Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002317

Physical Location & Seq

Genomic Coordinates Reverse (-)

17226973 .. 17234710

Gene Structure 7738 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g20550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGGGAGACAGTGAGACAGTCGTTGCTCAAACAAATGCAGTGATGGGATATCCATCAGCAGCCTATACAACGACAGGTTATTCTGATCCCAGCTCAAATATTTCTCAGGAGCCTACCACAGAAATTTCTGCTCCTGTAGATGCATCCCATCCAACACCTGGTGATGGACATGCATATTCTGTGGATTCTGATTCTGTCATGCAAGAATCACATACATATGCATCATATGAGGCTCAACCAGCTGTTGGTGTTACTGATGCTGGTGGGAATGTTGCTAGCAGTGAACATGAAGCCATGACATCATCACAAGCTGCCAGTTATGATGCTTCTGCTAATGGTGTTGCTACTTCTGGGGTGGGAACTGTTTCATCAGTTGGGAATGGAGATGCTTCAGACAACATGGCGGGATCAGTGGATACACAACAAGTTGTGGATGGTTCTGCTATGTCTGCAGAAGAAGATAGACTATGGAACATTGTGAGAGTAAACTCTTTAGATTTTAATGCCTGGACTGCTTTAATTGAAGAGACAGAGAAAGTTGCAGAGGATAACATTCTGAAAATTCGAAAAGTTTATGATGCTTTCCTGGCAGAGTTTCCTTTGTGTTATGGGTATTGGAAAAAGTATGCCGATCATGAGGCACGTTTTGGTGTTATTGATAAAGTTGTGGAGGTTTATGAACGAGCAGTTCAAGCTGTTACCTATTCAGTTGACATTTGGTTGCATTACTGCACATTTGCCACAAGTACATTTGGAGATCCAGACACTATTAGAAGGCTTTTTGAGCGAGGATTAGCGTATGTTGGAACAGATTACTTGTCCTTTCCTCTTTGGGACAGGTACATTGATTATGAATTTATGCAACAAGCATGGGGCCAGCTTGTCATGATTTACTCACGAATATTAGAGAATCCAAACCAACAGCTGGATCGTTATTTAAACAGTTTTAAGGAATTAGCCGGAAGTCGCCCTCTCTCAGAATTAAGAACTGCTGAAGAAGCTGCTGCAGCAGCAAGTGCATCTTCAGAGAATGGTGTGCAAGCAAACGGGGAAGAGGCTCAACCTGATGGCGCAGAACCATCTCCTGCTATCTTAACAGAAGCAGAGGAGCTGGAGAAGTTTATTGCCATTCGAGAAGAGACGTATAAAAAAGCTAAAGAGTTCGATTCAAAGATAATTAATTTTGAAACAGCTATTCGGAGGCCTTACTTTCACGTGAGGCCCCTTAATGCTGCAGAGCTTGAAAATTGGAACAACTATCTAGACTTTATTGAAAAGGAAGGTGACTTTAACAAGGTGGTCAAGTTGTATGAAAGATGCCTGATTGCGTGTGCTAATTATCCTGAATACTGGATTCGTTATGTCCTAAGTATGGAAACTAGTGGAAGTTTGGATCTTGCCAATAATGCTCTTGATCGTGCAACCCAGGTCTTTGTGAAGAGACAACCAGAGATTCACCTTTTTGCTGCTCGCTTCAAAGAGCAAAGTGGAGATATACCTGGTGCTCAGGCTGCCTATCAACTCGTACATTCTGAAATTTCACCTGGTCTTCTTGAAGCAATCATTAAGCATGCAAACATGGAACACCGTCTGGGAAATATGGAAGCTGCATACTCCTTGTTTGAACAGGCCATTGCCATTGAAAAAGGAAAGGAGAATTCTCAGACATTACCCGTGCTGTTTGCTCAATACGCTCGGTTCACATACTTGGTAACTTTGAATGCCAAAAAAGCCAGAGCAATCTTTCTTGAAGCGGTTGAGCATGTTCAATTGTCAAAAGCCTTCCTTGAGGCCCTAATACATTTTGAGTCGATACATCAGTTGCCAAAGCAAATTGACTATGTAGATTCCTTGGTTGTCAAGTTTCTGGAGCCCAATGTAGAGAACCCCAATTTTGCTAGTGTTGCTGACAGAGAAGAGTTATCTTGCATCTATTTGGAGTTTCTAAATCTCTTTGGAGATGCACAGTCTATCAAGAAGGCCGAGGATCGGCATGCTAAGCTATTTTTACTTCATAGGAGCAGCACATCAGAGTTAAAAAAACGGCAAGCTGAAGATTACCTATCTTCTGACAAAGGAAAGATGGCAAAATCCTACTCTGGTGTTCCTTCACCTGCCCAGTCTATTATGGGAGCATATCCAAATGCACAGAATCAGTGGGCAGCTGGTTATGGTGTGCAGCCTCAAGCTTGGCCACAAGCTACACAAGCACAGGGACAACAGTGGACCCCTGGTTATACCCAACAGGCATACAATGCATATGGTGGTTATCAGCAAGTACCGGCAGCGGTGCCACAGACTGCTGCTTATCCTGCTACATATCCCGCTGCCTATCCTGCGCAGCCGGCGGCTTACCCCCCACAAAGTTATGCACAGCCAGCAGCAGCAGCTGCCGGTGCTGTAGCAGCTGTTGCACCAGCTCAGCAACCTGCTCCGGCTCAACAGGCGTATTACGGGACCTACTACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

824

Amino Acids

90.76

Weight (kDa)

4.79

Isoelectric Point (pI)

42.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_PRP39_N	PF23240	154 - 318	1.1e-60	PRP39 N-terminal HAT repeat
Suf	PF05843	156 - 310	2.4e-13	Suppressor of forked protein (Suf)
HAT_Syf1_CNRKL1_N	PF23233	163 - 303	9.5e-08	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	206 - 267	2.4e-06	PRP39 C-terminal HAT repeat
Suf	PF05843	372 - 592	1.4e-08	Suppressor of forked protein (Suf)
HAT_PRP39_C	PF23241	391 - 530	2.6e-48	PRP39 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04080 AT1G04080 AT1G04080 AT1G04080 AT1G04080
fragaria_vesca	FvH4_2g20550
malus_domestica	MD00G1060100.v1.1
prunus_persica	Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1
pyrus_communis	pycom05g17390 pycom10g15270
rosa_chinensis	RchiOBHm_Chr1g0327141 RchiOBHm_Chr6g0282561 RchiOBHm_Chr6g0286711
rosa_laevigata	RLG00000007391 RLG00000012550 RLG00000030995
rosa_multiflora	Rmu_co8283097.1_g000001 Rmu_co8332197.1_g000001 Rmu_sc0001468.1_g000022
rosa_roxburghii	Rroxscaffold_1G00034270 Rroxscaffold_1G00060390 Rroxscaffold_7G00182090
rosa_rugosa	Rorug05G0468800 Rorug06G0182100 Rorug06G0182200
rosa_samantha	Rh2CG306300 Rh5BG355000 Rh5BG355100 Rh5BG357900 Rh6AG023000 Rh6AG294900 Rh6BG204700 Rh6BG298100 Rh6BG298200 Rh6CG298600 Rh6DG290600
rosa_wichuraiana	Rw1G013170 Rw5G035150 Rw6G025370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2122
Acc16I	TGCGCA	1 cut(s)	2340
Acc36I	ACCTGC	2 cut(s)	2122, 2437
AccB1I	GGYRCC	1 cut(s)	2290
AccB7I	CCANNNNNTGG	3 cut(s)	158, 245, 925
AciI	CCGC	5 cut(s)	404, 1754, 2288, 2325, 2348
AclWI	GGATC	6 cut(s)	80, 415, 752, 936, 1401, 1995
AcoI	YGGCCR	1 cut(s)	2192
AcsI	RAATTY	5 cut(s)	123, 561, 854, 1536, 1657
AcuI	CTGAAG	4 cut(s)	375, 1008, 1014, 2073
AcvI	CACGTG	1 cut(s)	1216
AdeI	CACNNNGTG	1 cut(s)	161
AfaI	GTAC	4 cut(s)	748, 842, 1527, 2280
AfiI	CCNNNNNNNGG	6 cut(s)	158, 164, 245, 925, 1372, 1989
AhlI	ACTAGT	1 cut(s)	1379
AjnI	CCWGG	7 cut(s)	157, 506, 585, 1425, 1498, 1543, 2230
Alw21I	GWGCWC	1 cut(s)	1507
Alw26I	GTCTC	4 cut(s)	8, 521, 1133, 1435
AlwI	GGATC	6 cut(s)	80, 415, 752, 936, 1401, 1995
AlwNI	CAGNNNCTG	1 cut(s)	2390
AoxI	GGCC	7 cut(s)	874, 1202, 1220, 1629, 1791, 1980, 2192
ApoI	RAATTY	5 cut(s)	123, 561, 854, 1536, 1657
AseI	ATTAAT	1 cut(s)	1179
Asp700I	GAANNNNTTC	1 cut(s)	364
AspLEI	GCGC	2 cut(s)	1073, 2341
AspS9I	GGNCC	5 cut(s)	874, 1221, 1792, 2226, 2457
AsuHPI	GGTGA	5 cut(s)	173, 1295, 1448, 1533, 2103
AsuII	TTCGAA	1 cut(s)	565
AsuNHI	GCTAGC	1 cut(s)	275
AvaII	GGWCC	2 cut(s)	2226, 2457
BaeI	ACNNNNGTAYC	2 cut(s)	1805, 1838
BalI	TGGCCA	1 cut(s)	2194
BanI	GGYRCC	1 cut(s)	2290
BanII	GRGCYC	1 cut(s)	1875
BbrPI	CACGTG	1 cut(s)	1216
BbsI	GAAGAC	1 cut(s)	1541
Bbv12I	GWGCWC	1 cut(s)	1507
BccI	CCATC	8 cut(s)	37, 61, 156, 158, 428, 1061, 1087, 2077
BceAI	ACGGC	1 cut(s)	2060
BciT130I	CCWGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
BciVI	GTATCC	1 cut(s)	409
BcoDI	GTCTC	4 cut(s)	8, 521, 1133, 1435
BcuI	ACTAGT	1 cut(s)	1379
BfaI	CTAG	4 cut(s)	276, 1262, 1380, 1899
BfmI	CTRYAG	5 cut(s)	135, 450, 1005, 1233, 2400
BfuAI	ACCTGC	2 cut(s)	2122, 2437
BfuI	GTATCC	1 cut(s)	409
BlpI	GCTNAGC	2 cut(s)	1998, 2421
Bme1390I	CCNGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
Bme18I	GGWCC	2 cut(s)	2226, 2457
BmgT120I	GGNCC	5 cut(s)	874, 1221, 1792, 2226, 2457
BmiI	GGNNCC	7 cut(s)	111, 875, 1223, 1872, 2228, 2292, 2458
BmrFI	CCNGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
BmrI	ACTGGG	1 cut(s)	2113
BmtI	GCTAGC	1 cut(s)	279
BmuI	ACTGGG	1 cut(s)	2113
BpiI	GAAGAC	1 cut(s)	1541
BpmI	CTGGAG	2 cut(s)	1133, 1889
Bpu10I	CCTNAGC	1 cut(s)	1506
Bpu1102I	GCTNAGC	2 cut(s)	1998, 2421
Bpu14I	TTCGAA	1 cut(s)	565
BpuEI	CTTGAG	2 cut(s)	1808, 2169
BsaAI	YACGTR	1 cut(s)	1216
BsaBI	GATNNNNATC	1 cut(s)	52
BsaJI	CCNNGG	4 cut(s)	1425, 1851, 1983, 2230
Bsc4I	CCNNNNNNNGG	6 cut(s)	158, 164, 245, 925, 1372, 1989
Bse118I	RCCGGY	3 cut(s)	2281, 2344, 2393
Bse1I	ACTGG	4 cut(s)	315, 1355, 2119, 2467
Bse3DI	GCAATG	1 cut(s)	1632
Bse8I	GATNNNNATC	1 cut(s)	52
BseBI	CCWGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
BseDI	CCNNGG	4 cut(s)	1425, 1851, 1983, 2230
BseGI	GGATG	3 cut(s)	143, 148, 439
BseJI	GATNNNNATC	1 cut(s)	52
BseLI	CCNNNNNNNGG	6 cut(s)	158, 164, 245, 925, 1372, 1989
BseMI	GCAATG	1 cut(s)	1632
BseMII	CTCAG	5 cut(s)	119, 990, 1520, 1676, 2435
BseNI	ACTGG	4 cut(s)	315, 1355, 2119, 2467
BseRI	GAGGAG	1 cut(s)	1121
BseYI	CCCAGC	1 cut(s)	89
BsgI	GTGCAG	2 cut(s)	715, 2198
BshFI	GGCC	7 cut(s)	876, 1204, 1222, 1631, 1793, 1982, 2194
BshNI	GGYRCC	1 cut(s)	2290
BsiHKAI	GWGCWC	1 cut(s)	1507
BsiSI	CCGG	5 cut(s)	960, 2282, 2345, 2394, 2435
BslFI	GGGAC	2 cut(s)	848, 2229
BslI	CCNNNNNNNGG	6 cut(s)	158, 164, 245, 925, 1372, 1989
BsmAI	GTCTC	4 cut(s)	8, 521, 1133, 1435
BsmBI	CGTCTC	1 cut(s)	1133
BsmFI	GGGAC	2 cut(s)	848, 2229
BsmI	GAATGC	1 cut(s)	1726
BsnI	GGCC	7 cut(s)	876, 1204, 1222, 1631, 1793, 1982, 2194
Bsp119I	TTCGAA	1 cut(s)	565
Bsp1286I	GDGCHC	2 cut(s)	1507, 1875
Bsp143I	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
Bsp1720I	GCTNAGC	2 cut(s)	1998, 2421
BspACI	CCGC	5 cut(s)	404, 1754, 2288, 2325, 2348
BspANI	GGCC	7 cut(s)	876, 1204, 1222, 1631, 1793, 1982, 2194
BspCNI	CTCAG	5 cut(s)	118, 989, 1519, 1675, 2434
BspHI	TCATGA	2 cut(s)	634, 885
BspLI	GGNNCC	7 cut(s)	111, 875, 1223, 1872, 2228, 2292, 2458
BspMAI	CTGCAG	3 cut(s)	454, 1009, 1237
BspMI	ACCTGC	2 cut(s)	2122, 2437
BspOI	GCTAGC	1 cut(s)	279
BspPI	GGATC	6 cut(s)	80, 415, 752, 936, 1401, 1995
BspT104I	TTCGAA	1 cut(s)	565
BspT107I	GGYRCC	1 cut(s)	2290
BsrDI	GCAATG	1 cut(s)	1632
BsrFI	RCCGGY	3 cut(s)	2281, 2344, 2393
BsrI	ACTGG	4 cut(s)	315, 1355, 2119, 2467
BssAI	RCCGGY	3 cut(s)	2281, 2344, 2393
BssECI	CCNNGG	4 cut(s)	1425, 1851, 1983, 2230
BssMI	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
BssT1I	CCWWGG	1 cut(s)	1851
Bst2UI	CCWGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
Bst4CI	ACNGT	7 cut(s)	11, 19, 364, 944, 1589, 1968, 2223
Bst6I	CTCTTC	5 cut(s)	519, 1047, 1131, 1433, 1911
BstAPI	GCANNNNNTGC	4 cut(s)	1016, 2255, 2390, 2411
BstBAI	YACGTR	1 cut(s)	1216
BstBI	TTCGAA	1 cut(s)	565
BstC8I	GCNNGC	9 cut(s)	277, 878, 1041, 1471, 1572, 1995, 2049, 2346, 2379
BstDEI	CTNAG	7 cut(s)	105, 976, 1367, 1506, 1662, 1998, 2421
BstF5I	GGATG	3 cut(s)	143, 148, 439
BstHHI	GCGC	2 cut(s)	1073, 2341
BstKTI	GATC	8 cut(s)	88, 410, 634, 760, 931, 1396, 1417, 1990
BstMAI	GTCTC	4 cut(s)	8, 521, 1133, 1435
BstMBI	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
BstNI	CCWGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
BstNSI	RCATGY	4 cut(s)	173, 1574, 1766, 1997
BstSCI	CCNGG	7 cut(s)	157, 506, 585, 1425, 1498, 1543, 2230
BstSFI	CTRYAG	5 cut(s)	135, 450, 1005, 1233, 2400
BstV2I	GAAGAC	1 cut(s)	1541
BstX2I	RGATCY	2 cut(s)	757, 1393
BstYI	RGATCY	2 cut(s)	757, 1393
BsuI	GTATCC	1 cut(s)	409
BsuRI	GGCC	7 cut(s)	876, 1204, 1222, 1631, 1793, 1982, 2194
BtsCI	GGATG	3 cut(s)	143, 148, 439
BtsI	GCAGTG	2 cut(s)	45, 286
BtsIMutI	CAGTG	6 cut(s)	16, 45, 286, 417, 2162, 2228
BveI	ACCTGC	2 cut(s)	2122, 2437
Cac8I	GCNNGC	9 cut(s)	277, 878, 1041, 1471, 1572, 1995, 2049, 2346, 2379
CaiI	CAGNNNCTG	1 cut(s)	2390
CciI	TCATGA	2 cut(s)	634, 885
CfoI	GCGC	2 cut(s)	1073, 2341
Cfr10I	RCCGGY	3 cut(s)	2281, 2344, 2393
Cfr13I	GGNCC	5 cut(s)	874, 1221, 1792, 2226, 2457
CsiI	ACCWGGT	3 cut(s)	157, 1498, 1543
Csp6I	GTAC	4 cut(s)	747, 841, 1526, 2279
CviQI	GTAC	4 cut(s)	747, 841, 1526, 2279
DdeI	CTNAG	7 cut(s)	105, 976, 1367, 1506, 1662, 1998, 2421
DpnI	GATC	8 cut(s)	87, 409, 633, 759, 930, 1395, 1416, 1989
DpnII	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
DraI	TTTAAA	1 cut(s)	939
DraIII	CACNNNGTG	1 cut(s)	161
EaeI	YGGCCR	1 cut(s)	2192
Eam1104I	CTCTTC	5 cut(s)	519, 1047, 1131, 1433, 1911
EarI	CTCTTC	5 cut(s)	519, 1047, 1131, 1433, 1911
Eco130I	CCWWGG	1 cut(s)	1851
Eco147I	AGGCCT	1 cut(s)	1204
Eco24I	GRGCYC	1 cut(s)	1875
Eco32I	GATATC	1 cut(s)	50
Eco47I	GGWCC	2 cut(s)	2226, 2457
Eco57I	CTGAAG	4 cut(s)	375, 1008, 1014, 2073
Eco72I	CACGTG	1 cut(s)	1216
EcoO109I	RGGNCCY	3 cut(s)	1221, 1792, 2457
EcoRI	GAATTC	1 cut(s)	1657
EcoRII	CCWGG	7 cut(s)	157, 506, 585, 1425, 1498, 1543, 2230
EcoRV	GATATC	1 cut(s)	50
EcoT14I	CCWWGG	1 cut(s)	1851
EcoT22I	ATGCAT	4 cut(s)	145, 175, 223, 2260
EcoT38I	GRGCYC	1 cut(s)	1875
ErhI	CCWWGG	1 cut(s)	1851
Esp3I	CGTCTC	1 cut(s)	1133
FalI	AAGNNNNNCTT	4 cut(s)	1006, 1038, 1770, 1802
FaqI	GGGAC	2 cut(s)	848, 2229
FauI	CCCGC	2 cut(s)	397, 2332
FauNDI	CATATG	3 cut(s)	217, 226, 2260
FokI	GGATG	3 cut(s)	130, 135, 446
FriOI	GRGCYC	1 cut(s)	1875
FspBI	CTAG	4 cut(s)	276, 1262, 1380, 1899
FspI	TGCGCA	1 cut(s)	2340
GlaI	GCGC	2 cut(s)	1072, 2340
GsaI	CCCAGC	1 cut(s)	93
GsuI	CTGGAG	2 cut(s)	1133, 1889
HaeIII	GGCC	7 cut(s)	876, 1204, 1222, 1631, 1793, 1982, 2194
HapII	CCGG	5 cut(s)	960, 2282, 2345, 2394, 2435
HhaI	GCGC	2 cut(s)	1073, 2341
Hin6I	GCGC	2 cut(s)	1071, 2339
HinP1I	GCGC	2 cut(s)	1071, 2339
HincII	GTYRAC	1 cut(s)	712
HindII	GTYRAC	1 cut(s)	712
HindIII	AAGCTT	1 cut(s)	2187
HpaII	CCGG	5 cut(s)	960, 2282, 2345, 2394, 2435
HphI	GGTGA	5 cut(s)	173, 1295, 1448, 1533, 2103
Hpy166II	GTNNAC	5 cut(s)	284, 487, 712, 1701, 2226
Hpy8I	GTNNAC	5 cut(s)	284, 487, 712, 1701, 2226
HpyAV	CCTTC	5 cut(s)	768, 1274, 1792, 1972, 2118
HpyCH4III	ACNGT	7 cut(s)	11, 19, 364, 944, 1589, 1968, 2223
HpyCH4IV	ACGT	3 cut(s)	643, 1142, 1215
HpyF3I	CTNAG	7 cut(s)	105, 976, 1367, 1506, 1662, 1998, 2421
HpySE526I	ACGT	3 cut(s)	643, 1142, 1215
HspAI	GCGC	2 cut(s)	1071, 2339
KroI	GCCGGC	1 cut(s)	2344
KroNI	GCCGGC	1 cut(s)	2346
Kzo9I	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
LmnI	GCTCC	7 cut(s)	109, 136, 1108, 1870, 2019, 2132, 2437
MabI	ACCWGGT	3 cut(s)	157, 1498, 1543
MaeI	CTAG	4 cut(s)	276, 1262, 1380, 1899
MaeII	ACGT	3 cut(s)	643, 1142, 1215
MaeIII	GTNAC	4 cut(s)	250, 697, 1283, 1711
MalI	GATC	8 cut(s)	87, 409, 633, 759, 930, 1395, 1416, 1989
MboI	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
MfeI	CAATTG	1 cut(s)	1769
MflI	RGATCY	2 cut(s)	757, 1393
MhlI	GDGCHC	2 cut(s)	1507, 1875
MlsI	TGGCCA	1 cut(s)	2194
MluNI	TGGCCA	1 cut(s)	2194
MlyI	GAGTC	1 cut(s)	1817
MmeI	TCCRAC	2 cut(s)	176, 784
Mox20I	TGGCCA	1 cut(s)	2194
Mph1103I	ATGCAT	4 cut(s)	145, 175, 223, 2260
MroNI	GCCGGC	1 cut(s)	2344
MroXI	GAANNNNTTC	1 cut(s)	364
MscI	TGGCCA	1 cut(s)	2194
MslI	CAYNNNNRTG	1 cut(s)	216
Msp20I	TGGCCA	1 cut(s)	2194
MspA1I	CMGCKG	7 cut(s)	242, 925, 2165, 2288, 2327, 2390, 2408
MspI	CCGG	5 cut(s)	960, 2282, 2345, 2394, 2435
MspR9I	CCNGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
MunI	CAATTG	1 cut(s)	1769
Mva1269I	GAATGC	1 cut(s)	1726
MvaI	CCWGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
NaeI	GCCGGC	1 cut(s)	2346
NdeI	CATATG	3 cut(s)	217, 226, 2260
NdeII	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
NgoMIV	GCCGGC	1 cut(s)	2344
NheI	GCTAGC	1 cut(s)	275
NlaIV	GGNNCC	7 cut(s)	111, 875, 1223, 1872, 2228, 2292, 2458
NmeAIII	GCCGAG	1 cut(s)	2008
NmuCI	GTSAC	1 cut(s)	1283
NsbI	TGCGCA	1 cut(s)	2340
NsiI	ATGCAT	4 cut(s)	145, 175, 223, 2260
NspI	RCATGY	4 cut(s)	173, 1574, 1766, 1997
NspV	TTCGAA	1 cut(s)	565
PaeI	GCATGC	2 cut(s)	1574, 1997
PagI	TCATGA	2 cut(s)	634, 885
PaqCI	CACCTGC	1 cut(s)	2122
PceI	AGGCCT	1 cut(s)	1204
PctI	GAATGC	1 cut(s)	1726
PdiI	GCCGGC	1 cut(s)	2346
PdmI	GAANNNNTTC	1 cut(s)	364
PfeI	GAWTC	9 cut(s)	185, 191, 206, 910, 1166, 1354, 1453, 1847, 2152
PflMI	CCANNNNNTGG	3 cut(s)	158, 245, 925
PleI	GAGTC	1 cut(s)	1816
PmaCI	CACGTG	1 cut(s)	1216
PmlI	CACGTG	1 cut(s)	1216
PpsI	GAGTC	1 cut(s)	1816
Ppu21I	YACGTR	1 cut(s)	1216
PpuMI	RGGWCCY	1 cut(s)	2457
PshBI	ATTAAT	1 cut(s)	1179
Psp5II	RGGWCCY	1 cut(s)	2457
Psp6I	CCWGG	7 cut(s)	157, 506, 585, 1425, 1498, 1543, 2230
PspCI	CACGTG	1 cut(s)	1216
PspFI	CCCAGC	1 cut(s)	89
PspGI	CCWGG	7 cut(s)	157, 506, 585, 1425, 1498, 1543, 2230
PspN4I	GGNNCC	7 cut(s)	111, 875, 1223, 1872, 2228, 2292, 2458
PspPI	GGNCC	5 cut(s)	874, 1221, 1792, 2226, 2457
PspPPI	RGGWCCY	1 cut(s)	2457
PstI	CTGCAG	3 cut(s)	454, 1009, 1237
PstNI	CAGNNNCTG	1 cut(s)	2390
PsuI	RGATCY	2 cut(s)	757, 1393
PvuII	CAGCTG	5 cut(s)	242, 925, 2165, 2390, 2408
RsaI	GTAC	4 cut(s)	748, 842, 1527, 2280
RsaNI	GTAC	4 cut(s)	747, 841, 1526, 2279
RseI	CAYNNNNRTG	1 cut(s)	216
Sau3AI	GATC	8 cut(s)	85, 407, 631, 757, 928, 1393, 1414, 1987
Sau96I	GGNCC	5 cut(s)	874, 1221, 1792, 2226, 2457
SchI	GAGTC	1 cut(s)	1817
ScrFI	CCNGG	7 cut(s)	159, 508, 587, 1427, 1500, 1545, 2232
SduI	GDGCHC	2 cut(s)	1507, 1875
SexAI	ACCWGGT	3 cut(s)	157, 1498, 1543
SfcI	CTRYAG	5 cut(s)	135, 450, 1005, 1233, 2400
SfuI	TTCGAA	1 cut(s)	565
SinI	GGWCC	2 cut(s)	2226, 2457
SmiMI	CAYNNNNRTG	1 cut(s)	216
SmlI	CTYRAG	2 cut(s)	1787, 2184
SmoI	CTYRAG	2 cut(s)	1787, 2184
SpeI	ACTAGT	1 cut(s)	1379
SphI	GCATGC	2 cut(s)	1574, 1997
SseBI	AGGCCT	1 cut(s)	1204
SsiI	CCGC	5 cut(s)	404, 1754, 2288, 2325, 2348
SspI	AATATT	2 cut(s)	100, 903
SspMI	CTAG	4 cut(s)	276, 1262, 1380, 1899
StuI	AGGCCT	1 cut(s)	1204
StyD4I	CCNGG	7 cut(s)	157, 506, 585, 1425, 1498, 1543, 2230
StyI	CCWWGG	1 cut(s)	1851
TaaI	ACNGT	7 cut(s)	11, 19, 364, 944, 1589, 1968, 2223
TaiI	ACGT	3 cut(s)	646, 1145, 1218
TaqI	TCGA	4 cut(s)	565, 1132, 1164, 1811
TatI	WGTACW	1 cut(s)	746
TauI	GCSGC	1 cut(s)	2351
TfiI	GAWTC	9 cut(s)	185, 191, 206, 910, 1166, 1354, 1453, 1847, 2152
TscAI	CASTG	6 cut(s)	16, 45, 286, 417, 2162, 2228
TseFI	GTSAC	1 cut(s)	1283
Tsp45I	GTSAC	1 cut(s)	1283
TspDTI	ATGAA	6 cut(s)	303, 357, 693, 867, 1326, 2003
TspRI	CASTG	6 cut(s)	16, 45, 286, 417, 2162, 2228
Van91I	CCANNNNNTGG	3 cut(s)	158, 245, 925
VpaK11BI	GGWCC	2 cut(s)	2226, 2457
VspI	ATTAAT	1 cut(s)	1179
XapI	RAATTY	5 cut(s)	123, 561, 854, 1536, 1657
XbaI	TCTAGA	1 cut(s)	1261
XceI	RCATGY	4 cut(s)	173, 1574, 1766, 1997
XcmI	CCANNNNNNNNNTGG	1 cut(s)	155
XmnI	GAANNNNTTC	1 cut(s)	364
XspI	CTAG	4 cut(s)	276, 1262, 1380, 1899
Zsp2I	ATGCAT	4 cut(s)	145, 175, 223, 2260

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.