Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0001738

Physical Location & Seq

Genomic Coordinates Reverse (-)

19854823 .. 19857994

Gene Structure 3172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g24291.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGTCCATCCATCTCTTCCTCTCACTCCTCCTCGCCTTAATACTATCCCCAATCCCATCTCTTTCCCAGCAAAACGACACCGTCCCATGCCCGCTCAACTTCACCATCCTGGAGCAGTTCGCCGACTCCAACCGCCCCCAAGTCGACAGCAAGATCGAGTGCCAGTACATCCTCCAAGGCCTCCGCCTCGTCGACTCCAACTACCTCCAGCTCACCGGCAACTTCCTCCCCCCGCTCAACGCCGCCTCCTCCTGCTGGTCCGCCTACCAAACCCTCGCCGAAAAATTCGTCGCCGGCTTCGACATTCGCGCCTCCTGCGGCTTCCAGACCTCATGGATCTCCCAGGGCTGCATGAACATCACCACCAAGGACCAATTCGAAGCCCTCGTCGGCCAATCCGCCCTAAACGACGTCGTTTCCAACTGCAACCAGTCCCTCGAGAACAACTCCCCCTGCGCCTCCTGCACCACCAGCCTTGGAGGCCTCTCCGCCACCTATCTCACCGGCGAATCCATCGGGAACGTCTCCGGATGTACCGCCTACCCCTCGATTTACGCCGCGGCCTTCGCTAATCCCTACGGCCCTGCCGATCACGGCAACGCTAAGTGCTTATTCCAGCTGGATTTCGCGGCGGCGAGCCCCGGTAAGAAGAAACGGACTCTGATTTTGATTGTGTTGGTTGCCTGTGGTTTCGGGTTGTTGGTTTTGATCGGCGGGATTTGGTTCTCGTGGCACAAGTATGAAGAGTATATGATGAAGAAAAGGAGAAAGGATGCTAATGATAAGATTGAGCTGGGGTTGGGTAATGCATTGGAGTCCATTAGTGGGAGTACTACTTTGGTTAAGTTCACATTCGAAGAGATTAGTAAGGCTACTAAGAATTTCGCTAGGGAGAATATAATAGGGAGAGGAGGATATGGGAATGTGTATAAAGGTACATTGTCTGACGGTTCTGAAGTTGCGTTGAAGAGGTTTAAGAATTGCTCTGCTGCCGGGGATGCGAATTTCGCTCATGAGGTTGAGGTGATTGCGAGCGTTAGGCATGTGAATCTTGTGGCTTTGAGAGGTTATTGTACTGCGACGACGCATTTGGTGGGGCACCAGAGGATCATCGTGTGTGATTTGATGAAGAATGGGAGTCTGCATGACCATTTGTTTGGGACTTTTGAGAATAAGCTTAGTTGGCCGATTAGGCAGAGGATTGCGCTAGGGACTGCGAGGGGGTTGGCTTATTTGCATGATGGGGCTCAGCCGTCTATCATTCATAGGGATATTAAAGCAAATAACATACTTTTGGATGAGGATTTTGAGGCCAAAGTGGCGGATTTTGGACTTGCAAAGTTTACGCCTGAGGGAATGACGCATTTGAGCACTAGGGTGGCTGGAACGATGGGTTATCTTGCTCCGGAGTATGCATTGTATGGGCAGTTGACGGAGAAAAGTGATGTTTATAGCTTTGGTGTTGTGATGCTTGAGCTTTTGAGTGGAAAGAAAGCACTCCATGTGAATAATGAGAGCCAGCCGTCACTTGTGACAGATTGGGCATGGACCTTGGTGCGAGAAGGAAAAACACTGGATGTTGTTGAAGATATGCCAGAGAAGGGTCCGTCTGAAGTTTTAGAGAAGTATGTGTTGGTTTCTGTTCTTTGTTCACATCCACAGTTGTATGCTAGGCCAACAATGGATCAGGTTGTAAAAATGTTGGAGACAGACTTGGTAGTTCCCTCGATCCCAGAAAGACCAATTCCTCTTGTGGCCGAGATTGATGATATAGAAAGATACAGCAGCAGTGGCTCAATTCAGCTCTCTAGTACAGTCGGCTTCCAGACTTATACATTTGAAAGTAGCCTTCCTCGTGACCATAAGGGAGATGGAGAAAGTTCAACTTCAACAACAGATGGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

636

Amino Acids

69.34

Weight (kDa)

5.72

Isoelectric Point (pI)

41.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	25 - 178	1.2e-37	SPARK
Pkinase	PF00069	296 - 566	1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	298 - 567	9.4e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48010
fragaria_vesca	FvH4_2g24291 FvH4_2g24291 FvH4_6g05000 FvH4_6g05020
malus_domestica	MD03G1272600.v1.1 MD04G1211500.v1.1 MD11G1293500.v1.1 MD12G1226500.v1.1
prunus_persica	Prupe.6G332100_v2.0.a1 Prupe.6G332200_v2.0.a1 Prupe.8G248800_v2.0.a1
pyrus_communis	pycom03g21710 pycom11g25970
rosa_chinensis	RchiOBHm_Chr3g0453511 RchiOBHm_Chr3g0453521 RchiOBHm_Chr5g0002211 RchiOBHm_Chr6g0292151
rosa_laevigata	RLG00000012057 RLG00000025506 RLG00000025507 RLG00000031008
rosa_multiflora	Rmu_co8460761.1_g000001 Rmu_sc0000510.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073750 Rroxscaffold_2G00125960 Rroxscaffold_6G00430490 Rroxscaffold_7G00175400
rosa_rugosa	Rorug02G0649700 Rorug02G0649800 Rorug06G0223800
rosa_samantha	Rh1BG359400 Rh3AG052600 Rh3AG052700 Rh3BG054100 Rh3BG054200 Rh3CG053400 Rh3CG053500 Rh3DG054200 Rh3DG054300 Rh6AG337200 Rh6BG344400 Rh6CG351200 Rh6DG337400 Rh7BG191800
rosa_wichuraiana	Rw3G004050 Rw3G004060 Rw6G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	414
AccB1I	GGYRCC	1 cut(s)	1098
AccBSI	CCGCTC	2 cut(s)	94, 235
AccI	GTMKAC	2 cut(s)	144, 192
AccII	CGCG	3 cut(s)	309, 560, 629
AccIII	TCCGGA	2 cut(s)	527, 1405
AclWI	GGATC	4 cut(s)	344, 1115, 1692, 1723
AcoI	YGGCCR	3 cut(s)	391, 1184, 1755
AcsI	RAATTY	3 cut(s)	284, 880, 1003
AcuI	CTGAAG	2 cut(s)	975, 1632
AcyI	GRCGYC	1 cut(s)	411
AfaI	GTAC	6 cut(s)	167, 535, 832, 937, 1075, 1813
AfiI	CCNNNNNNNGG	3 cut(s)	255, 825, 1601
AgsI	TTSAA	5 cut(s)	967, 1586, 1841, 1884, 1890
AjnI	CCWGG	2 cut(s)	108, 342
AjuI	GAANNNNNNNTTGG	4 cut(s)	359, 391, 1616, 1648
AleI	CACNNNNGTG	1 cut(s)	1376
AluBI	AGCT	7 cut(s)	211, 619, 793, 1177, 1455, 1477, 1804
AluI	AGCT	7 cut(s)	211, 619, 793, 1177, 1455, 1477, 1804
Alw21I	GWGCWC	1 cut(s)	1373
Alw26I	GTCTC	2 cut(s)	529, 1700
AlwI	GGATC	4 cut(s)	344, 1115, 1692, 1723
Ama87I	CYCGRG	1 cut(s)	437
Aor13HI	TCCGGA	2 cut(s)	527, 1405
AoxI	GGCC	9 cut(s)	178, 391, 481, 561, 580, 1184, 1311, 1673, 1755
ApeKI	GCWGC	3 cut(s)	348, 989, 1785
ApoI	RAATTY	3 cut(s)	284, 880, 1003
AspLEI	GCGC	3 cut(s)	311, 458, 1207
AspS9I	GGNCC	5 cut(s)	258, 370, 581, 1548, 1604
AsuC2I	CCSGG	2 cut(s)	642, 994
AsuHPI	GGTGA	5 cut(s)	94, 205, 352, 493, 1036
AsuII	TTCGAA	2 cut(s)	378, 855
AvaI	CYCGRG	1 cut(s)	437
AvaII	GGWCC	4 cut(s)	258, 370, 1548, 1604
AxyI	CCTNAGG	1 cut(s)	1350
BaeGI	GKGCMC	1 cut(s)	1101
BanI	GGYRCC	1 cut(s)	1098
BanII	GRGCYC	2 cut(s)	641, 1249
BauI	CACGAG	2 cut(s)	727, 1854
Bbv12I	GWGCWC	1 cut(s)	1373
BbvI	GCAGC	3 cut(s)	335, 976, 1797
BccI	CCATC	9 cut(s)	14, 18, 64, 113, 521, 1235, 1384, 1865, 1892
BceAI	ACGGC	4 cut(s)	595, 610, 1237, 1507
BciT130I	CCWGG	2 cut(s)	110, 344
BcnI	CCSGG	2 cut(s)	642, 994
BcoDI	GTCTC	2 cut(s)	529, 1700
BfaI	CTAG	5 cut(s)	888, 1208, 1374, 1671, 1809
BglI	GCCNNNNNGGC	3 cut(s)	480, 1192, 1319
BisI	GCNGC	9 cut(s)	243, 319, 349, 558, 561, 630, 633, 990, 1786
BlpI	GCTNAGC	1 cut(s)	1248
BlsI	GCNGC	9 cut(s)	244, 320, 350, 559, 562, 631, 634, 991, 1787
BmcAI	AGTACT	1 cut(s)	832
Bme1390I	CCNGG	4 cut(s)	110, 344, 642, 994
Bme18I	GGWCC	4 cut(s)	258, 370, 1548, 1604
BmeT110I	CYCGRG	1 cut(s)	437
BmgT120I	GGNCC	5 cut(s)	258, 370, 581, 1548, 1604
BmiI	GGNNCC	2 cut(s)	1100, 1605
BmrFI	CCNGG	4 cut(s)	110, 344, 642, 994
BmsI	GCATC	3 cut(s)	763, 988, 1458
BplI	GAGNNNNNCTC	2 cut(s)	431, 463
BpmI	CTGGAG	2 cut(s)	131, 191
Bpu1102I	GCTNAGC	1 cut(s)	1248
Bpu14I	TTCGAA	2 cut(s)	378, 855
BpuEI	CTTGAG	1 cut(s)	1493
BpuMI	CCSGG	2 cut(s)	642, 994
BsaHI	GRCGYC	1 cut(s)	411
BsaJI	CCNNGG	9 cut(s)	175, 342, 343, 366, 475, 558, 640, 993, 1551
BsaWI	WCCGGW	2 cut(s)	527, 1405
BsaXI	ACNNNNNCTCC	2 cut(s)	230, 260
Bsc4I	CCNNNNNNNGG	3 cut(s)	255, 825, 1601
Bse118I	RCCGGY	3 cut(s)	215, 293, 503
Bse1I	ACTGG	3 cut(s)	163, 430, 1578
Bse21I	CCTNAGG	1 cut(s)	1350
BseAI	TCCGGA	2 cut(s)	527, 1405
BseBI	CCWGG	2 cut(s)	110, 344
BseDI	CCNNGG	9 cut(s)	175, 342, 343, 366, 475, 558, 640, 993, 1551
BseGI	GGATG	9 cut(s)	6, 105, 168, 536, 778, 1003, 1303, 1582, 1654
BseLI	CCNNNNNNNGG	3 cut(s)	255, 825, 1601
BseMII	CTCAG	2 cut(s)	1262, 1341
BseNI	ACTGG	3 cut(s)	163, 430, 1578
BseRI	GAGGAG	4 cut(s)	17, 20, 238, 924
BseSI	GKGCMC	1 cut(s)	1101
BseXI	GCAGC	3 cut(s)	335, 976, 1797
BseYI	CCCAGC	2 cut(s)	66, 793
BsgI	GTGCAG	1 cut(s)	448
Bsh1236I	CGCG	3 cut(s)	309, 560, 629
BshFI	GGCC	9 cut(s)	180, 393, 483, 563, 582, 1186, 1313, 1675, 1757
BshNI	GGYRCC	1 cut(s)	1098
BsiHKAI	GWGCWC	1 cut(s)	1373
BsiHKCI	CYCGRG	1 cut(s)	437
BsiSI	CCGG	7 cut(s)	216, 294, 504, 528, 642, 993, 1406
BslFI	GGGAC	4 cut(s)	68, 418, 1174, 1225
BslI	CCNNNNNNNGG	3 cut(s)	255, 825, 1601
BsmAI	GTCTC	2 cut(s)	529, 1700
BsmBI	CGTCTC	1 cut(s)	529
BsmFI	GGGAC	4 cut(s)	68, 418, 1174, 1225
BsnI	GGCC	9 cut(s)	180, 393, 483, 563, 582, 1186, 1313, 1675, 1757
BsoBI	CYCGRG	1 cut(s)	437
Bsp119I	TTCGAA	2 cut(s)	378, 855
Bsp1286I	GDGCHC	4 cut(s)	641, 1101, 1249, 1373
Bsp13I	TCCGGA	2 cut(s)	527, 1405
Bsp143I	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
Bsp1720I	GCTNAGC	1 cut(s)	1248
BspANI	GGCC	9 cut(s)	180, 393, 483, 563, 582, 1186, 1313, 1675, 1757
BspCNI	CTCAG	2 cut(s)	1261, 1342
BspEI	TCCGGA	2 cut(s)	527, 1405
BspFNI	CGCG	3 cut(s)	309, 560, 629
BspHI	TCATGA	1 cut(s)	1012
BspLI	GGNNCC	2 cut(s)	1100, 1605
BspPI	GGATC	4 cut(s)	344, 1115, 1692, 1723
BspT104I	TTCGAA	2 cut(s)	378, 855
BspT107I	GGYRCC	1 cut(s)	1098
BsrBI	CCGCTC	2 cut(s)	94, 235
BsrFI	RCCGGY	3 cut(s)	215, 293, 503
BsrI	ACTGG	3 cut(s)	163, 430, 1578
BssAI	RCCGGY	3 cut(s)	215, 293, 503
BssECI	CCNNGG	9 cut(s)	175, 342, 343, 366, 475, 558, 640, 993, 1551
BssMI	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
BssNI	GRCGYC	1 cut(s)	411
BssSI	CACGAG	2 cut(s)	727, 1854
BssT1I	CCWWGG	4 cut(s)	175, 366, 475, 1551
Bst2BI	CACGAG	2 cut(s)	727, 1854
Bst2UI	CCWGG	2 cut(s)	110, 344
Bst4CI	ACNGT	4 cut(s)	82, 950, 1662, 1816
Bst6I	CTCTTC	4 cut(s)	20, 738, 852, 962
BstACI	GRCGYC	1 cut(s)	411
BstBI	TTCGAA	2 cut(s)	378, 855
BstC8I	GCNNGC	5 cut(s)	92, 295, 637, 1033, 1520
BstDEI	CTNAG	5 cut(s)	603, 876, 1178, 1248, 1350
BstDSI	CCRYGG	1 cut(s)	558
BstF5I	GGATG	9 cut(s)	6, 105, 168, 536, 778, 1003, 1303, 1582, 1654
BstFNI	CGCG	3 cut(s)	309, 560, 629
BstHHI	GCGC	3 cut(s)	311, 458, 1207
BstKTI	GATC	7 cut(s)	156, 339, 592, 711, 1110, 1687, 1731
BstMAI	GTCTC	2 cut(s)	529, 1700
BstMBI	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
BstNI	CCWGG	2 cut(s)	110, 344
BstNSI	RCATGY	1 cut(s)	1046
BstSCI	CCNGG	4 cut(s)	108, 342, 640, 992
BstSLI	GKGCMC	1 cut(s)	1101
BstUI	CGCG	3 cut(s)	309, 560, 629
BstV1I	GCAGC	3 cut(s)	335, 976, 1797
BstX2I	RGATCY	1 cut(s)	336
BstXI	CCANNNNNNTGG	1 cut(s)	1157
BstYI	RGATCY	1 cut(s)	336
Bsu36I	CCTNAGG	1 cut(s)	1350
BsuRI	GGCC	9 cut(s)	180, 393, 483, 563, 582, 1186, 1313, 1675, 1757
BtgI	CCRYGG	1 cut(s)	558
BtsCI	GGATG	9 cut(s)	6, 105, 168, 536, 778, 1003, 1303, 1582, 1654
BtsI	GCAGTG	1 cut(s)	1795
BtsIMutI	CAGTG	2 cut(s)	1571, 1795
Cac8I	GCNNGC	5 cut(s)	92, 295, 637, 1033, 1520
CciI	TCATGA	1 cut(s)	1012
CfoI	GCGC	3 cut(s)	311, 458, 1207
Cfr10I	RCCGGY	3 cut(s)	215, 293, 503
Cfr13I	GGNCC	5 cut(s)	258, 370, 581, 1548, 1604
Cfr42I	CCGCGG	1 cut(s)	561
CseI	GACGC	2 cut(s)	1093, 1369
Csp6I	GTAC	6 cut(s)	166, 534, 831, 936, 1074, 1812
CspCI	CAANNNNNGTGG	2 cut(s)	457, 492
CviAII	CATG	9 cut(s)	87, 333, 352, 1013, 1043, 1145, 1238, 1502, 1545
CviQI	GTAC	6 cut(s)	166, 534, 831, 936, 1074, 1812
DdeI	CTNAG	5 cut(s)	603, 876, 1178, 1248, 1350
DpnI	GATC	7 cut(s)	155, 338, 591, 710, 1109, 1686, 1730
DpnII	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
EaeI	YGGCCR	3 cut(s)	391, 1184, 1755
Eam1104I	CTCTTC	4 cut(s)	20, 738, 852, 962
EarI	CTCTTC	4 cut(s)	20, 738, 852, 962
EciI	GGCGGA	5 cut(s)	173, 250, 388, 478, 1337
Eco130I	CCWWGG	4 cut(s)	175, 366, 475, 1551
Eco147I	AGGCCT	2 cut(s)	180, 483
Eco24I	GRGCYC	2 cut(s)	641, 1249
Eco47I	GGWCC	4 cut(s)	258, 370, 1548, 1604
Eco57I	CTGAAG	2 cut(s)	975, 1632
Eco81I	CCTNAGG	1 cut(s)	1350
Eco88I	CYCGRG	1 cut(s)	437
EcoRII	CCWGG	2 cut(s)	108, 342
EcoT14I	CCWWGG	4 cut(s)	175, 366, 475, 1551
EcoT22I	ATGCAT	2 cut(s)	811, 1417
EcoT38I	GRGCYC	2 cut(s)	641, 1249
ErhI	CCWWGG	4 cut(s)	175, 366, 475, 1551
Esp3I	CGTCTC	1 cut(s)	529
FaeI	CATG	9 cut(s)	90, 336, 355, 1016, 1046, 1148, 1241, 1505, 1548
FalI	AAGNNNNNCTT	2 cut(s)	1870, 1902
FaqI	GGGAC	4 cut(s)	68, 418, 1174, 1225
FatI	CATG	9 cut(s)	86, 332, 351, 1012, 1042, 1144, 1237, 1501, 1544
FauI	CCCGC	3 cut(s)	99, 240, 707
FblI	GTMKAC	2 cut(s)	144, 192
Fnu4HI	GCNGC	9 cut(s)	243, 319, 349, 558, 561, 630, 633, 990, 1786
FokI	GGATG	8 cut(s)	92, 155, 543, 785, 1010, 1310, 1589, 1641
FriOI	GRGCYC	2 cut(s)	641, 1249
Fsp4HI	GCNGC	9 cut(s)	243, 319, 349, 558, 561, 630, 633, 990, 1786
FspBI	CTAG	5 cut(s)	888, 1208, 1374, 1671, 1809
GlaI	GCGC	3 cut(s)	310, 457, 1206
GluI	GCNGC	9 cut(s)	243, 319, 349, 558, 561, 630, 633, 990, 1786
GsaI	CCCAGC	2 cut(s)	70, 797
GsuI	CTGGAG	2 cut(s)	131, 191
HaeIII	GGCC	9 cut(s)	180, 393, 483, 563, 582, 1186, 1313, 1675, 1757
HapII	CCGG	7 cut(s)	216, 294, 504, 528, 642, 993, 1406
HgaI	GACGC	2 cut(s)	1093, 1369
HhaI	GCGC	3 cut(s)	311, 458, 1207
Hin1I	GRCGYC	1 cut(s)	411
Hin1II	CATG	9 cut(s)	90, 336, 355, 1016, 1046, 1148, 1241, 1505, 1548
Hin6I	GCGC	3 cut(s)	309, 456, 1205
HinP1I	GCGC	3 cut(s)	309, 456, 1205
HincII	GTYRAC	3 cut(s)	145, 193, 1431
HindII	GTYRAC	3 cut(s)	145, 193, 1431
HindIII	AAGCTT	1 cut(s)	1175
HinfI	GANTC	7 cut(s)	125, 194, 509, 658, 815, 1048, 1138
HpaII	CCGG	7 cut(s)	216, 294, 504, 528, 642, 993, 1406
HphI	GGTGA	5 cut(s)	94, 205, 352, 493, 1036
Hpy166II	GTNNAC	6 cut(s)	145, 193, 849, 1344, 1431, 1652
Hpy188I	TCNGA	4 cut(s)	663, 946, 955, 1612
Hpy188III	TCNNGA	8 cut(s)	325, 439, 517, 528, 1013, 1406, 1825, 1856
Hpy8I	GTNNAC	6 cut(s)	145, 193, 849, 1344, 1431, 1652
Hpy99I	CGWCG	7 cut(s)	194, 293, 392, 413, 416, 1084, 1087
HpyAV	CCTTC	4 cut(s)	574, 1556, 1594, 1859
HpyCH4III	ACNGT	4 cut(s)	82, 950, 1662, 1816
HpyCH4IV	ACGT	2 cut(s)	411, 522
HpyCH4V	TGCA	8 cut(s)	351, 426, 465, 809, 1144, 1237, 1337, 1415
HpyF3I	CTNAG	5 cut(s)	603, 876, 1178, 1248, 1350
HpySE526I	ACGT	2 cut(s)	411, 522
Hsp92I	GRCGYC	1 cut(s)	411
Hsp92II	CATG	9 cut(s)	90, 336, 355, 1016, 1046, 1148, 1241, 1505, 1548
HspAI	GCGC	3 cut(s)	309, 456, 1205
Kpn2I	TCCGGA	2 cut(s)	527, 1405
KroI	GCCGGC	1 cut(s)	293
KroNI	GCCGGC	1 cut(s)	295
KspI	CCGCGG	1 cut(s)	561
Kzo9I	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
LmnI	GCTCC	2 cut(s)	112, 1408
Lsp1109I	GCAGC	3 cut(s)	335, 976, 1797
LweI	GCATC	3 cut(s)	763, 988, 1458
MaeI	CTAG	5 cut(s)	888, 1208, 1374, 1671, 1809
MaeII	ACGT	2 cut(s)	411, 522
MaeIII	GTNAC	3 cut(s)	1524, 1531, 1856
MalI	GATC	7 cut(s)	155, 338, 591, 710, 1109, 1686, 1730
MbiI	CCGCTC	2 cut(s)	94, 235
MboI	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
MboII	GAAGA	8 cut(s)	7, 661, 755, 769, 869, 979, 1141, 1598
MflI	RGATCY	1 cut(s)	336
MhlI	GDGCHC	4 cut(s)	641, 1101, 1249, 1373
MluCI	AATT	7 cut(s)	284, 374, 880, 979, 1003, 1743, 1797
MlyI	GAGTC	5 cut(s)	119, 188, 652, 824, 1147
MmeI	TCCRAC	4 cut(s)	153, 222, 444, 1683
Mph1103I	ATGCAT	2 cut(s)	811, 1417
MroI	TCCGGA	2 cut(s)	527, 1405
MroNI	GCCGGC	1 cut(s)	293
MseI	TTAA	4 cut(s)	38, 843, 975, 1275
MslI	CAYNNNNRTG	2 cut(s)	738, 1376
MspA1I	CMGCKG	2 cut(s)	560, 619
MspI	CCGG	7 cut(s)	216, 294, 504, 528, 642, 993, 1406
MspR9I	CCNGG	4 cut(s)	110, 344, 642, 994
MvaI	CCWGG	2 cut(s)	110, 344
MvnI	CGCG	3 cut(s)	309, 560, 629
NaeI	GCCGGC	1 cut(s)	295
NciI	CCSGG	2 cut(s)	642, 994
NdeII	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
NgoMIV	GCCGGC	1 cut(s)	293
NlaIII	CATG	9 cut(s)	90, 336, 355, 1016, 1046, 1148, 1241, 1505, 1548
NlaIV	GGNNCC	2 cut(s)	1100, 1605
NmeAIII	GCCGAG	1 cut(s)	1783
NmuCI	GTSAC	3 cut(s)	1524, 1531, 1856
NsiI	ATGCAT	2 cut(s)	811, 1417
NspI	RCATGY	1 cut(s)	1046
NspV	TTCGAA	2 cut(s)	378, 855
OliI	CACNNNNGTG	1 cut(s)	1376
PaeR7I	CTCGAG	1 cut(s)	437
PagI	TCATGA	1 cut(s)	1012
PasI	CCCWGGG	1 cut(s)	343
PceI	AGGCCT	2 cut(s)	180, 483
PcsI	WCGNNNNNNNCGW	3 cut(s)	297, 384, 585
PdiI	GCCGGC	1 cut(s)	295
PfeI	GAWTC	2 cut(s)	509, 1048
PflFI	GACNNNGTC	1 cut(s)	80
PfoI	TCCNGGA	1 cut(s)	108
PkrI	GCNGC	9 cut(s)	244, 320, 350, 559, 562, 631, 634, 991, 1787
PleI	GAGTC	5 cut(s)	119, 188, 652, 823, 1146
PpsI	GAGTC	5 cut(s)	119, 188, 652, 823, 1146
Psp6I	CCWGG	2 cut(s)	108, 342
PspFI	CCCAGC	2 cut(s)	66, 793
PspGI	CCWGG	2 cut(s)	108, 342
PspN4I	GGNNCC	2 cut(s)	1100, 1605
PspPI	GGNCC	5 cut(s)	258, 370, 581, 1548, 1604
PsuI	RGATCY	1 cut(s)	336
PsyI	GACNNNGTC	1 cut(s)	80
PvuII	CAGCTG	1 cut(s)	619
RsaI	GTAC	6 cut(s)	167, 535, 832, 937, 1075, 1813
RsaNI	GTAC	6 cut(s)	166, 534, 831, 936, 1074, 1812
RseI	CAYNNNNRTG	2 cut(s)	738, 1376
SacII	CCGCGG	1 cut(s)	561
SalI	GTCGAC	2 cut(s)	143, 191
SaqAI	TTAA	4 cut(s)	38, 843, 975, 1275
SatI	GCNGC	9 cut(s)	243, 319, 349, 558, 561, 630, 633, 990, 1786
Sau3AI	GATC	7 cut(s)	153, 336, 589, 708, 1107, 1684, 1728
Sau96I	GGNCC	5 cut(s)	258, 370, 581, 1548, 1604
ScaI	AGTACT	1 cut(s)	832
SchI	GAGTC	5 cut(s)	119, 188, 652, 824, 1147
ScrFI	CCNGG	4 cut(s)	110, 344, 642, 994
SduI	GDGCHC	4 cut(s)	641, 1101, 1249, 1373
SfaNI	GCATC	3 cut(s)	763, 988, 1458
Sfr274I	CTCGAG	1 cut(s)	437
Sfr303I	CCGCGG	1 cut(s)	561
SfuI	TTCGAA	2 cut(s)	378, 855
SgrAI	CRCCGGYG	1 cut(s)	503
SgrBI	CCGCGG	1 cut(s)	561
SinI	GGWCC	4 cut(s)	258, 370, 1548, 1604
SlaI	CTCGAG	1 cut(s)	437
SmiMI	CAYNNNNRTG	2 cut(s)	738, 1376
SmlI	CTYRAG	2 cut(s)	437, 1472
SmoI	CTYRAG	2 cut(s)	437, 1472
Sse9I	AATT	7 cut(s)	284, 374, 880, 979, 1003, 1743, 1797
SseBI	AGGCCT	2 cut(s)	180, 483
SspMI	CTAG	5 cut(s)	888, 1208, 1374, 1671, 1809
StuI	AGGCCT	2 cut(s)	180, 483
StyD4I	CCNGG	4 cut(s)	108, 342, 640, 992
StyI	CCWWGG	4 cut(s)	175, 366, 475, 1551
TaaI	ACNGT	4 cut(s)	82, 950, 1662, 1816
TaiI	ACGT	2 cut(s)	414, 525
TaqI	TCGA	9 cut(s)	144, 156, 192, 300, 378, 438, 548, 855, 1727
TasI	AATT	7 cut(s)	284, 374, 880, 979, 1003, 1743, 1797
TatI	WGTACW	4 cut(s)	165, 830, 1073, 1811
TauI	GCSGC	6 cut(s)	245, 321, 560, 563, 632, 635
TfiI	GAWTC	2 cut(s)	509, 1048
Tru1I	TTAA	4 cut(s)	38, 843, 975, 1275
Tru9I	TTAA	4 cut(s)	38, 843, 975, 1275
TscAI	CASTG	2 cut(s)	1578, 1795
TseFI	GTSAC	3 cut(s)	1524, 1531, 1856
TseI	GCWGC	3 cut(s)	348, 989, 1785
Tsp45I	GTSAC	3 cut(s)	1524, 1531, 1856
TspDTI	ATGAA	5 cut(s)	368, 756, 770, 1142, 1253
TspGWI	ACGGA	3 cut(s)	670, 1448, 1596
TspRI	CASTG	2 cut(s)	1578, 1795
Tth111I	GACNNNGTC	1 cut(s)	80
VpaK11BI	GGWCC	4 cut(s)	258, 370, 1548, 1604
XapI	RAATTY	3 cut(s)	284, 880, 1003
XceI	RCATGY	1 cut(s)	1046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1868
XhoI	CTCGAG	1 cut(s)	437
XmiI	GTMKAC	2 cut(s)	144, 192
XspI	CTAG	5 cut(s)	888, 1208, 1374, 1671, 1809
ZraI	GACGTC	1 cut(s)	412
ZrmI	AGTACT	1 cut(s)	832
Zsp2I	ATGCAT	2 cut(s)	811, 1417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.