Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002317

Physical Location & Seq

Genomic Coordinates Reverse (-)

28699717 .. 28710069

Gene Structure 10353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0182100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGCGCCATAGGATGGTGGATTGCTGGGGCGGACTCCGTGCAGGTTCAGGTTCAGGTTCAGCGAGCAGCTTCAGCCCCTACCTAGTTTTGCTGAACGATCTCCTCCTCATTCCCGTTTGGCACTACCTCGTGGCCTTGATCGCAATCTGCTTCGCATTCCTCTACCATTTCCTCGAATTCCATTTCCTCCATGACCTCTTCACCGGATTCAGAGGCTGCTCCGTCGCCTTGACCTACCACTCCTCCTCCCGTATCTACCACGACGTCGTTTCCAAGTGCCGGATTCTCCATTCCAGGTATTTGGTCACCCCCTGGCTCTCAAGTCCTCATTTGCAGACCGTCTTCCTCAGTCTCTTCGGCCGCCCTCCGGTTTTCAACTACCGCAGAGAACTTTTTCATCTCTCTGATGGTGGAACTATCGCCTTGGATTGGTTACTGGACTCTGATGTTCTGGGAAGTAACTATGACACAACCAGTGCTATTCCGAAAGATGATATAAAACCGATTGTGCTAGCCATTCCTGGATTGACAAGCGACTCCGAATCTCCTTATATAAAGCATCTTGCTTTTAACACGGCGCAAAAGGGATGGAACGTTGTTGTTACCAACCACAGAGGTTTGGGTGGTGTTTCAATTACTTCCGATTGCTTTTATAATGCTGGTTGGACAGAGGATCTGCGGGCAGTCATTAATCATCTCCATCATGAATACCCCAACGCTCCTTTATTTGTTGTTGGAACGAGTATCGGAGCCAACATTTTGGTAAAATATCTTGGGGAGGATGGAGATAGTGTTCCAGTTGCTGGAGCTGTAGCAATATGTTCTCCTTGGGACCTTCTGATTGGTGATAGATTTATAAGCCGTAGACTGTTGCAAAAAATTTATGACAGAGCTCTTGCAATTGGCCTTCAAGGCTATGCACAATTACACCAGCCTATTTATTCTCGCCTCGCTAATTGGGAAGGTATAAAAAAGTCGCGCTCTATTCGTGATTTTGATCATCATGCTACCCGCCTTGTTGGGAAATTTGAGACTGTGGACACATATTACAGGCGCTGTAGCAGTGCTAGTTATGTAGGAAATGTGTCAGTGCCACTACTTTGTATCAGTGCATTAGATGATCCACTTTGTACTAGGGAAGCCATTCCTTGGGATGAATGCAGGGCAAACTTAAATATTGTATTGGCTACCACAAAGCGCGGAGGACACTTGGCTTTCTTTGAAGGATTAACTGCAGCTGGCATCTGGTGGGTAAGGGCTGTGGATGAATTTTTAAAAGTTTTACATAGTAGCCAGTATATGCATGTAAAGAAGGTGACAAGTTCTTACCCACCATTAATACTGGACTCTTCAATAGATCAGGGTCCCTATGTAAACATTGCAGAAGATGGAATGGTAGCTGCAGTGGGCAATGAACAGATAGAAGAGAATAGGGTAGAAGATGTACTTGAATCAGGAGAAGGTAAAATTTCAGCAGAGCGAGATCAACAGCGGCCACAGCCAGAGTCGGATTCTTTGGCTGGTGTTGTAGAATCTTCTGAACAAGCTACTACGCCTCTTGATGTAATTGCTCCTGTTAGAAGATGCTTAGATCTGCTATCTCGACAGAGTAAGTGGTCATTGTGGTTGCTTGTTTATATTGCTATTGTGACAAGTTGGCCAGTGGTAGGTTCTGTCCTCCAGATTGCATTGCAAAAGAAGCTCAGAAATGTCTTACCTGGTGCTTTCTTCAAAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

579

Amino Acids

64.54

Weight (kDa)

6.6

Isoelectric Point (pI)

46.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	166 - 277	5.6e-11	Serine aminopeptidase, S33
Abhydrolase_1	PF00561	168 - 409	4.6e-10	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04080 AT1G04080 AT1G04080 AT1G04080 AT1G04080
fragaria_vesca	FvH4_2g20550
malus_domestica	MD00G1060100.v1.1
prunus_persica	Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1
pyrus_communis	pycom05g17390 pycom10g15270
rosa_chinensis	RchiOBHm_Chr1g0327141 RchiOBHm_Chr6g0282561 RchiOBHm_Chr6g0286711
rosa_laevigata	RLG00000007391 RLG00000012550 RLG00000030995
rosa_multiflora	Rmu_co8283097.1_g000001 Rmu_co8332197.1_g000001 Rmu_sc0001468.1_g000022
rosa_roxburghii	Rroxscaffold_1G00034270 Rroxscaffold_1G00060390 Rroxscaffold_7G00182090
rosa_rugosa	Rorug05G0468800 Rorug06G0182100 Rorug06G0182200
rosa_samantha	Rh2CG306300 Rh5BG355000 Rh5BG355100 Rh5BG357900 Rh6AG023000 Rh6AG294900 Rh6BG204700 Rh6BG298100 Rh6BG298200 Rh6CG298600 Rh6DG290600
rosa_wichuraiana	Rw1G013170 Rw5G035150 Rw6G025370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	654, 857
AatII	GACGTC	1 cut(s)	267
Acc36I	ACCTGC	1 cut(s)	32
AccB7I	CCANNNNNTGG	3 cut(s)	13, 803, 1149
AccI	GTMKAC	1 cut(s)	865
AccII	CGCG	2 cut(s)	979, 1200
AciI	CCGC	7 cut(s)	30, 361, 382, 679, 1012, 1200, 1492
AclI	AACGTT	1 cut(s)	594
AclWI	GGATC	2 cut(s)	681, 1115
AcoI	YGGCCR	3 cut(s)	358, 1493, 1658
AcsI	RAATTY	5 cut(s)	176, 879, 1025, 1268, 1467
AcuI	CTGAAG	1 cut(s)	55
AcyI	GRCGYC	1 cut(s)	264
AfaI	GTAC	2 cut(s)	1132, 1446
AfiI	CCNNNNNNNGG	7 cut(s)	13, 279, 367, 429, 803, 1149, 1667
AgsI	TTSAA	7 cut(s)	376, 633, 911, 1223, 1353, 1451, 1732
AjnI	CCWGG	4 cut(s)	293, 311, 520, 1717
AloI	GAACNNNNNNTCC	2 cut(s)	777, 809
AluBI	AGCT	7 cut(s)	69, 809, 893, 1238, 1400, 1547, 1702
AluI	AGCT	7 cut(s)	69, 809, 893, 1238, 1400, 1547, 1702
Alw21I	GWGCWC	1 cut(s)	895
Alw26I	GTCTC	2 cut(s)	356, 1025
AlwI	GGATC	2 cut(s)	681, 1115
AlwNI	CAGNNNCTG	3 cut(s)	216, 803, 1056
AoxI	GGCC	5 cut(s)	132, 358, 904, 1493, 1658
ApeKI	GCWGC	4 cut(s)	66, 216, 1235, 1400
ApoI	RAATTY	5 cut(s)	176, 879, 1025, 1268, 1467
AseI	ATTAAT	2 cut(s)	690, 1337
Asp700I	GAANNNNTTC	2 cut(s)	393, 1143
AspLEI	GCGC	5 cut(s)	6, 580, 981, 1056, 1200
AspS9I	GGNCC	2 cut(s)	832, 1364
AsuHPI	GGTGA	4 cut(s)	193, 298, 857, 1327
AsuNHI	GCTAGC	1 cut(s)	511
AvaII	GGWCC	2 cut(s)	832, 1364
BalI	TGGCCA	1 cut(s)	1660
BanII	GRGCYC	1 cut(s)	895
BauI	CACGAG	1 cut(s)	128
BbsI	GAAGAC	1 cut(s)	334
Bbv12I	GWGCWC	1 cut(s)	895
BbvI	GCAGC	4 cut(s)	78, 203, 1247, 1387
BccI	CCATC	6 cut(s)	7, 401, 582, 708, 776, 1382
BceAI	ACGGC	2 cut(s)	591, 846
BciT130I	CCWGG	4 cut(s)	295, 313, 522, 1719
BclI	TGATCA	1 cut(s)	997
BcoDI	GTCTC	2 cut(s)	356, 1025
BfaI	CTAG	4 cut(s)	83, 512, 1068, 1134
BfmI	CTRYAG	4 cut(s)	810, 1057, 1233, 1401
BfoI	RGCGCY	1 cut(s)	1057
BfuAI	ACCTGC	1 cut(s)	32
BglI	GCCNNNNNGGC	1 cut(s)	912
BglII	AGATCT	1 cut(s)	1591
BisI	GCNGC	6 cut(s)	67, 217, 361, 1236, 1401, 1493
BlsI	GCNGC	6 cut(s)	68, 218, 362, 1237, 1402, 1494
Bme1390I	CCNGG	4 cut(s)	295, 313, 522, 1719
Bme18I	GGWCC	2 cut(s)	832, 1364
BmgT120I	GGNCC	2 cut(s)	832, 1364
BmiI	GGNNCC	4 cut(s)	751, 833, 1365, 1366
BmrFI	CCNGG	4 cut(s)	295, 313, 522, 1719
BmsI	GCATC	3 cut(s)	568, 1251, 1574
BmtI	GCTAGC	1 cut(s)	515
BpiI	GAAGAC	1 cut(s)	334
BpmI	CTGGAG	2 cut(s)	825, 1664
BpuEI	CTTGAG	1 cut(s)	304
BsaBI	GATNNNNATC	2 cut(s)	143, 996
BsaHI	GRCGYC	1 cut(s)	264
BsaJI	CCNNGG	4 cut(s)	311, 423, 827, 1148
BsaWI	WCCGGW	2 cut(s)	203, 367
BsaXI	ACNNNNNCTCC	6 cut(s)	227, 230, 257, 260, 777, 807
Bsc4I	CCNNNNNNNGG	7 cut(s)	13, 279, 367, 429, 803, 1149, 1667
Bse1I	ACTGG	6 cut(s)	441, 474, 797, 1294, 1347, 1661
Bse3DI	GCAATG	3 cut(s)	1377, 1417, 1688
Bse8I	GATNNNNATC	2 cut(s)	143, 996
BseBI	CCWGG	4 cut(s)	295, 313, 522, 1719
BseDI	CCNNGG	4 cut(s)	311, 423, 827, 1148
BseGI	GGATG	5 cut(s)	18, 593, 787, 1159, 1270
BseJI	GATNNNNATC	2 cut(s)	143, 996
BseLI	CCNNNNNNNGG	7 cut(s)	13, 279, 367, 429, 803, 1149, 1667
BseMI	GCAATG	3 cut(s)	1377, 1417, 1688
BseMII	CTCAG	2 cut(s)	361, 1717
BseNI	ACTGG	6 cut(s)	441, 474, 797, 1294, 1347, 1661
BseRI	GAGGAG	4 cut(s)	92, 95, 232, 235
BseX3I	CGGCCG	1 cut(s)	358
BseXI	GCAGC	4 cut(s)	78, 203, 1247, 1387
BseYI	CCCAGC	1 cut(s)	24
BsgI	GTGCAG	1 cut(s)	60
Bsh1236I	CGCG	2 cut(s)	979, 1200
Bsh1285I	CGRYCG	1 cut(s)	361
BshFI	GGCC	5 cut(s)	134, 360, 906, 1495, 1660
BsiEI	CGRYCG	1 cut(s)	361
BsiHKAI	GWGCWC	1 cut(s)	895
BsiSI	CCGG	3 cut(s)	204, 280, 368
BslFI	GGGAC	2 cut(s)	845, 1350
BslI	CCNNNNNNNGG	7 cut(s)	13, 279, 367, 429, 803, 1149, 1667
BsmAI	GTCTC	2 cut(s)	356, 1025
BsmFI	GGGAC	2 cut(s)	845, 1350
BsmI	GAATGC	2 cut(s)	155, 1163
BsnI	GGCC	5 cut(s)	134, 360, 906, 1495, 1660
Bsp1286I	GDGCHC	1 cut(s)	895
Bsp143I	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
BspACI	CCGC	7 cut(s)	30, 361, 382, 679, 1012, 1200, 1492
BspANI	GGCC	5 cut(s)	134, 360, 906, 1495, 1660
BspCNI	CTCAG	2 cut(s)	360, 1716
BspFNI	CGCG	2 cut(s)	979, 1200
BspHI	TCATGA	1 cut(s)	703
BspLI	GGNNCC	4 cut(s)	751, 833, 1365, 1366
BspMAI	CTGCAG	2 cut(s)	1237, 1405
BspMI	ACCTGC	1 cut(s)	32
BspOI	GCTAGC	1 cut(s)	515
BspPI	GGATC	2 cut(s)	681, 1115
BsrDI	GCAATG	3 cut(s)	1377, 1417, 1688
BsrI	ACTGG	6 cut(s)	441, 474, 797, 1294, 1347, 1661
BssECI	CCNNGG	4 cut(s)	311, 423, 827, 1148
BssMI	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
BssNI	GRCGYC	1 cut(s)	264
BssSI	CACGAG	1 cut(s)	128
BssT1I	CCWWGG	3 cut(s)	423, 827, 1148
Bst2BI	CACGAG	1 cut(s)	128
Bst2UI	CCWGG	4 cut(s)	295, 313, 522, 1719
Bst4CI	ACNGT	3 cut(s)	340, 870, 1036
Bst6I	CTCTTC	4 cut(s)	203, 359, 1354, 1419
BstACI	GRCGYC	1 cut(s)	264
BstC8I	GCNNGC	4 cut(s)	64, 513, 681, 1240
BstDEI	CTNAG	3 cut(s)	347, 1588, 1703
BstEII	GGTNACC	1 cut(s)	304
BstF5I	GGATG	5 cut(s)	18, 593, 787, 1159, 1270
BstFNI	CGCG	2 cut(s)	979, 1200
BstH2I	RGCGCY	1 cut(s)	1057
BstHHI	GCGC	5 cut(s)	6, 580, 981, 1056, 1200
BstKTI	GATC	8 cut(s)	100, 141, 676, 1000, 1123, 1360, 1486, 1594
BstMAI	GTCTC	2 cut(s)	356, 1025
BstMBI	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
BstMCI	CGRYCG	1 cut(s)	361
BstMWI	GCNNNNNNNGC	5 cut(s)	72, 140, 912, 1498, 1699
BstNI	CCWGG	4 cut(s)	295, 313, 522, 1719
BstNSI	RCATGY	1 cut(s)	1307
BstPI	GGTNACC	1 cut(s)	304
BstSCI	CCNGG	4 cut(s)	293, 311, 520, 1717
BstSFI	CTRYAG	4 cut(s)	810, 1057, 1233, 1401
BstUI	CGCG	2 cut(s)	979, 1200
BstV1I	GCAGC	4 cut(s)	78, 203, 1247, 1387
BstV2I	GAAGAC	1 cut(s)	334
BstX2I	RGATCY	2 cut(s)	673, 1591
BstXI	CCANNNNNNTGG	2 cut(s)	301, 760
BstYI	RGATCY	2 cut(s)	673, 1591
BstZI	CGGCCG	1 cut(s)	358
BsuRI	GGCC	5 cut(s)	134, 360, 906, 1495, 1660
BtsCI	GGATG	5 cut(s)	18, 593, 787, 1159, 1270
BtsI	GCAGTG	2 cut(s)	1069, 1410
BtsIMutI	CAGTG	6 cut(s)	481, 1069, 1095, 1114, 1410, 1668
BveI	ACCTGC	1 cut(s)	32
Cac8I	GCNNGC	4 cut(s)	64, 513, 681, 1240
CaiI	CAGNNNCTG	3 cut(s)	216, 803, 1056
CciI	TCATGA	1 cut(s)	703
CfoI	GCGC	5 cut(s)	6, 580, 981, 1056, 1200
Cfr13I	GGNCC	2 cut(s)	832, 1364
CsiI	ACCWGGT	1 cut(s)	1717
Csp6I	GTAC	2 cut(s)	1131, 1445
CviAII	CATG	4 cut(s)	191, 704, 1004, 1304
CviQI	GTAC	2 cut(s)	1131, 1445
DdeI	CTNAG	3 cut(s)	347, 1588, 1703
DpnI	GATC	8 cut(s)	99, 140, 675, 999, 1122, 1359, 1485, 1593
DpnII	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
DraI	TTTAAA	1 cut(s)	1275
EaeI	YGGCCR	3 cut(s)	358, 1493, 1658
EagI	CGGCCG	1 cut(s)	358
Eam1104I	CTCTTC	4 cut(s)	203, 359, 1354, 1419
EarI	CTCTTC	4 cut(s)	203, 359, 1354, 1419
EciI	GGCGGA	1 cut(s)	45
Ecl136II	GAGCTC	1 cut(s)	893
EclXI	CGGCCG	1 cut(s)	358
Eco130I	CCWWGG	3 cut(s)	423, 827, 1148
Eco24I	GRGCYC	1 cut(s)	895
Eco47I	GGWCC	2 cut(s)	832, 1364
Eco52I	CGGCCG	1 cut(s)	358
Eco53kI	GAGCTC	1 cut(s)	893
Eco57I	CTGAAG	1 cut(s)	55
Eco91I	GGTNACC	1 cut(s)	304
EcoICRI	GAGCTC	1 cut(s)	893
EcoO109I	RGGNCCY	2 cut(s)	832, 1364
EcoO65I	GGTNACC	1 cut(s)	304
EcoRI	GAATTC	1 cut(s)	176
EcoRII	CCWGG	4 cut(s)	293, 311, 520, 1717
EcoT14I	CCWWGG	3 cut(s)	423, 827, 1148
EcoT22I	ATGCAT	1 cut(s)	1305
EcoT38I	GRGCYC	1 cut(s)	895
ErhI	CCWWGG	3 cut(s)	423, 827, 1148
FaeI	CATG	4 cut(s)	194, 707, 1007, 1307
FalI	AAGNNNNNCTT	2 cut(s)	1431, 1463
FaqI	GGGAC	2 cut(s)	845, 1350
FatI	CATG	4 cut(s)	190, 703, 1003, 1303
FauI	CCCGC	2 cut(s)	672, 1019
FbaI	TGATCA	1 cut(s)	997
FblI	GTMKAC	1 cut(s)	865
Fnu4HI	GCNGC	6 cut(s)	67, 217, 361, 1236, 1401, 1493
FokI	GGATG	5 cut(s)	25, 600, 794, 1166, 1277
FriOI	GRGCYC	1 cut(s)	895
Fsp4HI	GCNGC	6 cut(s)	67, 217, 361, 1236, 1401, 1493
FspBI	CTAG	4 cut(s)	83, 512, 1068, 1134
GlaI	GCGC	5 cut(s)	5, 579, 980, 1055, 1199
GluI	GCNGC	6 cut(s)	67, 217, 361, 1236, 1401, 1493
GsaI	CCCAGC	1 cut(s)	28
GsuI	CTGGAG	2 cut(s)	825, 1664
HaeII	RGCGCY	1 cut(s)	1057
HaeIII	GGCC	5 cut(s)	134, 360, 906, 1495, 1660
HapII	CCGG	3 cut(s)	204, 280, 368
HhaI	GCGC	5 cut(s)	6, 580, 981, 1056, 1200
Hin1I	GRCGYC	1 cut(s)	264
Hin1II	CATG	4 cut(s)	194, 707, 1007, 1307
Hin6I	GCGC	5 cut(s)	4, 578, 979, 1054, 1198
HinP1I	GCGC	5 cut(s)	4, 578, 979, 1054, 1198
HpaII	CCGG	3 cut(s)	204, 280, 368
HphI	GGTGA	4 cut(s)	193, 298, 857, 1327
Hpy166II	GTNNAC	3 cut(s)	866, 1039, 1375
Hpy188III	TCNNGA	6 cut(s)	704, 989, 1455, 1559, 1602, 1681
Hpy8I	GTNNAC	3 cut(s)	866, 1039, 1375
Hpy99I	CGWCG	3 cut(s)	227, 266, 269
HpyAV	CCTTC	6 cut(s)	845, 917, 956, 1217, 1306, 1454
HpyCH4III	ACNGT	3 cut(s)	340, 870, 1036
HpyCH4IV	ACGT	2 cut(s)	264, 594
HpyF10VI	GCNNNNNNNGC	5 cut(s)	72, 140, 912, 1498, 1699
HpyF3I	CTNAG	3 cut(s)	347, 1588, 1703
HpySE526I	ACGT	2 cut(s)	264, 594
Hsp92I	GRCGYC	1 cut(s)	264
Hsp92II	CATG	4 cut(s)	194, 707, 1007, 1307
HspAI	GCGC	5 cut(s)	4, 578, 979, 1054, 1198
KflI	GGGWCCC	1 cut(s)	1364
Ksp22I	TGATCA	1 cut(s)	997
Kzo9I	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
LmnI	GCTCC	5 cut(s)	224, 724, 749, 806, 1576
Lsp1109I	GCAGC	4 cut(s)	78, 203, 1247, 1387
LweI	GCATC	3 cut(s)	568, 1251, 1574
MabI	ACCWGGT	1 cut(s)	1717
MaeI	CTAG	4 cut(s)	83, 512, 1068, 1134
MaeII	ACGT	2 cut(s)	264, 594
MaeIII	GTNAC	6 cut(s)	304, 432, 458, 601, 1315, 1648
MalI	GATC	8 cut(s)	99, 140, 675, 999, 1122, 1359, 1485, 1593
MboI	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
MfeI	CAATTG	1 cut(s)	900
MflI	RGATCY	2 cut(s)	673, 1591
MhlI	GDGCHC	1 cut(s)	895
MlsI	TGGCCA	1 cut(s)	1660
MluNI	TGGCCA	1 cut(s)	1660
MlyI	GAGTC	5 cut(s)	27, 434, 530, 1340, 1514
MmeI	TCCRAC	3 cut(s)	644, 715, 1488
Mox20I	TGGCCA	1 cut(s)	1660
Mph1103I	ATGCAT	1 cut(s)	1305
MroXI	GAANNNNTTC	2 cut(s)	393, 1143
MscI	TGGCCA	1 cut(s)	1660
MseI	TTAA	6 cut(s)	570, 690, 1172, 1229, 1274, 1337
Msp20I	TGGCCA	1 cut(s)	1660
MspA1I	CMGCKG	2 cut(s)	1238, 1492
MspI	CCGG	3 cut(s)	204, 280, 368
MspR9I	CCNGG	4 cut(s)	295, 313, 522, 1719
MunI	CAATTG	1 cut(s)	900
Mva1269I	GAATGC	2 cut(s)	155, 1163
MvaI	CCWGG	4 cut(s)	295, 313, 522, 1719
MvnI	CGCG	2 cut(s)	979, 1200
MwoI	GCNNNNNNNGC	5 cut(s)	72, 140, 912, 1498, 1699
NdeII	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
NheI	GCTAGC	1 cut(s)	511
NlaIII	CATG	4 cut(s)	194, 707, 1007, 1307
NlaIV	GGNNCC	4 cut(s)	751, 833, 1365, 1366
NmuCI	GTSAC	3 cut(s)	304, 1315, 1648
NsiI	ATGCAT	1 cut(s)	1305
NspI	RCATGY	1 cut(s)	1307
PagI	TCATGA	1 cut(s)	703
PctI	GAATGC	2 cut(s)	155, 1163
PdmI	GAANNNNTTC	2 cut(s)	393, 1143
PfeI	GAWTC	6 cut(s)	207, 283, 542, 1451, 1511, 1532
PflMI	CCANNNNNTGG	3 cut(s)	13, 803, 1149
PfoI	TCCNGGA	1 cut(s)	520
PkrI	GCNGC	6 cut(s)	68, 218, 362, 1237, 1402, 1494
PleI	GAGTC	5 cut(s)	27, 434, 530, 1340, 1513
PpsI	GAGTC	5 cut(s)	27, 434, 530, 1340, 1513
PpuMI	RGGWCCY	2 cut(s)	832, 1364
PshBI	ATTAAT	2 cut(s)	690, 1337
PsiI	TTATAA	2 cut(s)	654, 857
Psp124BI	GAGCTC	1 cut(s)	895
Psp1406I	AACGTT	1 cut(s)	594
Psp5II	RGGWCCY	2 cut(s)	832, 1364
Psp6I	CCWGG	4 cut(s)	293, 311, 520, 1717
PspEI	GGTNACC	1 cut(s)	304
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	4 cut(s)	293, 311, 520, 1717
PspN4I	GGNNCC	4 cut(s)	751, 833, 1365, 1366
PspPI	GGNCC	2 cut(s)	832, 1364
PspPPI	RGGWCCY	2 cut(s)	832, 1364
PstI	CTGCAG	2 cut(s)	1237, 1405
PstNI	CAGNNNCTG	3 cut(s)	216, 803, 1056
PsuI	RGATCY	2 cut(s)	673, 1591
PvuII	CAGCTG	1 cut(s)	1238
RsaI	GTAC	2 cut(s)	1132, 1446
RsaNI	GTAC	2 cut(s)	1131, 1445
SacI	GAGCTC	1 cut(s)	895
SaqAI	TTAA	6 cut(s)	570, 690, 1172, 1229, 1274, 1337
SatI	GCNGC	6 cut(s)	67, 217, 361, 1236, 1401, 1493
Sau3AI	GATC	8 cut(s)	97, 138, 673, 997, 1120, 1357, 1483, 1591
Sau96I	GGNCC	2 cut(s)	832, 1364
SchI	GAGTC	5 cut(s)	27, 434, 530, 1340, 1514
ScrFI	CCNGG	4 cut(s)	295, 313, 522, 1719
SduI	GDGCHC	1 cut(s)	895
SexAI	ACCWGGT	1 cut(s)	1717
SfaNI	GCATC	3 cut(s)	568, 1251, 1574
SfcI	CTRYAG	4 cut(s)	810, 1057, 1233, 1401
SinI	GGWCC	2 cut(s)	832, 1364
SmlI	CTYRAG	1 cut(s)	319
SmoI	CTYRAG	1 cut(s)	319
SsiI	CCGC	7 cut(s)	30, 361, 382, 679, 1012, 1200, 1492
SspI	AATATT	1 cut(s)	1177
SspMI	CTAG	4 cut(s)	83, 512, 1068, 1134
SstI	GAGCTC	1 cut(s)	895
StyD4I	CCNGG	4 cut(s)	293, 311, 520, 1717
StyI	CCWWGG	3 cut(s)	423, 827, 1148
TaaI	ACNGT	3 cut(s)	340, 870, 1036
TaiI	ACGT	2 cut(s)	267, 597
TaqI	TCGA	2 cut(s)	174, 1603
TatI	WGTACW	2 cut(s)	1130, 1444
TauI	GCSGC	2 cut(s)	363, 1495
TfiI	GAWTC	6 cut(s)	207, 283, 542, 1451, 1511, 1532
Tru1I	TTAA	6 cut(s)	570, 690, 1172, 1229, 1274, 1337
Tru9I	TTAA	6 cut(s)	570, 690, 1172, 1229, 1274, 1337
TscAI	CASTG	6 cut(s)	481, 1069, 1095, 1114, 1410, 1668
TseFI	GTSAC	3 cut(s)	304, 1315, 1648
TseI	GCWGC	4 cut(s)	66, 216, 1235, 1400
Tsp45I	GTSAC	3 cut(s)	304, 1315, 1648
TspDTI	ATGAA	5 cut(s)	386, 720, 1170, 1281, 1428
TspGWI	ACGGA	2 cut(s)	26, 211
TspRI	CASTG	6 cut(s)	481, 1069, 1095, 1114, 1410, 1668
Van91I	CCANNNNNTGG	3 cut(s)	13, 803, 1149
VpaK11BI	GGWCC	2 cut(s)	832, 1364
VspI	ATTAAT	2 cut(s)	690, 1337
XapI	RAATTY	5 cut(s)	176, 879, 1025, 1268, 1467
XceI	RCATGY	1 cut(s)	1307
XmiI	GTMKAC	1 cut(s)	865
XmnI	GAANNNNTTC	2 cut(s)	393, 1143
XspI	CTAG	4 cut(s)	83, 512, 1068, 1134
ZraI	GACGTC	1 cut(s)	265
Zsp2I	ATGCAT	1 cut(s)	1305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.