Rh6AG201200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
36096910 .. 36097299
390 bp
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UTR
Exon/CDS
Intron
Rh6AG201200.1

Sequence Viewer

Length: 390 bp
ATGGTGATGAAGCAGGAAGAAGATGCAAATTCTTTGCTATCATTTGGTTATGTAAGTCCCAATACAGTGTCTTCAGAAAAAGTGGTTGGTTCGAAAAGTAATATCGCTGCTGGTATTGAGGTTTCAAATCTGAGATTAAATGAAGCATCAAGTTCCAAGGATTCTACTTCTGATGAACAGAGTAGATGCAATCTTTGTGATGTACTGGTTGATGGCAGTAGAGACAATAATATTGTTGCAGACAAAGTTAGTACTAGAAGTATGGAAGCAATAATTGGTATTAAGAATGCTGGTGATGGGGTTAAGTCGGTAGAAAAAAACGCCGCAAATATTGGATGCCGACAGTCTATTAGAAGAAAGAGACTCTTCATATGGCAAATCATTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

129

Amino Acids

14.01

Weight (kDa)

7.67

Isoelectric Point (pI)

59.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 324
AcsI RAATTY 1 cut(s) 28
AcuI CTGAAG 1 cut(s) 57
AfaI GTAC 2 cut(s) 204, 253
AgsI TTSAA 1 cut(s) 126
AjuI GAANNNNNNNTTGG 4 cut(s) 69, 101, 258, 290
Alw26I GTCTC 2 cut(s) 216, 355
ApeKI GCWGC 1 cut(s) 107
ApoI RAATTY 1 cut(s) 28
AsuHPI GGTGA 2 cut(s) 16, 305
AsuII TTCGAA 1 cut(s) 92
BbsI GAAGAC 1 cut(s) 63
BbvI GCAGC 1 cut(s) 94
BccI CCATC 2 cut(s) 206, 290
BcoDI GTCTC 2 cut(s) 216, 355
BfaI CTAG 1 cut(s) 255
BisI GCNGC 2 cut(s) 108, 324
BlsI GCNGC 2 cut(s) 109, 325
BmcAI AGTACT 1 cut(s) 253
BmsI GCATC 4 cut(s) 13, 155, 176, 326
BpiI GAAGAC 1 cut(s) 63
Bpu14I TTCGAA 1 cut(s) 92
BsaJI CCNNGG 1 cut(s) 156
Bse1I ACTGG 1 cut(s) 210
BseDI CCNNGG 1 cut(s) 156
BseGI GGATG 1 cut(s) 341
BseMII CTCAG 1 cut(s) 122
BseNI ACTGG 1 cut(s) 210
BseXI GCAGC 1 cut(s) 94
BslFI GGGAC 1 cut(s) 42
BsmAI GTCTC 2 cut(s) 216, 355
BsmFI GGGAC 1 cut(s) 42
BsmI GAATGC 1 cut(s) 292
Bsp119I TTCGAA 1 cut(s) 92
BspACI CCGC 1 cut(s) 324
BspCNI CTCAG 1 cut(s) 123
BspT104I TTCGAA 1 cut(s) 92
BsrI ACTGG 1 cut(s) 210
BssECI CCNNGG 1 cut(s) 156
BssT1I CCWWGG 1 cut(s) 156
Bst4CI ACNGT 2 cut(s) 67, 345
Bst6I CTCTTC 1 cut(s) 371
BstBI TTCGAA 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 131
BstF5I GGATG 1 cut(s) 341
BstMAI GTCTC 2 cut(s) 216, 355
BstV1I GCAGC 1 cut(s) 94
BstV2I GAAGAC 1 cut(s) 63
BtsCI GGATG 1 cut(s) 341
BtsIMutI CAGTG 1 cut(s) 72
Csp6I GTAC 2 cut(s) 203, 252
CviQI GTAC 2 cut(s) 203, 252
DdeI CTNAG 1 cut(s) 131
Eam1104I CTCTTC 1 cut(s) 371
EarI CTCTTC 1 cut(s) 371
Eco130I CCWWGG 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 57
EcoT14I CCWWGG 1 cut(s) 156
ErhI CCWWGG 1 cut(s) 156
FaiI YATR 4 cut(s) 51, 263, 371, 373
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FaqI GGGAC 1 cut(s) 42
FauNDI CATATG 1 cut(s) 371
Fnu4HI GCNGC 2 cut(s) 108, 324
FokI GGATG 1 cut(s) 348
Fsp4HI GCNGC 2 cut(s) 108, 324
FspBI CTAG 1 cut(s) 255
GluI GCNGC 2 cut(s) 108, 324
HinfI GANTC 2 cut(s) 161, 363
HphI GGTGA 2 cut(s) 16, 305
Hpy188I TCNGA 4 cut(s) 76, 132, 172, 389
HpyCH4III ACNGT 2 cut(s) 67, 345
HpyCH4V TGCA 3 cut(s) 26, 189, 239
HpyF3I CTNAG 1 cut(s) 131
LpnPI CCDG 3 cut(s) 96, 191, 276
Lsp1109I GCAGC 1 cut(s) 94
LweI GCATC 4 cut(s) 13, 155, 176, 326
MaeI CTAG 1 cut(s) 255
MboII GAAGA 5 cut(s) 29, 32, 63, 358, 366
MluCI AATT 2 cut(s) 28, 273
MlyI GAGTC 1 cut(s) 357
MnlI CCTC 1 cut(s) 112
MseI TTAA 3 cut(s) 137, 282, 303
Mva1269I GAATGC 1 cut(s) 292
NdeI CATATG 1 cut(s) 371
NspV TTCGAA 1 cut(s) 92
PctI GAATGC 1 cut(s) 292
PfeI GAWTC 1 cut(s) 161
PkrI GCNGC 2 cut(s) 109, 325
PleI GAGTC 1 cut(s) 357
PpsI GAGTC 1 cut(s) 357
RsaI GTAC 2 cut(s) 204, 253
RsaNI GTAC 2 cut(s) 203, 252
SaqAI TTAA 3 cut(s) 137, 282, 303
SatI GCNGC 2 cut(s) 108, 324
ScaI AGTACT 1 cut(s) 253
SchI GAGTC 1 cut(s) 357
SetI ASST 1 cut(s) 123
SfaNI GCATC 4 cut(s) 13, 155, 176, 326
SfuI TTCGAA 1 cut(s) 92
SgeI CNNG 7 cut(s) 26, 123, 162, 169, 218, 267, 303
Sse9I AATT 2 cut(s) 28, 273
SsiI CCGC 1 cut(s) 324
SspI AATATT 2 cut(s) 232, 331
SspMI CTAG 1 cut(s) 255
StyI CCWWGG 1 cut(s) 156
TaaI ACNGT 2 cut(s) 67, 345
TaqI TCGA 1 cut(s) 92
TasI AATT 2 cut(s) 28, 273
TatI WGTACW 2 cut(s) 202, 251
TauI GCSGC 1 cut(s) 326
TfiI GAWTC 1 cut(s) 161
Tru1I TTAA 3 cut(s) 137, 282, 303
Tru9I TTAA 3 cut(s) 137, 282, 303
TscAI CASTG 1 cut(s) 72
TseI GCWGC 1 cut(s) 107
TspDTI ATGAA 4 cut(s) 23, 156, 189, 358
TspRI CASTG 1 cut(s) 72
XapI RAATTY 1 cut(s) 28
XspI CTAG 1 cut(s) 255
ZrmI AGTACT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.