pre-mRNA-processing factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04080 AT1G04080 AT1G04080 AT1G04080 AT1G04080 |
| fragaria_vesca | FvH4_2g20550 |
| malus_domestica | MD00G1060100.v1.1 |
| prunus_persica | Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 |
| pyrus_communis | pycom05g17390 pycom10g15270 |
| rosa_chinensis | RchiOBHm_Chr1g0327141 RchiOBHm_Chr6g0282561 RchiOBHm_Chr6g0286711 |
| rosa_laevigata | RLG00000007391 RLG00000012550 RLG00000030995 |
| rosa_multiflora | Rmu_co8283097.1_g000001 Rmu_co8332197.1_g000001 Rmu_sc0001468.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00034270 Rroxscaffold_1G00060390 Rroxscaffold_7G00182090 |
| rosa_rugosa | Rorug05G0468800 Rorug06G0182100 Rorug06G0182200 |
| rosa_samantha | Rh2CG306300 Rh5BG355000 Rh5BG355100 Rh5BG357900 Rh6AG023000 Rh6AG294900 Rh6BG204700 Rh6BG298100 Rh6BG298200 Rh6CG298600 Rh6DG290600 |
| rosa_wichuraiana | Rw1G013170 Rw5G035150 Rw6G025370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 298 |
| AcsI | RAATTY | 1 cut(s) | 117 |
| AcuI | CTGAAG | 1 cut(s) | 30 |
| AgsI | TTSAA | 2 cut(s) | 115, 238 |
| AjnI | CCWGG | 1 cut(s) | 62 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 218, 250 |
| AluBI | AGCT | 1 cut(s) | 241 |
| AluI | AGCT | 1 cut(s) | 241 |
| Alw26I | GTCTC | 1 cut(s) | 77 |
| AlwI | GGATC | 1 cut(s) | 298 |
| ApoI | RAATTY | 1 cut(s) | 117 |
| AsuII | TTCGAA | 1 cut(s) | 121 |
| BciT130I | CCWGG | 1 cut(s) | 64 |
| BcoDI | GTCTC | 1 cut(s) | 77 |
| BfaI | CTAG | 2 cut(s) | 143, 403 |
| Bme1390I | CCNGG | 1 cut(s) | 64 |
| BmrFI | CCNGG | 1 cut(s) | 64 |
| BmsI | GCATC | 1 cut(s) | 124 |
| Bpu14I | TTCGAA | 1 cut(s) | 121 |
| BseBI | CCWGG | 1 cut(s) | 64 |
| BsgI | GTGCAG | 1 cut(s) | 261 |
| BsmAI | GTCTC | 1 cut(s) | 77 |
| BsmI | GAATGC | 1 cut(s) | 342 |
| Bsp119I | TTCGAA | 1 cut(s) | 121 |
| Bsp143I | GATC | 2 cut(s) | 187, 303 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BspPI | GGATC | 1 cut(s) | 298 |
| BspT104I | TTCGAA | 1 cut(s) | 121 |
| BssMI | GATC | 2 cut(s) | 187, 303 |
| Bst2UI | CCWGG | 1 cut(s) | 64 |
| BstBI | TTCGAA | 1 cut(s) | 121 |
| BstKTI | GATC | 2 cut(s) | 190, 306 |
| BstMAI | GTCTC | 1 cut(s) | 77 |
| BstMBI | GATC | 2 cut(s) | 187, 303 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 68, 143, 238 |
| BstNI | CCWGG | 1 cut(s) | 64 |
| BstNSI | RCATGY | 1 cut(s) | 361 |
| BstSCI | CCNGG | 1 cut(s) | 62 |
| BstX2I | RGATCY | 1 cut(s) | 303 |
| BstYI | RGATCY | 1 cut(s) | 303 |
| CciI | TCATGA | 1 cut(s) | 190 |
| CviAII | CATG | 3 cut(s) | 191, 358, 379 |
| CviJI | RGCY | 2 cut(s) | 41, 241 |
| CviKI_1 | RGCY | 2 cut(s) | 41, 241 |
| DpnI | GATC | 2 cut(s) | 189, 305 |
| DpnII | GATC | 2 cut(s) | 187, 303 |
| Eco57I | CTGAAG | 1 cut(s) | 30 |
| EcoRII | CCWGG | 1 cut(s) | 62 |
| EcoT22I | ATGCAT | 1 cut(s) | 344 |
| FaeI | CATG | 3 cut(s) | 194, 361, 382 |
| FaiI | YATR | 9 cut(s) | 25, 132, 165, 183, 192, 340, 359, 372, 380 |
| FatI | CATG | 3 cut(s) | 190, 357, 378 |
| FspBI | CTAG | 2 cut(s) | 143, 403 |
| Hin1II | CATG | 3 cut(s) | 194, 361, 382 |
| HincII | GTYRAC | 1 cut(s) | 258 |
| HindII | GTYRAC | 1 cut(s) | 258 |
| Hpy166II | GTNNAC | 2 cut(s) | 226, 258 |
| Hpy188I | TCNGA | 1 cut(s) | 319 |
| Hpy188III | TCNNGA | 3 cut(s) | 112, 191, 307 |
| Hpy8I | GTNNAC | 2 cut(s) | 226, 258 |
| HpyAV | CCTTC | 2 cut(s) | 85, 314 |
| HpyCH4IV | ACGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 6 cut(s) | 185, 270, 278, 342, 378, 395 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 68, 143, 238 |
| HpySE526I | ACGT | 1 cut(s) | 199 |
| Hsp92II | CATG | 3 cut(s) | 194, 361, 382 |
| Kzo9I | GATC | 2 cut(s) | 187, 303 |
| LpnPI | CCDG | 4 cut(s) | 49, 76, 320, 375 |
| LweI | GCATC | 1 cut(s) | 124 |
| MaeI | CTAG | 2 cut(s) | 143, 403 |
| MaeII | ACGT | 1 cut(s) | 199 |
| MaeIII | GTNAC | 1 cut(s) | 243 |
| MalI | GATC | 2 cut(s) | 189, 305 |
| MboI | GATC | 2 cut(s) | 187, 303 |
| MboII | GAAGA | 2 cut(s) | 23, 26 |
| MflI | RGATCY | 1 cut(s) | 303 |
| MluCI | AATT | 3 cut(s) | 43, 75, 117 |
| MnlI | CCTC | 3 cut(s) | 30, 94, 187 |
| Mph1103I | ATGCAT | 1 cut(s) | 344 |
| MseI | TTAA | 2 cut(s) | 57, 74 |
| MspR9I | CCNGG | 1 cut(s) | 64 |
| Mva1269I | GAATGC | 1 cut(s) | 342 |
| MvaI | CCWGG | 1 cut(s) | 64 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 68, 143, 238 |
| NdeII | GATC | 2 cut(s) | 187, 303 |
| NlaIII | CATG | 3 cut(s) | 194, 361, 382 |
| NsiI | ATGCAT | 1 cut(s) | 344 |
| NspI | RCATGY | 1 cut(s) | 361 |
| NspV | TTCGAA | 1 cut(s) | 121 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PctI | GAATGC | 1 cut(s) | 342 |
| Psp6I | CCWGG | 1 cut(s) | 62 |
| PspGI | CCWGG | 1 cut(s) | 62 |
| PsuI | RGATCY | 1 cut(s) | 303 |
| SaqAI | TTAA | 2 cut(s) | 57, 74 |
| Sau3AI | GATC | 2 cut(s) | 187, 303 |
| ScrFI | CCNGG | 1 cut(s) | 64 |
| SetI | ASST | 5 cut(s) | 96, 202, 243, 250, 325 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SfuI | TTCGAA | 1 cut(s) | 121 |
| Sse9I | AATT | 3 cut(s) | 43, 75, 117 |
| SspMI | CTAG | 2 cut(s) | 143, 403 |
| StyD4I | CCNGG | 1 cut(s) | 62 |
| TaiI | ACGT | 1 cut(s) | 202 |
| TaqI | TCGA | 1 cut(s) | 121 |
| TasI | AATT | 3 cut(s) | 43, 75, 117 |
| Tru1I | TTAA | 2 cut(s) | 57, 74 |
| Tru9I | TTAA | 2 cut(s) | 57, 74 |
| XapI | RAATTY | 1 cut(s) | 117 |
| XceI | RCATGY | 1 cut(s) | 361 |
| XspI | CTAG | 2 cut(s) | 143, 403 |
| Zsp2I | ATGCAT | 1 cut(s) | 344 |