Rh3BG054900
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
3751113 .. 3757250
6138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG054900.1

Sequence Viewer

Length: 1626 bp
ATGGACAGAGAAGCCATGGAAGAGGGGCTACTAGCTCTATCAGGGTCAAAGTCCAATATCAGTGGAGCTTCAGGTGTAGTGGTTCTGAGCACATTGGTCGCTCTCTGTGGTTCCTTCGGCTATGGCTGTGCTATAGGATACTCATCATCTGCTGAATCAGGAATTGTGGAAGACTTGGGCCTTACTTACTCAATTTTCGGTTCAACAATGACGATTGGAGGAATGATTGGTGCATTAGTAAATGGGACGATAACGGATCTCATTGGTCGTAGAGGTACAATGTGGTTTTCTGAAATATTCAGTGCTGCAGGGTGGCTCACTATAGCATTTGCACAGAATGCTTGGTGCCTGGATTTAGGACGGTTGTCAGTGGGATTTGGCGTCGGTATAACTTGCTACGTGGTACCTGTGTACATAGCAGAAATAACACCTACTGATCTTAGAGGAAGGTTTACTTCAGCTACTCAGTTGATGCTTTGTTGCGGTGTAGCACTAATATATTTCCTAGGAAATGTCATAACCTGGCGGACCTTGGCATTAGTCGGTGCTATTCCATCTCTTGTACACATAATAGGTCTATTTTTCATTCCAGAGTCTCCAAGGTGGCTGGCCAAGGTAGGTAGGCAAAAAGACTTTGAAGCGACTCTTCAGCGTCTTAGAGGAAAGAACACTGACACATCTCAAGAAGCAGCTGAAATCATGGATTATACAGAAATGTTTCAGCAGCACTCGGACAGAGTCCTGGACTTGTTCCAAAAGAGATATGCTCACTCACTCGTTATTGGAGTTGGGCTCATGTCACTGCAACAATTCGGGGGTACCAATGCAGTAGCATATTATGCAAGTTCTATATTTGTAGATGCAGGTTTTTCAAGTAGCATTGGGACTATATCATTGGCTATCATTGGGATACCTGGTGTTACATCGAGTGTGCTCTTAACAGACAAAGTCGGAAGACGACCACTTCTAATGGTTTCTGCTGGCGGATTGTGCTCGAGTGCCTTTCTTGTGGGTTTGGCATTCAGCTTTCAGGAACTCAACCTGTGGAAGGAGGTCACTCCCATTTTGGTGTACATTGGCTTGTTGGCTCAAAGTGTATCATACACAACAGGCATGGCAGGATTACCCTGGGTTATTATGTCAGAGATATTCCCTATAAACGTTAAGGGTTCAGCTGGAAGCCTGCTGAGTTTGGTGAACTGGTCTTGTGCTTGGATAGTAACAATCACCTTCAATTACATGATGGAATGGAGCTCAGCAGAGCGAAGACTAGGAAGTAAAGTCGGTGATTCTTCGTTTCGTTCGGCGGCAGCCGATGTCGGCGCTAGCTCTCGCTTTGCTAATGCTGTGTCACTCCTGGACGGGAAATGTTGTTCTACAACCCTTTTGACTTCTGAACTGCCATATCTGAGACTTGACGGTGGTGGGTTGCGCAGTTCGGGCTTTCCTTTCTATGACATGGCTGTCGTGTTCACTGTTATAAGGGAGGGAGTTAGCTTCGCGGTTTGGGTTCAAACCTTGGGTTCGGAATTTGATCTAGGAGACGGCGTCGGGGATGAGTCTTTGGAATGGACAGCTGGTGGCGTGAGGTGCAGGCGAAACCAAATTCAGCTGATTTGGGCCTGA

Protein Analysis

541

Amino Acids

57.92

Weight (kDa)

5.22

Isoelectric Point (pI)

36.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 35 - 400 1.6e-22 Major Facilitator Superfamily
Sugar_tr PF00083 59 - 418 4.5e-72 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000401)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08920 AT1G08920 AT1G08920 AT3G05160 AT3G05160 AT3G05160 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT5G27350 AT5G27360 AT5G27360 AT5G27360 AT5G27360 AT5G27360
fragaria_vesca FvH4_6g05021 FvH4_6g05050 FvH4_6g05051 FvH4_6g05051 FvH4_6g05060 FvH4_6g05061 FvH4_6g05090 FvH4_6g05090 FvH4_6g05090 FvH4_6g05111 FvH4_6g05111 FvH4_6g05120
malus_domestica MD12G1225600.v1.1 MD12G1225900.v1.1 MD12G1226400.v1.1
pyrus_communis pycom12g21050 pycom12g21080
rosa_chinensis RchiOBHm_Chr3g0453541 RchiOBHm_Chr3g0453551 RchiOBHm_Chr3g0453561 RchiOBHm_Chr3g0453571 RchiOBHm_Chr3g0453591 RchiOBHm_Chr3g0453601 RchiOBHm_Chr3g0453621 RchiOBHm_Chr3g0453651
rosa_laevigata RLG00000025501 RLG00000025504 RLG00000025505
rosa_multiflora Rmu_co8451765.1_g000001 Rmu_sc0000510.1_g000021 Rmu_sc0000510.1_g000022 Rmu_sc0000510.1_g000023 Rmu_sc0000510.1_g000027 Rmu_sc0003556.1_g000001 Rmu_sc0003556.1_g000003
rosa_roxburghii Rroxscaffold_5G00359890 Rroxscaffold_5G00359900 Rroxscaffold_6G00430520 Rroxscaffold_6G00430530 Rroxscaffold_6G00430540 Rroxscaffold_6G00430550 Rroxscaffold_6G00430570
rosa_rugosa Rorug02G0649800 Rorug02G0649900 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650100 Rorug02G0650200 Rorug02G0650300 Rorug02G0650400 Rorug02G0650500 Rorug04G0138300
rosa_samantha Rh3AG052800 Rh3AG052900 Rh3AG053000 Rh3AG053100 Rh3AG053200 Rh3AG053400 Rh3BG054300 Rh3BG054400 Rh3BG054500 Rh3BG054600 Rh3BG054700 Rh3BG054900 Rh3CG053600 Rh3CG053700 Rh3CG053800 Rh3CG053900 Rh3CG054100 Rh3DG054400 Rh3DG054500 Rh3DG054700 Rh3DG054800 Rh3DG055000 Rh3DG055200 Rh4DG197900
rosa_wichuraiana Rw3G004070 Rw3G004080 Rw3G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1481
AasI GACNNNNNNGTC 1 cut(s) 1463
Acc16I TGCGCA 1 cut(s) 1433
Acc36I ACCTGC 1 cut(s) 854
Acc65I GGTACC 2 cut(s) 403, 818
AccB1I GGYRCC 3 cut(s) 345, 403, 818
AccII CGCG 1 cut(s) 1502
AciI CCGC 5 cut(s) 483, 526, 984, 1307, 1502
AclI AACGTT 1 cut(s) 1161
AclWI GGATC 1 cut(s) 264
AcoI YGGCCR 1 cut(s) 609
AcsI RAATTY 2 cut(s) 1529, 1605
AcuI CTGAAG 3 cut(s) 54, 441, 632
AcyI GRCGYC 2 cut(s) 381, 1548
AfaI GTAC 6 cut(s) 277, 405, 413, 564, 820, 1073
AfiI CCNNNNNNNGG 1 cut(s) 1048
AgsI TTSAA 5 cut(s) 204, 638, 873, 1234, 1514
AjnI CCWGG 6 cut(s) 348, 521, 741, 913, 1127, 1356
AloI GAACNNNNNNTCC 2 cut(s) 1357, 1389
Alw21I GWGCWC 4 cut(s) 92, 936, 995, 1256
Alw26I GTCTC 3 cut(s) 600, 1405, 1536
AlwI GGATC 1 cut(s) 264
Ama87I CYCGRG 1 cut(s) 994
AoxI GGCC 3 cut(s) 178, 609, 1620
ApeKI GCWGC 4 cut(s) 305, 689, 724, 1310
ApoI RAATTY 2 cut(s) 1529, 1605
Asp700I GAANNNNTTC 1 cut(s) 717
Asp718I GGTACC 2 cut(s) 403, 818
AspA2I CCTAGG 1 cut(s) 505
AspLEI GCGC 2 cut(s) 1325, 1434
AspS9I GGNCC 3 cut(s) 178, 528, 1620
AsuHPI GGTGA 3 cut(s) 1207, 1219, 1298
AsuNHI GCTAGC 1 cut(s) 1325
AvaI CYCGRG 1 cut(s) 994
AvaII GGWCC 1 cut(s) 528
AvrII CCTAGG 1 cut(s) 505
BaeI ACNNNNGTAYC 2 cut(s) 395, 428
BalI TGGCCA 1 cut(s) 611
BanI GGYRCC 3 cut(s) 345, 403, 818
BanII GRGCYC 2 cut(s) 795, 1256
BarI GAAGNNNNNNTAC 2 cut(s) 12, 44
BbsI GAAGAC 3 cut(s) 177, 961, 1273
Bbv12I GWGCWC 4 cut(s) 92, 936, 995, 1256
BbvI GCAGC 4 cut(s) 292, 701, 736, 1322
BccI CCATC 2 cut(s) 562, 1237
BceAI ACGGC 1 cut(s) 1561
BcgI CGANNNNNNTGC 2 cut(s) 79, 113
BciT130I CCWGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
BciVI GTATCC 2 cut(s) 131, 903
BcoDI GTCTC 3 cut(s) 600, 1405, 1536
BfaI CTAG 5 cut(s) 32, 506, 1271, 1326, 1538
BfmI CTRYAG 3 cut(s) 132, 306, 321
BfoI RGCGCY 1 cut(s) 1326
BfuAI ACCTGC 1 cut(s) 854
BfuI GTATCC 2 cut(s) 131, 903
BisI GCNGC 5 cut(s) 306, 690, 725, 1308, 1311
BlnI CCTAGG 1 cut(s) 505
BlpI GCTNAGC 1 cut(s) 1255
BlsI GCNGC 5 cut(s) 307, 691, 726, 1309, 1312
Bme1390I CCNGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
Bme18I GGWCC 1 cut(s) 528
BmeT110I CYCGRG 1 cut(s) 994
BmgT120I GGNCC 3 cut(s) 178, 528, 1620
BmiI GGNNCC 4 cut(s) 112, 347, 405, 820
BmrFI CCNGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
BmsI GCATC 2 cut(s) 462, 850
BmtI GCTAGC 1 cut(s) 1329
BoxI GACNNNNGTC 1 cut(s) 364
BpiI GAAGAC 3 cut(s) 177, 961, 1273
BplI GAGNNNNNCTC 4 cut(s) 751, 783, 777, 809
Bpu1102I GCTNAGC 1 cut(s) 1255
BpuEI CTTGAG 1 cut(s) 666
BsaAI YACGTR 1 cut(s) 400
BsaBI GATNNNNATC 1 cut(s) 142
BsaHI GRCGYC 2 cut(s) 381, 1548
BsaJI CCNNGG 8 cut(s) 15, 505, 531, 599, 612, 1127, 1128, 1518
BsaXI ACNNNNNCTCC 2 cut(s) 1533, 1563
Bsc4I CCNNNNNNNGG 1 cut(s) 1048
Bse1I ACTGG 1 cut(s) 1205
Bse8I GATNNNNATC 1 cut(s) 142
BseBI CCWGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
BseDI CCNNGG 8 cut(s) 15, 505, 531, 599, 612, 1127, 1128, 1518
BseGI GGATG 1 cut(s) 1561
BseJI GATNNNNATC 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 1048
BseMII CTCAG 5 cut(s) 77, 479, 1178, 1269, 1400
BseNI ACTGG 1 cut(s) 1205
BseXI GCAGC 4 cut(s) 292, 701, 736, 1322
BsgI GTGCAG 1 cut(s) 1612
Bsh1236I CGCG 1 cut(s) 1502
BshFI GGCC 3 cut(s) 180, 611, 1622
BshNI GGYRCC 3 cut(s) 345, 403, 818
BsiHKAI GWGCWC 4 cut(s) 92, 936, 995, 1256
BsiHKCI CYCGRG 1 cut(s) 994
BslFI GGGAC 2 cut(s) 259, 898
BslI CCNNNNNNNGG 1 cut(s) 1048
BsmAI GTCTC 3 cut(s) 600, 1405, 1536
BsmBI CGTCTC 1 cut(s) 1536
BsmFI GGGAC 2 cut(s) 259, 898
BsmI GAATGC 2 cut(s) 343, 1019
BsnI GGCC 3 cut(s) 180, 611, 1622
BsoBI CYCGRG 1 cut(s) 994
Bsp1286I GDGCHC 5 cut(s) 92, 795, 936, 995, 1256
Bsp1407I TGTACA 3 cut(s) 411, 562, 1071
Bsp143I GATC 3 cut(s) 256, 436, 1534
Bsp1720I GCTNAGC 1 cut(s) 1255
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 5 cut(s) 483, 526, 984, 1307, 1502
BspANI GGCC 3 cut(s) 180, 611, 1622
BspCNI CTCAG 5 cut(s) 78, 478, 1179, 1268, 1401
BspFNI CGCG 1 cut(s) 1502
BspLI GGNNCC 4 cut(s) 112, 347, 405, 820
BspMAI CTGCAG 1 cut(s) 310
BspMI ACCTGC 1 cut(s) 854
BspOI GCTAGC 1 cut(s) 1329
BspPI GGATC 1 cut(s) 264
BspT107I GGYRCC 3 cut(s) 345, 403, 818
BsrGI TGTACA 3 cut(s) 411, 562, 1071
BsrI ACTGG 1 cut(s) 1205
BssECI CCNNGG 8 cut(s) 15, 505, 531, 599, 612, 1127, 1128, 1518
BssMI GATC 3 cut(s) 256, 436, 1534
BssNI GRCGYC 2 cut(s) 381, 1548
BssT1I CCWWGG 6 cut(s) 15, 505, 531, 599, 612, 1518
Bst2UI CCWGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
Bst4CI ACNGT 3 cut(s) 363, 1421, 1477
Bst6I CTCTTC 2 cut(s) 15, 651
BstACI GRCGYC 2 cut(s) 381, 1548
BstAPI GCANNNNNTGC 2 cut(s) 338, 839
BstAUI TGTACA 3 cut(s) 411, 562, 1071
BstBAI YACGTR 1 cut(s) 400
BstC8I GCNNGC 5 cut(s) 609, 982, 1184, 1327, 1595
BstDEI CTNAG 7 cut(s) 86, 440, 465, 656, 1187, 1255, 1409
BstDSI CCRYGG 1 cut(s) 15
BstENI CCTNNNNNAGG 1 cut(s) 1046
BstF5I GGATG 1 cut(s) 1561
BstFNI CGCG 1 cut(s) 1502
BstH2I RGCGCY 1 cut(s) 1326
BstHHI GCGC 2 cut(s) 1325, 1434
BstKTI GATC 3 cut(s) 259, 439, 1537
BstMAI GTCTC 3 cut(s) 600, 1405, 1536
BstMBI GATC 3 cut(s) 256, 436, 1534
BstMWI GCNNNNNNNGC 5 cut(s) 338, 839, 990, 1440, 1590
BstNI CCWGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
BstPAI GACNNNNGTC 1 cut(s) 364
BstSCI CCNGG 6 cut(s) 348, 521, 741, 913, 1127, 1356
BstSFI CTRYAG 3 cut(s) 132, 306, 321
BstUI CGCG 1 cut(s) 1502
BstV1I GCAGC 4 cut(s) 292, 701, 736, 1322
BstV2I GAAGAC 3 cut(s) 177, 961, 1273
BstX2I RGATCY 1 cut(s) 256
BstYI RGATCY 1 cut(s) 256
BsuI GTATCC 2 cut(s) 131, 903
BsuRI GGCC 3 cut(s) 180, 611, 1622
BtgI CCRYGG 1 cut(s) 15
BtsCI GGATG 1 cut(s) 1561
BtsI GCAGTG 1 cut(s) 800
BtsIMutI CAGTG 6 cut(s) 67, 307, 375, 669, 800, 1473
BveI ACCTGC 1 cut(s) 854
Cac8I GCNNGC 5 cut(s) 609, 982, 1184, 1327, 1595
CfoI GCGC 2 cut(s) 1325, 1434
Cfr13I GGNCC 3 cut(s) 178, 528, 1620
CseI GACGC 3 cut(s) 370, 641, 1537
CsiI ACCWGGT 1 cut(s) 913
Csp6I GTAC 6 cut(s) 276, 404, 412, 563, 819, 1072
CspCI CAANNNNNGTGG 2 cut(s) 43, 78
CviAII CATG 6 cut(s) 16, 700, 796, 1114, 1240, 1459
CviQI GTAC 6 cut(s) 276, 404, 412, 563, 819, 1072
DdeI CTNAG 7 cut(s) 86, 440, 465, 656, 1187, 1255, 1409
DpnI GATC 3 cut(s) 258, 438, 1536
DpnII GATC 3 cut(s) 256, 436, 1534
DrdI GACNNNNNNGTC 1 cut(s) 1463
DseDI GACNNNNNNGTC 1 cut(s) 1463
EaeI YGGCCR 1 cut(s) 609
Eam1104I CTCTTC 2 cut(s) 15, 651
EarI CTCTTC 2 cut(s) 15, 651
EciI GGCGGA 2 cut(s) 541, 999
Ecl136II GAGCTC 1 cut(s) 1254
Eco130I CCWWGG 6 cut(s) 15, 505, 531, 599, 612, 1518
Eco24I GRGCYC 2 cut(s) 795, 1256
Eco47I GGWCC 1 cut(s) 528
Eco53kI GAGCTC 1 cut(s) 1254
Eco57I CTGAAG 3 cut(s) 54, 441, 632
Eco88I CYCGRG 1 cut(s) 994
EcoICRI GAGCTC 1 cut(s) 1254
EcoNI CCTNNNNNAGG 1 cut(s) 1046
EcoRII CCWGG 6 cut(s) 348, 521, 741, 913, 1127, 1356
EcoT14I CCWWGG 6 cut(s) 15, 505, 531, 599, 612, 1518
EcoT38I GRGCYC 2 cut(s) 795, 1256
ErhI CCWWGG 6 cut(s) 15, 505, 531, 599, 612, 1518
Esp3I CGTCTC 1 cut(s) 1536
FaeI CATG 6 cut(s) 19, 703, 799, 1117, 1243, 1462
FalI AAGNNNNNCTT 4 cut(s) 439, 471, 630, 662
FaqI GGGAC 2 cut(s) 259, 898
FatI CATG 6 cut(s) 15, 699, 795, 1113, 1239, 1458
Fnu4HI GCNGC 5 cut(s) 306, 690, 725, 1308, 1311
FokI GGATG 1 cut(s) 1568
FriOI GRGCYC 2 cut(s) 795, 1256
Fsp4HI GCNGC 5 cut(s) 306, 690, 725, 1308, 1311
FspBI CTAG 5 cut(s) 32, 506, 1271, 1326, 1538
FspI TGCGCA 1 cut(s) 1433
GlaI GCGC 2 cut(s) 1324, 1433
GluI GCNGC 5 cut(s) 306, 690, 725, 1308, 1311
HaeII RGCGCY 1 cut(s) 1326
HaeIII GGCC 3 cut(s) 180, 611, 1622
HgaI GACGC 3 cut(s) 370, 641, 1537
HhaI GCGC 2 cut(s) 1325, 1434
Hin1I GRCGYC 2 cut(s) 381, 1548
Hin1II CATG 6 cut(s) 19, 703, 799, 1117, 1243, 1462
Hin6I GCGC 2 cut(s) 1323, 1432
HinP1I GCGC 2 cut(s) 1323, 1432
HinfI GANTC 6 cut(s) 155, 593, 643, 738, 1289, 1559
HphI GGTGA 3 cut(s) 1207, 1219, 1298
Hpy166II GTNNAC 6 cut(s) 412, 453, 565, 1072, 1198, 1473
Hpy188I TCNGA 8 cut(s) 87, 292, 733, 953, 1144, 1396, 1410, 1528
Hpy188III TCNNGA 4 cut(s) 159, 590, 683, 1031
Hpy8I GTNNAC 6 cut(s) 412, 453, 565, 1072, 1198, 1473
Hpy99I CGWCG 2 cut(s) 386, 1553
HpyAV CCTTC 4 cut(s) 124, 441, 1042, 1240
HpyCH4III ACNGT 3 cut(s) 363, 1421, 1477
HpyCH4IV ACGT 2 cut(s) 399, 1161
HpyCH4V TGCA 8 cut(s) 233, 308, 332, 805, 827, 842, 863, 1593
HpyF10VI GCNNNNNNNGC 5 cut(s) 338, 839, 990, 1440, 1590
HpyF3I CTNAG 7 cut(s) 86, 440, 465, 656, 1187, 1255, 1409
HpySE526I ACGT 2 cut(s) 399, 1161
Hsp92I GRCGYC 2 cut(s) 381, 1548
Hsp92II CATG 6 cut(s) 19, 703, 799, 1117, 1243, 1462
HspAI GCGC 2 cut(s) 1323, 1432
KpnI GGTACC 2 cut(s) 407, 822
Kzo9I GATC 3 cut(s) 256, 436, 1534
LmnI GCTCC 2 cut(s) 65, 1251
Lsp1109I GCAGC 4 cut(s) 292, 701, 736, 1322
LweI GCATC 2 cut(s) 462, 850
MabI ACCWGGT 1 cut(s) 913
MaeI CTAG 5 cut(s) 32, 506, 1271, 1326, 1538
MaeII ACGT 2 cut(s) 399, 1161
MaeIII GTNAC 5 cut(s) 798, 919, 1054, 1219, 1350
MalI GATC 3 cut(s) 258, 438, 1536
MboI GATC 3 cut(s) 256, 436, 1534
MboII GAAGA 6 cut(s) 32, 182, 638, 966, 1278, 1284
MflI RGATCY 1 cut(s) 256
MhlI GDGCHC 5 cut(s) 92, 795, 936, 995, 1256
MlsI TGGCCA 1 cut(s) 611
MluCI AATT 6 cut(s) 162, 192, 809, 1234, 1529, 1605
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 4 cut(s) 602, 637, 747, 1568
MmeI TCCRAC 1 cut(s) 931
MnlI CCTC 8 cut(s) 16, 212, 266, 437, 653, 1045, 1480, 1581
Mox20I TGGCCA 1 cut(s) 611
MroXI GAANNNNTTC 1 cut(s) 717
MscI TGGCCA 1 cut(s) 611
MseI TTAA 2 cut(s) 938, 1164
MslI CAYNNNNRTG 1 cut(s) 1067
Msp20I TGGCCA 1 cut(s) 611
MspA1I CMGCKG 4 cut(s) 692, 1175, 1577, 1612
MspR9I CCNGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
Mva1269I GAATGC 2 cut(s) 343, 1019
MvaI CCWGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
MvnI CGCG 1 cut(s) 1502
MwoI GCNNNNNNNGC 5 cut(s) 338, 839, 990, 1440, 1590
NcoI CCATGG 1 cut(s) 15
NdeII GATC 3 cut(s) 256, 436, 1534
NheI GCTAGC 1 cut(s) 1325
NlaIII CATG 6 cut(s) 19, 703, 799, 1117, 1243, 1462
NlaIV GGNNCC 4 cut(s) 112, 347, 405, 820
NmuCI GTSAC 3 cut(s) 798, 1054, 1350
NsbI TGCGCA 1 cut(s) 1433
PaeR7I CTCGAG 1 cut(s) 994
PasI CCCWGGG 1 cut(s) 1128
PctI GAATGC 2 cut(s) 343, 1019
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 2 cut(s) 155, 1289
PflFI GACNNNGTC 3 cut(s) 737, 947, 1547
PfoI TCCNGGA 2 cut(s) 741, 1356
PkrI GCNGC 5 cut(s) 307, 691, 726, 1309, 1312
PleI GAGTC 4 cut(s) 601, 637, 746, 1567
PpsI GAGTC 4 cut(s) 601, 637, 746, 1567
Ppu21I YACGTR 1 cut(s) 400
PshAI GACNNNNGTC 1 cut(s) 364
PsiI TTATAA 1 cut(s) 1481
Psp124BI GAGCTC 1 cut(s) 1256
Psp1406I AACGTT 1 cut(s) 1161
Psp6I CCWGG 6 cut(s) 348, 521, 741, 913, 1127, 1356
PspGI CCWGG 6 cut(s) 348, 521, 741, 913, 1127, 1356
PspN4I GGNNCC 4 cut(s) 112, 347, 405, 820
PspPI GGNCC 3 cut(s) 178, 528, 1620
PspXI VCTCGAGB 1 cut(s) 994
PstI CTGCAG 1 cut(s) 310
PsuI RGATCY 1 cut(s) 256
PsyI GACNNNGTC 3 cut(s) 737, 947, 1547
PvuII CAGCTG 4 cut(s) 692, 1175, 1577, 1612
RsaI GTAC 6 cut(s) 277, 405, 413, 564, 820, 1073
RsaNI GTAC 6 cut(s) 276, 404, 412, 563, 819, 1072
RseI CAYNNNNRTG 1 cut(s) 1067
SacI GAGCTC 1 cut(s) 1256
SaqAI TTAA 2 cut(s) 938, 1164
SatI GCNGC 5 cut(s) 306, 690, 725, 1308, 1311
Sau3AI GATC 3 cut(s) 256, 436, 1534
Sau96I GGNCC 3 cut(s) 178, 528, 1620
SchI GAGTC 4 cut(s) 602, 637, 747, 1568
ScrFI CCNGG 6 cut(s) 350, 523, 743, 915, 1129, 1358
SduI GDGCHC 5 cut(s) 92, 795, 936, 995, 1256
SexAI ACCWGGT 1 cut(s) 913
SfaNI GCATC 2 cut(s) 462, 850
SfcI CTRYAG 3 cut(s) 132, 306, 321
Sfr274I CTCGAG 1 cut(s) 994
SinI GGWCC 1 cut(s) 528
SlaI CTCGAG 1 cut(s) 994
SmiMI CAYNNNNRTG 1 cut(s) 1067
SmlI CTYRAG 2 cut(s) 681, 994
SmoI CTYRAG 2 cut(s) 681, 994
Sse9I AATT 6 cut(s) 162, 192, 809, 1234, 1529, 1605
SsiI CCGC 5 cut(s) 483, 526, 984, 1307, 1502
SspI AATATT 1 cut(s) 297
SspMI CTAG 5 cut(s) 32, 506, 1271, 1326, 1538
SstI GAGCTC 1 cut(s) 1256
StyD4I CCNGG 6 cut(s) 348, 521, 741, 913, 1127, 1356
StyI CCWWGG 6 cut(s) 15, 505, 531, 599, 612, 1518
TaaI ACNGT 3 cut(s) 363, 1421, 1477
TaiI ACGT 2 cut(s) 402, 1164
TaqI TCGA 2 cut(s) 926, 995
TasI AATT 6 cut(s) 162, 192, 809, 1234, 1529, 1605
TatI WGTACW 3 cut(s) 411, 562, 1071
TauI GCSGC 1 cut(s) 1310
TfiI GAWTC 2 cut(s) 155, 1289
Tru1I TTAA 2 cut(s) 938, 1164
Tru9I TTAA 2 cut(s) 938, 1164
TscAI CASTG 6 cut(s) 67, 307, 375, 676, 807, 1480
TseFI GTSAC 3 cut(s) 798, 1054, 1350
TseI GCWGC 4 cut(s) 305, 689, 724, 1310
Tsp45I GTSAC 3 cut(s) 798, 1054, 1350
TspDTI ATGAA 1 cut(s) 574
TspGWI ACGGA 1 cut(s) 269
TspRI CASTG 6 cut(s) 67, 307, 375, 676, 807, 1480
Tth111I GACNNNGTC 3 cut(s) 737, 947, 1547
VpaK11BI GGWCC 1 cut(s) 528
XagI CCTNNNNNAGG 1 cut(s) 1046
XapI RAATTY 2 cut(s) 1529, 1605
XhoI CTCGAG 1 cut(s) 994
XmaJI CCTAGG 1 cut(s) 505
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 5 cut(s) 32, 506, 1271, 1326, 1538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.