Rorug02G0649800
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000401
Physical Location & Seq
Reverse (-)
75853933 .. 75859972
6040 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0649800.1

Sequence Viewer

Length: 2118 bp
ATGGCCTCCAACGCACTCTCTCTCCTCCCCTCCATTTTCCGACACGAACCGACGTCTTCACCATTACTGTCCACAAGGTCGTCCAAGCTGGCTAGGAGGACCACCAGATTGGCCATTTCCACAGACCAAACTCCAGTCTTCACGACGTCAACGGCGACTGCTTTATCAGAGTCAGACAAGTCCAAGTCCAAGGAAGAGCACTTGGCTCTGGAGGACGACGGTGGTGATCAAGCATCGGAAGAGCGTGCGAGCTTAAACCAGTTCTTTGAGCAAGCCAAGGGTCTTCTCAGATCGGACGACCAGTACGGCACTGGAACTGGACCACCTCGCTGGTTCTCGCCTATAGACTGCGGGAGCGGGATCCCCTCCAACCATGATTCCCCTCTCCTTCTCTTTTTGCCTGGAATTGATGGCACCGGACTTGGCCTTGTAAGGCATCATCAGAAACTTGGAAAGATTTTTGAGGTCTCGTGCTTGCATATCCCTCCTAAGGATCGAACACCGTTTACAGACTTAGTGAGGCTGGTTGAGAGAACAATTCGTTCAGAGCATGATGCCTCACCCGATCGTCCCATATATCTTGTTGGAGAATCTCTTGGAGCATGCCTTGCACTATCTGTGGCAGCCCTTAACCCGGATATCGACCTTGAGCTTATTTTAGCAAATCCAGCAACATCCTTCAGCAAGTCACCACTTCAAGCTCTATTACCTTTACTGCAGTTCATGCCTGACTCTCCCAATCTTAGCCTTCCTCATATACTGAGTACAATTACAGGTGCAATGGTGGCTAGTCTGGAGAAGGGAGTTGGAGGACTTCCACTGCCACAGACAGTTGGAAAGCTATCACGGGATATTATTGAACCATCAATATCTAACCTTTCTGTTCTTGCTGATATCTTACCCAGAGAAACACTTCTCTGGAAGCTACAAATGATCAGTACAGCTTCTTCATATGCCAATTCACGCCTCCATGCTGTAAAAGCTCATACTGTGATAGTATCCAGTGGAAGAGATCCATTGCTACCTAGTCAAGAGGAAGGTCAAAGACTCAAAAGCCTGCTTGCAACTTGTCAGGTCCGTACATTTGAAGACTGCGGCCATTTCCTCTTCTTGGAAGATGCTTTTGATTTGCTAACTGTCATCAAGAATGTTGGTATCTATCGTCGTTCTAAAGAACGAGACTTTGTTTCAGATTACATACCACCATCACCTTCCGAAGTTAAAGGCATAATGGAAAAAAACAGATGGTTTAACATAATCATGAGCCCAGTGATGCACTCAACTTTAGCAGACGGGAAGATAGTGAGGGGCTTTGCCGGGATTCCTACAGAGGGTCCTGTATTGTATGTTGGTTATCACATGTTACTGGGATTTGAAATAGTTCCCTTGGTGACGCAACTGTTCGAACAAAAAAACGTCCATCTGCGAGGGATAGCACATCCAATGATGTTTCTCAAAATGAAAAATGGAAGTTTACCTGAGTTAACATTATACGATGATTTCAGACTTATGGGCGCTGTTCCTGTCTCGGGAAAAAACTTTTTCAAACTTCTCTCTACAAAGTCTCATGTCCTACTCTATCCAGGTGGAGTGCGTGAGGCTCTTCACCGGAAGGGGGAAGCATATAAGTTGTTCTGGCCGGAACGGTCAGAATTTGTGAGGATGGCAGCTAGATTTGGAGCCAAAATCGTACCTTTTGGTGCTGTTGGAGAAGATGATATTGGTGATCTACTTCTCGATTATGAAGACCAGATGAAAATTCCTTTCCTTAGGAAATCTATAGAGGACTTAACGGCTGAAGCTGCAAAAGTGAGGTCCACCGTTGATGGGGAGATTGGAAACCAAGCTATGCACCTTCCAGGAATTGTACCGAAATTTCCTGGCCGGTTTTATTATAAATTTGGGAAACCAATTGAAACAGCAGGGAGGAAGCAGGAATTACGAGACAGGGAGAAAGCTCATGAACTATATTTGGAAGTAAAATCGGAGGTTGAGAAGTCCCTTGCTTATTTGCAGAAAAAAAGAGAAAGTGATCCTTACAGAAACCTCGCGGCTCGGTTACAATACCAGGCCATACACGGGTTTACGTCTGAAGTTCCTTCATTTGACCTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

705

Amino Acids

78.14

Weight (kDa)

6.72

Isoelectric Point (pI)

47.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_6 PF12697 162 - 376 5.8e-09 Alpha/beta hydrolase family
Abhydrolase_1 PF00561 163 - 373 4.5e-09 alpha/beta hydrolase fold
Hydrolase_4 PF12146 170 - 372 1.3e-07 Serine aminopeptidase, S33
DAGAT PF03982 502 - 576 7.5e-09 Diacylglycerol acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000401)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08920 AT1G08920 AT1G08920 AT3G05160 AT3G05160 AT3G05160 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT5G27350 AT5G27360 AT5G27360 AT5G27360 AT5G27360 AT5G27360
fragaria_vesca FvH4_6g05021 FvH4_6g05050 FvH4_6g05051 FvH4_6g05051 FvH4_6g05060 FvH4_6g05061 FvH4_6g05090 FvH4_6g05090 FvH4_6g05090 FvH4_6g05111 FvH4_6g05111 FvH4_6g05120
malus_domestica MD12G1225600.v1.1 MD12G1225900.v1.1 MD12G1226400.v1.1
pyrus_communis pycom12g21050 pycom12g21080
rosa_chinensis RchiOBHm_Chr3g0453541 RchiOBHm_Chr3g0453551 RchiOBHm_Chr3g0453561 RchiOBHm_Chr3g0453571 RchiOBHm_Chr3g0453591 RchiOBHm_Chr3g0453601 RchiOBHm_Chr3g0453621 RchiOBHm_Chr3g0453651
rosa_laevigata RLG00000025501 RLG00000025504 RLG00000025505
rosa_multiflora Rmu_co8451765.1_g000001 Rmu_sc0000510.1_g000021 Rmu_sc0000510.1_g000022 Rmu_sc0000510.1_g000023 Rmu_sc0000510.1_g000027 Rmu_sc0003556.1_g000001 Rmu_sc0003556.1_g000003
rosa_roxburghii Rroxscaffold_5G00359890 Rroxscaffold_5G00359900 Rroxscaffold_6G00430520 Rroxscaffold_6G00430530 Rroxscaffold_6G00430540 Rroxscaffold_6G00430550 Rroxscaffold_6G00430570
rosa_rugosa Rorug02G0649800 Rorug02G0649900 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650100 Rorug02G0650200 Rorug02G0650300 Rorug02G0650400 Rorug02G0650500 Rorug04G0138300
rosa_samantha Rh3AG052800 Rh3AG052900 Rh3AG053000 Rh3AG053100 Rh3AG053200 Rh3AG053400 Rh3BG054300 Rh3BG054400 Rh3BG054500 Rh3BG054600 Rh3BG054700 Rh3BG054900 Rh3CG053600 Rh3CG053700 Rh3CG053800 Rh3CG053900 Rh3CG054100 Rh3DG054400 Rh3DG054500 Rh3DG054700 Rh3DG054800 Rh3DG055000 Rh3DG055200 Rh4DG197900
rosa_wichuraiana Rw3G004070 Rw3G004080 Rw3G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1896
AatII GACGTC 2 cut(s) 56, 149
AccB1I GGYRCC 1 cut(s) 413
AccBSI CCGCTC 1 cut(s) 357
AccII CGCG 1 cut(s) 2051
AciI CCGC 4 cut(s) 351, 357, 1095, 2051
AclWI GGATC 5 cut(s) 355, 368, 501, 1007, 2027
AcoI YGGCCR 4 cut(s) 111, 1096, 1637, 1882
AcsI RAATTY 4 cut(s) 1652, 1758, 1874, 1898
AcuI CTGAAG 3 cut(s) 664, 1818, 2112
AcyI GRCGYC 2 cut(s) 53, 146
AfaI GTAC 6 cut(s) 305, 766, 940, 1081, 1692, 1869
AfiI CCNNNNNNNGG 8 cut(s) 490, 634, 1111, 1331, 1529, 1615, 1827, 2079
AflIII ACRYGT 1 cut(s) 1359
AgsI TTSAA 6 cut(s) 698, 860, 1088, 1376, 1546, 1916
AjnI CCWGG 5 cut(s) 400, 1582, 1858, 1879, 2067
AjuI GAANNNNNNNTTGG 2 cut(s) 1704, 1736
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 5 cut(s) 472, 1173, 1531, 1569, 1938
AlwI GGATC 5 cut(s) 355, 368, 501, 1007, 2027
Ama87I CYCGRG 1 cut(s) 1528
AoxI GGCC 7 cut(s) 3, 111, 424, 1096, 1637, 1882, 2070
ApeKI GCWGC 3 cut(s) 623, 1667, 1802
ApoI RAATTY 4 cut(s) 1652, 1758, 1874, 1898
ArsI GACNNNNNNTTYG 2 cut(s) 1799, 1831
Asp700I GAANNNNTTC 2 cut(s) 912, 1380
AspLEI GCGC 1 cut(s) 1517
AspS9I GGNCC 5 cut(s) 99, 320, 1075, 1334, 1815
AsuC2I CCSGG 2 cut(s) 635, 1318
AsuHPI GGTGA 8 cut(s) 51, 236, 552, 681, 1200, 1402, 1598, 1736
AsuII TTCGAA 1 cut(s) 1404
AvaI CYCGRG 1 cut(s) 1528
AvaII GGWCC 5 cut(s) 99, 320, 1075, 1334, 1815
AxyI CCTNAGG 2 cut(s) 489, 1769
BalI TGGCCA 1 cut(s) 113
BamHI GGATCC 1 cut(s) 360
BanI GGYRCC 1 cut(s) 413
BanII GRGCYC 1 cut(s) 1268
BarI GAAGNNNNNNTAC 2 cut(s) 931, 963
BauI CACGAG 1 cut(s) 469
BbsI GAAGAC 5 cut(s) 48, 130, 275, 1095, 1752
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 3 cut(s) 635, 1679, 1789
BccI CCATC 7 cut(s) 404, 871, 1213, 1239, 1428, 1657, 1820
BceAI ACGGC 3 cut(s) 168, 322, 1809
BciT130I CCWGG 5 cut(s) 402, 1584, 1860, 1881, 2069
BciVI GTATCC 1 cut(s) 1009
BclI TGATCA 2 cut(s) 226, 933
BcnI CCSGG 2 cut(s) 635, 1318
BcoDI GTCTC 5 cut(s) 472, 1173, 1531, 1569, 1938
BfaI CTAG 4 cut(s) 93, 789, 1026, 1671
BfmI CTRYAG 4 cut(s) 342, 716, 1326, 1779
BfoI RGCGCY 1 cut(s) 1518
BfuI GTATCC 1 cut(s) 1009
BisI GCNGC 5 cut(s) 624, 1096, 1668, 1803, 2052
BlsI GCNGC 5 cut(s) 625, 1097, 1669, 1804, 2053
Bme1390I CCNGG 7 cut(s) 402, 635, 1318, 1584, 1860, 1881, 2069
Bme18I GGWCC 5 cut(s) 99, 320, 1075, 1334, 1815
BmeT110I CYCGRG 1 cut(s) 1528
BmgT120I GGNCC 5 cut(s) 99, 320, 1075, 1334, 1815
BmiI GGNNCC 4 cut(s) 362, 415, 1335, 1681
BmrFI CCNGG 7 cut(s) 402, 635, 1318, 1584, 1860, 1881, 2069
BmrI ACTGGG 2 cut(s) 1262, 1376
BmsI GCATC 5 cut(s) 242, 445, 544, 1108, 1263
BmuI ACTGGG 2 cut(s) 1262, 1376
BpiI GAAGAC 5 cut(s) 48, 130, 275, 1095, 1752
BpmI CTGGAG 3 cut(s) 117, 230, 815
Bpu14I TTCGAA 1 cut(s) 1404
BpuEI CTTGAG 1 cut(s) 668
BpuMI CCSGG 2 cut(s) 635, 1318
BsaHI GRCGYC 2 cut(s) 53, 146
BsaI GGTCTC 1 cut(s) 472
BsaJI CCNNGG 3 cut(s) 189, 276, 1386
BsaWI WCCGGW 2 cut(s) 416, 1608
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 8 cut(s) 490, 634, 1111, 1331, 1529, 1615, 1827, 2079
Bse118I RCCGGY 1 cut(s) 1884
Bse1I ACTGG 8 cut(s) 134, 259, 301, 316, 322, 1002, 1268, 1371
Bse21I CCTNAGG 2 cut(s) 489, 1769
Bse3DI GCAATG 2 cut(s) 786, 1016
BseBI CCWGG 5 cut(s) 402, 1584, 1860, 1881, 2069
BseDI CCNNGG 3 cut(s) 189, 276, 1386
BseGI GGATG 3 cut(s) 674, 1438, 1668
BseLI CCNNNNNNNGG 8 cut(s) 490, 634, 1111, 1331, 1529, 1615, 1827, 2079
BseMI GCAATG 2 cut(s) 786, 1016
BseMII CTCAG 3 cut(s) 301, 752, 1470
BseNI ACTGG 8 cut(s) 134, 259, 301, 316, 322, 1002, 1268, 1371
BseRI GAGGAG 1 cut(s) 14
BseXI GCAGC 3 cut(s) 635, 1679, 1789
Bsh1236I CGCG 1 cut(s) 2051
Bsh1285I CGRYCG 1 cut(s) 568
BshFI GGCC 7 cut(s) 5, 113, 426, 1098, 1639, 1884, 2072
BshNI GGYRCC 1 cut(s) 413
BsiEI CGRYCG 1 cut(s) 568
BsiHKAI GWGCWC 1 cut(s) 201
BsiHKCI CYCGRG 1 cut(s) 1528
BsiSI CCGG 6 cut(s) 417, 635, 1317, 1609, 1640, 1885
BslFI GGGAC 2 cut(s) 555, 1984
BslI CCNNNNNNNGG 8 cut(s) 490, 634, 1111, 1331, 1529, 1615, 1827, 2079
BsmAI GTCTC 5 cut(s) 472, 1173, 1531, 1569, 1938
BsmFI GGGAC 2 cut(s) 555, 1984
BsnI GGCC 7 cut(s) 5, 113, 426, 1098, 1639, 1884, 2072
Bso31I GGTCTC 1 cut(s) 472
BsoBI CYCGRG 1 cut(s) 1528
Bsp119I TTCGAA 1 cut(s) 1404
Bsp1286I GDGCHC 2 cut(s) 201, 1268
Bsp143I GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
BspACI CCGC 4 cut(s) 351, 357, 1095, 2051
BspANI GGCC 7 cut(s) 5, 113, 426, 1098, 1639, 1884, 2072
BspCNI CTCAG 3 cut(s) 300, 753, 1471
BspFNI CGCG 1 cut(s) 2051
BspHI TCATGA 2 cut(s) 1260, 1960
BspLI GGNNCC 4 cut(s) 362, 415, 1335, 1681
BspMAI CTGCAG 1 cut(s) 720
BspPI GGATC 5 cut(s) 355, 368, 501, 1007, 2027
BspQI GCTCTTC 3 cut(s) 189, 234, 1608
BspT104I TTCGAA 1 cut(s) 1404
BspT107I GGYRCC 1 cut(s) 413
BspTNI GGTCTC 1 cut(s) 472
BsrBI CCGCTC 1 cut(s) 357
BsrDI GCAATG 2 cut(s) 786, 1016
BsrFI RCCGGY 1 cut(s) 1884
BsrI ACTGG 8 cut(s) 134, 259, 301, 316, 322, 1002, 1268, 1371
BssAI RCCGGY 1 cut(s) 1884
BssECI CCNNGG 3 cut(s) 189, 276, 1386
BssMI GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
BssNI GRCGYC 2 cut(s) 53, 146
BssSI CACGAG 1 cut(s) 469
BssT1I CCWWGG 3 cut(s) 189, 276, 1386
Bst2BI CACGAG 1 cut(s) 469
Bst2UI CCWGG 5 cut(s) 402, 1584, 1860, 1881, 2069
Bst4CI ACNGT 9 cut(s) 69, 221, 504, 832, 991, 1138, 1401, 1647, 1822
Bst6I CTCTTC 5 cut(s) 189, 234, 1003, 1112, 1608
BstACI GRCGYC 2 cut(s) 53, 146
BstAPI GCANNNNNTGC 2 cut(s) 608, 724
BstBI TTCGAA 1 cut(s) 1404
BstC8I GCNNGC 8 cut(s) 90, 246, 250, 273, 476, 604, 1058, 1062
BstDEI CTNAG 7 cut(s) 287, 489, 514, 743, 761, 1479, 1769
BstF5I GGATG 3 cut(s) 674, 1438, 1668
BstFNI CGCG 1 cut(s) 2051
BstH2I RGCGCY 1 cut(s) 1518
BstHHI GCGC 1 cut(s) 1517
BstKTI GATC 9 cut(s) 229, 293, 363, 496, 568, 936, 1015, 1729, 2035
BstMAI GTCTC 5 cut(s) 472, 1173, 1531, 1569, 1938
BstMBI GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
BstMCI CGRYCG 1 cut(s) 568
BstMWI GCNNNNNNNGC 7 cut(s) 11, 608, 668, 724, 785, 980, 1802
BstNI CCWGG 5 cut(s) 402, 1584, 1860, 1881, 2069
BstNSI RCATGY 2 cut(s) 606, 1363
BstSCI CCNGG 7 cut(s) 400, 633, 1316, 1582, 1858, 1879, 2067
BstSFI CTRYAG 4 cut(s) 342, 716, 1326, 1779
BstUI CGCG 1 cut(s) 2051
BstV1I GCAGC 3 cut(s) 635, 1679, 1789
BstV2I GAAGAC 5 cut(s) 48, 130, 275, 1095, 1752
BstX2I RGATCY 2 cut(s) 360, 1012
BstXI CCANNNNNNTGG 2 cut(s) 109, 330
BstYI RGATCY 2 cut(s) 360, 1012
Bsu36I CCTNAGG 2 cut(s) 489, 1769
BsuI GTATCC 1 cut(s) 1009
BsuRI GGCC 7 cut(s) 5, 113, 426, 1098, 1639, 1884, 2072
BtsCI GGATG 3 cut(s) 674, 1438, 1668
BtsI GCAGTG 1 cut(s) 818
BtsIMutI CAGTG 4 cut(s) 309, 818, 1009, 1275
Cac8I GCNNGC 8 cut(s) 90, 246, 250, 273, 476, 604, 1058, 1062
CciI TCATGA 2 cut(s) 1260, 1960
CfoI GCGC 1 cut(s) 1517
Cfr10I RCCGGY 1 cut(s) 1884
Cfr13I GGNCC 5 cut(s) 99, 320, 1075, 1334, 1815
CseI GACGC 1 cut(s) 1402
Csp6I GTAC 6 cut(s) 304, 765, 939, 1080, 1691, 1868
CviAII CATG 9 cut(s) 374, 551, 603, 724, 971, 1261, 1360, 1568, 1961
CviQI GTAC 6 cut(s) 304, 765, 939, 1080, 1691, 1868
DdeI CTNAG 7 cut(s) 287, 489, 514, 743, 761, 1479, 1769
DpnI GATC 9 cut(s) 228, 292, 362, 495, 567, 935, 1014, 1728, 2034
DpnII GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
EaeI YGGCCR 4 cut(s) 111, 1096, 1637, 1882
Eam1104I CTCTTC 5 cut(s) 189, 234, 1003, 1112, 1608
EarI CTCTTC 5 cut(s) 189, 234, 1003, 1112, 1608
Eco130I CCWWGG 3 cut(s) 189, 276, 1386
Eco24I GRGCYC 1 cut(s) 1268
Eco31I GGTCTC 1 cut(s) 472
Eco32I GATATC 2 cut(s) 640, 895
Eco47I GGWCC 5 cut(s) 99, 320, 1075, 1334, 1815
Eco57I CTGAAG 3 cut(s) 664, 1818, 2112
Eco81I CCTNAGG 2 cut(s) 489, 1769
Eco88I CYCGRG 1 cut(s) 1528
EcoO109I RGGNCCY 1 cut(s) 1334
EcoRII CCWGG 5 cut(s) 400, 1582, 1858, 1879, 2067
EcoRV GATATC 2 cut(s) 640, 895
EcoT14I CCWWGG 3 cut(s) 189, 276, 1386
EcoT38I GRGCYC 1 cut(s) 1268
ErhI CCWWGG 3 cut(s) 189, 276, 1386
FaeI CATG 9 cut(s) 377, 554, 606, 727, 974, 1264, 1363, 1571, 1964
FalI AAGNNNNNCTT 2 cut(s) 2020, 2052
FaqI GGGAC 2 cut(s) 555, 1984
FatI CATG 9 cut(s) 373, 550, 602, 723, 970, 1260, 1359, 1567, 1960
FauI CCCGC 2 cut(s) 344, 350
FauNDI CATATG 1 cut(s) 952
FbaI TGATCA 2 cut(s) 226, 933
Fnu4HI GCNGC 5 cut(s) 624, 1096, 1668, 1803, 2052
FokI GGATG 3 cut(s) 661, 1425, 1675
FriOI GRGCYC 1 cut(s) 1268
Fsp4HI GCNGC 5 cut(s) 624, 1096, 1668, 1803, 2052
FspBI CTAG 4 cut(s) 93, 789, 1026, 1671
GlaI GCGC 1 cut(s) 1516
GluI GCNGC 5 cut(s) 624, 1096, 1668, 1803, 2052
GsuI CTGGAG 3 cut(s) 117, 230, 815
HaeII RGCGCY 1 cut(s) 1518
HaeIII GGCC 7 cut(s) 5, 113, 426, 1098, 1639, 1884, 2072
HapII CCGG 6 cut(s) 417, 635, 1317, 1609, 1640, 1885
HgaI GACGC 1 cut(s) 1402
HhaI GCGC 1 cut(s) 1517
Hin1I GRCGYC 2 cut(s) 53, 146
Hin1II CATG 9 cut(s) 377, 554, 606, 727, 974, 1264, 1363, 1571, 1964
Hin6I GCGC 1 cut(s) 1515
HinP1I GCGC 1 cut(s) 1515
HincII GTYRAC 2 cut(s) 150, 1485
HindII GTYRAC 2 cut(s) 150, 1485
HinfI GANTC 6 cut(s) 170, 377, 590, 731, 1047, 1321
HpaI GTTAAC 1 cut(s) 1485
HpaII CCGG 6 cut(s) 417, 635, 1317, 1609, 1640, 1885
HphI GGTGA 8 cut(s) 51, 236, 552, 681, 1200, 1402, 1598, 1736
Hpy166II GTNNAC 7 cut(s) 72, 150, 507, 1475, 1485, 1818, 2085
Hpy8I GTNNAC 7 cut(s) 72, 150, 507, 1475, 1485, 1818, 2085
Hpy99I CGWCG 4 cut(s) 55, 148, 221, 1167
HpyAV CCTTC 9 cut(s) 398, 688, 758, 793, 1031, 1221, 1606, 1865, 2109
HpyCH4III ACNGT 9 cut(s) 69, 221, 504, 832, 991, 1138, 1401, 1647, 1822
HpyCH4IV ACGT 4 cut(s) 53, 146, 1416, 2087
HpyCH4V TGCA 9 cut(s) 478, 611, 718, 779, 1064, 1276, 1805, 1852, 2014
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 608, 668, 724, 785, 980, 1802
HpyF3I CTNAG 7 cut(s) 287, 489, 514, 743, 761, 1479, 1769
HpySE526I ACGT 4 cut(s) 53, 146, 1416, 2087
Hsp92I GRCGYC 2 cut(s) 53, 146
Hsp92II CATG 9 cut(s) 377, 554, 606, 727, 974, 1264, 1363, 1571, 1964
HspAI GCGC 1 cut(s) 1515
Ksp22I TGATCA 2 cut(s) 226, 933
KspAI GTTAAC 1 cut(s) 1485
Kzo9I GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
LguI GCTCTTC 3 cut(s) 189, 234, 1608
LmnI GCTCC 3 cut(s) 354, 599, 1679
Lsp1109I GCAGC 3 cut(s) 635, 1679, 1789
LweI GCATC 5 cut(s) 242, 445, 544, 1108, 1263
MaeI CTAG 4 cut(s) 93, 789, 1026, 1671
MaeII ACGT 4 cut(s) 53, 146, 1416, 2087
MaeIII GTNAC 4 cut(s) 687, 1362, 1390, 2058
MalI GATC 9 cut(s) 228, 292, 362, 495, 567, 935, 1014, 1728, 2034
MbiI CCGCTC 1 cut(s) 357
MboI GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
MfeI CAATTG 1 cut(s) 1911
MflI RGATCY 2 cut(s) 360, 1012
MhlI GDGCHC 2 cut(s) 201, 1268
MlsI TGGCCA 1 cut(s) 113
MluNI TGGCCA 1 cut(s) 113
MlyI GAGTC 3 cut(s) 179, 725, 1041
MmeI TCCRAC 7 cut(s) 33, 64, 393, 565, 787, 814, 1687
Mox20I TGGCCA 1 cut(s) 113
MroXI GAANNNNTTC 2 cut(s) 912, 1380
MscI TGGCCA 1 cut(s) 113
MseI TTAA 7 cut(s) 254, 630, 1221, 1251, 1484, 1790, 2116
MslI CAYNNNNRTG 1 cut(s) 1259
Msp20I TGGCCA 1 cut(s) 113
MspI CCGG 6 cut(s) 417, 635, 1317, 1609, 1640, 1885
MspR9I CCNGG 7 cut(s) 402, 635, 1318, 1584, 1860, 1881, 2069
MunI CAATTG 1 cut(s) 1911
MvaI CCWGG 5 cut(s) 402, 1584, 1860, 1881, 2069
MvnI CGCG 1 cut(s) 2051
MwoI GCNNNNNNNGC 7 cut(s) 11, 608, 668, 724, 785, 980, 1802
NciI CCSGG 2 cut(s) 635, 1318
NdeI CATATG 1 cut(s) 952
NdeII GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
NlaIII CATG 9 cut(s) 377, 554, 606, 727, 974, 1264, 1363, 1571, 1964
NlaIV GGNNCC 4 cut(s) 362, 415, 1335, 1681
NmuCI GTSAC 2 cut(s) 687, 1390
NspI RCATGY 2 cut(s) 606, 1363
NspV TTCGAA 1 cut(s) 1404
PaeI GCATGC 1 cut(s) 606
PagI TCATGA 2 cut(s) 1260, 1960
PciI ACATGT 1 cut(s) 1359
PciSI GCTCTTC 3 cut(s) 189, 234, 1608
PcsI WCGNNNNNNNCGW 1 cut(s) 152
PdmI GAANNNNTTC 2 cut(s) 912, 1380
PfeI GAWTC 3 cut(s) 377, 590, 1321
PfoI TCCNGGA 1 cut(s) 1858
PkrI GCNGC 5 cut(s) 625, 1097, 1669, 1804, 2053
Ple19I CGATCG 1 cut(s) 568
PleI GAGTC 3 cut(s) 178, 725, 1041
PpsI GAGTC 3 cut(s) 178, 725, 1041
PpuMI RGGWCCY 1 cut(s) 1334
PscI ACATGT 1 cut(s) 1359
PsiI TTATAA 1 cut(s) 1896
Psp5II RGGWCCY 1 cut(s) 1334
Psp6I CCWGG 5 cut(s) 400, 1582, 1858, 1879, 2067
PspGI CCWGG 5 cut(s) 400, 1582, 1858, 1879, 2067
PspN4I GGNNCC 4 cut(s) 362, 415, 1335, 1681
PspPI GGNCC 5 cut(s) 99, 320, 1075, 1334, 1815
PspPPI RGGWCCY 1 cut(s) 1334
PsrI GAACNNNNNNTAC 2 cut(s) 490, 522
PstI CTGCAG 1 cut(s) 720
PsuI RGATCY 2 cut(s) 360, 1012
PvuI CGATCG 1 cut(s) 568
RsaI GTAC 6 cut(s) 305, 766, 940, 1081, 1692, 1869
RsaNI GTAC 6 cut(s) 304, 765, 939, 1080, 1691, 1868
RseI CAYNNNNRTG 1 cut(s) 1259
SapI GCTCTTC 3 cut(s) 189, 234, 1608
SaqAI TTAA 7 cut(s) 254, 630, 1221, 1251, 1484, 1790, 2116
SatI GCNGC 5 cut(s) 624, 1096, 1668, 1803, 2052
Sau3AI GATC 9 cut(s) 226, 290, 360, 493, 565, 933, 1012, 1726, 2032
Sau96I GGNCC 5 cut(s) 99, 320, 1075, 1334, 1815
SchI GAGTC 3 cut(s) 179, 725, 1041
ScrFI CCNGG 7 cut(s) 402, 635, 1318, 1584, 1860, 1881, 2069
SduI GDGCHC 2 cut(s) 201, 1268
SfaNI GCATC 5 cut(s) 242, 445, 544, 1108, 1263
SfcI CTRYAG 4 cut(s) 342, 716, 1326, 1779
SfuI TTCGAA 1 cut(s) 1404
SinI GGWCC 5 cut(s) 99, 320, 1075, 1334, 1815
SmiMI CAYNNNNRTG 1 cut(s) 1259
SmlI CTYRAG 1 cut(s) 647
SmoI CTYRAG 1 cut(s) 647
SphI GCATGC 1 cut(s) 606
SsiI CCGC 4 cut(s) 351, 357, 1095, 2051
SspMI CTAG 4 cut(s) 93, 789, 1026, 1671
StyD4I CCNGG 7 cut(s) 400, 633, 1316, 1582, 1858, 1879, 2067
StyI CCWWGG 3 cut(s) 189, 276, 1386
TaaI ACNGT 9 cut(s) 69, 221, 504, 832, 991, 1138, 1401, 1647, 1822
TaiI ACGT 4 cut(s) 56, 149, 1419, 2090
TaqI TCGA 4 cut(s) 496, 642, 1404, 1737
TatI WGTACW 2 cut(s) 764, 938
TauI GCSGC 2 cut(s) 1098, 2054
TfiI GAWTC 3 cut(s) 377, 590, 1321
Tru1I TTAA 7 cut(s) 254, 630, 1221, 1251, 1484, 1790, 2116
Tru9I TTAA 7 cut(s) 254, 630, 1221, 1251, 1484, 1790, 2116
TscAI CASTG 4 cut(s) 316, 825, 1009, 1275
TseFI GTSAC 2 cut(s) 687, 1390
TseI GCWGC 3 cut(s) 623, 1667, 1802
Tsp45I GTSAC 2 cut(s) 687, 1390
TspDTI ATGAA 7 cut(s) 712, 939, 1475, 1758, 1769, 1977, 2091
TspGWI ACGGA 1 cut(s) 1067
TspRI CASTG 4 cut(s) 316, 825, 1009, 1275
VpaK11BI GGWCC 5 cut(s) 99, 320, 1075, 1334, 1815
XapI RAATTY 4 cut(s) 1652, 1758, 1874, 1898
XceI RCATGY 2 cut(s) 606, 1363
XcmI CCANNNNNNNNNTGG 1 cut(s) 308
XmnI GAANNNNTTC 2 cut(s) 912, 1380
XspI CTAG 4 cut(s) 93, 789, 1026, 1671
ZraI GACGTC 2 cut(s) 54, 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.