Rh6AG200800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
36078614 .. 36089097
10484 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG200800.1

Sequence Viewer

Length: 6363 bp
ATGGATTTCTACGCGATGAAGAGGAAGGAGCTGCAAGCGCTGTGCAAGAAGCATGGAATTCGGGCCAATATGAAGAACGCAGAAATGGCCGAACGGCTTACCTTGCTTCTTAAGGAAGATGAAAATTCGATGACAGAAGCTAAGCCGGTGGAGAAACAGTTGGAAGCAACTGAAATGGTGATTGATTCGGTTGAAAGTCAGAAAGTTAAGAAAGTGAAGTTCAGTCCTGACAATGAAACCTTTTACTTTGTGGCTACTGACAAAGACTCGGACTCGGATTGTGAGTACAAACCAAAGAAGTGGGGCGGAAGAAGGAAGTCTATGGGGAAGAAGGTTTTGGAGAAGAAGGAAGTTTTGGATGTGGTTGAAAATGCAAGAGAAGTTGAAGTAGTGGAAATTAAGGACACCCCTGTTAGTGTTACGAGCTCTCAAAAGCAAAAGATGGTTGCAGGAGCTGTGGAGTCGGTTTTTTCACCTGGTCATGGGCAAAAGAAAGTGATAATTGGTGAGGAAAATGTTGATGGGAAAGGTATTAAACCTGTAAGAGTCCAGAAGGAATGTAAAGCAGTTGTGCTCCACAAGGGAAAGGAGGTTGCAAGAGATGATGCTAGAAAAAGAACAAGGAACGAAAATACAGAAGGCGCTTCCCAAGTGGTGCCAAGTGAAGTTCTCTTACCTAAACCTCCTTTAAGGAGGTCCAGACGAAAAACCACATTGTTTTCTTCTGTGGCTGGTGCTGAGAAGGAGTTGGGAATTTGCGAAGCCGTTGAAACAGTGAAACTACCAAGAGAGCCGGTTACTAGAAAGAGTTCTAATGCTGCTAAATCTGGCAGGAAGTCTAGTAGGAATGCATGTAAAAAGGTACCAGCGGAAACCTGTGATGACAGAATTGCAACTGCTGTGGAAATGGATAGGCTTGTGCAGGAATTCCAAGAGCCGTCACTGTTAGAGGAGAGTTCAGTAGTTGTGTACGAGTCATTAGATAGATCTCCTGTGCTGCAGATGGGCAAGGAACTGGAAAGAGATGTTACTAAAAAACGACCAAGGAATAAAGACTTTGGAGGGAATCCTGAAGTTGAGCCAGGTTTGGAAAATGTACTTCCACCCAAGGCTCGTTCAAGGAGATCTAATAGCAAGACTGCATTATTGACAGAAAGTATGCCTGCTGAAAATAATTCACCACTTGAAGAACCAAAGATAGATGTTGGATTGGAAATACAGGAACCTGCAGGAAATGAAAATGAAACTGATTCTTGTTTCAACAAAGCTGTAGAAAAGTCAAGAAAGAAGAGGAAGGGATCAAGCAAGAAGACAGAATCTGCCACAAAGGATCAGCCAGTTAGTTTGGCAGCATCTACTGTATATTCGGACATTGAGAAAGCCACTGATATTTTGGCTCATCTGAACGGAAATCGGGTTGTGGAATCTGTGAACTTTCAAGGGACCTCTATGTTACATAAGGACCAGAATGATGAACAACCCATCATTAATCATATCGAAAGTGTTGCAGTAGAAGATGCCATCTTCAGTAACTCTACTGTGGGTGTTATGGATGATCCTTGTTTGTCTTTTAACAGAAAGGATACTGATCAAGAAAACACAGTTGAACAAAACCCAGTAGCATCTCCGGGTAATCTCTGCAGTGTGGTGGTTTCTCCAAATGCCTGTGTACGTGATGTTCATTCATTCACCTATCGATCAGAATGTGAAGGTCAAACTTCCAACTTATTGGACTTGAATGAAGGATCAGAATCAGAAGAGTCATTGATTGTTAAATCCATTAGTCGAAGAGGTGGTGTGCTGGATGATCAATTGGCAAACGGGGTCATAGCTAGTGTTTCCGAGGATCAGAAATCAATTGACAAAATAGTGATGGTTCAAGTTGATATGGATTCTAAAAAACCTGCTGAAGCTGCTGCAGAGAAGGTTGGAGAAATGCATCTGGGTAGTACCGTTCCCAGTGATACAACTCCAATAGATTCTTCACTGGTAAAGCAAGTTGGGAATGAGTTTCAACCTCAATGCGTTGGAGGAATAAATATAAATCATATTGGAACAAATTTCTCTTCTACATGTGTCTCTGAAGTCCCTGATGAAACAACATCTTCCTGGAATGAAGAGATACTATGTAATCATGATAGTACAAAAGAAGTTATGCCAGCAGATAATGAATCCGCTAAGGCATTAGATAGTGCCCAAATGATACCAATTGTTACTGAAGAGATTCTTCACCAGGCTATTGAAAGGAACTCAAATTTTGATGAAAGTGTTCTTCTGGATTCACATAACACAGATGGTCAGGTTGCTGAAGTTAAATTTCCTGAAATCTCAGATGTTACTGAAGACATTGAAGAGAAATATGAGAATGAATCCTCTTATGGTGAGAGGACGGAAGAAGTTGTGCCAGCCGATAATGAATCTGTTGAGGAATTAGATATTGCTCAAACTTTACCAAATGGTATTCACGAGGTAAATGGGGGTACTGAAAAAAGCTCAAACTTGGATGAGAGTGCCCATCCTGATTCAAACAACACAGATGGTCAGGTTGCTGAGGATAAATTCTCGAATGAAAGCATTGTCAATGCCAGTGAAGAAATTAAAGACAAATGTGAGCATGAATCCTCAGTTGGTGATAGAAGTCCAATCACCCTAGCAGAAAGGATAATGGATACAGTTGAAAGTGGGACAATCCCTGTAGTTTTAAAATCTGATGGTGATGCCCAAAACTCATCTTCCTGTGGGGTCTCTTGTAGCAATGATGAATATGAACAAGGGAACAAACTTAAAGCTCAAGGCATACATCTCTGTGAAGAAGTTGAGGGTTTGTTGCATGGAAGCAAGTACCAGAATTTATCTTTTGATGGGAAAATAGTTGTGAATGATCACATAGTGGCACCCACTATGAATTCAAATCTTGAATGTGCGATGGATGCTGTGGAGGTTGAAAATGAGAGAAAATCTTTGAAAGGTCTGGATATAGTGGTGTCTGTAGAGAGTGAAGGTGTAGTGAGAACATCACAATCTGCTCTCCCACTGGATTGCATGAACACTGGTGATTCTGACTTGCATAGGGAAGGAAAGGCTTCATTTGCTACAGATGAATGGACATACAAGGATGAAAATGCTAGTATTAGTGATAATATCAGGACTCTAGGTGGAGGTATTGAGAACAGAATGGTGGGGAGCAAAGCTGATATGGAGGACTGTGTCACTTACAGAGAAAATAATAATATTGGCAACTGCTTGACTGAAGGAGATCGATACTGCAGCAAGGGCGACAAAAACAATCAGAAAGAAAAGGAGAATGTTGATGAGGATCTAGCTTTTCAAGAAGATGAGGAAAATAAAGAAGGGGCCTGTAAAGTTGAAGAAATGTTGGATGCTATGCCTGATTTGAGTATGGATAAAAATGCAACTTCCAAGGAACATAGTCAAGAACTACTTGATATCCAGAAAGGGGTTGCTGAACAAGATGTAGGTGAAAATTCTGATGGGCAAGTGGAGGTTAAGCACAGTGAGAATGCAATAGATGCTGGGGACGGCAAAGACATACTTGAAAAATGTGATCAACATGCCGAAGAGTCTATTTTGGAAGATAATGAAAGATTACAAGAGCAAGACATTGTATCTGTTATGTTACAAGAGTATGTAGATGGCGAGAAAGAAAGGAATGAATATTTAGAGGTCAAGAATCCTAATGTATCCATCCACGAAGAAAGCTTTTCTGAAATTGTTACAGATCAGATGGCAAATGAAGTTATAGAATTCGAATCACAAGATAAAGTGAACTTTGGAAGTCCTGACAACTGCAACCAAATATCCTCAGAGGTGGAAAAATGTGGTTCTGCAGCTTCAAGTGACTCTATATCTAGGGATGACAAAACTGCAGAAGGGATAGCATATGCATGGAAGATGGGTGAAGATTCAAGTTCTAAGGATATCCGAGGAGGAGAAAGCCTTTCCTTTTCCATCAGCTCTGATGGCCATAGACACAATAATGATGCAGCAGACATAACTGGTCCTGGAGGCATGGAAGTTAGTAAGGAGAATAATGTGGATGAAACTAAGATGGTTGAGCAAAAACTGATTGGTGGCAGTCTACTGGAAGCAAGGAGCATGTCAGATGTGAAATCATTTTCTGATGTCTCTCGGAACAGACTTCAGTGCGACCTTGGTTATTCTTTGCACGATGCTGTAGTCTCATGCAAGGATCCTGAAAGGAAGAATATGCATATGCTAGTTGGTGACAATGCTAGAACAGATGGATTCGGAATGCTAGAAAGTGTCTCAGGTGAGAAGGTTGATGAAGGTTTAGATACTGGCATATATGGTTCTAAGGACACACTAAATTCCAAAGAGACTGAGGAAATACTTGATCTCCATAATATTGGTACTGTGGCCACCTGTTCTGCTGATTCCACCGAACCCTCAATGCTGAAACCTGAAATGGGTGTTGATTCTCCAGTTTCTGCTTCTAATTATGAAAACAAAGCCTTGGAATTAGAGGCTGCCTCACCCATATTGAATGGTTTTGGGATGAAAGGACTTTTCAAAGATGACCAAACTTCTGGACTCAAAAAAGCTGATTCCACCGAACCCTCTATGCTAAAATCTGAAATGGGTGTTGATTCTCCAGTTTCTGCTTCTAATTATGAAAACAAAGCCTTGGAATTAGAGGCTGCCTCACCCATATTGACTGGTTTTGGGATGAAACGACTTTCCACAGATGACCAAACTGCTGGACTCGAAAAATCAGGTCTCGTGATGTCAAAAGGCAATTCAAAGAGTGAACATATTGAGGATGTGAATAATTTAAAAGAAAGTATTGATAATTCACAAGTTGTAGAGGAACTTCATCATCAGGAGAATAAAGTGATCAGGGAAGTGGTGGAGTCGAAATCCACTCAGGAAATGTATAACTATTGCCTTACTGGTTCTGCTATTATGGATACTAATGTGCACATTCCAAGTTTTTGGGATGAGTCAACAGAAGTAGAACCATGCCTTGATAATGCTTGTGCCAAACCTCAAAAGTGTAATGCTGCTGCCATTGCCTCAGAGTTTAATGTTTCTTCATCTTTTGGAGATCTATGTGACTTAAAAGAGTTCAGTAAGGCTGACAGTGAAAGTGCAAAAGAAAAGGTGGCGACTGATGATTGTATGGGAGATCAACCATCAGAAAATTTGAGAGTTTCGGAAGACCTAGAAGCTCATACAATGATTGGTAACGTAATGGTGATAAACCAGGAAGAAGATGCAAATTCTTTGCTATCATTTGGTTATGTAGGTGCCAATACAGTGTCTCCAGAAAAAGTGGTTGGGTGTTTGGAAAATATGGCTGCTGGTATTGAGGTTTCAAATCTGGGATTAAATGAAGCACCAAGTTCCAAAGATTCTACTTTTGATGAACAGAGTAAATGCAATCTTTGTGATGATGTACTGGTCGATGGCAATAGAGACAATAATGCTGTTGCAGACAAAGTTAGTACTGGAAGTACGGAAGCAATAATTGGTATTAAGAATGTTGGTGATGGAATTAAGTCGGTAGAAAAAACCCCGCAACCATTGGAAGGTGACCATCTTTTGGAAGAAAGAGACTCTTCATATGGAAAATCATTTTCTGATATTTCTCATAGCAGGAATGAAGGTGATTCTACTTTCTCCTTGCACAATGTTCCATTCTGTTGCGGTGTTTTCAAAAAGAGACATCTGTCTGTGCAAGAAGGTAGAGGCTTGAAGGCAGTAAGAGTCACAGGCTTGAAGTTTGAAGGTGTAAATGCTGGCATAGATGGTTTTGCTGATACTCCTGCTACTGCTTCAAGGCATGAAATTAAGGCCTTGGAGAATGTAGCCTCGCCTGTAGCCAACAGTCTTGGGATGGATTGGCTTTTTGGAGACAATGATGAAGTTAAGAAATCAGATGCAGAGATGTCAAACACCAATTCAACTAGTGAAGATGTTAAGAATGGGAATGGAGGTGTAGCTATTCCACAAGTTGGTGCCGGGGAACTTGGAGAGCATAAGCATCAACCAATAGAAGTTGGGAAGCTGAAATCCACTCAGGAATTGGGTATTCATTGCCGCCCATGTTCTCCTGTTACAGAGATCTCTAGTCATGCAAAACTGGATTCATCCAGAGAGAAAGCTCTGGAGGCAAATTTGGAGAGAAGTATTAGTGTTTCTACTGCACCTAGACGGAAGAAGAACAGAGATATTTTTATTCCTAGAACTCCAAAGAATCTGATCAATGAGTCTGATATGAAGGAAAACTTCAATGCCAGAAAGAGTGAACCAGTAACAAACATCAGTTCAGTAAAACCTCTGCATGGCAGGCGAGCACTGGAGGATCTGCAAAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2120

Amino Acids

231.47

Weight (kDa)

4.7

Isoelectric Point (pI)

47.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1234, 1912
Acc65I GGTACC 1 cut(s) 862
AccB1I GGYRCC 5 cut(s) 655, 862, 2893, 5288, 5999
AccB7I CCANNNNNTGG 2 cut(s) 5584, 5996
AccI GTMKAC 1 cut(s) 4099
AccII CGCG 1 cut(s) 14
AciI CCGC 6 cut(s) 306, 869, 2175, 5558, 5688, 6082
AclWI GGATC 9 cut(s) 1306, 1338, 1550, 1753, 1854, 3324, 4205, 4218, 6354
AcoI YGGCCR 3 cut(s) 87, 3982, 4398
AcuI CTGAAG 9 cut(s) 1092, 1510, 1929, 2103, 2238, 2328, 2361, 3270, 4145
AdeI CACNNNGTG 1 cut(s) 2890
AfeI AGCGCT 1 cut(s) 39
AfiI CCNNNNNNNGG 7 cut(s) 482, 3457, 4448, 5570, 5584, 5996, 6326
AflII CTTAAG 1 cut(s) 110
AflIII ACRYGT 1 cut(s) 2072
AhlI ACTAGT 1 cut(s) 5948
AjnI CCWGG 6 cut(s) 475, 1081, 2108, 2232, 4021, 5244
Alw21I GWGCWC 4 cut(s) 428, 576, 4962, 6340
Alw44I GTGCAC 1 cut(s) 4958
AlwI GGATC 9 cut(s) 1306, 1338, 1550, 1753, 1854, 3324, 4205, 4218, 6354
AlwNI CAGNNNCTG 4 cut(s) 455, 1319, 4469, 4640
Aor51HI AGCGCT 1 cut(s) 39
AoxI GGCC 6 cut(s) 63, 87, 3354, 3982, 4398, 5835
ApaLI GTGCAC 1 cut(s) 4958
AseI ATTAAT 1 cut(s) 1488
Asp700I GAANNNNTTC 4 cut(s) 808, 2223, 2268, 3082
Asp718I GGTACC 1 cut(s) 862
AspLEI GCGC 2 cut(s) 40, 644
AspS9I GGNCC 6 cut(s) 63, 696, 1443, 1462, 3354, 4019
AsuC2I CCSGG 2 cut(s) 1629, 6004
AsuII TTCGAA 1 cut(s) 3768
AvaII GGWCC 4 cut(s) 696, 1443, 1462, 4019
BaeGI GKGCMC 3 cut(s) 2197, 2515, 4962
BaeI ACNNNNGTAYC 2 cut(s) 4941, 4974
BalI TGGCCA 2 cut(s) 3984, 4400
BamHI GGATCC 1 cut(s) 4210
BanI GGYRCC 5 cut(s) 655, 862, 2893, 5288, 5999
BanII GRGCYC 1 cut(s) 428
BarI GAAGNNNNNNTAC 4 cut(s) 657, 689, 4836, 4868
BauI CACGAG 2 cut(s) 2465, 4760
BbsI GAAGAC 3 cut(s) 1316, 2349, 5205
Bbv12I GWGCWC 4 cut(s) 428, 576, 4962, 6340
BbvCI CCTCAGC 1 cut(s) 2550
BceAI ACGGC 4 cut(s) 110, 749, 922, 3556
BcgI CGANNNNNNTGC 4 cut(s) 41, 75, 1487, 1521
BciT130I CCWGG 6 cut(s) 477, 1083, 2110, 2234, 4023, 5246
BciVI GTATCC 4 cut(s) 1576, 2662, 3712, 4942
BclI TGATCA 6 cut(s) 1588, 1807, 2881, 3565, 4875, 6243
BcnI CCSGG 2 cut(s) 1629, 6004
BcuI ACTAGT 1 cut(s) 5948
BfoI RGCGCY 2 cut(s) 41, 645
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 2 cut(s) 1234, 1912
BfuI GTATCC 4 cut(s) 1576, 2662, 3712, 4942
BglII AGATCT 4 cut(s) 986, 1124, 5086, 6105
BlpI GCTNAGC 1 cut(s) 141
BmcAI AGTACT 1 cut(s) 5488
Bme1390I CCNGG 8 cut(s) 477, 1083, 1629, 2110, 2234, 4023, 5246, 6004
Bme18I GGWCC 4 cut(s) 696, 1443, 1462, 4019
BmgT120I GGNCC 6 cut(s) 63, 696, 1443, 1462, 3354, 4019
BmiI GGNNCC 9 cut(s) 657, 864, 1224, 1444, 2895, 3355, 4212, 5290, 6001
BmrFI CCNGG 8 cut(s) 477, 1083, 1629, 2110, 2234, 4023, 5246, 6004
BmrI ACTGGG 2 cut(s) 1610, 1953
BmuI ACTGGG 2 cut(s) 1610, 1953
BoxI GACNNNNGTC 1 cut(s) 5710
BpiI GAAGAC 3 cut(s) 1316, 2349, 5205
BplI GAGNNNNNCTC 4 cut(s) 4496, 4528, 4667, 4699
BpmI CTGGAG 6 cut(s) 4044, 4446, 4617, 5289, 6170, 6362
Bpu10I CCTNAGC 2 cut(s) 2178, 2550
Bpu1102I GCTNAGC 1 cut(s) 141
Bpu14I TTCGAA 1 cut(s) 3768
BpuEI CTTGAG 1 cut(s) 2775
BpuMI CCSGG 2 cut(s) 1629, 6004
Bsa29I ATCGAT 2 cut(s) 1696, 3259
BsaAI YACGTR 1 cut(s) 1673
BsaBI GATNNNNATC 3 cut(s) 1587, 1750, 3315
BsaI GGTCTC 2 cut(s) 2749, 4763
BsaXI ACNNNNNCTCC 6 cut(s) 143, 173, 4362, 4392, 5287, 5317
Bsc4I CCNNNNNNNGG 7 cut(s) 482, 3457, 4448, 5570, 5584, 5996, 6326
Bse118I RCCGGY 2 cut(s) 145, 793
Bse3DI GCAATG 3 cut(s) 2761, 5049, 6076
Bse8I GATNNNNATC 3 cut(s) 1587, 1750, 3315
BseBI CCWGG 6 cut(s) 477, 1083, 2110, 2234, 4023, 5246
BseCI ATCGAT 2 cut(s) 1696, 3259
BseJI GATNNNNATC 3 cut(s) 1587, 1750, 3315
BseLI CCNNNNNNNGG 7 cut(s) 482, 3457, 4448, 5570, 5584, 5996, 6326
BseMI GCAATG 3 cut(s) 2761, 5049, 6076
BseRI GAGGAG 3 cut(s) 965, 3960, 3963
BseSI GKGCMC 3 cut(s) 2197, 2515, 4962
BseYI CCCAGC 1 cut(s) 3533
BsgI GTGCAG 2 cut(s) 941, 6171
Bsh1236I CGCG 1 cut(s) 14
BshFI GGCC 6 cut(s) 65, 89, 3356, 3984, 4400, 5837
BshNI GGYRCC 5 cut(s) 655, 862, 2893, 5288, 5999
BshVI ATCGAT 2 cut(s) 1696, 3259
BsiHKAI GWGCWC 4 cut(s) 428, 576, 4962, 6340
BsiSI CCGG 4 cut(s) 146, 794, 1628, 6003
BslFI GGGAC 4 cut(s) 1456, 2072, 2698, 3551
BslI CCNNNNNNNGG 7 cut(s) 482, 3457, 4448, 5570, 5584, 5996, 6326
BsmFI GGGAC 4 cut(s) 1456, 2072, 2698, 3551
BsmI GAATGC 3 cut(s) 853, 3526, 4278
BsnI GGCC 6 cut(s) 65, 89, 3356, 3984, 4400, 5837
Bso31I GGTCTC 2 cut(s) 2749, 4763
Bsp119I TTCGAA 1 cut(s) 3768
Bsp1286I GDGCHC 6 cut(s) 428, 576, 2197, 2515, 4962, 6340
Bsp1720I GCTNAGC 1 cut(s) 141
BspACI CCGC 6 cut(s) 306, 869, 2175, 5558, 5688, 6082
BspANI GGCC 6 cut(s) 65, 89, 3356, 3984, 4400, 5837
BspDI ATCGAT 2 cut(s) 1696, 3259
BspFNI CGCG 1 cut(s) 14
BspHI TCATGA 1 cut(s) 2134
BspLI GGNNCC 9 cut(s) 657, 864, 1224, 1444, 2895, 3355, 4212, 5290, 6001
BspMAI CTGCAG 7 cut(s) 1002, 1231, 1643, 1921, 3269, 3850, 3889
BspMI ACCTGC 2 cut(s) 1234, 1912
BspPI GGATC 9 cut(s) 1306, 1338, 1550, 1753, 1854, 3324, 4205, 4218, 6354
BspT104I TTCGAA 1 cut(s) 3768
BspT107I GGYRCC 5 cut(s) 655, 862, 2893, 5288, 5999
BspTI CTTAAG 1 cut(s) 110
BspTNI GGTCTC 2 cut(s) 2749, 4763
BsrDI GCAATG 3 cut(s) 2761, 5049, 6076
BsrFI RCCGGY 2 cut(s) 145, 793
BssAI RCCGGY 2 cut(s) 145, 793
BssSI CACGAG 2 cut(s) 2465, 4760
BssT1I CCWWGG 7 cut(s) 1043, 1107, 3420, 4171, 4494, 4665, 5838
Bst2BI CACGAG 2 cut(s) 2465, 4760
Bst2UI CCWGG 6 cut(s) 477, 1083, 2110, 2234, 4023, 5246
BstAFI CTTAAG 1 cut(s) 110
BstAPI GCANNNNNTGC 1 cut(s) 3530
BstBAI YACGTR 1 cut(s) 1673
BstBI TTCGAA 1 cut(s) 3768
BstC8I GCNNGC 7 cut(s) 36, 1164, 2160, 2406, 5782, 6332, 6336
BstEII GGTNACC 1 cut(s) 5573
BstFNI CGCG 1 cut(s) 14
BstH2I RGCGCY 2 cut(s) 41, 645
BstHHI GCGC 2 cut(s) 40, 644
BstNI CCWGG 6 cut(s) 477, 1083, 2110, 2234, 4023, 5246
BstNSI RCATGY 4 cut(s) 855, 2076, 3575, 4120
BstPAI GACNNNNGTC 1 cut(s) 5710
BstPI GGTNACC 1 cut(s) 5573
BstSCI CCNGG 8 cut(s) 475, 1081, 1627, 2108, 2232, 4021, 5244, 6002
BstSLI GKGCMC 3 cut(s) 2197, 2515, 4962
BstUI CGCG 1 cut(s) 14
BstV2I GAAGAC 3 cut(s) 1316, 2349, 5205
BstX2I RGATCY 7 cut(s) 986, 1124, 3316, 4210, 5086, 6105, 6346
BstXI CCANNNNNNTGG 6 cut(s) 300, 1729, 4388, 4568, 4739, 4974
BstYI RGATCY 7 cut(s) 986, 1124, 3316, 4210, 5086, 6105, 6346
Bsu15I ATCGAT 2 cut(s) 1696, 3259
BsuI GTATCC 4 cut(s) 1576, 2662, 3712, 4942
BsuRI GGCC 6 cut(s) 65, 89, 3356, 3984, 4400, 5837
BsuTUI ATCGAT 2 cut(s) 1696, 3259
BtgZI GCGATG 2 cut(s) 29, 2939
BtsI GCAGTG 1 cut(s) 1648
BveI ACCTGC 2 cut(s) 1234, 1912
Cac8I GCNNGC 7 cut(s) 36, 1164, 2160, 2406, 5782, 6332, 6336
CaiI CAGNNNCTG 4 cut(s) 455, 1319, 4469, 4640
CciI TCATGA 1 cut(s) 2134
CfoI GCGC 2 cut(s) 40, 644
Cfr10I RCCGGY 2 cut(s) 145, 793
Cfr13I GGNCC 6 cut(s) 63, 696, 1443, 1462, 3354, 4019
ClaI ATCGAT 2 cut(s) 1696, 3259
CsiI ACCWGGT 1 cut(s) 475
CspCI CAANNNNNGTGG 2 cut(s) 882, 917
DraI TTTAAA 2 cut(s) 2703, 4815
DraIII CACNNNGTG 1 cut(s) 2890
EaeI YGGCCR 3 cut(s) 87, 3982, 4398
EciI GGCGGA 1 cut(s) 321
Ecl136II GAGCTC 1 cut(s) 426
Eco130I CCWWGG 7 cut(s) 1043, 1107, 3420, 4171, 4494, 4665, 5838
Eco147I AGGCCT 1 cut(s) 5837
Eco24I GRGCYC 1 cut(s) 428
Eco31I GGTCTC 2 cut(s) 2749, 4763
Eco32I GATATC 2 cut(s) 3448, 3940
Eco47I GGWCC 4 cut(s) 696, 1443, 1462, 4019
Eco47III AGCGCT 1 cut(s) 39
Eco53kI GAGCTC 1 cut(s) 426
Eco57I CTGAAG 9 cut(s) 1092, 1510, 1929, 2103, 2238, 2328, 2361, 3270, 4145
Eco91I GGTNACC 1 cut(s) 5573
EcoICRI GAGCTC 1 cut(s) 426
EcoO109I RGGNCCY 2 cut(s) 1443, 3354
EcoO65I GGTNACC 1 cut(s) 5573
EcoRI GAATTC 4 cut(s) 57, 926, 2905, 3764
EcoRII CCWGG 6 cut(s) 475, 1081, 2108, 2232, 4021, 5244
EcoRV GATATC 2 cut(s) 3448, 3940
EcoT14I CCWWGG 7 cut(s) 1043, 1107, 3420, 4171, 4494, 4665, 5838
EcoT22I ATGCAT 4 cut(s) 853, 1941, 3907, 4233
EcoT38I GRGCYC 1 cut(s) 428
ErhI CCWWGG 7 cut(s) 1043, 1107, 3420, 4171, 4494, 4665, 5838
FaqI GGGAC 4 cut(s) 1456, 2072, 2698, 3551
FauI CCCGC 1 cut(s) 5565
FauNDI CATATG 3 cut(s) 3901, 4233, 5605
FbaI TGATCA 6 cut(s) 1588, 1807, 2881, 3565, 4875, 6243
FblI GTMKAC 1 cut(s) 4099
FriOI GRGCYC 1 cut(s) 428
GlaI GCGC 2 cut(s) 39, 643
GsaI CCCAGC 1 cut(s) 3537
GsuI CTGGAG 6 cut(s) 4044, 4446, 4617, 5289, 6170, 6362
HaeII RGCGCY 2 cut(s) 41, 645
HaeIII GGCC 6 cut(s) 65, 89, 3356, 3984, 4400, 5837
HapII CCGG 4 cut(s) 146, 794, 1628, 6003
HhaI GCGC 2 cut(s) 40, 644
Hin6I GCGC 2 cut(s) 38, 642
HinP1I GCGC 2 cut(s) 38, 642
HincII GTYRAC 1 cut(s) 4986
HindII GTYRAC 1 cut(s) 4986
HindIII AAGCTT 1 cut(s) 3718
HpaII CCGG 4 cut(s) 146, 794, 1628, 6003
Hpy166II GTNNAC 9 cut(s) 970, 1432, 1670, 3787, 4100, 4790, 4960, 4986, 6290
Hpy8I GTNNAC 9 cut(s) 970, 1432, 1670, 3787, 4100, 4790, 4960, 4986, 6290
HpyCH4IV ACGT 2 cut(s) 1672, 5229
HpySE526I ACGT 2 cut(s) 1672, 5229
HspAI GCGC 2 cut(s) 38, 642
KpnI GGTACC 1 cut(s) 866
Ksp22I TGATCA 6 cut(s) 1588, 1807, 2881, 3565, 4875, 6243
LmnI GCTCC 5 cut(s) 28, 452, 579, 3183, 4113
MabI ACCWGGT 1 cut(s) 475
MaeII ACGT 2 cut(s) 1672, 5229
MfeI CAATTG 3 cut(s) 1811, 1857, 2208
MflI RGATCY 7 cut(s) 986, 1124, 3316, 4210, 5086, 6105, 6346
MhlI GDGCHC 6 cut(s) 428, 576, 2197, 2515, 4962, 6340
MlsI TGGCCA 2 cut(s) 3984, 4400
MluNI TGGCCA 2 cut(s) 3984, 4400
MmeI TCCRAC 6 cut(s) 141, 1186, 1746, 1909, 2008, 3357
Mox20I TGGCCA 2 cut(s) 3984, 4400
Mph1103I ATGCAT 4 cut(s) 853, 1941, 3907, 4233
MroXI GAANNNNTTC 4 cut(s) 808, 2223, 2268, 3082
MscI TGGCCA 2 cut(s) 3984, 4400
MslI CAYNNNNRTG 3 cut(s) 2805, 3904, 3996
Msp20I TGGCCA 2 cut(s) 3984, 4400
MspA1I CMGCKG 1 cut(s) 869
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 4 cut(s) 146, 794, 1628, 6003
MspR9I CCNGG 8 cut(s) 477, 1083, 1629, 2110, 2234, 4023, 5246, 6004
MunI CAATTG 3 cut(s) 1811, 1857, 2208
Mva1269I GAATGC 3 cut(s) 853, 3526, 4278
MvaI CCWGG 6 cut(s) 477, 1083, 2110, 2234, 4023, 5246
MvnI CGCG 1 cut(s) 14
NciI CCSGG 2 cut(s) 1629, 6004
NdeI CATATG 3 cut(s) 3901, 4233, 5605
NlaIV GGNNCC 9 cut(s) 657, 864, 1224, 1444, 2895, 3355, 4212, 5290, 6001
NmuCI GTSAC 7 cut(s) 939, 3208, 3857, 4244, 5093, 5573, 5749
NsiI ATGCAT 4 cut(s) 853, 1941, 3907, 4233
NspI RCATGY 4 cut(s) 855, 2076, 3575, 4120
NspV TTCGAA 1 cut(s) 3768
PagI TCATGA 1 cut(s) 2134
PceI AGGCCT 1 cut(s) 5837
PciI ACATGT 1 cut(s) 2072
PctI GAATGC 3 cut(s) 853, 3526, 4278
PdmI GAANNNNTTC 4 cut(s) 808, 2223, 2268, 3082
PflFI GACNNNGTC 1 cut(s) 3206
PflMI CCANNNNNTGG 2 cut(s) 5584, 5996
PfoI TCCNGGA 2 cut(s) 2108, 4021
Ppu21I YACGTR 1 cut(s) 1673
PpuMI RGGWCCY 1 cut(s) 1443
PscI ACATGT 1 cut(s) 2072
PshAI GACNNNNGTC 1 cut(s) 5710
PshBI ATTAAT 1 cut(s) 1488
Psp124BI GAGCTC 1 cut(s) 428
Psp5II RGGWCCY 1 cut(s) 1443
Psp6I CCWGG 6 cut(s) 475, 1081, 2108, 2232, 4021, 5244
PspEI GGTNACC 1 cut(s) 5573
PspFI CCCAGC 1 cut(s) 3533
PspGI CCWGG 6 cut(s) 475, 1081, 2108, 2232, 4021, 5244
PspN4I GGNNCC 9 cut(s) 657, 864, 1224, 1444, 2895, 3355, 4212, 5290, 6001
PspPI GGNCC 6 cut(s) 63, 696, 1443, 1462, 3354, 4019
PspPPI RGGWCCY 1 cut(s) 1443
PsrI GAACNNNNNNTAC 2 cut(s) 1662, 1694
PstI CTGCAG 7 cut(s) 1002, 1231, 1643, 1921, 3269, 3850, 3889
PstNI CAGNNNCTG 4 cut(s) 455, 1319, 4469, 4640
PsuI RGATCY 7 cut(s) 986, 1124, 3316, 4210, 5086, 6105, 6346
PsyI GACNNNGTC 1 cut(s) 3206
RseI CAYNNNNRTG 3 cut(s) 2805, 3904, 3996
SacI GAGCTC 1 cut(s) 428
Sau96I GGNCC 6 cut(s) 63, 696, 1443, 1462, 3354, 4019
SbfI CCTGCAGG 1 cut(s) 1231
ScaI AGTACT 1 cut(s) 5488
ScrFI CCNGG 8 cut(s) 477, 1083, 1629, 2110, 2234, 4023, 5246, 6004
SdaI CCTGCAGG 1 cut(s) 1231
SduI GDGCHC 6 cut(s) 428, 576, 2197, 2515, 4962, 6340
SexAI ACCWGGT 1 cut(s) 475
SfuI TTCGAA 1 cut(s) 3768
SinI GGWCC 4 cut(s) 696, 1443, 1462, 4019
SmiMI CAYNNNNRTG 3 cut(s) 2805, 3904, 3996
SmlI CTYRAG 2 cut(s) 110, 2790
SmoI CTYRAG 2 cut(s) 110, 2790
SpeI ACTAGT 1 cut(s) 5948
Sse8387I CCTGCAGG 1 cut(s) 1231
SseBI AGGCCT 1 cut(s) 5837
SsiI CCGC 6 cut(s) 306, 869, 2175, 5558, 5688, 6082
SspI AATATT 3 cut(s) 3232, 3677, 4387
SstI GAGCTC 1 cut(s) 428
StuI AGGCCT 1 cut(s) 5837
StyD4I CCNGG 8 cut(s) 475, 1081, 1627, 2108, 2232, 4021, 5244, 6002
StyI CCWWGG 7 cut(s) 1043, 1107, 3420, 4171, 4494, 4665, 5838
TaiI ACGT 2 cut(s) 1675, 5232
TatI WGTACW 5 cut(s) 285, 1096, 2141, 5437, 5486
TauI GCSGC 1 cut(s) 6084
TseFI GTSAC 7 cut(s) 939, 3208, 3857, 4244, 5093, 5573, 5749
Tsp45I GTSAC 7 cut(s) 939, 3208, 3857, 4244, 5093, 5573, 5749
TspGWI ACGGA 4 cut(s) 1422, 2405, 5513, 6211
Tth111I GACNNNGTC 1 cut(s) 3206
Van91I CCANNNNNTGG 2 cut(s) 5584, 5996
Vha464I CTTAAG 1 cut(s) 110
VneI GTGCAC 1 cut(s) 4958
VpaK11BI GGWCC 4 cut(s) 696, 1443, 1462, 4019
VspI ATTAAT 1 cut(s) 1488
XceI RCATGY 4 cut(s) 855, 2076, 3575, 4120
XcmI CCANNNNNNNNNTGG 2 cut(s) 1390, 6064
XmiI GTMKAC 1 cut(s) 4099
XmnI GAANNNNTTC 4 cut(s) 808, 2223, 2268, 3082
ZrmI AGTACT 1 cut(s) 5488
Zsp2I ATGCAT 4 cut(s) 853, 1941, 3907, 4233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.