Rroxscaffold_7G00193840

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
35383148 .. 35394264
11117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00193840.1

Sequence Viewer

Length: 6738 bp
ATGGATTTCTACGAGATGAAGAGGAAGGAGCTGCAAGCGCTGTGCAAGAAGCACGGGATTCGTGCCAATATGAAGAACACAGAAATGGCCGAAAGGCTTACCTTGCTTCTTAAGGAAGATGAAAAATCTATAACAGAAGTTAAGCAGGTGGAGAAACAGTTGGAAGCAACTGAAATGGTGATTGATTCGGCTGAAAGTCAGAAAGTTAAGAAAGTGAAGTTCAGTCCTGACAATGAAACCTTTTACTTTGTGGCTACTGACAAAGACTCGGACTCGGATTGTGAGTACAAACCAAAGAAGCGGGGCGGAAGAAGGAAGTCTATGGGGAAGAAGGTGTTGGAGAAGAAGGAAGTTTTGGATGTGGTTGAAAATGCAAGAGAAGTTGAAGTAGTGGAAATTAAGGACACCCCTGTTAGTGTTACGAGGTCTCAAAAGCAAAAGATGGTTGCAGGAGCTGTGGAGTCGGTTTTTTCACCTGGTCATGGGCAAAAGAAAGTGATAATTGGTGCGGAATATGTTGATGGGAAAGGCATTAAACCTGTAAGAGTCCAGAAGGAATGTAAAGCAGTTGTGCTCCACAAGGGAAAGGAGGTTGCAAGAGATGATGCTAGAAAAAGAACAAGGGACGAAAATACAGAAGGCGCTTCCCAAGTGGTGCCAAGTGAAGTTCTCTCACCTAAACCTCCTTTAAGGAGGTCCAGACGAAAAACCACATTTTCTTCCGTGGCTTGTGCTGAGAAGGAGTTGGGAATTTGTGAAGCTGTTGAGACCGTGAAACTAGCAAGAAAGCCGGTTACTAGAAAGAGTTCGAATGCTGCTAAACCTGGAAGGAAGTCTGGTAGGGATGCTTGTAAAAAGGTACAAGCAGAAACCTGTGATGACATAACTGCAACTGCTGTGGAAATGGATGGGCTTATGCAGGAAATCCAAGAGCCGTCACTGATAGAGGACAGTTCATTAGTTGTGTACGAGTCATTAGATAGATCTCCAGTGCTGCAGATGGGCGAGGAACTGGAAAGAGATGTTACTAGAAAAAGGCCAAGGAATAAAGACTTTGGAGGGAATTCCAAAGTTGAGCCAGGTTTGGAAAATGTACTTCCACCGAAGGCTCGTTCAAGGAGATCTAATAGCAAGACTGCATTATTGACAGAAAGTATGCCTGCTGAAAATAATTCACCACTTGAAGAACCAAAGATAGATGTTGGATTGGAAATACAGGAACCTGCAGGAAATGAAAATGAAACTGATTCTTGTTTCAACAAAGCTGTAGAAAATTCAAGAAAGAAGAGGAAGGGATCAAGCAAGAAGACAGAATCTGCCACAAAGGATCAGCATGTTAGTTTGGCAGTATCTACTGTATATTCGGACATTGAGAAAACCACGGATATTTTGGCTCATCTGAACGGAAATCGGGTTGTGGAATCTGTGAACTTTCAAGGGACCTCTATGTTACATAAGGAACAGAATGCTGCTCAACCCATCATTAATCATATTGAAAGTGTTTCTGTAGAAGATGCCATCTTCAGTAACTCTACTGTGGGTGTTATGGATGATCCTTGTTTGTCTTTTAACAGAAAGGATACTGATCAAGAAAACACAGTTGAACAAAACCCAGTAGCATCTCCGGATAATCTCTGCAGTGTGGTGGTTTCTCCAAACGCCTGTGTGCGTGATGTTCATTCATTCACCTATCGATCAGAATGTGAAGGTCAAACTTCCAACTTATTGGACTTGAATGAAGGATCAGAATCAGAAGAGTCATTGATTGTTAAATCCATTAGTCGAAGAGGTGGTGTGCTGGATGATCAATCGGCAAACGGGGTCATAGCTAGTGTTTCCGAGGATCAGAAATCACTTGACAAAATAGTGATGGTTCAAGTTGATATGGATTCTAAAAAACCTGCTGAAGCTGCTGCAGAGACGGTTGGAGAAATGGATCTGGGTAGTACCGTTCCCTGTGATACAACTCCAATAGATTCTTCACTGGTAAAGCAAGTTGGGAATGAGTTTCAAGCTCAATGCGCTCTTGTTGGAGGAATAAATATAAAACATATTGGAACAAAATTCTCTTCTACATGTGTGTCTGAAGTCCCTGATGAAACAACATCTTCCTGGAATGAAGAGATACTATGTAATCATGATAGTACAAAAGAAGTTATGCCAACAGATAATGAATCTGCTAAGGCATTAGATAGTGCCCAAATGATACCAATTGTTACTGAAGAGGTTCTTCATCAGGCTATTGAAAGAAACTCAAATTTTGATGAAAGTGTTCTTCTGGATTCACATAACACAGATGGTCAGGTTGCTGAAGTTAAATTTCCTGAAATCTCAGATGTTACTGAAGACATTGAAGAGAAATATGAGAATGAATCCTCTTATGGTGAGAGGACGGAAGAAGTTGTGCCAACCGATAATGAATCTGTTGAGGAATTAGATATTGCTCAAACTTTACCAACTGGTATTGACGAGGTAAATGTGGGTATTGAAAAAAGCTCAAACTTGGATGAGAGTGCCCTTCCTGATTCAAACAACACAGATGGTCAGGTTGCTGAGGATAAATTCTCGAACGAAAGCATTGTCAATGCCAGTGAAGAAATTAAAGAGAAATGTGAGCATGAATCCTCAAATGGTGATAGAAGTCCAATCACCCTAGCAGAAAGGATAATGGATAAAGTTGAAAGTACAATCCCTGTAGTTTTAAAATCTGATGGTGATGGCCAAAACTCATCTTCCTGTGGGGTCTCTTGTAGCAATGATGAATATGAACAAGGGAACAAACTTAAAGCTCAAGGCATACATCTCTGTGAAGAAGTTGAGGGTTTGTTGCATGGAAGCAAGTACCAGAATTTATCTTTTGATGGGAAAATAGTTGTGAATGATCACATAGCGGCACTCACTATGAATTCAAATCTTGAATGTGTGATGGATGCTGTGGAGGTTGAAAATGAGAGAAAATCTTTGAAAGGTCTGGATATAGTGGTGTCTGTAGAGAGTGAAGGTGTAGTGAGAACATCACAATCTGCTCTCCCACTGGATTGCATGAACACTGGTGATTCTGACTTGCATAGGGAAGGAAAGGCTTCATTTGCTACAGATGAACAGACATACAAGGATGAAAATGCTAGCATTAGTGATAATATCAGGACCCTTGGTGGGGCTATTGAGAACAGAATGATGGGGAGCAAAGCTGATATGGAGGACTATGTCACTTATAGAGAAAATAATAATATTGGCAACTGCTTGACTGAAGGAGATCGATACTGCAGCAAGGGTGACAAAAACAATCAGAAAGAAAAGGAGATTGTTGATGAGGATCTAGGAGATCGATACTGCAGCAAGGGTGACAAAAACAATCCGAAAGAAAAGGAGAATGTTGATGAGGATCTAGACGATGAGTGTCTTGATGTGAATGCAGCTTTTCAAGAAAATGAGGAAAATAAAGACGGGGTCTGTAAAGTTGAAGAAATGTTGGATGCTATGCCTGATTTGAGTATGGATAAAAACGCAACTTCCAAGGAACATGGTCAAGAACTACTTGATATCCAGAAAGGGGTTGCTGAACAAGATGTAGGTGAAAATTCTGATGGGCAAGTGGAGGTTAAGCACAGTGAGAATGCAATAGATGCTGGGGACGGCAAAGACATACTTGAAAAATGTGGTCAACGTGCCGAAGAGTCGATTTTGGAAGATAATGAAAGACTAACAGAGCAGGACATTGTATCTGTTATGATACAAGAGCATGTAGATGGCGAGAAAGAAAGGAATGAATATTTAGAGGTCAAGAATCCTAATGTATCCATCCACGAAGAAAGCTTTTCTGAAACTGTTACAGATCAGATCGCAAATGAAGTTATAGAATTCGAATCACAAGATAAAGTAAACCTTGGAAGTCCTGACAACTGCAAACAAATATCCTCAGAGGTGGAAAAATGTGTTTCTGCAGCTTCAAGTGACTCCATATCTATGGATGACAAAACTGCAGAAAGGATAGCATATGCATGGAAGATGGGTGAAGATTCAAGTTCTAAGGATATCCGAGGAGGAGAAAGCCTTTCTTTTTCCATCATCTCTGATGGCCATAGACACAATAATGATGCAGCAGACATAACTGGTCCTGGAGGCATGGAAGTTAGTAAGGAGAATAATGTGGATGGAACTAAGATGGTTGAGCAAAAACTGAATGGTGGCAGTCTGTTGGAAGCAAGGAGCACGTCAGATGTGAAATCATTTTCTGATGTCTCTTGGAACAGGCTTGAGTGCGACCTTGGTTATTCTTTGCACGATGCTGTAGTCTCATGCAAGGATCTTGAAAGGAAGAATATGCATATGCTAGTTGGTGACAATGCTAGCACAGATGGATTCGGAATGCTGGAAAGTGTCTCAGGTGAGAAGGTTGATGAAGGTTTAGATACTGGCATATATGGTCTTGAGGAAGAAAACCACACACTAAATTCCAAAGAGACTGAGGAAATACTTGATCTCCATAATATTGGTACTGTGGCCACCTGTTCTGCTGATTCCACCAAACCCTCAATGCTAAAACCTGAAATGGGTGTTGATTCTCCAGTTTCTGCTTCTACTTATGAAAACAAAGCCTTGGAATTAGAGGCTGCTTCACCCATATTGAATAGTTTTGGGATGAAAGGACTTTTCAAAGATGACCAAACTTCTGGACTTGAAAAAGCTGATTCCACCGAACCCTCTATGCTAAAATCTGAAATGGGTGTTGATTCTCCAGTTTCTGCTTCTAATTATGAAAACAAAGCCTTGGAATTAGAGGCTGCCTCACCCATATTGAATAGTTTTGGGATGAAACAACTTTTCACAGATGACCAAACTTCTGGACTTGAAAAAGCTGATTCCACCGAACCCTCTATGCTAAAATCTGAAATGGGTGTTGATTCTCCAGTTTCTGCTTCTAATTATGAAAACAAAGCCTTGGAATTAGAGGCTGCCTCACCCATATTGACTAGTTTTGGGATGAAACAACTTTTCACAGATGACCAAACTGCTGGACTCGAAGAATCAGGTCTCGAGATGTTGAAAGGCCATTCAAAGAGTGAATATATTGAGGATGTGAATAATTTAAAAGAAAGTATTGATAATTTACAAGTTGTAGAGGAACTTCATCATCAGGAGAATAAAGTGATCGGGGAAGTTGTGGAGTCAAAATTCGCTCAGGAAATGTATAACCATTGCCTTACTGGTTCTGCTATTATGGATACTAATGCGCATATTCCAAGTGTTTGGGATGAGTCAACAGAAGTAAAACCATGCCTTGATAATGCTTGTGCCAAACCTCAAACATGTAATGCTGCTGCCATTGCCTCAGAGTTTAATGTTTCTTCATCTCTTGGAGATCTATGTGAATTAAAAGAGTTTAGTAAGGCTGACAGTGAAAGTGCAAAAGAAAAGGTGGCGACTGATGATTGTTTGGGAGATCAACCATCAGAAAATTTGAGAGTTTCGGAAGACCTAGAAGCTCATACAATGATAAGTAACGTAATGGTGATAAAGCAGGAAGAAGATGCAAATTCTTTGCTATCATTTGGTTATGTAGGTGCCAAAACAGTGTCTCCAGAAAAAGTGGTTGGGTGTTTGGAAAATATGGCTGCTGGTATTGAGGCTTCAAATCTGAGATTAAATGAAGCACCAAGTTCCAAGGATTCTACTTTTGATGAACAGAGTAAATGCAATCTTTGTGATGATGTACTGGTTGATGGCAGTAGAGACAATAATGCTGTTGCAGATAAAGTTAGTACTGGAAGTATGGAAGCAATAATTGGTGTTAAGAATGTTGGTGATGGAATTAAGTCAGTAGAAAAAAACCCGCAACCATTGGAAGGTGACCAACTTTCAGAAGAAAGAGACTCTTCATATGGCAAATCATTTTCTGATATTTCTCATAGCAGGAGTGAAGGTGATTCTACTTTCTCCTTGCACAATGTTCCATTCTGTTGTGAGTATCTTTGCTCTGTGCCTTTTGCTCTTCTAATTGCATTTTATCTGCCAATGAATGATCTGAACAAACTCTTCTTCCTATGTGAAAATGGCGGTGTTTTCAAAAAGAGACATCTGTCTGTGCAAGAAGGTAGAGGCTTGAAGGCAGGAAGAGTCTCAGGCTTGAAGTTCGAATGTGTAAATGCTGGTATAGATGGTTTTGCTGATGCTCCTGCTACTGCTTCAAGGCATGATCAAACAGAAATTAAGGCCTTGGAGAATGTAGCCTCGCCTGTAGTCAACAGTCTTGGGATGGATTGGCTTTTTGGAGACAATGATGAAGTTGAGAAATCAGATGTAGAGATGTCAAATGCCAATTCAACTAGTGAAGATGTTAAGAATGGGAATGGAGGTGTAGCTATTCCACAAGTTGGTGCAGGGGAACTTGGAGAGCATAAGCATCAACCAATAGAAGTTGGGAAGCTGAAATCCACTCAGGAATTGGGTATTCATTGCCGCCCATGTTCTCCTGTTACAGAGATCTCTAGTCATGCAAAACTGGATTCATTCAGAGAGAAAGCTCTGGAGGCAAATTTGGAGAGAAGTATTAGTGTTTCTACTACACCTAGACGGAAGAACAGAGATATTTTCATCCCTAGAACTCCAAAGAATCTTATCAATAAGTCTGATATGAAGGAAAACTTCAATGCCAGAAAGAGTGAACCAGTAACAAACATCAGTTCAGTGAAACATCTGCATAGCAGGCGGGCACTGCAGGATCTCCAAAATAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2245

Amino Acids

245.63

Weight (kDa)

4.66

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 136
Acc16I TGCGCA 1 cut(s) 5235
Acc36I ACCTGC 3 cut(s) 136, 1231, 1909
AccB1I GGYRCC 2 cut(s) 655, 5564
AccB7I CCANNNNNTGG 1 cut(s) 6374
AccIII TCCGGA 1 cut(s) 1624
AciI CCGC 8 cut(s) 301, 306, 509, 2891, 5834, 6057, 6460, 6709
AcoI YGGCCR 4 cut(s) 87, 2719, 4078, 4503
AcuI CTGAAG 7 cut(s) 1507, 1926, 2106, 2241, 2331, 2364, 3270
AfeI AGCGCT 1 cut(s) 39
AfiI CCNNNNNNNGG 7 cut(s) 482, 3156, 3157, 3553, 4553, 5846, 6374
AflII CTTAAG 1 cut(s) 110
AflIII ACRYGT 2 cut(s) 2075, 5309
AhlI ACTAGT 2 cut(s) 4973, 6326
AjiI CACGTC 1 cut(s) 4215
AjnI CCWGG 5 cut(s) 475, 823, 1078, 2111, 4117
Alw21I GWGCWC 2 cut(s) 576, 4214
AlwNI CAGNNNCTG 5 cut(s) 455, 1316, 4574, 4745, 4916
Ama87I CYCGRG 1 cut(s) 5036
Aor13HI TCCGGA 1 cut(s) 1624
Aor51HI AGCGCT 1 cut(s) 39
AoxI GGCC 7 cut(s) 87, 1037, 2719, 4078, 4503, 5050, 6213
ArsI GACNNNNNNTTYG 2 cut(s) 2565, 2597
AseI ATTAAT 1 cut(s) 1485
Asp700I GAANNNNTTC 4 cut(s) 805, 2226, 2271, 3082
AspLEI GCGC 4 cut(s) 40, 644, 2024, 5236
AspS9I GGNCC 4 cut(s) 696, 1440, 3147, 4115
AsuII TTCGAA 3 cut(s) 809, 3864, 6135
AsuNHI GCTAGC 2 cut(s) 3125, 4349
AvaI CYCGRG 1 cut(s) 5036
AvaII GGWCC 4 cut(s) 696, 1440, 3147, 4115
BaeGI GKGCMC 3 cut(s) 2200, 2518, 6715
BalI TGGCCA 3 cut(s) 2721, 4080, 4505
BanI GGYRCC 2 cut(s) 655, 5564
BarI GAAGNNNNNNTAC 4 cut(s) 5112, 5144, 5614, 5646
BbsI GAAGAC 3 cut(s) 1313, 2352, 5481
Bbv12I GWGCWC 2 cut(s) 576, 4214
BbvCI CCTCAGC 1 cut(s) 2553
BceAI ACGGC 2 cut(s) 919, 3652
BcgI CGANNNNNNTGC 2 cut(s) 41, 75
BciT130I CCWGG 5 cut(s) 477, 825, 1080, 2113, 4119
BciVI GTATCC 3 cut(s) 1573, 3808, 5218
BclI TGATCA 4 cut(s) 1585, 1804, 2881, 6196
BcuI ACTAGT 2 cut(s) 4973, 6326
BfoI RGCGCY 2 cut(s) 41, 645
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 3 cut(s) 136, 1231, 1909
BfuI GTATCC 3 cut(s) 1573, 3808, 5218
BglII AGATCT 4 cut(s) 983, 1121, 5362, 6483
BmcAI AGTACT 1 cut(s) 5764
Bme1390I CCNGG 5 cut(s) 477, 825, 1080, 2113, 4119
Bme18I GGWCC 4 cut(s) 696, 1440, 3147, 4115
BmeT110I CYCGRG 1 cut(s) 5036
BmgBI CACGTC 1 cut(s) 4215
BmgT120I GGNCC 4 cut(s) 696, 1440, 3147, 4115
BmiI GGNNCC 5 cut(s) 657, 1221, 1441, 3149, 5566
BmrFI CCNGG 5 cut(s) 477, 825, 1080, 2113, 4119
BmrI ACTGGG 1 cut(s) 1607
BmtI GCTAGC 2 cut(s) 3129, 4353
BmuI ACTGGG 1 cut(s) 1607
BoxI GACNNNNGTC 1 cut(s) 6079
BpiI GAAGAC 3 cut(s) 1313, 2352, 5481
BplI GAGNNNNNCTC 4 cut(s) 4772, 4804, 4943, 4975
BpmI CTGGAG 7 cut(s) 972, 4140, 4551, 4722, 4893, 5565, 6548
Bpu10I CCTNAGC 3 cut(s) 2181, 2553, 5181
Bpu14I TTCGAA 3 cut(s) 809, 3864, 6135
BpuEI CTTGAG 3 cut(s) 2775, 4277, 4451
Bsa29I ATCGAT 3 cut(s) 1693, 3259, 3328
BsaBI GATNNNNATC 4 cut(s) 1584, 1747, 3315, 3384
BsaI GGTCTC 4 cut(s) 432, 761, 2749, 5039
BsaWI WCCGGW 1 cut(s) 1624
BsaXI ACNNNNNCTCC 8 cut(s) 143, 173, 4467, 4497, 5563, 5593, 5908, 5938
Bsc4I CCNNNNNNNGG 7 cut(s) 482, 3156, 3157, 3553, 4553, 5846, 6374
Bse118I RCCGGY 1 cut(s) 790
Bse3DI GCAATG 4 cut(s) 2761, 5197, 5325, 6454
Bse8I GATNNNNATC 4 cut(s) 1584, 1747, 3315, 3384
BseAI TCCGGA 1 cut(s) 1624
BseBI CCWGG 5 cut(s) 477, 825, 1080, 2113, 4119
BseCI ATCGAT 3 cut(s) 1693, 3259, 3328
BseJI GATNNNNATC 4 cut(s) 1584, 1747, 3315, 3384
BseLI CCNNNNNNNGG 7 cut(s) 482, 3156, 3157, 3553, 4553, 5846, 6374
BseMI GCAATG 4 cut(s) 2761, 5197, 5325, 6454
BseRI GAGGAG 2 cut(s) 4056, 4059
BseSI GKGCMC 3 cut(s) 2200, 2518, 6715
BseYI CCCAGC 1 cut(s) 3629
BsgI GTGCAG 1 cut(s) 6399
BshFI GGCC 7 cut(s) 89, 1039, 2721, 4080, 4505, 5052, 6215
BshNI GGYRCC 2 cut(s) 655, 5564
BshVI ATCGAT 3 cut(s) 1693, 3259, 3328
BsiHKAI GWGCWC 2 cut(s) 576, 4214
BsiHKCI CYCGRG 1 cut(s) 5036
BsiSI CCGG 2 cut(s) 791, 1625
BslFI GGGAC 4 cut(s) 638, 1453, 2075, 3647
BslI CCNNNNNNNGG 7 cut(s) 482, 3156, 3157, 3553, 4553, 5846, 6374
BsmBI CGTCTC 1 cut(s) 1913
BsmFI GGGAC 4 cut(s) 638, 1453, 2075, 3647
BsmI GAATGC 5 cut(s) 817, 1471, 3418, 3622, 4374
BsnI GGCC 7 cut(s) 89, 1039, 2721, 4080, 4505, 5052, 6215
Bso31I GGTCTC 4 cut(s) 432, 761, 2749, 5039
BsoBI CYCGRG 1 cut(s) 5036
Bsp119I TTCGAA 3 cut(s) 809, 3864, 6135
Bsp1286I GDGCHC 5 cut(s) 576, 2200, 2518, 4214, 6715
Bsp13I TCCGGA 1 cut(s) 1624
BspACI CCGC 8 cut(s) 301, 306, 509, 2891, 5834, 6057, 6460, 6709
BspANI GGCC 7 cut(s) 89, 1039, 2721, 4080, 4505, 5052, 6215
BspDI ATCGAT 3 cut(s) 1693, 3259, 3328
BspEI TCCGGA 1 cut(s) 1624
BspHI TCATGA 1 cut(s) 2137
BspLI GGNNCC 5 cut(s) 657, 1221, 1441, 3149, 5566
BspMAI CTGCAG 9 cut(s) 999, 1228, 1640, 1918, 3269, 3338, 3946, 3985, 6720
BspMI ACCTGC 3 cut(s) 136, 1231, 1909
BspOI GCTAGC 2 cut(s) 3129, 4353
BspQI GCTCTTC 1 cut(s) 5997
BspT104I TTCGAA 3 cut(s) 809, 3864, 6135
BspT107I GGYRCC 2 cut(s) 655, 5564
BspTI CTTAAG 1 cut(s) 110
BspTNI GGTCTC 4 cut(s) 432, 761, 2749, 5039
BsrDI GCAATG 4 cut(s) 2761, 5197, 5325, 6454
BsrFI RCCGGY 1 cut(s) 790
BssAI RCCGGY 1 cut(s) 790
Bst2UI CCWGG 5 cut(s) 477, 825, 1080, 2113, 4119
BstAFI CTTAAG 1 cut(s) 110
BstAPI GCANNNNNTGC 1 cut(s) 3626
BstBI TTCGAA 3 cut(s) 809, 3864, 6135
BstC8I GCNNGC 6 cut(s) 36, 1161, 3127, 4351, 6707, 6711
BstDSI CCRYGG 2 cut(s) 723, 1380
BstEII GGTNACC 1 cut(s) 5849
BstH2I RGCGCY 2 cut(s) 41, 645
BstHHI GCGC 4 cut(s) 40, 644, 2024, 5236
BstNI CCWGG 5 cut(s) 477, 825, 1080, 2113, 4119
BstNSI RCATGY 4 cut(s) 1337, 2079, 3746, 5313
BstPAI GACNNNNGTC 1 cut(s) 6079
BstPI GGTNACC 1 cut(s) 5849
BstSCI CCNGG 5 cut(s) 475, 823, 1078, 2111, 4117
BstSLI GKGCMC 3 cut(s) 2200, 2518, 6715
BstV2I GAAGAC 3 cut(s) 1313, 2352, 5481
BstX2I RGATCY 9 cut(s) 983, 1121, 1936, 3316, 3385, 4306, 5362, 6483, 6721
BstXI CCANNNNNNTGG 7 cut(s) 1726, 3967, 4493, 4673, 4844, 5015, 5250
BstYI RGATCY 9 cut(s) 983, 1121, 1936, 3316, 3385, 4306, 5362, 6483, 6721
Bsu15I ATCGAT 3 cut(s) 1693, 3259, 3328
BsuI GTATCC 3 cut(s) 1573, 3808, 5218
BsuRI GGCC 7 cut(s) 89, 1039, 2721, 4080, 4505, 5052, 6215
BsuTUI ATCGAT 3 cut(s) 1693, 3259, 3328
BtgI CCRYGG 2 cut(s) 723, 1380
BtrI CACGTC 1 cut(s) 4215
BtsI GCAGTG 2 cut(s) 1645, 6713
BveI ACCTGC 3 cut(s) 136, 1231, 1909
Cac8I GCNNGC 6 cut(s) 36, 1161, 3127, 4351, 6707, 6711
CaiI CAGNNNCTG 5 cut(s) 455, 1316, 4574, 4745, 4916
CciI TCATGA 1 cut(s) 2137
CfoI GCGC 4 cut(s) 40, 644, 2024, 5236
Cfr10I RCCGGY 1 cut(s) 790
Cfr13I GGNCC 4 cut(s) 696, 1440, 3147, 4115
ClaI ATCGAT 3 cut(s) 1693, 3259, 3328
CsiI ACCWGGT 1 cut(s) 475
CspCI CAANNNNNGTGG 2 cut(s) 879, 914
DraI TTTAAA 2 cut(s) 2703, 5091
EaeI YGGCCR 4 cut(s) 87, 2719, 4078, 4503
EciI GGCGGA 1 cut(s) 321
Eco147I AGGCCT 1 cut(s) 6215
Eco31I GGTCTC 4 cut(s) 432, 761, 2749, 5039
Eco32I GATATC 2 cut(s) 3544, 4036
Eco47I GGWCC 4 cut(s) 696, 1440, 3147, 4115
Eco47III AGCGCT 1 cut(s) 39
Eco57I CTGAAG 7 cut(s) 1507, 1926, 2106, 2241, 2331, 2364, 3270
Eco88I CYCGRG 1 cut(s) 5036
Eco91I GGTNACC 1 cut(s) 5849
EcoO109I RGGNCCY 2 cut(s) 1440, 3147
EcoO65I GGTNACC 1 cut(s) 5849
EcoRI GAATTC 3 cut(s) 1063, 2905, 3860
EcoRII CCWGG 5 cut(s) 475, 823, 1078, 2111, 4117
EcoRV GATATC 2 cut(s) 3544, 4036
EcoT22I ATGCAT 2 cut(s) 4003, 4329
Esp3I CGTCTC 1 cut(s) 1913
FaqI GGGAC 4 cut(s) 638, 1453, 2075, 3647
FauI CCCGC 3 cut(s) 294, 5841, 6702
FauNDI CATATG 3 cut(s) 3997, 4329, 5881
FbaI TGATCA 4 cut(s) 1585, 1804, 2881, 6196
FspAI RTGCGCAY 1 cut(s) 5235
FspI TGCGCA 1 cut(s) 5235
GlaI GCGC 4 cut(s) 39, 643, 2023, 5235
GsaI CCCAGC 1 cut(s) 3633
GsuI CTGGAG 7 cut(s) 972, 4140, 4551, 4722, 4893, 5565, 6548
HaeII RGCGCY 2 cut(s) 41, 645
HaeIII GGCC 7 cut(s) 89, 1039, 2721, 4080, 4505, 5052, 6215
HapII CCGG 2 cut(s) 791, 1625
HhaI GCGC 4 cut(s) 40, 644, 2024, 5236
Hin6I GCGC 4 cut(s) 38, 642, 2022, 5234
HinP1I GCGC 4 cut(s) 38, 642, 2022, 5234
HincII GTYRAC 3 cut(s) 3665, 5262, 6244
HindII GTYRAC 3 cut(s) 3665, 5262, 6244
HindIII AAGCTT 1 cut(s) 3814
HpaII CCGG 2 cut(s) 791, 1625
Hpy166II GTNNAC 7 cut(s) 967, 1429, 3665, 3883, 5262, 6244, 6665
Hpy8I GTNNAC 7 cut(s) 967, 1429, 3665, 3883, 5262, 6244, 6665
HpyCH4IV ACGT 3 cut(s) 3667, 4214, 5505
HpySE526I ACGT 3 cut(s) 3667, 4214, 5505
HspAI GCGC 4 cut(s) 38, 642, 2022, 5234
Kpn2I TCCGGA 1 cut(s) 1624
Ksp22I TGATCA 4 cut(s) 1585, 1804, 2881, 6196
LguI GCTCTTC 1 cut(s) 5997
LmnI GCTCC 6 cut(s) 28, 452, 579, 3183, 4209, 6178
MabI ACCWGGT 1 cut(s) 475
MaeII ACGT 3 cut(s) 3667, 4214, 5505
MfeI CAATTG 1 cut(s) 2211
MflI RGATCY 9 cut(s) 983, 1121, 1936, 3316, 3385, 4306, 5362, 6483, 6721
MhlI GDGCHC 5 cut(s) 576, 2200, 2518, 4214, 6715
MlsI TGGCCA 3 cut(s) 2721, 4080, 4505
MluNI TGGCCA 3 cut(s) 2721, 4080, 4505
MmeI TCCRAC 8 cut(s) 141, 318, 1183, 1743, 1906, 2011, 3453, 4179
Mox20I TGGCCA 3 cut(s) 2721, 4080, 4505
Mph1103I ATGCAT 2 cut(s) 4003, 4329
MroI TCCGGA 1 cut(s) 1624
MroXI GAANNNNTTC 4 cut(s) 805, 2226, 2271, 3082
MscI TGGCCA 3 cut(s) 2721, 4080, 4505
MslI CAYNNNNRTG 6 cut(s) 83, 2805, 3747, 3965, 4000, 4092
Msp20I TGGCCA 3 cut(s) 2721, 4080, 4505
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 2 cut(s) 791, 1625
MspR9I CCNGG 5 cut(s) 477, 825, 1080, 2113, 4119
MunI CAATTG 1 cut(s) 2211
Mva1269I GAATGC 5 cut(s) 817, 1471, 3418, 3622, 4374
MvaI CCWGG 5 cut(s) 477, 825, 1080, 2113, 4119
NdeI CATATG 3 cut(s) 3997, 4329, 5881
NheI GCTAGC 2 cut(s) 3125, 4349
NlaIV GGNNCC 5 cut(s) 657, 1221, 1441, 3149, 5566
NmuCI GTSAC 7 cut(s) 936, 3208, 3275, 3344, 3953, 4340, 5849
NsbI TGCGCA 1 cut(s) 5235
NsiI ATGCAT 2 cut(s) 4003, 4329
NspI RCATGY 4 cut(s) 1337, 2079, 3746, 5313
NspV TTCGAA 3 cut(s) 809, 3864, 6135
PaeR7I CTCGAG 1 cut(s) 5036
PagI TCATGA 1 cut(s) 2137
PaqCI CACCTGC 1 cut(s) 136
PceI AGGCCT 1 cut(s) 6215
PciI ACATGT 2 cut(s) 2075, 5309
PciSI GCTCTTC 1 cut(s) 5997
PctI GAATGC 5 cut(s) 817, 1471, 3418, 3622, 4374
PdmI GAANNNNTTC 4 cut(s) 805, 2226, 2271, 3082
PflFI GACNNNGTC 2 cut(s) 3206, 3449
PflMI CCANNNNNTGG 1 cut(s) 6374
PfoI TCCNGGA 2 cut(s) 2111, 4117
PpuMI RGGWCCY 2 cut(s) 1440, 3147
PscI ACATGT 2 cut(s) 2075, 5309
PshAI GACNNNNGTC 1 cut(s) 6079
PshBI ATTAAT 1 cut(s) 1485
Psp5II RGGWCCY 2 cut(s) 1440, 3147
Psp6I CCWGG 5 cut(s) 475, 823, 1078, 2111, 4117
PspEI GGTNACC 1 cut(s) 5849
PspFI CCCAGC 1 cut(s) 3629
PspGI CCWGG 5 cut(s) 475, 823, 1078, 2111, 4117
PspN4I GGNNCC 5 cut(s) 657, 1221, 1441, 3149, 5566
PspPI GGNCC 4 cut(s) 696, 1440, 3147, 4115
PspPPI RGGWCCY 2 cut(s) 1440, 3147
PstI CTGCAG 9 cut(s) 999, 1228, 1640, 1918, 3269, 3338, 3946, 3985, 6720
PstNI CAGNNNCTG 5 cut(s) 455, 1316, 4574, 4745, 4916
PsuI RGATCY 9 cut(s) 983, 1121, 1936, 3316, 3385, 4306, 5362, 6483, 6721
PsyI GACNNNGTC 2 cut(s) 3206, 3449
RseI CAYNNNNRTG 6 cut(s) 83, 2805, 3747, 3965, 4000, 4092
SapI GCTCTTC 1 cut(s) 5997
Sau96I GGNCC 4 cut(s) 696, 1440, 3147, 4115
SbfI CCTGCAGG 1 cut(s) 1228
ScaI AGTACT 1 cut(s) 5764
ScrFI CCNGG 5 cut(s) 477, 825, 1080, 2113, 4119
SdaI CCTGCAGG 1 cut(s) 1228
SduI GDGCHC 5 cut(s) 576, 2200, 2518, 4214, 6715
SexAI ACCWGGT 1 cut(s) 475
Sfr274I CTCGAG 1 cut(s) 5036
SfuI TTCGAA 3 cut(s) 809, 3864, 6135
SinI GGWCC 4 cut(s) 696, 1440, 3147, 4115
SlaI CTCGAG 1 cut(s) 5036
SmiMI CAYNNNNRTG 6 cut(s) 83, 2805, 3747, 3965, 4000, 4092
SmlI CTYRAG 5 cut(s) 110, 2790, 4256, 4430, 5036
SmoI CTYRAG 5 cut(s) 110, 2790, 4256, 4430, 5036
SpeI ACTAGT 2 cut(s) 4973, 6326
Sse8387I CCTGCAGG 1 cut(s) 1228
SseBI AGGCCT 1 cut(s) 6215
SsiI CCGC 8 cut(s) 301, 306, 509, 2891, 5834, 6057, 6460, 6709
SspI AATATT 3 cut(s) 3232, 3773, 4492
StuI AGGCCT 1 cut(s) 6215
StyD4I CCNGG 5 cut(s) 475, 823, 1078, 2111, 4117
TaiI ACGT 3 cut(s) 3670, 4217, 5508
TatI WGTACW 6 cut(s) 285, 1093, 2144, 2684, 5713, 5762
TauI GCSGC 2 cut(s) 2894, 6462
TseFI GTSAC 7 cut(s) 936, 3208, 3275, 3344, 3953, 4340, 5849
Tsp45I GTSAC 7 cut(s) 936, 3208, 3275, 3344, 3953, 4340, 5849
TspGWI ACGGA 5 cut(s) 712, 1397, 1419, 2408, 6589
Tth111I GACNNNGTC 2 cut(s) 3206, 3449
Van91I CCANNNNNTGG 1 cut(s) 6374
Vha464I CTTAAG 1 cut(s) 110
VpaK11BI GGWCC 4 cut(s) 696, 1440, 3147, 4115
VspI ATTAAT 1 cut(s) 1485
XbaI TCTAGA 1 cut(s) 3388
XceI RCATGY 4 cut(s) 1337, 2079, 3746, 5313
XcmI CCANNNNNNNNNTGG 3 cut(s) 1387, 5204, 6442
XhoI CTCGAG 1 cut(s) 5036
XmnI GAANNNNTTC 4 cut(s) 805, 2226, 2271, 3082
ZrmI AGTACT 1 cut(s) 5764
Zsp2I ATGCAT 2 cut(s) 4003, 4329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.