Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0002317

Physical Location & Seq

Genomic Coordinates Reverse (-)

20545445 .. 20553377

Gene Structure 7933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g17390.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGGCAGACAGTGAGACAGTTGTTGCTCAAACATCTGATGTGATGGGGTATACATCAGCAGGATATGCTGATGCCAGCTCAAATATTGCTCCTGATACGGGTGCGTTGCATTCTGAGGCTACCCCAGAGTTTTCTACCACGCCTGGTGGTTCTAGCATAGGCGATGGAAATGCATATTCTGCGGATCTCAATTCTCTCATGCAAGAATCACAAAGTTACACAACATATGAGACCAAACCGGCTGTTGGAGTGACAGATGCTAGTGGGAATGTTGCTAGTAATGAAAATGAAGTCTTGGAGTCATCTCAAGTTGCTAGTTATGATTCTTCTATGAATGGTGTTATTGCTTCTGGAGTGGGAACTGTTTCATCAGTTGATAATGGAGATGCTTCAGATAATGCTAAACCTCTTGATCCGCAACAATTTGGGGATGCTTCTGCCATGTCTGTTGAAGAAGATAGACTGTGGAATATTGTGAGGGCTAATTCCTTGGATTTCAATTCCTGGACTGCTTTAATTGAAGAGACAGAGAGGGTTGCAGAGGATAACATATTGAAAATTCGGAAAGTTTATGATGCATTTTTAGCAGAGTTTCCGTTGTGTTATGGTTATTGGAAAAAGTATGCAGATCATGAGGCACGTCTAGGTTCTATCGATAAAGTTGTGGAGGTCTATGAACGAGCAGTTCAAGGTGTTACCTATTCAGTTGATATCTGGTTGCATTACTGCATTTTTGCTATAAACACATATGGAGATCCAGACACTGTCAGAAGGTTGTTTGAGCGAGGACTTGCTTATGTTGGAACAGATTACCTATCATTTACTCTTTGGGATAAGTACATAGAATATGAGTACATGCAGCAGGAGTGGGGCCGCCTTGCCATGATCTATTCACGAATATTAGAGAACCCAAATCAGCAATTGGATCGGTATTGGAACAGTTTTAAGGAGTTAGCTGGAAGTCGGCCACTCTCAGAATTGAGGACTGCCGAAGAAGCTGCAGCTGCAGCAGGTGCACATTCAGAGGGCAGTGACAAAGTAAATGGGGAAGAGGTTCAATCTGATGGTGCAGAACAATCTCCTAAACCTGTAAGTGCTGGTTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCACCATTAGAGAAGAGGTGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTAGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCACGTGCGGCCTCTCAATTCTGTAGAGCTTGAAAATTGGACCAGCTACCTAGACTATATAGAAAGGGAAGGCGACTTGAACAAGGTAGTCAAGTTATATGAAAGGTGCCTAATTGCTTGTGCTAATTATCCTGAATACTGGATTCGATATGTTCTATGCATGGAGGCCAGTGGAAGTGTGGACATTGCTAATAATGCTCTTGCTCGTGCAACCCAGGTCTTTGTGAAGAGACAACCGGAGATTCACCTTTTTGCTGCTCGATTCAAAGAGCAGAGTGGGGATATACCTGGTGCTCAAGCTGCCTATCAACTTGTACATTCTGAACTCTCACCTGGTCTTCTTGAAGCAATCGTGAAGCATGCAAATATGGAACACCGTTTGGGAAATGTGGAAGCGGCCTACTCTTTGTACGAACAGGCCATTGCCATTGAAAAAGGAAAAGAGCATTCACAGACGTTACCCATGTTGTACGCTCAGTACTCTCGGTTCACTTACCTGGTTTCTTCGAATGAAGAAAAAGCTAGAGAAATTTTAGATGGGGCACTCGAGCATATACAATTGTCAAGAGCATTTCTTGAGTCCATGATAGTTTTCGAGACAATACAGCCACTGCCAAAGCGAATCGATCACATAGATTCGTTAGTTGTGAAGTTCATAGAGCCCAGCTCAGAAAGCCCCAATTTTGCTAGCGTTACTGACAGGGAAGAGCTATCTGGCATCTATTTGGAGTTTGTTAATCTCTTTGGAGATGCAGAGTCTATCAAGAAGGCTGAGGACCGACATGCTAAGCTCTTCTTACCTCATCGGAGCAGCACATCAGAGTTGAAAAAACGTCAAGCGGAGGACTTTTTATCTTCCGATAAAGTGAAGCTAGCTAAAGCTTACTCTGGTGTTCCATCCCCCGTCCAGTCGGTCATGGGAGCATATCCAAATACACAGAACCAATGGCCATCTGGTTACGGTGTGCAGCCTCAAGCTTGGCCACCAGCTACGCAAGCTACACAGGGACAACAGTGGCCAGCTGGTTATACCCAACAGCCGTACAATGCATATAGTGGTTATGGAGCTGGCTACACTAATCCCCAAGCACCCGCGGTGGCGCCACAAACTGCTGCTTATGGTGCTTATCCTTCTACATATCCTCCTCAGCAGGCCGTCCCGCCTCAAAGTTACGCACATCCAGCCGCGGCAGCAGTAGCACCGGCTCCGCAACCTGCTTCAACTCCTCAGGCGTATTATGGGAGTTACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

825

Amino Acids

91.28

Weight (kDa)

4.77

Isoelectric Point (pI)

44.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04080 AT1G04080 AT1G04080 AT1G04080 AT1G04080
fragaria_vesca	FvH4_2g20550
malus_domestica	MD00G1060100.v1.1
prunus_persica	Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1
pyrus_communis	pycom05g17390 pycom10g15270
rosa_chinensis	RchiOBHm_Chr1g0327141 RchiOBHm_Chr6g0282561 RchiOBHm_Chr6g0286711
rosa_laevigata	RLG00000007391 RLG00000012550 RLG00000030995
rosa_multiflora	Rmu_co8283097.1_g000001 Rmu_co8332197.1_g000001 Rmu_sc0001468.1_g000022
rosa_roxburghii	Rroxscaffold_1G00034270 Rroxscaffold_1G00060390 Rroxscaffold_7G00182090
rosa_rugosa	Rorug05G0468800 Rorug06G0182100 Rorug06G0182200
rosa_samantha	Rh2CG306300 Rh5BG355000 Rh5BG355100 Rh5BG357900 Rh6AG023000 Rh6AG294900 Rh6BG204700 Rh6BG298100 Rh6BG298200 Rh6CG298600 Rh6DG290600
rosa_wichuraiana	Rw1G013170 Rw5G035150 Rw6G025370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1001
Acc36I	ACCTGC	2 cut(s)	1001, 2443
AccB1I	GGYRCC	2 cut(s)	1326, 2320
AccI	GTMKAC	1 cut(s)	50
AccII	CGCG	2 cut(s)	2315, 2408
AclWI	GGATC	4 cut(s)	192, 407, 749, 933
AcoI	YGGCCR	4 cut(s)	965, 2168, 2201, 2237
AcsI	RAATTY	2 cut(s)	558, 1749
AcuI	CTGAAG	1 cut(s)	375
AcvI	CACGTG	1 cut(s)	1225
AcyI	GRCGYC	1 cut(s)	2321
AfaI	GTAC	7 cut(s)	839, 854, 1536, 1631, 1691, 1700, 2264
AfiI	CCNNNNNNNGG	2 cut(s)	98, 245
AjiI	CACGTC	1 cut(s)	641
AjnI	CCWGG	6 cut(s)	142, 503, 1434, 1507, 1552, 1716
Alw21I	GWGCWC	2 cut(s)	1018, 1516
Alw26I	GTCTC	5 cut(s)	8, 224, 518, 1444, 1811
Alw44I	GTGCAC	1 cut(s)	1014
AlwI	GGATC	4 cut(s)	192, 407, 749, 933
AlwNI	CAGNNNCTG	2 cut(s)	764, 1831
Ama87I	CYCGRG	1 cut(s)	1766
ApaLI	GTGCAC	1 cut(s)	1014
ApoI	RAATTY	2 cut(s)	558, 1749
Asp700I	GAANNNNTTC	2 cut(s)	364, 1053
AspLEI	GCGC	1 cut(s)	2323
AspS9I	GGNCC	4 cut(s)	871, 1212, 1260, 1996
AsuHPI	GGTGA	3 cut(s)	1126, 1457, 1542
AsuII	TTCGAA	1 cut(s)	1727
AsuNHI	GCTAGC	2 cut(s)	1907, 2092
AvaI	CYCGRG	1 cut(s)	1766
AvaII	GGWCC	2 cut(s)	1260, 1996
AxyI	CCTNAGG	1 cut(s)	2448
BaeGI	GKGCMC	2 cut(s)	1018, 1765
BalI	TGGCCA	3 cut(s)	2170, 2203, 2239
BanI	GGYRCC	2 cut(s)	1326, 2320
BanII	GRGCYC	1 cut(s)	1884
BauI	CACGAG	1 cut(s)	1425
BbrPI	CACGTG	1 cut(s)	1225
BbsI	GAAGAC	1 cut(s)	1550
Bbv12I	GWGCWC	2 cut(s)	1018, 1516
BbvCI	CCTCAGC	2 cut(s)	1992, 2367
BccI	CCATC	6 cut(s)	37, 158, 1058, 1751, 2125, 2179
BceAI	ACGGC	2 cut(s)	2245, 2360
BcgI	CGANNNNNNTGC	6 cut(s)	152, 186, 908, 942, 980, 1014
BciT130I	CCWGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
BcoDI	GTCTC	5 cut(s)	8, 224, 518, 1444, 1811
BfaI	CTAG	9 cut(s)	153, 261, 276, 315, 644, 1271, 1743, 1908, 2093
BfmI	CTRYAG	3 cut(s)	999, 1005, 1242
BfoI	RGCGCY	1 cut(s)	2324
BfuAI	ACCTGC	2 cut(s)	1001, 2443
BlpI	GCTNAGC	1 cut(s)	2007
BmcAI	AGTACT	1 cut(s)	1700
Bme1390I	CCNGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
Bme18I	GGWCC	2 cut(s)	1260, 1996
BmeT110I	CYCGRG	1 cut(s)	1766
BmgBI	CACGTC	1 cut(s)	641
BmgT120I	GGNCC	4 cut(s)	871, 1212, 1260, 1996
BmiI	GGNNCC	4 cut(s)	872, 1328, 2322, 2427
BmrFI	CCNGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
BmsI	GCATC	7 cut(s)	61, 247, 376, 421, 565, 1947, 1960
BmtI	GCTAGC	2 cut(s)	1911, 2096
BpiI	GAAGAC	1 cut(s)	1550
BplI	GAGNNNNNCTC	2 cut(s)	1871, 1903
BpmI	CTGGAG	1 cut(s)	372
Bpu10I	CCTNAGC	2 cut(s)	1992, 2367
Bpu1102I	GCTNAGC	1 cut(s)	2007
Bpu14I	TTCGAA	1 cut(s)	1727
BpuEI	CTTGAG	4 cut(s)	291, 1500, 1817, 2178
Bsa29I	ATCGAT	2 cut(s)	654, 1845
BsaAI	YACGTR	1 cut(s)	1225
BsaHI	GRCGYC	1 cut(s)	2321
BsaI	GGTCTC	1 cut(s)	224
BsaJI	CCNNGG	4 cut(s)	489, 1434, 2313, 2406
BsaWI	WCCGGW	1 cut(s)	1456
BsaXI	ACNNNNNCTCC	2 cut(s)	2347, 2377
Bsc4I	CCNNNNNNNGG	2 cut(s)	98, 245
Bse118I	RCCGGY	2 cut(s)	238, 2422
Bse1I	ACTGG	3 cut(s)	1364, 1389, 2128
Bse21I	CCTNAGG	1 cut(s)	2448
Bse3DI	GCAATG	2 cut(s)	1404, 1641
BseBI	CCWGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
BseCI	ATCGAT	2 cut(s)	654, 1845
BseDI	CCNNGG	4 cut(s)	489, 1434, 2313, 2406
BseGI	GGATG	3 cut(s)	436, 2117, 2398
BseLI	CCNNNNNNNGG	2 cut(s)	98, 245
BseMI	GCAATG	2 cut(s)	1404, 1641
BseMII	CTCAG	7 cut(s)	105, 987, 1709, 1902, 1983, 2381, 2462
BseNI	ACTGG	3 cut(s)	1364, 1389, 2128
BseRI	GAGGAG	3 cut(s)	1130, 2355, 2436
BseSI	GKGCMC	2 cut(s)	1018, 1765
BseYI	CCCAGC	1 cut(s)	1883
BsgI	GTGCAG	2 cut(s)	1089, 2207
Bsh1236I	CGCG	2 cut(s)	2315, 2408
BshNI	GGYRCC	2 cut(s)	1326, 2320
BshVI	ATCGAT	2 cut(s)	654, 1845
BsiHKAI	GWGCWC	2 cut(s)	1018, 1516
BsiHKCI	CYCGRG	1 cut(s)	1766
BsiSI	CCGG	3 cut(s)	239, 1457, 2423
BslFI	GGGAC	2 cut(s)	2241, 2363
BslI	CCNNNNNNNGG	2 cut(s)	98, 245
BsmAI	GTCTC	5 cut(s)	8, 224, 518, 1444, 1811
BsmFI	GGGAC	2 cut(s)	2241, 2363
BsmI	GAATGC	2 cut(s)	109, 1666
Bso31I	GGTCTC	1 cut(s)	224
BsoBI	CYCGRG	1 cut(s)	1766
Bsp119I	TTCGAA	1 cut(s)	1727
Bsp1286I	GDGCHC	4 cut(s)	1018, 1516, 1765, 1884
Bsp1407I	TGTACA	1 cut(s)	1534
Bsp143I	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
Bsp1720I	GCTNAGC	1 cut(s)	2007
BspCNI	CTCAG	7 cut(s)	106, 986, 1708, 1901, 1984, 2380, 2461
BspDI	ATCGAT	2 cut(s)	654, 1845
BspFNI	CGCG	2 cut(s)	2315, 2408
BspHI	TCATGA	1 cut(s)	631
BspLI	GGNNCC	4 cut(s)	872, 1328, 2322, 2427
BspMAI	CTGCAG	2 cut(s)	1003, 1009
BspMI	ACCTGC	2 cut(s)	1001, 2443
BspOI	GCTAGC	2 cut(s)	1911, 2096
BspPI	GGATC	4 cut(s)	192, 407, 749, 933
BspQI	GCTCTTC	2 cut(s)	1920, 2018
BspT104I	TTCGAA	1 cut(s)	1727
BspT107I	GGYRCC	2 cut(s)	1326, 2320
BspTNI	GGTCTC	1 cut(s)	224
BsrDI	GCAATG	2 cut(s)	1404, 1641
BsrFI	RCCGGY	2 cut(s)	238, 2422
BsrGI	TGTACA	1 cut(s)	1534
BsrI	ACTGG	3 cut(s)	1364, 1389, 2128
BssAI	RCCGGY	2 cut(s)	238, 2422
BssECI	CCNNGG	4 cut(s)	489, 1434, 2313, 2406
BssMI	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
BssNAI	GTATAC	1 cut(s)	51
BssNI	GRCGYC	1 cut(s)	2321
BssSI	CACGAG	1 cut(s)	1425
BssT1I	CCWWGG	1 cut(s)	489
Bst1107I	GTATAC	1 cut(s)	51
Bst2BI	CACGAG	1 cut(s)	1425
Bst2UI	CCWGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
Bst4CI	ACNGT	9 cut(s)	11, 19, 364, 465, 766, 941, 1598, 2183, 2235
Bst6I	CTCTTC	6 cut(s)	516, 1044, 1140, 1442, 1920, 2018
BstACI	GRCGYC	1 cut(s)	2321
BstAPI	GCANNNNNTGC	3 cut(s)	65, 179, 1013
BstAUI	TGTACA	1 cut(s)	1534
BstBAI	YACGTR	1 cut(s)	1225
BstBI	TTCGAA	1 cut(s)	1727
BstC8I	GCNNGC	8 cut(s)	76, 1581, 1909, 2094, 2217, 2241, 2290, 2373
BstDEI	CTNAG	9 cut(s)	114, 973, 1179, 1695, 1888, 1992, 2007, 2367, 2448
BstDSI	CCRYGG	2 cut(s)	2313, 2406
BstF5I	GGATG	3 cut(s)	436, 2117, 2398
BstFNI	CGCG	2 cut(s)	2315, 2408
BstH2I	RGCGCY	1 cut(s)	2324
BstHHI	GCGC	1 cut(s)	2323
BstKTI	GATC	8 cut(s)	187, 415, 631, 757, 888, 928, 1185, 1849
BstMAI	GTCTC	5 cut(s)	8, 224, 518, 1444, 1811
BstMBI	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
BstNI	CCWGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
BstNSI	RCATGY	3 cut(s)	859, 1583, 2006
BstSCI	CCNGG	6 cut(s)	142, 503, 1434, 1507, 1552, 1716
BstSFI	CTRYAG	3 cut(s)	999, 1005, 1242
BstSLI	GKGCMC	2 cut(s)	1018, 1765
BstUI	CGCG	2 cut(s)	2315, 2408
BstV2I	GAAGAC	1 cut(s)	1550
BstX2I	RGATCY	2 cut(s)	184, 754
BstYI	RGATCY	2 cut(s)	184, 754
BstZ17I	GTATAC	1 cut(s)	51
Bsu15I	ATCGAT	2 cut(s)	654, 1845
Bsu36I	CCTNAGG	1 cut(s)	2448
BsuTUI	ATCGAT	2 cut(s)	654, 1845
BtgI	CCRYGG	2 cut(s)	2313, 2406
BtgZI	GCGATG	1 cut(s)	177
BtrI	CACGTC	1 cut(s)	641
BtsCI	GGATG	3 cut(s)	436, 2117, 2398
BtsI	GCAGTG	2 cut(s)	1036, 1829
BtsIMutI	CAGTG	6 cut(s)	16, 762, 1036, 1396, 1829, 2240
BveI	ACCTGC	2 cut(s)	1001, 2443
Cac8I	GCNNGC	8 cut(s)	76, 1581, 1909, 2094, 2217, 2241, 2290, 2373
CaiI	CAGNNNCTG	2 cut(s)	764, 1831
CciI	TCATGA	1 cut(s)	631
CfoI	GCGC	1 cut(s)	2323
Cfr10I	RCCGGY	2 cut(s)	238, 2422
Cfr13I	GGNCC	4 cut(s)	871, 1212, 1260, 1996
Cfr42I	CCGCGG	2 cut(s)	2316, 2409
ClaI	ATCGAT	2 cut(s)	654, 1845
CsiI	ACCWGGT	3 cut(s)	1507, 1552, 1716
Csp6I	GTAC	7 cut(s)	838, 853, 1535, 1630, 1690, 1699, 2263
CviQI	GTAC	7 cut(s)	838, 853, 1535, 1630, 1690, 1699, 2263
DdeI	CTNAG	9 cut(s)	114, 973, 1179, 1695, 1888, 1992, 2007, 2367, 2448
DinI	GGCGCC	1 cut(s)	2322
DpnI	GATC	8 cut(s)	186, 414, 630, 756, 887, 927, 1184, 1848
DpnII	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
EaeI	YGGCCR	4 cut(s)	965, 2168, 2201, 2237
Eam1104I	CTCTTC	6 cut(s)	516, 1044, 1140, 1442, 1920, 2018
EarI	CTCTTC	6 cut(s)	516, 1044, 1140, 1442, 1920, 2018
Eco130I	CCWWGG	1 cut(s)	489
Eco24I	GRGCYC	1 cut(s)	1884
Eco31I	GGTCTC	1 cut(s)	224
Eco32I	GATATC	1 cut(s)	712
Eco47I	GGWCC	2 cut(s)	1260, 1996
Eco57I	CTGAAG	1 cut(s)	375
Eco72I	CACGTG	1 cut(s)	1225
Eco81I	CCTNAGG	1 cut(s)	2448
Eco88I	CYCGRG	1 cut(s)	1766
EcoO109I	RGGNCCY	1 cut(s)	1212
EcoRII	CCWGG	6 cut(s)	142, 503, 1434, 1507, 1552, 1716
EcoRV	GATATC	1 cut(s)	712
EcoT14I	CCWWGG	1 cut(s)	489
EcoT22I	ATGCAT	4 cut(s)	175, 580, 1382, 2272
EcoT38I	GRGCYC	1 cut(s)	1884
EgeI	GGCGCC	1 cut(s)	2322
EheI	GGCGCC	1 cut(s)	2322
ErhI	CCWWGG	1 cut(s)	489
FalI	AAGNNNNNCTT	2 cut(s)	2000, 2032
FaqI	GGGAC	2 cut(s)	2241, 2363
FauI	CCCGC	2 cut(s)	2320, 2388
FauNDI	CATATG	2 cut(s)	226, 748
FblI	GTMKAC	1 cut(s)	50
FokI	GGATG	3 cut(s)	443, 2104, 2385
FriOI	GRGCYC	1 cut(s)	1884
FspBI	CTAG	9 cut(s)	153, 261, 276, 315, 644, 1271, 1743, 1908, 2093
GlaI	GCGC	1 cut(s)	2322
GsaI	CCCAGC	1 cut(s)	1887
GsuI	CTGGAG	1 cut(s)	372
HaeII	RGCGCY	1 cut(s)	2324
HapII	CCGG	3 cut(s)	239, 1457, 2423
HhaI	GCGC	1 cut(s)	2323
Hin1I	GRCGYC	1 cut(s)	2321
Hin6I	GCGC	1 cut(s)	2321
HinP1I	GCGC	1 cut(s)	2321
HindIII	AAGCTT	2 cut(s)	2100, 2196
HpaII	CCGG	3 cut(s)	239, 1457, 2423
HphI	GGTGA	3 cut(s)	1126, 1457, 1542
Hpy166II	GTNNAC	4 cut(s)	51, 1016, 1402, 1710
Hpy8I	GTNNAC	4 cut(s)	51, 1016, 1402, 1710
HpyAV	CCTTC	4 cut(s)	765, 1283, 1981, 2361
HpyCH4III	ACNGT	9 cut(s)	11, 19, 364, 465, 766, 941, 1598, 2183, 2235
HpyCH4IV	ACGT	4 cut(s)	640, 1224, 1676, 2053
HpyF3I	CTNAG	9 cut(s)	114, 973, 1179, 1695, 1888, 1992, 2007, 2367, 2448
HpySE526I	ACGT	4 cut(s)	640, 1224, 1676, 2053
Hsp92I	GRCGYC	1 cut(s)	2321
HspAI	GCGC	1 cut(s)	2321
KasI	GGCGCC	1 cut(s)	2320
KspI	CCGCGG	2 cut(s)	2316, 2409
Kzo9I	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
LguI	GCTCTTC	2 cut(s)	1920, 2018
LmnI	GCTCC	5 cut(s)	94, 2028, 2141, 2285, 2431
LweI	GCATC	7 cut(s)	61, 247, 376, 421, 565, 1947, 1960
MabI	ACCWGGT	3 cut(s)	1507, 1552, 1716
MaeI	CTAG	9 cut(s)	153, 261, 276, 315, 644, 1271, 1743, 1908, 2093
MaeII	ACGT	4 cut(s)	640, 1224, 1676, 2053
MaeIII	GTNAC	9 cut(s)	215, 250, 694, 1031, 1677, 1912, 2177, 2390, 2465
MalI	GATC	8 cut(s)	186, 414, 630, 756, 887, 927, 1184, 1848
MboI	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
MfeI	CAATTG	2 cut(s)	920, 1778
MflI	RGATCY	2 cut(s)	184, 754
MhlI	GDGCHC	4 cut(s)	1018, 1516, 1765, 1884
MlsI	TGGCCA	3 cut(s)	2170, 2203, 2239
MluNI	TGGCCA	3 cut(s)	2170, 2203, 2239
Mly113I	GGCGCC	1 cut(s)	2321
MlyI	GAGTC	3 cut(s)	308, 1808, 1985
MmeI	TCCRAC	3 cut(s)	226, 781, 1101
Mox20I	TGGCCA	3 cut(s)	2170, 2203, 2239
Mph1103I	ATGCAT	4 cut(s)	175, 580, 1382, 2272
MroXI	GAANNNNTTC	2 cut(s)	364, 1053
MscI	TGGCCA	3 cut(s)	2170, 2203, 2239
MseI	TTAA	4 cut(s)	515, 945, 1103, 1956
Msp20I	TGGCCA	3 cut(s)	2170, 2203, 2239
MspA1I	CMGCKG	4 cut(s)	1004, 2243, 2315, 2408
MspI	CCGG	3 cut(s)	239, 1457, 2423
MspR9I	CCNGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
MunI	CAATTG	2 cut(s)	920, 1778
Mva1269I	GAATGC	2 cut(s)	109, 1666
MvaI	CCWGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
MvnI	CGCG	2 cut(s)	2315, 2408
NarI	GGCGCC	1 cut(s)	2321
NdeI	CATATG	2 cut(s)	226, 748
NdeII	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
NheI	GCTAGC	2 cut(s)	1907, 2092
NlaIV	GGNNCC	4 cut(s)	872, 1328, 2322, 2427
NmuCI	GTSAC	2 cut(s)	250, 1031
NsiI	ATGCAT	4 cut(s)	175, 580, 1382, 2272
NspI	RCATGY	3 cut(s)	859, 1583, 2006
NspV	TTCGAA	1 cut(s)	1727
PaeI	GCATGC	1 cut(s)	1583
PaeR7I	CTCGAG	1 cut(s)	1766
PagI	TCATGA	1 cut(s)	631
PaqCI	CACCTGC	1 cut(s)	1001
PciSI	GCTCTTC	2 cut(s)	1920, 2018
PctI	GAATGC	2 cut(s)	109, 1666
PdmI	GAANNNNTTC	2 cut(s)	364, 1053
PfeI	GAWTC	8 cut(s)	206, 323, 1175, 1363, 1462, 1482, 1842, 1856
PflFI	GACNNNGTC	1 cut(s)	764
PfoI	TCCNGGA	1 cut(s)	503
PleI	GAGTC	3 cut(s)	307, 1807, 1984
PluTI	GGCGCC	1 cut(s)	2324
PmaCI	CACGTG	1 cut(s)	1225
PmlI	CACGTG	1 cut(s)	1225
PpsI	GAGTC	3 cut(s)	307, 1807, 1984
Ppu21I	YACGTR	1 cut(s)	1225
Psp6I	CCWGG	6 cut(s)	142, 503, 1434, 1507, 1552, 1716
PspCI	CACGTG	1 cut(s)	1225
PspFI	CCCAGC	1 cut(s)	1883
PspGI	CCWGG	6 cut(s)	142, 503, 1434, 1507, 1552, 1716
PspN4I	GGNNCC	4 cut(s)	872, 1328, 2322, 2427
PspPI	GGNCC	4 cut(s)	871, 1212, 1260, 1996
PspXI	VCTCGAGB	1 cut(s)	1766
PsrI	GAACNNNNNNTAC	2 cut(s)	1691, 1723
PstI	CTGCAG	2 cut(s)	1003, 1009
PstNI	CAGNNNCTG	2 cut(s)	764, 1831
PsuI	RGATCY	2 cut(s)	184, 754
PsyI	GACNNNGTC	1 cut(s)	764
PvuII	CAGCTG	2 cut(s)	1004, 2243
RsaI	GTAC	7 cut(s)	839, 854, 1536, 1631, 1691, 1700, 2264
RsaNI	GTAC	7 cut(s)	838, 853, 1535, 1630, 1690, 1699, 2263
SacII	CCGCGG	2 cut(s)	2316, 2409
SapI	GCTCTTC	2 cut(s)	1920, 2018
SaqAI	TTAA	4 cut(s)	515, 945, 1103, 1956
Sau3AI	GATC	8 cut(s)	184, 412, 628, 754, 885, 925, 1182, 1846
Sau96I	GGNCC	4 cut(s)	871, 1212, 1260, 1996
ScaI	AGTACT	1 cut(s)	1700
SchI	GAGTC	3 cut(s)	308, 1808, 1985
ScrFI	CCNGG	6 cut(s)	144, 505, 1436, 1509, 1554, 1718
SduI	GDGCHC	4 cut(s)	1018, 1516, 1765, 1884
SexAI	ACCWGGT	3 cut(s)	1507, 1552, 1716
SfaNI	GCATC	7 cut(s)	61, 247, 376, 421, 565, 1947, 1960
SfcI	CTRYAG	3 cut(s)	999, 1005, 1242
SfoI	GGCGCC	1 cut(s)	2322
Sfr274I	CTCGAG	1 cut(s)	1766
Sfr303I	CCGCGG	2 cut(s)	2316, 2409
SfuI	TTCGAA	1 cut(s)	1727
SgrBI	CCGCGG	2 cut(s)	2316, 2409
SinI	GGWCC	2 cut(s)	1260, 1996
SlaI	CTCGAG	1 cut(s)	1766
SmlI	CTYRAG	5 cut(s)	306, 1515, 1766, 1796, 2193
SmoI	CTYRAG	5 cut(s)	306, 1515, 1766, 1796, 2193
SphI	GCATGC	1 cut(s)	1583
SspDI	GGCGCC	1 cut(s)	2320
SspI	AATATT	3 cut(s)	85, 472, 900
SspMI	CTAG	9 cut(s)	153, 261, 276, 315, 644, 1271, 1743, 1908, 2093
StyD4I	CCNGG	6 cut(s)	142, 503, 1434, 1507, 1552, 1716
StyI	CCWWGG	1 cut(s)	489
TaaI	ACNGT	9 cut(s)	11, 19, 364, 465, 766, 941, 1598, 2183, 2235
TaiI	ACGT	4 cut(s)	643, 1227, 1679, 2056
TaqI	TCGA	8 cut(s)	654, 1173, 1366, 1480, 1727, 1767, 1815, 1845
TaqII	GACCGA	2 cut(s)	2013, 2122
TatI	WGTACW	4 cut(s)	837, 852, 1534, 1698
TauI	GCSGC	5 cut(s)	876, 1231, 1619, 2408, 2411
TfiI	GAWTC	8 cut(s)	206, 323, 1175, 1363, 1462, 1482, 1842, 1856
Tru1I	TTAA	4 cut(s)	515, 945, 1103, 1956
Tru9I	TTAA	4 cut(s)	515, 945, 1103, 1956
TscAI	CASTG	6 cut(s)	16, 769, 1036, 1396, 1836, 2240
TseFI	GTSAC	2 cut(s)	250, 1031
Tsp45I	GTSAC	2 cut(s)	250, 1031
TspDTI	ATGAA	8 cut(s)	297, 303, 347, 357, 690, 1335, 1746, 1864
TspGWI	ACGGA	1 cut(s)	585
TspRI	CASTG	6 cut(s)	16, 769, 1036, 1396, 1836, 2240
Tth111I	GACNNNGTC	1 cut(s)	764
VneI	GTGCAC	1 cut(s)	1014
VpaK11BI	GGWCC	2 cut(s)	1260, 1996
XapI	RAATTY	2 cut(s)	558, 1749
XceI	RCATGY	3 cut(s)	859, 1583, 2006
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1396, 2171
XhoI	CTCGAG	1 cut(s)	1766
XmiI	GTMKAC	1 cut(s)	50
XmnI	GAANNNNTTC	2 cut(s)	364, 1053
XspI	CTAG	9 cut(s)	153, 261, 276, 315, 644, 1271, 1743, 1908, 2093
ZrmI	AGTACT	1 cut(s)	1700
Zsp2I	ATGCAT	4 cut(s)	175, 580, 1382, 2272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.