103, 133
Bsc4I	CCNNNNNNNGG	8 cut(s)	32, 304, 544, 810, 938, 953, 1138, 1162
Bse118I	RCCGGY	1 cut(s)	1155
Bse1I	ACTGG	1 cut(s)	368
Bse21I	CCTNAGG	1 cut(s)	1025
Bse3DI	GCAATG	1 cut(s)	900
BseBI	CCWGG	4 cut(s)	140, 440, 772, 805
BseCI	ATCGAT	1 cut(s)	1089
BseDI	CCNNGG	6 cut(s)	53, 139, 289, 672, 804, 1111
BseGI	GGATG	2 cut(s)	435, 775
BseLI	CCNNNNNNNGG	8 cut(s)	32, 304, 544, 810, 938, 953, 1138, 1162
BseMI	GCAATG	1 cut(s)	900
BseMII	CTCAG	6 cut(s)	458, 512, 828, 891, 906, 1016
BseNI	ACTGG	1 cut(s)	368
BseRI	GAGGAG	2 cut(s)	350, 361
BseSI	GKGCMC	1 cut(s)	322
BseX3I	CGGCCG	1 cut(s)	1153
BseXI	GCAGC	3 cut(s)	77, 977, 980
BseYI	CCCAGC	2 cut(s)	321, 809
Bsh1236I	CGCG	1 cut(s)	1014
Bsh1285I	CGRYCG	1 cut(s)	1156
BshFI	GGCC	5 cut(s)	92, 320, 1110, 1116, 1155
BshNI	GGYRCC	1 cut(s)	767
BshVI	ATCGAT	1 cut(s)	1089
BsiEI	CGRYCG	1 cut(s)	1156
BsiSI	CCGG	2 cut(s)	189, 1156
BslI	CCNNNNNNNGG	8 cut(s)	32, 304, 544, 810, 938, 953, 1138, 1162
BsmAI	GTCTC	2 cut(s)	9, 299
BsmI	GAATGC	1 cut(s)	386
BsnI	GGCC	5 cut(s)	92, 320, 1110, 1116, 1155
Bso31I	GGTCTC	1 cut(s)	299
Bsp120I	GGGCCC	1 cut(s)	318
Bsp1286I	GDGCHC	1 cut(s)	322
Bsp143I	GATC	2 cut(s)	106, 191
Bsp19I	CCATGG	1 cut(s)	1111
BspACI	CCGC	3 cut(s)	70, 947, 1117
BspANI	GGCC	5 cut(s)	92, 320, 1110, 1116, 1155
BspCNI	CTCAG	6 cut(s)	457, 511, 829, 892, 907, 1017
BspDI	ATCGAT	1 cut(s)	1089
BspFNI	CGCG	1 cut(s)	1014
BspLI	GGNNCC	4 cut(s)	320, 618, 769, 1002
BspMI	ACCTGC	1 cut(s)	604
BspPI	GGATC	2 cut(s)	101, 199
BspT107I	GGYRCC	1 cut(s)	767
BspTNI	GGTCTC	1 cut(s)	299
BsrDI	GCAATG	1 cut(s)	900
BsrFI	RCCGGY	1 cut(s)	1155
BsrI	ACTGG	1 cut(s)	368
BssAI	RCCGGY	1 cut(s)	1155
BssECI	CCNNGG	6 cut(s)	53, 139, 289, 672, 804, 1111
BssMI	GATC	2 cut(s)	106, 191
BssT1I	CCWWGG	3 cut(s)	53, 672, 1111
Bst2UI	CCWGG	4 cut(s)	140, 440, 772, 805
Bst4CI	ACNGT	3 cut(s)	232, 313, 799
Bst6I	CTCTTC	1 cut(s)	338
BstBAI	YACGTR	2 cut(s)	728, 749
BstC8I	GCNNGC	2 cut(s)	70, 1157
BstDEI	CTNAG	6 cut(s)	444, 498, 837, 900, 915, 1025
BstDSI	CCRYGG	2 cut(s)	289, 1111
BstEII	GGTNACC	2 cut(s)	667, 821
BstF5I	GGATG	2 cut(s)	435, 775
BstFNI	CGCG	1 cut(s)	1014
BstHHI	GCGC	1 cut(s)	1014
BstKTI	GATC	2 cut(s)	109, 194
BstMAI	GTCTC	2 cut(s)	9, 299
BstMBI	GATC	2 cut(s)	106, 191
BstMCI	CGRYCG	1 cut(s)	1156
BstMWI	GCNNNNNNNGC	2 cut(s)	1042, 1116
BstNI	CCWGG	4 cut(s)	140, 440, 772, 805
BstNSI	RCATGY	1 cut(s)	219
BstPI	GGTNACC	2 cut(s)	667, 821
BstSCI	CCNGG	5 cut(s)	138, 187, 438, 770, 803
BstSLI	GKGCMC	1 cut(s)	322
BstSNI	TACGTA	1 cut(s)	749
BstUI	CGCG	1 cut(s)	1014
BstV1I	GCAGC	3 cut(s)	77, 977, 980
BstV2I	GAAGAC	2 cut(s)	287, 713
BstZI	CGGCCG	1 cut(s)	1153
Bsu15I	ATCGAT	1 cut(s)	1089
Bsu36I	CCTNAGG	1 cut(s)	1025
BsuI	GTATCC	1 cut(s)	137
BsuRI	GGCC	5 cut(s)	92, 320, 1110, 1116, 1155
BsuTUI	ATCGAT	1 cut(s)	1089
BtgI	CCRYGG	2 cut(s)	289, 1111
BtsCI	GGATG	2 cut(s)	435, 775
BtsI	GCAGTG	1 cut(s)	888
BtsIMutI	CAGTG	1 cut(s)	888
BveI	ACCTGC	1 cut(s)	604
Cac8I	GCNNGC	2 cut(s)	70, 1157
CfoI	GCGC	1 cut(s)	1014
Cfr10I	RCCGGY	1 cut(s)	1155
Cfr13I	GGNCC	3 cut(s)	318, 319, 1001
ClaI	ATCGAT	1 cut(s)	1089
CseI	GACGC	1 cut(s)	1042
Csp6I	GTAC	3 cut(s)	397, 834, 1147
CspCI	CAANNNNNGTGG	2 cut(s)	237, 272
CviAII	CATG	3 cut(s)	32, 216, 1112
CviQI	GTAC	3 cut(s)	397, 834, 1147
DdeI	CTNAG	6 cut(s)	444, 498, 837, 900, 915, 1025
DpnI	GATC	2 cut(s)	108, 193
DpnII	GATC	2 cut(s)	106, 191
DraIII	CACNNNGTG	1 cut(s)	290
DriI	GACNNNNNGTC	1 cut(s)	880
EaeI	YGGCCR	3 cut(s)	1108, 1114, 1153
EagI	CGGCCG	1 cut(s)	1153
Eam1104I	CTCTTC	1 cut(s)	338
Eam1105I	GACNNNNNGTC	1 cut(s)	880
EarI	CTCTTC	1 cut(s)	338
EclXI	CGGCCG	1 cut(s)	1153
Eco105I	TACGTA	1 cut(s)	749
Eco130I	CCWWGG	3 cut(s)	53, 672, 1111
Eco147I	AGGCCT	1 cut(s)	92
Eco24I	GRGCYC	1 cut(s)	322
Eco31I	GGTCTC	1 cut(s)	299
Eco47I	GGWCC	1 cut(s)	1001
Eco52I	CGGCCG	1 cut(s)	1153
Eco57I	CTGAAG	1 cut(s)	1061
Eco81I	CCTNAGG	1 cut(s)	1025
Eco91I	GGTNACC	2 cut(s)	667, 821
EcoO109I	RGGNCCY	1 cut(s)	1001
EcoO65I	GGTNACC	2 cut(s)	667, 821
EcoRII	CCWGG	4 cut(s)	138, 438, 770, 803
EcoT14I	CCWWGG	3 cut(s)	53, 672, 1111
EcoT38I	GRGCYC	1 cut(s)	322
ErhI	CCWWGG	3 cut(s)	53, 672, 1111
FaeI	CATG	3 cut(s)	35, 219, 1115
FaiI	YATR	9 cut(s)	33, 165, 217, 276, 411, 597, 687, 954, 1113
FatI	CATG	3 cut(s)	31, 215, 1111
FauI	CCCGC	2 cut(s)	77, 954
FblI	GTMKAC	1 cut(s)	745
Fnu4HI	GCNGC	4 cut(s)	66, 991, 994, 1117
FokI	GGATG	2 cut(s)	422, 762
FriOI	GRGCYC	1 cut(s)	322
Fsp4HI	GCNGC	4 cut(s)	66, 991, 994, 1117
FspBI	CTAG	3 cut(s)	783, 1053, 1143
GlaI	GCGC	1 cut(s)	1013
GluI	GCNGC	4 cut(s)	66, 991, 994, 1117
GsaI	CCCAGC	2 cut(s)	325, 813
HaeIII	GGCC	5 cut(s)	92, 320, 1110, 1116, 1155
HapII	CCGG	2 cut(s)	189, 1156
HgaI	GACGC	1 cut(s)	1042
HhaI	GCGC	1 cut(s)	1014
Hin1II	CATG	3 cut(s)	35, 219, 1115
Hin6I	GCGC	1 cut(s)	1012
HinP1I	GCGC	1 cut(s)	1012
HincII	GTYRAC	1 cut(s)	586
HindII	GTYRAC	1 cut(s)	586
HindIII	AAGCTT	1 cut(s)	860
HinfI	GANTC	4 cut(s)	351, 550, 700, 881
HpaII	CCGG	2 cut(s)	189, 1156
HphI	GGTGA	5 cut(s)	352, 382, 706, 709, 968
Hpy166II	GTNNAC	2 cut(s)	586, 746
Hpy188I	TCNGA	3 cut(s)	501, 543, 1041
Hpy188III	TCNNGA	2 cut(s)	637, 1123
Hpy8I	GTNNAC	2 cut(s)	586, 746
HpyAV	CCTTC	9 cut(s)	82, 103, 508, 574, 673, 862, 913, 986, 1132
HpyCH4III	ACNGT	3 cut(s)	232, 313, 799
HpyCH4IV	ACGT	2 cut(s)	727, 748
HpyCH4V	TGCA	3 cut(s)	369, 575, 893
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1042, 1116
HpyF3I	CTNAG	6 cut(s)	444, 498, 837, 900, 915, 1025
HpySE526I	ACGT	2 cut(s)	727, 748
Hsp92II	CATG	3 cut(s)	35, 219, 1115
HspAI	GCGC	1 cut(s)	1012
KroI	GCCGGC	1 cut(s)	1155
KroNI	GCCGGC	1 cut(s)	1157
Kzo9I	GATC	2 cut(s)	106, 191
Lsp1109I	GCAGC	3 cut(s)	77, 977, 980
LweI	GCATC	2 cut(s)	616, 784
MaeI	CTAG	3 cut(s)	783, 1053, 1143
MaeII	ACGT	2 cut(s)	727, 748
MaeIII	GTNAC	7 cut(s)	198, 226, 667, 697, 712, 821, 1018
MalI	GATC	2 cut(s)	108, 193
MboI	GATC	2 cut(s)	106, 191
MboII	GAAGA	8 cut(s)	41, 292, 355, 431, 472, 541, 713, 862
MhlI	GDGCHC	1 cut(s)	322
MlsI	TGGCCA	1 cut(s)	1110
MluCI	AATT	1 cut(s)	1103
MluNI	TGGCCA	1 cut(s)	1110
MlyI	GAGTC	2 cut(s)	694, 890
MmeI	TCCRAC	3 cut(s)	134, 429, 1044
MnlI	CCTC	8 cut(s)	71, 328, 331, 339, 682, 932, 1020, 1060
Mox20I	TGGCCA	1 cut(s)	1110
MroNI	GCCGGC	1 cut(s)	1155
MroXI	GAANNNNTTC	2 cut(s)	92, 386
MscI	TGGCCA	1 cut(s)	1110
MseI	TTAA	3 cut(s)	558, 1074, 1168
MslI	CAYNNNNRTG	3 cut(s)	330, 893, 954
Msp20I	TGGCCA	1 cut(s)	1110
MspI	CCGG	2 cut(s)	189, 1156
MspR9I	CCNGG	5 cut(s)	140, 189, 440, 772, 805
Mva1269I	GAATGC	1 cut(s)	386
MvaI	CCWGG	4 cut(s)	140, 440, 772, 805
MvnI	CGCG	1 cut(s)	1014
MwoI	GCNNNNNNNGC	2 cut(s)	1042, 1116
NaeI	GCCGGC	1 cut(s)	1157
NciI	CCSGG	1 cut(s)	189
NcoI	CCATGG	1 cut(s)	1111
NdeII	GATC	2 cut(s)	106, 191
NgoMIV	GCCGGC	1 cut(s)	1155
NlaIII	CATG	3 cut(s)	35, 219, 1115
NlaIV	GGNNCC	4 cut(s)	320, 618, 769, 1002
NmuCI	GTSAC	2 cut(s)	697, 712
NspI	RCATGY	1 cut(s)	219
OliI	CACNNNNGTG	1 cut(s)	954
PceI	AGGCCT	1 cut(s)	92
PciI	ACATGT	1 cut(s)	215
PcsI	WCGNNNNNNNCGW	1 cut(s)	745
PctI	GAATGC	1 cut(s)	386
PdiI	GCCGGC	1 cut(s)	1157
PdmI	GAANNNNTTC	2 cut(s)	92, 386
PfeI	GAWTC	2 cut(s)	351, 550
PflMI	CCANNNNNTGG	2 cut(s)	32, 544
PkrI	GCNGC	4 cut(s)	67, 992, 995, 1118
PleI	GAGTC	2 cut(s)	694, 889
PpsI	GAGTC	2 cut(s)	694, 889
Ppu21I	YACGTR	2 cut(s)	728, 749
PpuMI	RGGWCCY	1 cut(s)	1001
PscI	ACATGT	1 cut(s)	215
Psp5II	RGGWCCY	1 cut(s)	1001
Psp6I	CCWGG	4 cut(s)	138, 438, 770, 803
PspEI	GGTNACC	2 cut(s)	667, 821
PspFI	CCCAGC	2 cut(s)	321, 809
PspGI	CCWGG	4 cut(s)	138, 438, 770, 803
PspN4I	GGNNCC	4 cut(s)	320, 618, 769, 1002
PspOMI	GGGCCC	1 cut(s)	318
PspPI	GGNCC	3 cut(s)	318, 319, 1001
PspPPI	RGGWCCY	1 cut(s)	1001
RsaI	GTAC	3 cut(s)	398, 835, 1148
RsaNI	GTAC	3 cut(s)	397, 834, 1147
RseI	CAYNNNNRTG	3 cut(s)	330, 893, 954
SaqAI	TTAA	3 cut(s)	558, 1074, 1168
SatI	GCNGC	4 cut(s)	66, 991, 994, 1117
Sau3AI	GATC	2 cut(s)	106, 191
Sau96I	GGNCC	3 cut(s)	318, 319, 1001
ScaI	AGTACT	1 cut(s)	398
SchI	GAGTC	2 cut(s)	694, 890
ScrFI	CCNGG	5 cut(s)	140, 189, 440, 772, 805
SduI	GDGCHC	1 cut(s)	322
SfaNI	GCATC	2 cut(s)	616, 784
SinI	GGWCC	1 cut(s)	1001
SmiMI	CAYNNNNRTG	3 cut(s)	330, 893, 954
SmlI	CTYRAG	2 cut(s)	1079, 1160
SmoI	CTYRAG	2 cut(s)	1079, 1160
SnaBI	TACGTA	1 cut(s)	749
Sse9I	AATT	1 cut(s)	1103
SseBI	AGGCCT	1 cut(s)	92
SsiI	CCGC	3 cut(s)	70, 947, 1117
SspMI	CTAG	3 cut(s)	783, 1053, 1143
StuI	AGGCCT	1 cut(s)	92
StyD4I	CCNGG	5 cut(s)	138, 187, 438, 770, 803
StyI	CCWWGG	3 cut(s)	53, 672, 1111
TaaI	ACNGT	3 cut(s)	232, 313, 799
TaiI	ACGT	2 cut(s)	730, 751
TaqI	TCGA	3 cut(s)	703, 906, 1089
TasI	AATT	1 cut(s)	1103
TatI	WGTACW	1 cut(s)	396
TauI	GCSGC	1 cut(s)	1119
TfiI	GAWTC	2 cut(s)	351, 550
Tru1I	TTAA	3 cut(s)	558, 1074, 1168
Tru9I	TTAA	3 cut(s)	558, 1074, 1168
TscAI	CASTG	1 cut(s)	895
TseFI	GTSAC	2 cut(s)	697, 712
TseI	GCWGC	3 cut(s)	65, 990, 993
Tsp45I	GTSAC	2 cut(s)	697, 712
TspDTI	ATGAA	6 cut(s)	291, 473, 527, 857, 998, 1075
TspGWI	ACGGA	1 cut(s)	287
TspRI	CASTG	1 cut(s)	895
Van91I	CCANNNNNTGG	2 cut(s)	32, 544
VpaK11BI	GGWCC	1 cut(s)	1001
XapI	RAATTY	1 cut(s)	1103
XceI	RCATGY	1 cut(s)	219
XmiI	GTMKAC	1 cut(s)	745
XmnI	GAANNNNTTC	2 cut(s)	92, 386
XspI	CTAG	3 cut(s)	783, 1053, 1143
ZrmI	AGTACT	1 cut(s)	398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.