No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04080 AT1G04080 AT1G04080 AT1G04080 AT1G04080 |
| fragaria_vesca | FvH4_2g20550 |
| malus_domestica | MD00G1060100.v1.1 |
| prunus_persica | Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 |
| pyrus_communis | pycom05g17390 pycom10g15270 |
| rosa_chinensis | RchiOBHm_Chr1g0327141 RchiOBHm_Chr6g0282561 RchiOBHm_Chr6g0286711 |
| rosa_laevigata | RLG00000007391 RLG00000012550 RLG00000030995 |
| rosa_multiflora | Rmu_co8283097.1_g000001 Rmu_co8332197.1_g000001 Rmu_sc0001468.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00034270 Rroxscaffold_1G00060390 Rroxscaffold_7G00182090 |
| rosa_rugosa | Rorug05G0468800 Rorug06G0182100 Rorug06G0182200 |
| rosa_samantha | Rh2CG306300 Rh5BG355000 Rh5BG355100 Rh5BG357900 Rh6AG023000 Rh6AG294900 Rh6BG204700 Rh6BG298100 Rh6BG298200 Rh6CG298600 Rh6DG290600 |
| rosa_wichuraiana | Rw1G013170 Rw5G035150 Rw6G025370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 138 |
| AcsI | RAATTY | 1 cut(s) | 87 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 134 |
| AgsI | TTSAA | 3 cut(s) | 53, 79, 86 |
| AjnI | CCWGG | 1 cut(s) | 42 |
| AluBI | AGCT | 1 cut(s) | 82 |
| AluI | AGCT | 1 cut(s) | 82 |
| AlwI | GGATC | 1 cut(s) | 138 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApoI | RAATTY | 1 cut(s) | 87 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 138 |
| AspS9I | GGNCC | 1 cut(s) | 174 |
| BbsI | GAAGAC | 1 cut(s) | 41 |
| BccI | CCATC | 2 cut(s) | 7, 25 |
| BciT130I | CCWGG | 1 cut(s) | 44 |
| BfaI | CTAG | 1 cut(s) | 56 |
| BfmI | CTRYAG | 1 cut(s) | 169 |
| Bme1390I | CCNGG | 1 cut(s) | 44 |
| BmgT120I | GGNCC | 1 cut(s) | 174 |
| BmiI | GGNNCC | 1 cut(s) | 176 |
| BmrFI | CCNGG | 1 cut(s) | 44 |
| BmrI | ACTGGG | 1 cut(s) | 172 |
| BmuI | ACTGGG | 1 cut(s) | 172 |
| BpiI | GAAGAC | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 1 cut(s) | 43 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 20, 50 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 134 |
| Bse1I | ACTGG | 1 cut(s) | 178 |
| BseBI | CCWGG | 1 cut(s) | 44 |
| BseDI | CCNNGG | 1 cut(s) | 43 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 134 |
| BseNI | ACTGG | 1 cut(s) | 178 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 134 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp143I | GATC | 1 cut(s) | 143 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspLI | GGNNCC | 1 cut(s) | 176 |
| BspPI | GGATC | 1 cut(s) | 138 |
| BsrI | ACTGG | 1 cut(s) | 178 |
| BssECI | CCNNGG | 1 cut(s) | 43 |
| BssMI | GATC | 1 cut(s) | 143 |
| Bst2UI | CCWGG | 1 cut(s) | 44 |
| Bst4CI | ACNGT | 2 cut(s) | 23, 163 |
| BstKTI | GATC | 1 cut(s) | 146 |
| BstMBI | GATC | 1 cut(s) | 143 |
| BstNI | CCWGG | 1 cut(s) | 44 |
| BstSCI | CCNGG | 1 cut(s) | 42 |
| BstSFI | CTRYAG | 1 cut(s) | 169 |
| BstV2I | GAAGAC | 1 cut(s) | 41 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtsIMutI | CAGTG | 2 cut(s) | 159, 185 |
| Cfr13I | GGNCC | 1 cut(s) | 174 |
| CviAII | CATG | 1 cut(s) | 39 |
| CviJI | RGCY | 3 cut(s) | 82, 138, 175 |
| CviKI_1 | RGCY | 3 cut(s) | 82, 138, 175 |
| DpnI | GATC | 1 cut(s) | 145 |
| DpnII | GATC | 1 cut(s) | 143 |
| EcoO109I | RGGNCCY | 1 cut(s) | 174 |
| EcoRII | CCWGG | 1 cut(s) | 42 |
| FaeI | CATG | 1 cut(s) | 42 |
| FaiI | YATR | 3 cut(s) | 40, 96, 171 |
| FatI | CATG | 1 cut(s) | 38 |
| FspBI | CTAG | 1 cut(s) | 56 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| Hin1II | CATG | 1 cut(s) | 42 |
| HindIII | AAGCTT | 1 cut(s) | 80 |
| HinfI | GANTC | 2 cut(s) | 5, 35 |
| HpyAV | CCTTC | 1 cut(s) | 128 |
| HpyCH4III | ACNGT | 2 cut(s) | 23, 163 |
| Hsp92II | CATG | 1 cut(s) | 42 |
| Kzo9I | GATC | 1 cut(s) | 143 |
| LpnPI | CCDG | 3 cut(s) | 29, 56, 141 |
| MaeI | CTAG | 1 cut(s) | 56 |
| MaeIII | GTNAC | 1 cut(s) | 157 |
| MalI | GATC | 1 cut(s) | 145 |
| MboI | GATC | 1 cut(s) | 143 |
| MboII | GAAGA | 2 cut(s) | 22, 41 |
| MluCI | AATT | 2 cut(s) | 87, 116 |
| MlyI | GAGTC | 1 cut(s) | 44 |
| MnlI | CCTC | 1 cut(s) | 53 |
| MroXI | GAANNNNTTC | 1 cut(s) | 138 |
| MspR9I | CCNGG | 1 cut(s) | 44 |
| MvaI | CCWGG | 1 cut(s) | 44 |
| NdeII | GATC | 1 cut(s) | 143 |
| NlaIII | CATG | 1 cut(s) | 42 |
| NlaIV | GGNNCC | 1 cut(s) | 176 |
| NmuCI | GTSAC | 1 cut(s) | 157 |
| PdmI | GAANNNNTTC | 1 cut(s) | 138 |
| PleI | GAGTC | 1 cut(s) | 43 |
| PpsI | GAGTC | 1 cut(s) | 43 |
| Psp6I | CCWGG | 1 cut(s) | 42 |
| PspGI | CCWGG | 1 cut(s) | 42 |
| PspN4I | GGNNCC | 1 cut(s) | 176 |
| PspPI | GGNCC | 1 cut(s) | 174 |
| Sau3AI | GATC | 1 cut(s) | 143 |
| Sau96I | GGNCC | 1 cut(s) | 174 |
| SchI | GAGTC | 1 cut(s) | 44 |
| ScrFI | CCNGG | 1 cut(s) | 44 |
| SetI | ASST | 1 cut(s) | 84 |
| SfcI | CTRYAG | 1 cut(s) | 169 |
| SgeI | CNNG | 8 cut(s) | 19, 51, 55, 56, 68, 95, 140, 160 |
| Sse9I | AATT | 2 cut(s) | 87, 116 |
| SspI | AATATT | 1 cut(s) | 74 |
| SspMI | CTAG | 1 cut(s) | 56 |
| StyD4I | CCNGG | 1 cut(s) | 42 |
| TaaI | ACNGT | 2 cut(s) | 23, 163 |
| TaqI | TCGA | 2 cut(s) | 8, 142 |
| TasI | AATT | 2 cut(s) | 87, 116 |
| TscAI | CASTG | 2 cut(s) | 166, 185 |
| TseFI | GTSAC | 1 cut(s) | 157 |
| Tsp45I | GTSAC | 1 cut(s) | 157 |
| TspRI | CASTG | 2 cut(s) | 166, 185 |
| XapI | RAATTY | 1 cut(s) | 87 |
| XmnI | GAANNNNTTC | 1 cut(s) | 138 |
| XspI | CTAG | 1 cut(s) | 56 |