Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0002317

Physical Location & Seq

Genomic Coordinates Reverse (-)

47932929 .. 47939741

Gene Structure 6813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG298600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGGAGACAGTGAGACTGTTGTTGCTCAAACAAATGCAATGATGGGATATTCATCAGCAGCCTATACTACGACAGGTTATTCTGATTCCAGCTCAAATATTGCTCAGGAGGCTACCACAGAAATTTCTGCTCCTCCTGCTCCTGTAGATGCAACCCATCCAATGCCTGGTGATGGAAATGCATATTCTGTGGCTTCCGATTCTCTCATGCAAGAATCACATTCTTATGCAACATATGAGGCTCAACCAGCTGTTGGTGTTGCTGATGCTGGTGGGAATGTTGCTAACAGTGAACATGAAACCATGGCATCATTGCAAGCTGCCAATTATGATTCTACTGCTAATGGTGTTGCTACTTCTGGGGTGGGAACTGTTTCATCTGTTGGAAATGGAGATGCTTCAGACAACATGGCTGGATCTCTGGATACACAACAATATGTGGACTGTTCTGCTATGTCTGCCGAAGAAGATAGACTATGGAACATTGTTAGGGCTAATTCTTTAGATTTTAATGCCTGGACTGCTTTAATTGAAGAGACAGAGAAGGTTGCAGAGGTGGTCAAGTTATATGAAAGATGCCTGATTGCTTGTGCTAATTATCCTGAATACTGGATTCGTTATGTCCTAAGTATGGAAGCTAGTGGAAGTTTGGATCTTGCCAATAATGCTCTTGATCGTGCAACCCAGGTCTTTGTGAAGAGACAACCAGAGATTCACCTTTTTGCTGCTCGCTTCAAAGAGCAAAGTGGAGATATCCCTGGTGCTCAGGCTGCCTATCAACTCGTACATTCTGAAATTTCACCTGGTCTTCTAGAAGCAATCATTAAGCATGCAAACATGGAACACCGTCTGGGAAATATGGAAGCTGCCTACTCCTTGTTTGAACAGGCCATTGCCATTGAAAAAGGAAAGGAGCATTCTCAGACCTTACCCGTGCTGTTTGCTCAATACGCACGGTTCGCATACTTGGTATCTTTGAATGCTGAAAAAGCCAGGGCTATCTTTCTTGAAGCGGTCGAGCATGTTCAATTGTCAAAAGCATTCCTCGAGGCCCTGATACATTTCGAGTCGATACATTCGTTGCCAAAGCAAATTGATTACATAGATTCCTTGGTTGTGAAGTTCGTGGAGTCCAACTCAGAGAACCCCAATTTTGCGAGTGTTGCTGACAGAGAGGAGTTATCTTGCATCTATTTGGAGTTTCTAAATCTCTTTGGGGATGCACAGTCTATCAAGAAGGCTGAGGATCGGCATGCTAAGCTCTTTTTACTTCATAGGAGCACCACTTCAGAATTGAAAAAACGGCAAGCTGAAGATTACCTATCTTCTGATAAAACAAAGATGGCAAAATCATACTCTGGTGTTCCTTCACCTGCCCAGTCTATTATGGGAGCATATCCAAATGCACAAAATCAGTGGGCAGCTGGTTATGGTGTGCAACCTCAAGCTTGGCCACCAGCTACACAAGCACAGGGACAACAATGGACCCCTGGTTATACCCAACAGGCATACAATGCATATGGTGGTTATCAGCAAGTACCTGCTGCAGTGCCACAGACTGCTGCTTATCCTGCTACATATCCCGCCACATATCCTGCTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

534

Amino Acids

57.95

Weight (kDa)

4.78

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_PRP39_N	PF23240	157 - 230	6.5e-07	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	171 - 283	5.1e-28	PRP39 C-terminal HAT repeat
Suf	PF05843	185 - 345	1e-05	Suppressor of forked protein (Suf)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04080 AT1G04080 AT1G04080 AT1G04080 AT1G04080
fragaria_vesca	FvH4_2g20550
malus_domestica	MD00G1060100.v1.1
prunus_persica	Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1 Prupe.8G215900_v2.0.a1
pyrus_communis	pycom05g17390 pycom10g15270
rosa_chinensis	RchiOBHm_Chr1g0327141 RchiOBHm_Chr6g0282561 RchiOBHm_Chr6g0286711
rosa_laevigata	RLG00000007391 RLG00000012550 RLG00000030995
rosa_multiflora	Rmu_co8283097.1_g000001 Rmu_co8332197.1_g000001 Rmu_sc0001468.1_g000022
rosa_roxburghii	Rroxscaffold_1G00034270 Rroxscaffold_1G00060390 Rroxscaffold_7G00182090
rosa_rugosa	Rorug05G0468800 Rorug06G0182100 Rorug06G0182200
rosa_samantha	Rh2CG306300 Rh5BG355000 Rh5BG355100 Rh5BG357900 Rh6AG023000 Rh6AG294900 Rh6BG204700 Rh6BG298100 Rh6BG298200 Rh6CG298600 Rh6DG290600
rosa_wichuraiana	Rw1G013170 Rw5G035150 Rw6G025370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1381
AbsI	CCTCGAGG	1 cut(s)	1046
Acc36I	ACCTGC	2 cut(s)	1381, 1549
AccB7I	CCANNNNNTGG	2 cut(s)	167, 254
AciI	CCGC	2 cut(s)	1013, 1584
AclWI	GGATC	3 cut(s)	424, 660, 1254
AcoI	YGGCCR	1 cut(s)	1451
AcsI	RAATTY	2 cut(s)	123, 795
AcuI	CTGAAG	3 cut(s)	384, 1272, 1332
AfaI	GTAC	2 cut(s)	786, 1539
AfiI	CCNNNNNNNGG	4 cut(s)	167, 173, 254, 631
AgsI	TTSAA	8 cut(s)	533, 736, 884, 902, 979, 1010, 1028, 1297
AjnI	CCWGG	7 cut(s)	166, 515, 684, 757, 802, 992, 1489
Alw21I	GWGCWC	2 cut(s)	766, 1283
Alw26I	GTCTC	3 cut(s)	8, 530, 694
AlwI	GGATC	3 cut(s)	424, 660, 1254
Ama87I	CYCGRG	1 cut(s)	1046
AoxI	GGCC	3 cut(s)	888, 1050, 1451
ApeKI	GCWGC	8 cut(s)	59, 320, 725, 770, 866, 1421, 1544, 1562
ApoI	RAATTY	2 cut(s)	123, 795
Asp700I	GAANNNNTTC	1 cut(s)	373
AspS9I	GGNCC	2 cut(s)	1051, 1485
AsuHPI	GGTGA	4 cut(s)	182, 707, 792, 1362
AvaI	CYCGRG	1 cut(s)	1046
AvaII	GGWCC	1 cut(s)	1485
BaeI	ACNNNNGTAYC	2 cut(s)	1064, 1097
BalI	TGGCCA	1 cut(s)	1453
BbsI	GAAGAC	1 cut(s)	800
Bbv12I	GWGCWC	2 cut(s)	766, 1283
BbvCI	CCTCAGC	1 cut(s)	1242
BbvI	GCAGC	8 cut(s)	71, 307, 712, 757, 853, 1433, 1531, 1549
BccI	CCATC	4 cut(s)	37, 165, 167, 1336
BceAI	ACGGC	1 cut(s)	1319
BciT130I	CCWGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
BciVI	GTATCC	1 cut(s)	418
BcoDI	GTCTC	3 cut(s)	8, 530, 694
BfaI	CTAG	2 cut(s)	639, 812
BfmI	CTRYAG	2 cut(s)	144, 1545
BfuAI	ACCTGC	2 cut(s)	1381, 1549
BfuI	GTATCC	1 cut(s)	418
BisI	GCNGC	8 cut(s)	60, 321, 726, 771, 867, 1422, 1545, 1563
BlpI	GCTNAGC	1 cut(s)	1257
BlsI	GCNGC	8 cut(s)	61, 322, 727, 772, 868, 1423, 1546, 1564
Bme1390I	CCNGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
Bme18I	GGWCC	1 cut(s)	1485
BmeT110I	CYCGRG	1 cut(s)	1046
BmgT120I	GGNCC	2 cut(s)	1051, 1485
BmiI	GGNNCC	1 cut(s)	1487
BmrFI	CCNGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
BmrI	ACTGGG	1 cut(s)	1372
BmsI	GCATC	7 cut(s)	139, 256, 317, 385, 566, 1197, 1210
BmuI	ACTGGG	1 cut(s)	1372
BpiI	GAAGAC	1 cut(s)	800
BplI	GAGNNNNNCTC	2 cut(s)	1121, 1153
Bpu10I	CCTNAGC	3 cut(s)	105, 765, 1242
Bpu1102I	GCTNAGC	1 cut(s)	1257
BpuEI	CTTGAG	1 cut(s)	1428
BsaBI	GATNNNNATC	1 cut(s)	52
BsaJI	CCNNGG	6 cut(s)	303, 684, 757, 993, 1110, 1489
Bsc4I	CCNNNNNNNGG	4 cut(s)	167, 173, 254, 631
Bse1I	ACTGG	2 cut(s)	614, 1378
Bse3DI	GCAATG	3 cut(s)	45, 311, 891
Bse8I	GATNNNNATC	1 cut(s)	52
BseBI	CCWGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
BseDI	CCNNGG	6 cut(s)	303, 684, 757, 993, 1110, 1489
BseGI	GGATG	2 cut(s)	157, 1225
BseJI	GATNNNNATC	1 cut(s)	52
BseLI	CCNNNNNNNGG	4 cut(s)	167, 173, 254, 631
BseMI	GCAATG	3 cut(s)	45, 311, 891
BseMII	CTCAG	5 cut(s)	119, 779, 935, 1152, 1233
BseNI	ACTGG	2 cut(s)	614, 1378
BseRI	GAGGAG	2 cut(s)	123, 1190
BseXI	GCAGC	8 cut(s)	71, 307, 712, 757, 853, 1433, 1531, 1549
Bsh1285I	CGRYCG	1 cut(s)	1017
BshFI	GGCC	3 cut(s)	890, 1052, 1453
BsiEI	CGRYCG	1 cut(s)	1017
BsiHKAI	GWGCWC	2 cut(s)	766, 1283
BsiHKCI	CYCGRG	1 cut(s)	1046
BslFI	GGGAC	1 cut(s)	1488
BslI	CCNNNNNNNGG	4 cut(s)	167, 173, 254, 631
BsmAI	GTCTC	3 cut(s)	8, 530, 694
BsmFI	GGGAC	1 cut(s)	1488
BsmI	GAATGC	3 cut(s)	916, 985, 1040
BsnI	GGCC	3 cut(s)	890, 1052, 1453
BsoBI	CYCGRG	1 cut(s)	1046
Bsp1286I	GDGCHC	2 cut(s)	766, 1283
Bsp143I	GATC	4 cut(s)	416, 652, 673, 1246
Bsp1720I	GCTNAGC	1 cut(s)	1257
Bsp19I	CCATGG	1 cut(s)	303
BspACI	CCGC	2 cut(s)	1013, 1584
BspANI	GGCC	3 cut(s)	890, 1052, 1453
BspCNI	CTCAG	5 cut(s)	118, 778, 934, 1151, 1234
BspLI	GGNNCC	1 cut(s)	1487
BspMAI	CTGCAG	1 cut(s)	1549
BspMI	ACCTGC	2 cut(s)	1381, 1549
BspPI	GGATC	3 cut(s)	424, 660, 1254
BsrDI	GCAATG	3 cut(s)	45, 311, 891
BsrI	ACTGG	2 cut(s)	614, 1378
BssECI	CCNNGG	6 cut(s)	303, 684, 757, 993, 1110, 1489
BssMI	GATC	4 cut(s)	416, 652, 673, 1246
BssT1I	CCWWGG	2 cut(s)	303, 1110
Bst2UI	CCWGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
Bst4CI	ACNGT	8 cut(s)	11, 19, 290, 373, 446, 848, 957, 1227
Bst6I	CTCTTC	2 cut(s)	528, 692
BstAPI	GCANNNNNTGC	1 cut(s)	1514
BstC8I	GCNNGC	5 cut(s)	318, 730, 831, 1254, 1308
BstDEI	CTNAG	8 cut(s)	105, 626, 765, 921, 1138, 1242, 1257, 1599
BstDSI	CCRYGG	1 cut(s)	303
BstF5I	GGATG	2 cut(s)	157, 1225
BstKTI	GATC	4 cut(s)	419, 655, 676, 1249
BstMAI	GTCTC	3 cut(s)	8, 530, 694
BstMBI	GATC	4 cut(s)	416, 652, 673, 1246
BstMCI	CGRYCG	1 cut(s)	1017
BstNI	CCWGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
BstNSI	RCATGY	3 cut(s)	833, 1025, 1256
BstSCI	CCNGG	7 cut(s)	166, 515, 684, 757, 802, 992, 1489
BstSFI	CTRYAG	2 cut(s)	144, 1545
BstV1I	GCAGC	8 cut(s)	71, 307, 712, 757, 853, 1433, 1531, 1549
BstV2I	GAAGAC	1 cut(s)	800
BstX2I	RGATCY	2 cut(s)	416, 652
BstYI	RGATCY	2 cut(s)	416, 652
BsuI	GTATCC	1 cut(s)	418
BsuRI	GGCC	3 cut(s)	890, 1052, 1453
BtgI	CCRYGG	1 cut(s)	303
BtsCI	GGATG	2 cut(s)	157, 1225
BtsI	GCAGTG	1 cut(s)	1554
BtsIMutI	CAGTG	4 cut(s)	16, 295, 1421, 1554
BveI	ACCTGC	2 cut(s)	1381, 1549
Cac8I	GCNNGC	5 cut(s)	318, 730, 831, 1254, 1308
Cfr13I	GGNCC	2 cut(s)	1051, 1485
CsiI	ACCWGGT	1 cut(s)	802
Csp6I	GTAC	2 cut(s)	785, 1538
CspCI	CAANNNNNGTGG	2 cut(s)	1397, 1432
CviAII	CATG	8 cut(s)	208, 296, 304, 409, 830, 838, 1022, 1253
CviQI	GTAC	2 cut(s)	785, 1538
DdeI	CTNAG	8 cut(s)	105, 626, 765, 921, 1138, 1242, 1257, 1599
DpnI	GATC	4 cut(s)	418, 654, 675, 1248
DpnII	GATC	4 cut(s)	416, 652, 673, 1246
EaeI	YGGCCR	1 cut(s)	1451
Eam1104I	CTCTTC	2 cut(s)	528, 692
EarI	CTCTTC	2 cut(s)	528, 692
Eco130I	CCWWGG	2 cut(s)	303, 1110
Eco32I	GATATC	1 cut(s)	754
Eco47I	GGWCC	1 cut(s)	1485
Eco57I	CTGAAG	3 cut(s)	384, 1272, 1332
Eco88I	CYCGRG	1 cut(s)	1046
EcoO109I	RGGNCCY	1 cut(s)	1051
EcoRII	CCWGG	7 cut(s)	166, 515, 684, 757, 802, 992, 1489
EcoRV	GATATC	1 cut(s)	754
EcoT14I	CCWWGG	2 cut(s)	303, 1110
EcoT22I	ATGCAT	2 cut(s)	184, 1519
ErhI	CCWWGG	2 cut(s)	303, 1110
FaeI	CATG	8 cut(s)	211, 299, 307, 412, 833, 841, 1025, 1256
FaqI	GGGAC	1 cut(s)	1488
FatI	CATG	8 cut(s)	207, 295, 303, 408, 829, 837, 1021, 1252
FauI	CCCGC	1 cut(s)	1591
FauNDI	CATATG	2 cut(s)	235, 1519
Fnu4HI	GCNGC	8 cut(s)	60, 321, 726, 771, 867, 1422, 1545, 1563
FokI	GGATG	2 cut(s)	144, 1232
Fsp4HI	GCNGC	8 cut(s)	60, 321, 726, 771, 867, 1422, 1545, 1563
FspBI	CTAG	2 cut(s)	639, 812
GluI	GCNGC	8 cut(s)	60, 321, 726, 771, 867, 1422, 1545, 1563
HaeIII	GGCC	3 cut(s)	890, 1052, 1453
Hin1II	CATG	8 cut(s)	211, 299, 307, 412, 833, 841, 1025, 1256
HindIII	AAGCTT	1 cut(s)	1446
HinfI	GANTC	9 cut(s)	86, 200, 215, 332, 613, 712, 1067, 1106, 1130
HphI	GGTGA	4 cut(s)	182, 707, 792, 1362
Hpy166II	GTNNAC	2 cut(s)	293, 442
Hpy188I	TCNGA	8 cut(s)	85, 199, 403, 793, 924, 1141, 1291, 1330
Hpy188III	TCNNGA	7 cut(s)	107, 422, 602, 671, 812, 1007, 1234
Hpy8I	GTNNAC	2 cut(s)	293, 442
HpyAV	CCTTC	3 cut(s)	538, 1231, 1377
HpyCH4III	ACNGT	8 cut(s)	11, 19, 290, 373, 446, 848, 957, 1227
HpyF3I	CTNAG	8 cut(s)	105, 626, 765, 921, 1138, 1242, 1257, 1599
Hsp92II	CATG	8 cut(s)	211, 299, 307, 412, 833, 841, 1025, 1256
Kzo9I	GATC	4 cut(s)	416, 652, 673, 1246
LmnI	GCTCC	5 cut(s)	136, 145, 913, 1278, 1391
Lsp1109I	GCAGC	8 cut(s)	71, 307, 712, 757, 853, 1433, 1531, 1549
LweI	GCATC	7 cut(s)	139, 256, 317, 385, 566, 1197, 1210
MabI	ACCWGGT	1 cut(s)	802
MaeI	CTAG	2 cut(s)	639, 812
MalI	GATC	4 cut(s)	418, 654, 675, 1248
MboI	GATC	4 cut(s)	416, 652, 673, 1246
MboII	GAAGA	7 cut(s)	476, 479, 545, 709, 800, 1317, 1325
MfeI	CAATTG	1 cut(s)	1028
MflI	RGATCY	2 cut(s)	416, 652
MhlI	GDGCHC	2 cut(s)	766, 1283
MlsI	TGGCCA	1 cut(s)	1453
MluNI	TGGCCA	1 cut(s)	1453
MlyI	GAGTC	2 cut(s)	1076, 1139
MmeI	TCCRAC	2 cut(s)	364, 1158
MnlI	CCTC	9 cut(s)	103, 144, 232, 547, 1042, 1055, 1168, 1237, 1452
Mox20I	TGGCCA	1 cut(s)	1453
Mph1103I	ATGCAT	2 cut(s)	184, 1519
MroXI	GAANNNNTTC	1 cut(s)	373
MscI	TGGCCA	1 cut(s)	1453
MseI	TTAA	3 cut(s)	510, 527, 825
MslI	CAYNNNNRTG	1 cut(s)	225
Msp20I	TGGCCA	1 cut(s)	1453
MspA1I	CMGCKG	2 cut(s)	251, 1424
MspR9I	CCNGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
MunI	CAATTG	1 cut(s)	1028
Mva1269I	GAATGC	3 cut(s)	916, 985, 1040
MvaI	CCWGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
NcoI	CCATGG	1 cut(s)	303
NdeI	CATATG	2 cut(s)	235, 1519
NdeII	GATC	4 cut(s)	416, 652, 673, 1246
NlaIII	CATG	8 cut(s)	211, 299, 307, 412, 833, 841, 1025, 1256
NlaIV	GGNNCC	1 cut(s)	1487
NsiI	ATGCAT	2 cut(s)	184, 1519
NspI	RCATGY	3 cut(s)	833, 1025, 1256
PaeI	GCATGC	2 cut(s)	833, 1256
PaeR7I	CTCGAG	1 cut(s)	1046
PaqCI	CACCTGC	1 cut(s)	1381
PcsI	WCGNNNNNNNCGW	1 cut(s)	1076
PctI	GAATGC	3 cut(s)	916, 985, 1040
PdmI	GAANNNNTTC	1 cut(s)	373
PfeI	GAWTC	7 cut(s)	86, 200, 215, 332, 613, 712, 1106
PflMI	CCANNNNNTGG	2 cut(s)	167, 254
PkrI	GCNGC	8 cut(s)	61, 322, 727, 772, 868, 1423, 1546, 1564
PleI	GAGTC	2 cut(s)	1075, 1138
PpsI	GAGTC	2 cut(s)	1075, 1138
Psp6I	CCWGG	7 cut(s)	166, 515, 684, 757, 802, 992, 1489
PspGI	CCWGG	7 cut(s)	166, 515, 684, 757, 802, 992, 1489
PspN4I	GGNNCC	1 cut(s)	1487
PspPI	GGNCC	2 cut(s)	1051, 1485
PspXI	VCTCGAGB	1 cut(s)	1046
PstI	CTGCAG	1 cut(s)	1549
PsuI	RGATCY	2 cut(s)	416, 652
PvuII	CAGCTG	2 cut(s)	251, 1424
RsaI	GTAC	2 cut(s)	786, 1539
RsaNI	GTAC	2 cut(s)	785, 1538
RseI	CAYNNNNRTG	1 cut(s)	225
SaqAI	TTAA	3 cut(s)	510, 527, 825
SatI	GCNGC	8 cut(s)	60, 321, 726, 771, 867, 1422, 1545, 1563
Sau3AI	GATC	4 cut(s)	416, 652, 673, 1246
Sau96I	GGNCC	2 cut(s)	1051, 1485
SchI	GAGTC	2 cut(s)	1076, 1139
ScrFI	CCNGG	7 cut(s)	168, 517, 686, 759, 804, 994, 1491
SduI	GDGCHC	2 cut(s)	766, 1283
SexAI	ACCWGGT	1 cut(s)	802
SfaNI	GCATC	7 cut(s)	139, 256, 317, 385, 566, 1197, 1210
SfcI	CTRYAG	2 cut(s)	144, 1545
Sfr274I	CTCGAG	1 cut(s)	1046
SinI	GGWCC	1 cut(s)	1485
SlaI	CTCGAG	1 cut(s)	1046
SmiMI	CAYNNNNRTG	1 cut(s)	225
SmlI	CTYRAG	2 cut(s)	1046, 1443
SmoI	CTYRAG	2 cut(s)	1046, 1443
SphI	GCATGC	2 cut(s)	833, 1256
SsiI	CCGC	2 cut(s)	1013, 1584
SspI	AATATT	1 cut(s)	100
SspMI	CTAG	2 cut(s)	639, 812
StyD4I	CCNGG	7 cut(s)	166, 515, 684, 757, 802, 992, 1489
StyI	CCWWGG	2 cut(s)	303, 1110
TaaI	ACNGT	8 cut(s)	11, 19, 290, 373, 446, 848, 957, 1227
TaqI	TCGA	4 cut(s)	1017, 1047, 1065, 1070
TfiI	GAWTC	7 cut(s)	86, 200, 215, 332, 613, 712, 1106
Tru1I	TTAA	3 cut(s)	510, 527, 825
Tru9I	TTAA	3 cut(s)	510, 527, 825
TscAI	CASTG	4 cut(s)	16, 295, 1421, 1554
TseI	GCWGC	8 cut(s)	59, 320, 725, 770, 866, 1421, 1544, 1562
TspDTI	ATGAA	5 cut(s)	42, 312, 366, 585, 1262
TspRI	CASTG	4 cut(s)	16, 295, 1421, 1554
Van91I	CCANNNNNTGG	2 cut(s)	167, 254
VpaK11BI	GGWCC	1 cut(s)	1485
XapI	RAATTY	2 cut(s)	123, 795
XbaI	TCTAGA	1 cut(s)	811
XceI	RCATGY	3 cut(s)	833, 1025, 1256
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XhoI	CTCGAG	1 cut(s)	1046
XmnI	GAANNNNTTC	1 cut(s)	373
XspI	CTAG	2 cut(s)	639, 812
Zsp2I	ATGCAT	2 cut(s)	184, 1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.