No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G76840 |
| fragaria_vesca | FvH4_2g13360 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 FvH4_2g13370 |
| rosa_chinensis | RchiOBHm_Chr6g0274911 |
| rosa_laevigata | RLG00000013508 RLG00000013512 |
| rosa_multiflora | Rmu_sc0007760.1_g000001 Rmu_sc0020413.1_g000002 Rmu_sc0042123.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00193800 Rroxscaffold_7G00193810 Rroxscaffold_7G00193840 |
| rosa_rugosa | Rorug06G0085700 Rorug06G0085800 Rorug06G0085900 Rorug06G0086000 Rorug06G0086100 Rorug06G0086300 |
| rosa_samantha | Rh6AG200800 Rh6AG201100 Rh6AG201200 Rh6BG204500 Rh6BG204800 Rh6CG205900 Rh6CG206100 Rh6CG206200 Rh6DG196100 Rh6DG196300 Rh7BG146800 |
| rosa_wichuraiana | Rw6G017480 Rw6G017500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 893 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 4052, 5144 |
| Acc36I | ACCTGC | 2 cut(s) | 1864, 4192 |
| Acc65I | GGTACC | 1 cut(s) | 3485 |
| AccB1I | GGYRCC | 3 cut(s) | 613, 3485, 5198 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 4604, 5234, 6161 |
| AccI | GTMKAC | 1 cut(s) | 3534 |
| AccII | CGCG | 1 cut(s) | 14 |
| AccIII | TCCGGA | 1 cut(s) | 1579 |
| AciI | CCGC | 6 cut(s) | 632, 1946, 3360, 3915, 4452, 5715 |
| AcoI | YGGCCR | 2 cut(s) | 87, 4252 |
| AcuI | CTGAAG | 9 cut(s) | 759, 1471, 1881, 1926, 3468, 3648, 3903, 4323, 6390 |
| AcyI | GRCGYC | 1 cut(s) | 3363 |
| AfeI | AGCGCT | 1 cut(s) | 39 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 710, 2248, 2436, 2924, 4604, 4742, 5234, 6161 |
| AflIII | ACRYGT | 1 cut(s) | 3617 |
| AgeI | ACCGGT | 1 cut(s) | 3529 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 5740 |
| AjnI | CCWGG | 6 cut(s) | 799, 2587, 3653, 4254, 4911, 5908 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2340, 2372 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 3979, 4011, 6057, 6089 |
| Alw21I | GWGCWC | 2 cut(s) | 3571, 6238 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 425, 2957, 3077, 4604 |
| Aor13HI | TCCGGA | 1 cut(s) | 1579 |
| Aor51HI | AGCGCT | 1 cut(s) | 39 |
| AoxI | GGCC | 5 cut(s) | 87, 3073, 4252, 4909, 5737 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 287, 319, 1336, 1368 |
| AseI | ATTAAT | 3 cut(s) | 1449, 2352, 3395 |
| AsiGI | ACCGGT | 1 cut(s) | 3529 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1074, 4271 |
| Asp718I | GGTACC | 1 cut(s) | 3485 |
| AspLEI | GCGC | 1 cut(s) | 40 |
| AspS9I | GGNCC | 7 cut(s) | 675, 1404, 1652, 2585, 3074, 4595, 5441 |
| AsuII | TTCGAA | 2 cut(s) | 5477, 5934 |
| AvaII | GGWCC | 6 cut(s) | 675, 1404, 1652, 2585, 4595, 5441 |
| BaeI | ACNNNNGTAYC | 8 cut(s) | 2195, 2228, 4593, 4626, 5097, 5130, 5955, 5988 |
| BalI | TGGCCA | 1 cut(s) | 4254 |
| BamHI | GGATCC | 2 cut(s) | 2677, 6085 |
| BanI | GGYRCC | 3 cut(s) | 613, 3485, 5198 |
| BanII | GRGCYC | 1 cut(s) | 6238 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 636, 668 |
| BbsI | GAAGAC | 4 cut(s) | 3891, 5358, 5466, 6302 |
| Bbv12I | GWGCWC | 2 cut(s) | 3571, 6238 |
| BbvCI | CCTCAGC | 2 cut(s) | 3459, 4092 |
| BceAI | ACGGC | 1 cut(s) | 5752 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 41, 75 |
| BciT130I | CCWGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| BciVI | GTATCC | 2 cut(s) | 1528, 5098 |
| BclI | TGATCA | 4 cut(s) | 1540, 2131, 3346, 5989 |
| BfoI | RGCGCY | 1 cut(s) | 41 |
| BfuAI | ACCTGC | 2 cut(s) | 1864, 4192 |
| BfuI | GTATCC | 2 cut(s) | 1528, 5098 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 5745 |
| BglII | AGATCT | 5 cut(s) | 395, 959, 1100, 4489, 5239 |
| BlpI | GCTNAGC | 1 cut(s) | 1589 |
| BmcAI | AGTACT | 1 cut(s) | 1074 |
| Bme1390I | CCNGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| Bme18I | GGWCC | 6 cut(s) | 675, 1404, 1652, 2585, 4595, 5441 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 5740 |
| BmgT120I | GGNCC | 7 cut(s) | 675, 1404, 1652, 2585, 3074, 4595, 5441 |
| BmiI | GGNNCC | 8 cut(s) | 615, 1405, 2679, 3487, 5049, 5200, 5443, 6087 |
| BmrFI | CCNGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| BmrI | ACTGGG | 2 cut(s) | 1905, 3489 |
| BmuI | ACTGGG | 2 cut(s) | 1905, 3489 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2775 |
| BpiI | GAAGAC | 4 cut(s) | 3891, 5358, 5466, 6302 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 2984, 3016, 4040, 4072, 4042, 4074, 4820, 4852 |
| BpmI | CTGGAG | 6 cut(s) | 2934, 3597, 4626, 4752, 4934, 5442 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3459, 4092 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1589 |
| Bpu14I | TTCGAA | 2 cut(s) | 5477, 5934 |
| BpuEI | CTTGAG | 3 cut(s) | 3747, 4409, 5905 |
| Bsa29I | ATCGAT | 1 cut(s) | 6342 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1539, 3981 |
| BsaHI | GRCGYC | 1 cut(s) | 3363 |
| BsaI | GGTCTC | 3 cut(s) | 230, 1999, 4462 |
| BsaWI | WCCGGW | 2 cut(s) | 1579, 3529 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 710, 2248, 2436, 2924, 4604, 4742, 5234, 6161 |
| Bse118I | RCCGGY | 2 cut(s) | 772, 3529 |
| Bse3DI | GCAATG | 6 cut(s) | 1600, 2097, 4129, 4474, 5202, 5822 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1539, 3981 |
| BseAI | TCCGGA | 1 cut(s) | 1579 |
| BseBI | CCWGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| BseCI | ATCGAT | 1 cut(s) | 6342 |
| BseJI | GATNNNNATC | 2 cut(s) | 1539, 3981 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 710, 2248, 2436, 2924, 4604, 4742, 5234, 6161 |
| BseMI | GCAATG | 6 cut(s) | 1600, 2097, 4129, 4474, 5202, 5822 |
| BseRI | GAGGAG | 3 cut(s) | 2526, 2529, 5805 |
| BsgI | GTGCAG | 1 cut(s) | 6186 |
| Bsh1236I | CGCG | 1 cut(s) | 14 |
| BshFI | GGCC | 5 cut(s) | 89, 3075, 4254, 4911, 5739 |
| BshNI | GGYRCC | 3 cut(s) | 613, 3485, 5198 |
| BshTI | ACCGGT | 1 cut(s) | 3529 |
| BshVI | ATCGAT | 1 cut(s) | 6342 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3571, 6238 |
| BsiSI | CCGG | 3 cut(s) | 773, 1580, 3530 |
| BslFI | GGGAC | 5 cut(s) | 183, 1417, 1892, 3671, 5427 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 710, 2248, 2436, 2924, 4604, 4742, 5234, 6161 |
| BsmFI | GGGAC | 5 cut(s) | 183, 1417, 1892, 3671, 5427 |
| BsmI | GAATGC | 4 cut(s) | 2092, 2745, 4078, 4563 |
| BsnI | GGCC | 5 cut(s) | 89, 3075, 4254, 4911, 5739 |
| Bso31I | GGTCTC | 3 cut(s) | 230, 1999, 4462 |
| Bsp119I | TTCGAA | 2 cut(s) | 5477, 5934 |
| Bsp1286I | GDGCHC | 2 cut(s) | 3571, 6238 |
| Bsp13I | TCCGGA | 1 cut(s) | 1579 |
| Bsp1407I | TGTACA | 2 cut(s) | 3167, 3208 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1589 |
| Bsp19I | CCATGG | 1 cut(s) | 6009 |
| Bsp68I | TCGCGA | 1 cut(s) | 14 |
| BspACI | CCGC | 6 cut(s) | 632, 1946, 3360, 3915, 4452, 5715 |
| BspANI | GGCC | 5 cut(s) | 89, 3075, 4254, 4911, 5739 |
| BspDI | ATCGAT | 1 cut(s) | 6342 |
| BspEI | TCCGGA | 1 cut(s) | 1579 |
| BspFNI | CGCG | 1 cut(s) | 14 |
| BspLI | GGNNCC | 8 cut(s) | 615, 1405, 2679, 3487, 5049, 5200, 5443, 6087 |
| BspMAI | CTGCAG | 4 cut(s) | 975, 1873, 2416, 4502 |
| BspMI | ACCTGC | 2 cut(s) | 1864, 4192 |
| BspQI | GCTCTTC | 1 cut(s) | 6226 |
| BspT104I | TTCGAA | 2 cut(s) | 5477, 5934 |
| BspT107I | GGYRCC | 3 cut(s) | 613, 3485, 5198 |
| BspTNI | GGTCTC | 3 cut(s) | 230, 1999, 4462 |
| BsrDI | GCAATG | 6 cut(s) | 1600, 2097, 4129, 4474, 5202, 5822 |
| BsrFI | RCCGGY | 2 cut(s) | 772, 3529 |
| BsrGI | TGTACA | 2 cut(s) | 3167, 3208 |
| BssAI | RCCGGY | 2 cut(s) | 772, 3529 |
| BssNI | GRCGYC | 1 cut(s) | 3363 |
| BssT1I | CCWWGG | 6 cut(s) | 201, 1016, 2499, 4818, 5550, 6009 |
| Bst2UI | CCWGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| BstACI | GRCGYC | 1 cut(s) | 3363 |
| BstAUI | TGTACA | 2 cut(s) | 3167, 3208 |
| BstBI | TTCGAA | 2 cut(s) | 5477, 5934 |
| BstC8I | GCNNGC | 7 cut(s) | 36, 2144, 3358, 3705, 5944, 6026, 6432 |
| BstDSI | CCRYGG | 1 cut(s) | 6009 |
| BstFNI | CGCG | 1 cut(s) | 14 |
| BstH2I | RGCGCY | 1 cut(s) | 41 |
| BstHHI | GCGC | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 103, 1865, 2414, 3461, 5501, 5745, 6242 |
| BstNI | CCWGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| BstNSI | RCATGY | 5 cut(s) | 1623, 2066, 2319, 3207, 3621 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2775 |
| BstSCI | CCNGG | 6 cut(s) | 799, 2587, 3653, 4254, 4911, 5908 |
| BstUI | CGCG | 1 cut(s) | 14 |
| BstV2I | GAAGAC | 4 cut(s) | 3891, 5358, 5466, 6302 |
| BstXI | CCANNNNNNTGG | 6 cut(s) | 1684, 3056, 3268, 4682, 4892, 5130 |
| Bsu15I | ATCGAT | 1 cut(s) | 6342 |
| BsuI | GTATCC | 2 cut(s) | 1528, 5098 |
| BsuRI | GGCC | 5 cut(s) | 89, 3075, 4254, 4911, 5739 |
| BsuTUI | ATCGAT | 1 cut(s) | 6342 |
| BtgI | CCRYGG | 1 cut(s) | 6009 |
| BtgZI | GCGATG | 2 cut(s) | 29, 897 |
| BtuMI | TCGCGA | 1 cut(s) | 14 |
| BveI | ACCTGC | 2 cut(s) | 1864, 4192 |
| Cac8I | GCNNGC | 7 cut(s) | 36, 2144, 3358, 3705, 5944, 6026, 6432 |
| CaiI | CAGNNNCTG | 4 cut(s) | 425, 2957, 3077, 4604 |
| CfoI | GCGC | 1 cut(s) | 40 |
| Cfr10I | RCCGGY | 2 cut(s) | 772, 3529 |
| Cfr13I | GGNCC | 7 cut(s) | 675, 1404, 1652, 2585, 3074, 4595, 5441 |
| ClaI | ATCGAT | 1 cut(s) | 6342 |
| CseI | GACGC | 3 cut(s) | 2601, 3352, 6307 |
| CspAI | ACCGGT | 1 cut(s) | 3529 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 855, 890 |
| DraI | TTTAAA | 1 cut(s) | 4416 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 4052, 5144 |
| DriI | GACNNNNNGTC | 1 cut(s) | 5740 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 4052, 5144 |
| EaeI | YGGCCR | 2 cut(s) | 87, 4252 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 5740 |
| Ecl136II | GAGCTC | 1 cut(s) | 6236 |
| Eco130I | CCWWGG | 6 cut(s) | 201, 1016, 2499, 4818, 5550, 6009 |
| Eco147I | AGGCCT | 1 cut(s) | 4911 |
| Eco24I | GRGCYC | 1 cut(s) | 6238 |
| Eco31I | GGTCTC | 3 cut(s) | 230, 1999, 4462 |
| Eco47I | GGWCC | 6 cut(s) | 675, 1404, 1652, 2585, 4595, 5441 |
| Eco47III | AGCGCT | 1 cut(s) | 39 |
| Eco53kI | GAGCTC | 1 cut(s) | 6236 |
| Eco57I | CTGAAG | 9 cut(s) | 759, 1471, 1881, 1926, 3468, 3648, 3903, 4323, 6390 |
| EcoICRI | GAGCTC | 1 cut(s) | 6236 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1404, 3074, 5441 |
| EcoRI | GAATTC | 3 cut(s) | 589, 1039, 4100 |
| EcoRII | CCWGG | 6 cut(s) | 799, 2587, 3653, 4254, 4911, 5908 |
| EcoT14I | CCWWGG | 6 cut(s) | 201, 1016, 2499, 4818, 5550, 6009 |
| EcoT22I | ATGCAT | 4 cut(s) | 1893, 2473, 2700, 4159 |
| EcoT38I | GRGCYC | 1 cut(s) | 6238 |
| ErhI | CCWWGG | 6 cut(s) | 201, 1016, 2499, 4818, 5550, 6009 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1453, 1485 |
| FaqI | GGGAC | 5 cut(s) | 183, 1417, 1892, 3671, 5427 |
| FauI | CCCGC | 1 cut(s) | 4445 |
| FauNDI | CATATG | 4 cut(s) | 1455, 2467, 2700, 5764 |
| FbaI | TGATCA | 4 cut(s) | 1540, 2131, 3346, 5989 |
| FblI | GTMKAC | 1 cut(s) | 3534 |
| FriOI | GRGCYC | 1 cut(s) | 6238 |
| GlaI | GCGC | 1 cut(s) | 39 |
| GsuI | CTGGAG | 6 cut(s) | 2934, 3597, 4626, 4752, 4934, 5442 |
| HaeII | RGCGCY | 1 cut(s) | 41 |
| HaeIII | GGCC | 5 cut(s) | 89, 3075, 4254, 4911, 5739 |
| HapII | CCGG | 3 cut(s) | 773, 1580, 3530 |
| HgaI | GACGC | 3 cut(s) | 2601, 3352, 6307 |
| HhaI | GCGC | 1 cut(s) | 40 |
| Hin1I | GRCGYC | 1 cut(s) | 3363 |
| Hin6I | GCGC | 1 cut(s) | 38 |
| HinP1I | GCGC | 1 cut(s) | 38 |
| HincII | GTYRAC | 4 cut(s) | 2770, 5301, 5324, 6037 |
| HindII | GTYRAC | 4 cut(s) | 2770, 5301, 5324, 6037 |
| HindIII | AAGCTT | 1 cut(s) | 5923 |
| HpaII | CCGG | 3 cut(s) | 773, 1580, 3530 |
| HpyCH4IV | ACGT | 1 cut(s) | 1627 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 103, 1865, 2414, 3461, 5501, 5745, 6242 |
| HpySE526I | ACGT | 1 cut(s) | 1627 |
| Hsp92I | GRCGYC | 1 cut(s) | 3363 |
| HspAI | GCGC | 1 cut(s) | 38 |
| Kpn2I | TCCGGA | 1 cut(s) | 1579 |
| KpnI | GGTACC | 1 cut(s) | 3489 |
| Ksp22I | TGATCA | 4 cut(s) | 1540, 2131, 3346, 5989 |
| LguI | GCTCTTC | 1 cut(s) | 6226 |
| LmnI | GCTCC | 6 cut(s) | 422, 599, 2655, 4799, 5020, 5047 |
| MaeII | ACGT | 1 cut(s) | 1627 |
| MfeI | CAATTG | 5 cut(s) | 525, 1763, 1809, 1878, 3350 |
| MhlI | GDGCHC | 2 cut(s) | 3571, 6238 |
| MlsI | TGGCCA | 1 cut(s) | 4254 |
| MluNI | TGGCCA | 1 cut(s) | 4254 |
| MmeI | TCCRAC | 6 cut(s) | 141, 1147, 1701, 2651, 3285, 3448 |
| Mox20I | TGGCCA | 1 cut(s) | 4254 |
| Mph1103I | ATGCAT | 4 cut(s) | 1893, 2473, 2700, 4159 |
| MroI | TCCGGA | 1 cut(s) | 1579 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1074, 4271 |
| MscI | TGGCCA | 1 cut(s) | 4254 |
| MslI | CAYNNNNRTG | 5 cut(s) | 83, 1365, 2470, 2562, 3163 |
| Msp20I | TGGCCA | 1 cut(s) | 4254 |
| MspA1I | CMGCKG | 3 cut(s) | 632, 1946, 3371 |
| MspI | CCGG | 3 cut(s) | 773, 1580, 3530 |
| MspR9I | CCNGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| MunI | CAATTG | 5 cut(s) | 525, 1763, 1809, 1878, 3350 |
| Mva1269I | GAATGC | 4 cut(s) | 2092, 2745, 4078, 4563 |
| MvaI | CCWGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| MvnI | CGCG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 103, 1865, 2414, 3461, 5501, 5745, 6242 |
| NcoI | CCATGG | 1 cut(s) | 6009 |
| NdeI | CATATG | 4 cut(s) | 1455, 2467, 2700, 5764 |
| NlaIV | GGNNCC | 8 cut(s) | 615, 1405, 2679, 3487, 5049, 5200, 5443, 6087 |
| NmeAIII | GCCGAG | 1 cut(s) | 642 |
| NmuCI | GTSAC | 7 cut(s) | 178, 2423, 2711, 3364, 4508, 4693, 5732 |
| NruI | TCGCGA | 1 cut(s) | 14 |
| NsiI | ATGCAT | 4 cut(s) | 1893, 2473, 2700, 4159 |
| NspI | RCATGY | 5 cut(s) | 1623, 2066, 2319, 3207, 3621 |
| NspV | TTCGAA | 2 cut(s) | 5477, 5934 |
| PceI | AGGCCT | 1 cut(s) | 4911 |
| PciI | ACATGT | 1 cut(s) | 3617 |
| PciSI | GCTCTTC | 1 cut(s) | 6226 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1633 |
| PctI | GAATGC | 4 cut(s) | 2092, 2745, 4078, 4563 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1074, 4271 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 4604, 5234, 6161 |
| PfoI | TCCNGGA | 1 cut(s) | 2587 |
| PinAI | ACCGGT | 1 cut(s) | 3529 |
| PpuMI | RGGWCCY | 2 cut(s) | 1404, 5441 |
| PscI | ACATGT | 1 cut(s) | 3617 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2775 |
| PshBI | ATTAAT | 3 cut(s) | 1449, 2352, 3395 |
| PsiI | TTATAA | 1 cut(s) | 893 |
| Psp124BI | GAGCTC | 1 cut(s) | 6238 |
| Psp5II | RGGWCCY | 2 cut(s) | 1404, 5441 |
| Psp6I | CCWGG | 6 cut(s) | 799, 2587, 3653, 4254, 4911, 5908 |
| PspGI | CCWGG | 6 cut(s) | 799, 2587, 3653, 4254, 4911, 5908 |
| PspN4I | GGNNCC | 8 cut(s) | 615, 1405, 2679, 3487, 5049, 5200, 5443, 6087 |
| PspPI | GGNCC | 7 cut(s) | 675, 1404, 1652, 2585, 3074, 4595, 5441 |
| PspPPI | RGGWCCY | 2 cut(s) | 1404, 5441 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1617, 1649, 3201, 3233 |
| PstI | CTGCAG | 4 cut(s) | 975, 1873, 2416, 4502 |
| PstNI | CAGNNNCTG | 4 cut(s) | 425, 2957, 3077, 4604 |
| PvuII | CAGCTG | 1 cut(s) | 3371 |
| RruI | TCGCGA | 1 cut(s) | 14 |
| RseI | CAYNNNNRTG | 5 cut(s) | 83, 1365, 2470, 2562, 3163 |
| SacI | GAGCTC | 1 cut(s) | 6238 |
| SapI | GCTCTTC | 1 cut(s) | 6226 |
| Sau96I | GGNCC | 7 cut(s) | 675, 1404, 1652, 2585, 3074, 4595, 5441 |
| ScaI | AGTACT | 1 cut(s) | 1074 |
| ScrFI | CCNGG | 6 cut(s) | 801, 2589, 3655, 4256, 4913, 5910 |
| SduI | GDGCHC | 2 cut(s) | 3571, 6238 |
| SfuI | TTCGAA | 2 cut(s) | 5477, 5934 |
| SinI | GGWCC | 6 cut(s) | 675, 1404, 1652, 2585, 4595, 5441 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 83, 1365, 2470, 2562, 3163 |
| SmlI | CTYRAG | 3 cut(s) | 3762, 4388, 5920 |
| SmoI | CTYRAG | 3 cut(s) | 3762, 4388, 5920 |
| SseBI | AGGCCT | 1 cut(s) | 4911 |
| SsiI | CCGC | 6 cut(s) | 632, 1946, 3360, 3915, 4452, 5715 |
| SspI | AATATT | 4 cut(s) | 2118, 3199, 3595, 4681 |
| SstI | GAGCTC | 1 cut(s) | 6238 |
| StuI | AGGCCT | 1 cut(s) | 4911 |
| StyD4I | CCNGG | 6 cut(s) | 799, 2587, 3653, 4254, 4911, 5908 |
| StyI | CCWWGG | 6 cut(s) | 201, 1016, 2499, 4818, 5550, 6009 |
| TaiI | ACGT | 1 cut(s) | 1630 |
| TaqII | GACCGA | 1 cut(s) | 3210 |
| TatI | WGTACW | 7 cut(s) | 1072, 1177, 2845, 3167, 3208, 3686, 5599 |
| TauI | GCSGC | 1 cut(s) | 3363 |
| TseFI | GTSAC | 7 cut(s) | 178, 2423, 2711, 3364, 4508, 4693, 5732 |
| Tsp45I | GTSAC | 7 cut(s) | 178, 2423, 2711, 3364, 4508, 4693, 5732 |
| TspGWI | ACGGA | 5 cut(s) | 1361, 2741, 2811, 3045, 3709 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 4604, 5234, 6161 |
| VpaK11BI | GGWCC | 6 cut(s) | 675, 1404, 1652, 2585, 4595, 5441 |
| VspI | ATTAAT | 3 cut(s) | 1449, 2352, 3395 |
| XbaI | TCTAGA | 3 cut(s) | 1847, 2779, 6238 |
| XceI | RCATGY | 5 cut(s) | 1623, 2066, 2319, 3207, 3621 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4375 |
| XmiI | GTMKAC | 1 cut(s) | 3534 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1074, 4271 |
| ZrmI | AGTACT | 1 cut(s) | 1074 |
| Zsp2I | ATGCAT | 4 cut(s) | 1893, 2473, 2700, 4159 |