Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002317

Physical Location & Seq

Genomic Coordinates Reverse (-)

52766442 .. 52770705

Gene Structure 4264 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG298100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGCAGCGTTTAGAAGTGTCATATGGTGTTAAGAGTCAGTTCTGCGGTCTCTCCCTTTCATGGATGTGTTATCTCAGCTGTATTAATACTTGTACCCATCTGATCTTTTTTTTTTTTTTTTCCTTCCAATTTTTCTCTTTTATGGCTTTCAGGCTTTTTGAGCGAGGATTAGCGTATGTTGGAACAGATTACTTGTCCTTTCCTCTTTGGGACAGGTACATTGATTATGAATTTATGCAGCAAGCATGGGGCCAGCTTGTTGTGATCTACTCACGAATATTAGAGAATCCGAACCAACAACTGGATCGATATTTAAACAGTTTTAAGGAGTTAGCTGGAAGTCGGCCTCTCTCAGAATTGAGAACTGCTGAAGAAGCTGCTGCAGCAGCAAGTGCCACTTCAGAGGATGGTGTACAAGCAAATGGGGAAGATGCTCAACCTGATGGTGCAGAACCATCTCCTGCTATCTTAACAGAAGCGGAGGAGTTGGAGAAGTTTATCGCCATTCGAGAAGAGATGTATAAAAAAGCTAAAGAGTTCGATTCTAAGATAATTAATTTTGAAACAGCTATTAGGAGGCCTTACTTTCACGTGAGGCCCCTTAACGCTGCAGAGCTTGAAAATTGGAACAACTATCTTGACTTTATTGAAAGGGAAGGTGACTTTAACAAGGTGGTCAAGTTATATGAAAGATGCCTGATTGCTTGCGCTAATTATCCTGAATACTGGATTCGTTATGTCCTAAGTATGGAAGCTAGTGGAAGTTTGGATCTTGCCAATAATGCTCTTGATCGTGCTACCCAGGTCTTTGTGAAGAGACAACCAGAGATTCACCTTTTTGCTGCTCGCTTCAAAGAGCAAAGTGGAGATATCCCTGGTGCTCAGGCTGCTTATCAACTCGTACATTCTGAAATTTCACCTGGTCTTCTTGAAGCAATCATTAAGCATGCAAACATGGAACACCGTCTGGGAAATATGGAAGCTGCCTACTCCTTGTTTGAACAGGCCATTGCCATTGAAAAAGGAAAGGAGCATTCTCAGACCTTACCCGTGCTGTTTGCTCAATACGCACGGTTCGCATACTTGGTATCTTTGAATGCTGAAAAAGCCAGGGCTATCTTTGTTGAAGCGGTCGAGCATGTTCAATTGTCAAAAGCATTCCTCGAGGCCCTGATACATTTCGAGTCGATACATTCGTTGCCAAAGCAAATTGATTACATAGATTCCTTGGTTGTGAAGTTCGTAGAGTCCAACTCAGAGAACCCCAATTTTGCGAGTGTTGCTGACAGAGAGGAGTTATCTTGCATCTATTTGGAGTTTCTAAATCTCTTTGGGGATGCACAGTCTATCAAGAAGGCTGAGGATCGGCATGCTAAGCTCTTTTTACTTCATAGGAGCACCACTTCAGAGTTGAAAAAACGGCAAGCTGAAGATTACCTATCTTCTGATAAAGCAAAGATGGCAAAATCCTACTCTGGTGTTCCTTCACCTGCCCAGTCTATTATGGGAGCATATCCAAATGCACAAAACCAGTGGGCTGCTGGCTATGGTGTGCAACCTCAAGCTTGGCCACCAGCTACACAAGCACAGGGACAACAATGGACCCCTGGTTATACCCAACAGGCATACAATGCATATGGTGGTTATCAGCAAGTACCTGCTGCAGTGCCACAGACTGCTGCTTATCCTGCTACATATCCCGCCACATATCCTGCTCAGCCGGCAGCTTTCCCCCCACAAAGCTATGCACAGCCAGCTACTGCAGTAGCAGCTGTAGCACCAGCTCAGCAACCTGCTCCGGCTCAACAGGCGTATTATGGGAATTACTACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

611

Amino Acids

68.9

Weight (kDa)

5.3

Isoelectric Point (pI)

44.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_PRP39_N	PF23240	51 - 110	9.3e-15	PRP39 N-terminal HAT repeat
Suf	PF05843	164 - 384	1.7e-08	Suppressor of forked protein (Suf)
HAT_PRP39_C	PF23241	183 - 322	2.7e-48	PRP39 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04080 AT1G04080 AT1G04080 AT1G04080 AT1G04080
fragaria_vesca	FvH4_2g20550
malus_domestica	MD00G1060100.v1.1
prunus_persica	Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1
pyrus_communis	pycom05g17390 pycom10g15270
rosa_chinensis	RchiOBHm_Chr1g0327141 RchiOBHm_Chr6g0282561 RchiOBHm_Chr6g0286711
rosa_laevigata	RLG00000007391 RLG00000012550 RLG00000030995
rosa_multiflora	Rmu_co8283097.1_g000001 Rmu_co8332197.1_g000001 Rmu_sc0001468.1_g000022
rosa_roxburghii	Rroxscaffold_1G00034270 Rroxscaffold_1G00060390 Rroxscaffold_7G00182090
rosa_rugosa	Rorug05G0468800 Rorug06G0182100 Rorug06G0182200
rosa_samantha	Rh2CG306300 Rh5BG355000 Rh5BG355100 Rh5BG357900 Rh6AG023000 Rh6AG294900 Rh6BG204700 Rh6BG298100 Rh6BG298200 Rh6CG298600 Rh6DG290600
rosa_wichuraiana	Rw1G013170 Rw5G035150 Rw6G025370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1498
AbsI	CCTCGAGG	1 cut(s)	1163
Acc36I	ACCTGC	3 cut(s)	1498, 1666, 1801
AccB7I	CCANNNNNTGG	1 cut(s)	301
AciI	CCGC	4 cut(s)	45, 479, 1130, 1701
AclWI	GGATC	3 cut(s)	312, 777, 1371
AcoI	YGGCCR	1 cut(s)	1568
AcsI	RAATTY	2 cut(s)	230, 912
AcuI	CTGAAG	4 cut(s)	384, 390, 1389, 1449
AcvI	CACGTG	1 cut(s)	592
AfaI	GTAC	5 cut(s)	94, 218, 414, 903, 1656
AfiI	CCNNNNNNNGG	3 cut(s)	60, 301, 748
AjnI	CCWGG	5 cut(s)	801, 874, 919, 1109, 1606
Alw21I	GWGCWC	2 cut(s)	883, 1400
Alw26I	GTCTC	2 cut(s)	53, 811
AlwI	GGATC	3 cut(s)	312, 777, 1371
AlwNI	CAGNNNCTG	1 cut(s)	1760
Ama87I	CYCGRG	1 cut(s)	1163
AoxI	GGCC	7 cut(s)	250, 344, 578, 596, 1005, 1167, 1568
ApoI	RAATTY	2 cut(s)	230, 912
AseI	ATTAAT	2 cut(s)	84, 555
AspLEI	GCGC	1 cut(s)	710
AspS9I	GGNCC	4 cut(s)	250, 597, 1168, 1602
AsuHPI	GGTGA	4 cut(s)	671, 824, 909, 1479
AvaI	CYCGRG	1 cut(s)	1163
AvaII	GGWCC	1 cut(s)	1602
BaeI	ACNNNNGTAYC	2 cut(s)	1181, 1214
BalI	TGGCCA	1 cut(s)	1570
BbrPI	CACGTG	1 cut(s)	592
BbsI	GAAGAC	1 cut(s)	917
Bbv12I	GWGCWC	2 cut(s)	883, 1400
BbvCI	CCTCAGC	1 cut(s)	1359
BccI	CCATC	5 cut(s)	105, 401, 437, 463, 1453
BceAI	ACGGC	1 cut(s)	1436
BciT130I	CCWGG	5 cut(s)	803, 876, 921, 1111, 1608
BcoDI	GTCTC	2 cut(s)	53, 811
BfaI	CTAG	1 cut(s)	756
BfmI	CTRYAG	5 cut(s)	381, 609, 1662, 1761, 1773
BfuAI	ACCTGC	3 cut(s)	1498, 1666, 1801
BlpI	GCTNAGC	3 cut(s)	1374, 1716, 1785
Bme1390I	CCNGG	5 cut(s)	803, 876, 921, 1111, 1608
Bme18I	GGWCC	1 cut(s)	1602
BmeT110I	CYCGRG	1 cut(s)	1163
BmgT120I	GGNCC	4 cut(s)	250, 597, 1168, 1602
BmiI	GGNNCC	3 cut(s)	251, 599, 1604
BmrFI	CCNGG	5 cut(s)	803, 876, 921, 1111, 1608
BmrI	ACTGGG	1 cut(s)	1489
BmsI	GCATC	4 cut(s)	421, 683, 1314, 1327
BmuI	ACTGGG	1 cut(s)	1489
BpiI	GAAGAC	1 cut(s)	917
BplI	GAGNNNNNCTC	2 cut(s)	1238, 1270
Bpu10I	CCTNAGC	2 cut(s)	882, 1359
Bpu1102I	GCTNAGC	3 cut(s)	1374, 1716, 1785
BpuEI	CTTGAG	1 cut(s)	1545
Bsa29I	ATCGAT	1 cut(s)	307
BsaAI	YACGTR	1 cut(s)	592
BsaI	GGTCTC	1 cut(s)	53
BsaJI	CCNNGG	5 cut(s)	801, 874, 1110, 1227, 1606
Bsc4I	CCNNNNNNNGG	3 cut(s)	60, 301, 748
Bse118I	RCCGGY	1 cut(s)	1720
Bse1I	ACTGG	5 cut(s)	306, 731, 1495, 1531, 1831
Bse3DI	GCAATG	1 cut(s)	1008
BseBI	CCWGG	5 cut(s)	803, 876, 921, 1111, 1608
BseCI	ATCGAT	1 cut(s)	307
BseDI	CCNNGG	5 cut(s)	801, 874, 1110, 1227, 1606
BseGI	GGATG	3 cut(s)	69, 412, 1342
BseLI	CCNNNNNNNGG	3 cut(s)	60, 301, 748
BseMI	GCAATG	1 cut(s)	1008
BseMII	CTCAG	8 cut(s)	88, 366, 896, 1052, 1269, 1350, 1730, 1799
BseNI	ACTGG	5 cut(s)	306, 731, 1495, 1531, 1831
BseRI	GAGGAG	2 cut(s)	497, 1307
BsgI	GTGCAG	1 cut(s)	468
Bsh1285I	CGRYCG	1 cut(s)	1134
BshFI	GGCC	7 cut(s)	252, 346, 580, 598, 1007, 1169, 1570
BshVI	ATCGAT	1 cut(s)	307
BsiEI	CGRYCG	1 cut(s)	1134
BsiHKAI	GWGCWC	2 cut(s)	883, 1400
BsiHKCI	CYCGRG	1 cut(s)	1163
BsiSI	CCGG	2 cut(s)	1721, 1799
BslFI	GGGAC	2 cut(s)	224, 1605
BslI	CCNNNNNNNGG	3 cut(s)	60, 301, 748
BsmAI	GTCTC	2 cut(s)	53, 811
BsmFI	GGGAC	2 cut(s)	224, 1605
BsmI	GAATGC	3 cut(s)	1033, 1102, 1157
BsnI	GGCC	7 cut(s)	252, 346, 580, 598, 1007, 1169, 1570
Bso31I	GGTCTC	1 cut(s)	53
BsoBI	CYCGRG	1 cut(s)	1163
Bsp1286I	GDGCHC	2 cut(s)	883, 1400
Bsp1407I	TGTACA	1 cut(s)	412
Bsp143I	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
Bsp1720I	GCTNAGC	3 cut(s)	1374, 1716, 1785
BspACI	CCGC	4 cut(s)	45, 479, 1130, 1701
BspANI	GGCC	7 cut(s)	252, 346, 580, 598, 1007, 1169, 1570
BspCNI	CTCAG	8 cut(s)	87, 365, 895, 1051, 1268, 1351, 1729, 1798
BspDI	ATCGAT	1 cut(s)	307
BspLI	GGNNCC	3 cut(s)	251, 599, 1604
BspMAI	CTGCAG	4 cut(s)	385, 613, 1666, 1765
BspMI	ACCTGC	3 cut(s)	1498, 1666, 1801
BspPI	GGATC	3 cut(s)	312, 777, 1371
BspTNI	GGTCTC	1 cut(s)	53
BsrDI	GCAATG	1 cut(s)	1008
BsrFI	RCCGGY	1 cut(s)	1720
BsrGI	TGTACA	1 cut(s)	412
BsrI	ACTGG	5 cut(s)	306, 731, 1495, 1531, 1831
BssAI	RCCGGY	1 cut(s)	1720
BssECI	CCNNGG	5 cut(s)	801, 874, 1110, 1227, 1606
BssMI	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
BssT1I	CCWWGG	1 cut(s)	1227
Bst2UI	CCWGG	5 cut(s)	803, 876, 921, 1111, 1608
Bst4CI	ACNGT	4 cut(s)	320, 965, 1074, 1344
Bst6I	CTCTTC	2 cut(s)	507, 809
BstAPI	GCANNNNNTGC	2 cut(s)	392, 1631
BstAUI	TGTACA	1 cut(s)	412
BstBAI	YACGTR	1 cut(s)	592
BstF5I	GGATG	3 cut(s)	69, 412, 1342
BstHHI	GCGC	1 cut(s)	710
BstKTI	GATC	6 cut(s)	105, 267, 307, 772, 793, 1366
BstMAI	GTCTC	2 cut(s)	53, 811
BstMBI	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
BstMCI	CGRYCG	1 cut(s)	1134
BstNI	CCWGG	5 cut(s)	803, 876, 921, 1111, 1608
BstNSI	RCATGY	3 cut(s)	950, 1142, 1373
BstSCI	CCNGG	5 cut(s)	801, 874, 919, 1109, 1606
BstSFI	CTRYAG	5 cut(s)	381, 609, 1662, 1761, 1773
BstV2I	GAAGAC	1 cut(s)	917
BstX2I	RGATCY	1 cut(s)	769
BstYI	RGATCY	1 cut(s)	769
Bsu15I	ATCGAT	1 cut(s)	307
BsuRI	GGCC	7 cut(s)	252, 346, 580, 598, 1007, 1169, 1570
BsuTUI	ATCGAT	1 cut(s)	307
BtsCI	GGATG	3 cut(s)	69, 412, 1342
BtsI	GCAGTG	1 cut(s)	1671
BtsIMutI	CAGTG	2 cut(s)	1538, 1671
BveI	ACCTGC	3 cut(s)	1498, 1666, 1801
CaiI	CAGNNNCTG	1 cut(s)	1760
CfoI	GCGC	1 cut(s)	710
Cfr10I	RCCGGY	1 cut(s)	1720
Cfr13I	GGNCC	4 cut(s)	250, 597, 1168, 1602
ClaI	ATCGAT	1 cut(s)	307
CsiI	ACCWGGT	1 cut(s)	919
Csp6I	GTAC	5 cut(s)	93, 217, 413, 902, 1655
CspCI	CAANNNNNGTGG	2 cut(s)	1514, 1549
CviAII	CATG	6 cut(s)	60, 246, 947, 955, 1139, 1370
CviQI	GTAC	5 cut(s)	93, 217, 413, 902, 1655
DpnI	GATC	6 cut(s)	104, 266, 306, 771, 792, 1365
DpnII	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
DraI	TTTAAA	1 cut(s)	315
EaeI	YGGCCR	1 cut(s)	1568
Eam1104I	CTCTTC	2 cut(s)	507, 809
EarI	CTCTTC	2 cut(s)	507, 809
Eco130I	CCWWGG	1 cut(s)	1227
Eco147I	AGGCCT	1 cut(s)	580
Eco31I	GGTCTC	1 cut(s)	53
Eco32I	GATATC	1 cut(s)	871
Eco47I	GGWCC	1 cut(s)	1602
Eco57I	CTGAAG	4 cut(s)	384, 390, 1389, 1449
Eco72I	CACGTG	1 cut(s)	592
Eco88I	CYCGRG	1 cut(s)	1163
EcoO109I	RGGNCCY	2 cut(s)	597, 1168
EcoRII	CCWGG	5 cut(s)	801, 874, 919, 1109, 1606
EcoRV	GATATC	1 cut(s)	871
EcoT14I	CCWWGG	1 cut(s)	1227
EcoT22I	ATGCAT	1 cut(s)	1636
ErhI	CCWWGG	1 cut(s)	1227
FaeI	CATG	6 cut(s)	63, 249, 950, 958, 1142, 1373
FalI	AAGNNNNNCTT	2 cut(s)	382, 414
FaqI	GGGAC	2 cut(s)	224, 1605
FatI	CATG	6 cut(s)	59, 245, 946, 954, 1138, 1369
FauI	CCCGC	1 cut(s)	1708
FauNDI	CATATG	2 cut(s)	22, 1636
FokI	GGATG	3 cut(s)	76, 419, 1349
FspBI	CTAG	1 cut(s)	756
GlaI	GCGC	1 cut(s)	709
HaeIII	GGCC	7 cut(s)	252, 346, 580, 598, 1007, 1169, 1570
HapII	CCGG	2 cut(s)	1721, 1799
HhaI	GCGC	1 cut(s)	710
Hin1II	CATG	6 cut(s)	63, 249, 950, 958, 1142, 1373
Hin6I	GCGC	1 cut(s)	708
HinP1I	GCGC	1 cut(s)	708
HindIII	AAGCTT	1 cut(s)	1563
HinfI	GANTC	8 cut(s)	34, 286, 542, 730, 829, 1184, 1223, 1247
HpaII	CCGG	2 cut(s)	1721, 1799
HphI	GGTGA	4 cut(s)	671, 824, 909, 1479
Hpy166II	GTNNAC	1 cut(s)	413
Hpy188I	TCNGA	9 cut(s)	102, 291, 355, 403, 910, 1041, 1258, 1408, 1447
Hpy188III	TCNNGA	7 cut(s)	273, 509, 638, 719, 788, 929, 1351
Hpy8I	GTNNAC	1 cut(s)	413
HpyAV	CCTTC	4 cut(s)	133, 650, 1348, 1494
HpyCH4III	ACNGT	4 cut(s)	320, 965, 1074, 1344
HpyCH4IV	ACGT	1 cut(s)	591
HpySE526I	ACGT	1 cut(s)	591
Hsp92II	CATG	6 cut(s)	63, 249, 950, 958, 1142, 1373
HspAI	GCGC	1 cut(s)	708
KroI	GCCGGC	1 cut(s)	1720
KroNI	GCCGGC	1 cut(s)	1722
Kzo9I	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
LmnI	GCTCC	4 cut(s)	1030, 1395, 1508, 1801
LweI	GCATC	4 cut(s)	421, 683, 1314, 1327
MabI	ACCWGGT	1 cut(s)	919
MaeI	CTAG	1 cut(s)	756
MaeII	ACGT	1 cut(s)	591
MaeIII	GTNAC	1 cut(s)	659
MalI	GATC	6 cut(s)	104, 266, 306, 771, 792, 1365
MboI	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
MboII	GAAGA	7 cut(s)	383, 440, 524, 826, 917, 1434, 1442
MfeI	CAATTG	1 cut(s)	1145
MflI	RGATCY	1 cut(s)	769
MhlI	GDGCHC	2 cut(s)	883, 1400
MlsI	TGGCCA	1 cut(s)	1570
MluNI	TGGCCA	1 cut(s)	1570
MlyI	GAGTC	3 cut(s)	43, 1193, 1256
MmeI	TCCRAC	3 cut(s)	160, 468, 1275
Mox20I	TGGCCA	1 cut(s)	1570
Mph1103I	ATGCAT	1 cut(s)	1636
MroNI	GCCGGC	1 cut(s)	1720
MscI	TGGCCA	1 cut(s)	1570
MseI	TTAA	9 cut(s)	30, 84, 314, 324, 470, 555, 603, 666, 942
MslI	CAYNNNNRTG	1 cut(s)	64
Msp20I	TGGCCA	1 cut(s)	1570
MspA1I	CMGCKG	2 cut(s)	78, 1772
MspI	CCGG	2 cut(s)	1721, 1799
MspR9I	CCNGG	5 cut(s)	803, 876, 921, 1111, 1608
MunI	CAATTG	1 cut(s)	1145
Mva1269I	GAATGC	3 cut(s)	1033, 1102, 1157
MvaI	CCWGG	5 cut(s)	803, 876, 921, 1111, 1608
NaeI	GCCGGC	1 cut(s)	1722
NdeI	CATATG	2 cut(s)	22, 1636
NdeII	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
NgoMIV	GCCGGC	1 cut(s)	1720
NlaIII	CATG	6 cut(s)	63, 249, 950, 958, 1142, 1373
NlaIV	GGNNCC	3 cut(s)	251, 599, 1604
NmuCI	GTSAC	1 cut(s)	659
NsiI	ATGCAT	1 cut(s)	1636
NspI	RCATGY	3 cut(s)	950, 1142, 1373
PaeI	GCATGC	2 cut(s)	950, 1373
PaeR7I	CTCGAG	1 cut(s)	1163
PaqCI	CACCTGC	1 cut(s)	1498
PceI	AGGCCT	1 cut(s)	580
PcsI	WCGNNNNNNNCGW	1 cut(s)	1193
PctI	GAATGC	3 cut(s)	1033, 1102, 1157
PdiI	GCCGGC	1 cut(s)	1722
PfeI	GAWTC	5 cut(s)	286, 542, 730, 829, 1223
PflMI	CCANNNNNTGG	1 cut(s)	301
PleI	GAGTC	3 cut(s)	42, 1192, 1255
PmaCI	CACGTG	1 cut(s)	592
PmlI	CACGTG	1 cut(s)	592
PpsI	GAGTC	3 cut(s)	42, 1192, 1255
Ppu21I	YACGTR	1 cut(s)	592
PshBI	ATTAAT	2 cut(s)	84, 555
Psp6I	CCWGG	5 cut(s)	801, 874, 919, 1109, 1606
PspCI	CACGTG	1 cut(s)	592
PspGI	CCWGG	5 cut(s)	801, 874, 919, 1109, 1606
PspN4I	GGNNCC	3 cut(s)	251, 599, 1604
PspPI	GGNCC	4 cut(s)	250, 597, 1168, 1602
PspXI	VCTCGAGB	1 cut(s)	1163
PstI	CTGCAG	4 cut(s)	385, 613, 1666, 1765
PstNI	CAGNNNCTG	1 cut(s)	1760
PsuI	RGATCY	1 cut(s)	769
PvuII	CAGCTG	2 cut(s)	78, 1772
RsaI	GTAC	5 cut(s)	94, 218, 414, 903, 1656
RsaNI	GTAC	5 cut(s)	93, 217, 413, 902, 1655
RseI	CAYNNNNRTG	1 cut(s)	64
SaqAI	TTAA	9 cut(s)	30, 84, 314, 324, 470, 555, 603, 666, 942
Sau3AI	GATC	6 cut(s)	102, 264, 304, 769, 790, 1363
Sau96I	GGNCC	4 cut(s)	250, 597, 1168, 1602
SchI	GAGTC	3 cut(s)	43, 1193, 1256
ScrFI	CCNGG	5 cut(s)	803, 876, 921, 1111, 1608
SduI	GDGCHC	2 cut(s)	883, 1400
SexAI	ACCWGGT	1 cut(s)	919
SfaNI	GCATC	4 cut(s)	421, 683, 1314, 1327
SfcI	CTRYAG	5 cut(s)	381, 609, 1662, 1761, 1773
Sfr274I	CTCGAG	1 cut(s)	1163
SinI	GGWCC	1 cut(s)	1602
SlaI	CTCGAG	1 cut(s)	1163
SmiMI	CAYNNNNRTG	1 cut(s)	64
SmlI	CTYRAG	2 cut(s)	1163, 1560
SmoI	CTYRAG	2 cut(s)	1163, 1560
SphI	GCATGC	2 cut(s)	950, 1373
SseBI	AGGCCT	1 cut(s)	580
SsiI	CCGC	4 cut(s)	45, 479, 1130, 1701
SspI	AATATT	1 cut(s)	279
SspMI	CTAG	1 cut(s)	756
StuI	AGGCCT	1 cut(s)	580
StyD4I	CCNGG	5 cut(s)	801, 874, 919, 1109, 1606
StyI	CCWWGG	1 cut(s)	1227
TaaI	ACNGT	4 cut(s)	320, 965, 1074, 1344
TaiI	ACGT	1 cut(s)	594
TaqI	TCGA	7 cut(s)	307, 508, 540, 1134, 1164, 1182, 1187
TatI	WGTACW	1 cut(s)	412
TfiI	GAWTC	5 cut(s)	286, 542, 730, 829, 1223
Tru1I	TTAA	9 cut(s)	30, 84, 314, 324, 470, 555, 603, 666, 942
Tru9I	TTAA	9 cut(s)	30, 84, 314, 324, 470, 555, 603, 666, 942
TscAI	CASTG	2 cut(s)	1538, 1671
TseFI	GTSAC	1 cut(s)	659
Tsp45I	GTSAC	1 cut(s)	659
TspDTI	ATGAA	4 cut(s)	48, 243, 702, 1379
TspRI	CASTG	2 cut(s)	1538, 1671
Van91I	CCANNNNNTGG	1 cut(s)	301
VpaK11BI	GGWCC	1 cut(s)	1602
VspI	ATTAAT	2 cut(s)	84, 555
XapI	RAATTY	2 cut(s)	230, 912
XceI	RCATGY	3 cut(s)	950, 1142, 1373
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1538
XhoI	CTCGAG	1 cut(s)	1163
XspI	CTAG	1 cut(s)	756
Zsp2I	ATGCAT	1 cut(s)	1636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.