Rorug02G0650500
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
75891048 .. 75893290
2243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0650500.1

Sequence Viewer

Length: 606 bp
ATGGCCGAAACTAAGGACCAAGAAGAAGCCACATTGCACGCGAAGCGCAAACCCGATCCCAGCTGCGAAGACCAAGCCGACTACCCCAACAAATCCCACAAGCTTCAAGTCCCCGGCAACAATTCTCAAGGAAAAACTCAAGAAGCACAAAATTTGAAGAGCAATTCCGAAGCTGAATTACAAGGCAATGCAGATCCCGAAGCAGAAGACGAGGAGGACGAAGAGGAGGAATACGGCGATGATGAAGAAGAAGACGGTGAAGAGTCTAATGGGAAATCCGTGGTGGATCGCAAGGGGAAGGGGATTATGAGAGATGACAAGGGCAAAGGGATACTGATAGAAGAAGAAGAAGAAGAAGAAGATGAAGATGGCGAGGAGGATAGCGACGACGACTCCTCCACCGACGACGACGGTGGAAGCGAATTCGAAGACGGCGACAGCGATTTATCGGACGATCCTCTTGCGGAGGTCGATTTGGACAACATTCTTCCTTCCAGGACTCGGAGACGGCAGGTTCAGCCTGGGGTTTACATCCGCAATGATAACAACGCAAACCACACCAACAACGAAGACGATGACAGTGATGATAGCGATGGTTTGAGTTGA

Protein Analysis

201

Amino Acids

22.28

Weight (kDa)

4.05

Isoelectric Point (pI)

70.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000401)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08920 AT1G08920 AT1G08920 AT3G05160 AT3G05160 AT3G05160 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT5G27350 AT5G27360 AT5G27360 AT5G27360 AT5G27360 AT5G27360
fragaria_vesca FvH4_6g05021 FvH4_6g05050 FvH4_6g05051 FvH4_6g05051 FvH4_6g05060 FvH4_6g05061 FvH4_6g05090 FvH4_6g05090 FvH4_6g05090 FvH4_6g05111 FvH4_6g05111 FvH4_6g05120
malus_domestica MD12G1225600.v1.1 MD12G1225900.v1.1 MD12G1226400.v1.1
pyrus_communis pycom12g21050 pycom12g21080
rosa_chinensis RchiOBHm_Chr3g0453541 RchiOBHm_Chr3g0453551 RchiOBHm_Chr3g0453561 RchiOBHm_Chr3g0453571 RchiOBHm_Chr3g0453591 RchiOBHm_Chr3g0453601 RchiOBHm_Chr3g0453621 RchiOBHm_Chr3g0453651
rosa_laevigata RLG00000025501 RLG00000025504 RLG00000025505
rosa_multiflora Rmu_co8451765.1_g000001 Rmu_sc0000510.1_g000021 Rmu_sc0000510.1_g000022 Rmu_sc0000510.1_g000023 Rmu_sc0000510.1_g000027 Rmu_sc0003556.1_g000001 Rmu_sc0003556.1_g000003
rosa_roxburghii Rroxscaffold_5G00359890 Rroxscaffold_5G00359900 Rroxscaffold_6G00430520 Rroxscaffold_6G00430530 Rroxscaffold_6G00430540 Rroxscaffold_6G00430550 Rroxscaffold_6G00430570
rosa_rugosa Rorug02G0649800 Rorug02G0649900 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650100 Rorug02G0650200 Rorug02G0650300 Rorug02G0650400 Rorug02G0650500 Rorug04G0138300
rosa_samantha Rh3AG052800 Rh3AG052900 Rh3AG053000 Rh3AG053100 Rh3AG053200 Rh3AG053400 Rh3BG054300 Rh3BG054400 Rh3BG054500 Rh3BG054600 Rh3BG054700 Rh3BG054900 Rh3CG053600 Rh3CG053700 Rh3CG053800 Rh3CG053900 Rh3CG054100 Rh3DG054400 Rh3DG054500 Rh3DG054700 Rh3DG054800 Rh3DG055000 Rh3DG055200 Rh4DG197900
rosa_wichuraiana Rw3G004070 Rw3G004080 Rw3G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 502
AccII CGCG 1 cut(s) 41
AciI CCGC 2 cut(s) 464, 535
AclWI GGATC 4 cut(s) 50, 188, 294, 449
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 151, 422
AfiI CCNNNNNNNGG 1 cut(s) 501
AgsI TTSAA 2 cut(s) 107, 157
AjnI CCWGG 2 cut(s) 494, 520
AluBI AGCT 3 cut(s) 63, 103, 173
AluI AGCT 3 cut(s) 63, 103, 173
Alw26I GTCTC 1 cut(s) 499
AlwI GGATC 4 cut(s) 50, 188, 294, 449
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 63
ApoI RAATTY 2 cut(s) 151, 422
AspLEI GCGC 1 cut(s) 48
AspS9I GGNCC 1 cut(s) 16
AsuC2I CCSGG 1 cut(s) 114
AsuHPI GGTGA 1 cut(s) 269
AsuII TTCGAA 1 cut(s) 426
AvaII GGWCC 1 cut(s) 16
BarI GAAGNNNNNNTAC 2 cut(s) 162, 194
BbsI GAAGAC 5 cut(s) 75, 213, 258, 435, 576
BbvI GCAGC 1 cut(s) 50
BccI CCATC 2 cut(s) 362, 587
BceAI ACGGC 3 cut(s) 250, 448, 524
BcgI CGANNNNNNTGC 2 cut(s) 443, 477
BciT130I CCWGG 2 cut(s) 496, 522
BciVI GTATCC 1 cut(s) 324
BcnI CCSGG 1 cut(s) 114
BcoDI GTCTC 1 cut(s) 499
BfuAI ACCTGC 1 cut(s) 502
BfuI GTATCC 1 cut(s) 324
BisI GCNGC 1 cut(s) 64
BlsI GCNGC 1 cut(s) 65
Bme1390I CCNGG 3 cut(s) 114, 496, 522
Bme18I GGWCC 1 cut(s) 16
BmgT120I GGNCC 1 cut(s) 16
BmrFI CCNGG 3 cut(s) 114, 496, 522
BpiI GAAGAC 5 cut(s) 75, 213, 258, 435, 576
Bpu14I TTCGAA 1 cut(s) 426
BpuEI CTTGAG 2 cut(s) 111, 123
BpuMI CCSGG 1 cut(s) 114
BsaJI CCNNGG 3 cut(s) 112, 279, 521
BsaXI ACNNNNNCTCC 4 cut(s) 377, 380, 407, 410
Bsc4I CCNNNNNNNGG 1 cut(s) 501
Bse3DI GCAATG 3 cut(s) 32, 193, 544
BseBI CCWGG 2 cut(s) 496, 522
BseDI CCNNGG 3 cut(s) 112, 279, 521
BseGI GGATG 1 cut(s) 531
BseLI CCNNNNNNNGG 1 cut(s) 501
BseMI GCAATG 3 cut(s) 32, 193, 544
BseRI GAGGAG 4 cut(s) 227, 239, 385, 389
BseXI GCAGC 1 cut(s) 50
BseYI CCCAGC 1 cut(s) 59
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 1 cut(s) 5
BsiSI CCGG 1 cut(s) 114
BslFI GGGAC 1 cut(s) 95
BslI CCNNNNNNNGG 1 cut(s) 501
BsmAI GTCTC 1 cut(s) 499
BsmBI CGTCTC 1 cut(s) 499
BsmFI GGGAC 1 cut(s) 95
BsnI GGCC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 426
Bsp143I GATC 4 cut(s) 55, 193, 286, 454
BspACI CCGC 2 cut(s) 464, 535
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 41
BspMI ACCTGC 1 cut(s) 502
BspPI GGATC 4 cut(s) 50, 188, 294, 449
BspQI GCTCTTC 1 cut(s) 152
BspT104I TTCGAA 1 cut(s) 426
BsrDI GCAATG 3 cut(s) 32, 193, 544
BssECI CCNNGG 3 cut(s) 112, 279, 521
BssMI GATC 4 cut(s) 55, 193, 286, 454
Bst2UI CCWGG 2 cut(s) 496, 522
Bst4CI ACNGT 3 cut(s) 257, 413, 581
Bst6I CTCTTC 3 cut(s) 152, 216, 255
BstBI TTCGAA 1 cut(s) 426
BstC8I GCNNGC 1 cut(s) 39
BstDEI CTNAG 1 cut(s) 12
BstDSI CCRYGG 1 cut(s) 279
BstF5I GGATG 1 cut(s) 531
BstFNI CGCG 1 cut(s) 41
BstHHI GCGC 1 cut(s) 48
BstKTI GATC 4 cut(s) 58, 196, 289, 457
BstMAI GTCTC 1 cut(s) 499
BstMBI GATC 4 cut(s) 55, 193, 286, 454
BstMWI GCNNNNNNNGC 2 cut(s) 43, 517
BstNI CCWGG 2 cut(s) 496, 522
BstSCI CCNGG 3 cut(s) 112, 494, 520
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 1 cut(s) 50
BstV2I GAAGAC 5 cut(s) 75, 213, 258, 435, 576
BstX2I RGATCY 1 cut(s) 193
BstYI RGATCY 1 cut(s) 193
BsuI GTATCC 1 cut(s) 324
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 1 cut(s) 279
BtgZI GCGATG 1 cut(s) 252
BtsCI GGATG 1 cut(s) 531
BtsIMutI CAGTG 1 cut(s) 586
BveI ACCTGC 1 cut(s) 502
Cac8I GCNNGC 1 cut(s) 39
CfoI GCGC 1 cut(s) 48
Cfr13I GGNCC 1 cut(s) 16
CviJI RGCY 7 cut(s) 5, 29, 63, 77, 103, 173, 520
CviKI_1 RGCY 7 cut(s) 5, 29, 63, 77, 103, 173, 520
DdeI CTNAG 1 cut(s) 12
DpnI GATC 4 cut(s) 57, 195, 288, 456
DpnII GATC 4 cut(s) 55, 193, 286, 454
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 152, 216, 255
EarI CTCTTC 3 cut(s) 152, 216, 255
Eco47I GGWCC 1 cut(s) 16
EcoRI GAATTC 1 cut(s) 422
EcoRII CCWGG 2 cut(s) 494, 520
Esp3I CGTCTC 1 cut(s) 499
FaiI YATR 1 cut(s) 308
FaqI GGGAC 1 cut(s) 95
Fnu4HI GCNGC 1 cut(s) 64
FokI GGATG 1 cut(s) 518
Fsp4HI GCNGC 1 cut(s) 64
GlaI GCGC 1 cut(s) 47
GluI GCNGC 1 cut(s) 64
GsaI CCCAGC 1 cut(s) 63
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 114
HhaI GCGC 1 cut(s) 48
Hin6I GCGC 1 cut(s) 46
HinP1I GCGC 1 cut(s) 46
HindIII AAGCTT 1 cut(s) 101
HinfI GANTC 3 cut(s) 263, 392, 499
HpaII CCGG 1 cut(s) 114
HphI GGTGA 1 cut(s) 269
Hpy166II GTNNAC 1 cut(s) 529
Hpy188I TCNGA 3 cut(s) 169, 451, 504
Hpy188III TCNNGA 2 cut(s) 140, 197
Hpy8I GTNNAC 1 cut(s) 529
Hpy99I CGWCG 5 cut(s) 389, 392, 407, 410, 413
HpyAV CCTTC 2 cut(s) 292, 501
HpyCH4III ACNGT 3 cut(s) 257, 413, 581
HpyCH4V TGCA 2 cut(s) 37, 191
HpyF10VI GCNNNNNNNGC 2 cut(s) 43, 517
HpyF3I CTNAG 1 cut(s) 12
HspAI GCGC 1 cut(s) 46
Kzo9I GATC 4 cut(s) 55, 193, 286, 454
LguI GCTCTTC 1 cut(s) 152
LpnPI CCDG 7 cut(s) 73, 127, 481, 497, 507, 508, 534
Lsp1109I GCAGC 1 cut(s) 50
MalI GATC 4 cut(s) 57, 195, 288, 456
MboI GATC 4 cut(s) 55, 193, 286, 454
MflI RGATCY 1 cut(s) 193
MluCI AATT 5 cut(s) 121, 151, 163, 176, 422
MlyI GAGTC 3 cut(s) 272, 386, 493
MnlI CCTC 9 cut(s) 205, 208, 217, 220, 367, 370, 406, 460, 468
MspA1I CMGCKG 1 cut(s) 63
MspI CCGG 1 cut(s) 114
MspR9I CCNGG 3 cut(s) 114, 496, 522
MvaI CCWGG 2 cut(s) 496, 522
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 2 cut(s) 43, 517
NciI CCSGG 1 cut(s) 114
NdeII GATC 4 cut(s) 55, 193, 286, 454
NspV TTCGAA 1 cut(s) 426
PciSI GCTCTTC 1 cut(s) 152
PcsI WCGNNNNNNNCGW 4 cut(s) 216, 417, 432, 438
PfoI TCCNGGA 1 cut(s) 494
PkrI GCNGC 1 cut(s) 65
PleI GAGTC 3 cut(s) 271, 386, 493
PpsI GAGTC 3 cut(s) 271, 386, 493
Psp6I CCWGG 2 cut(s) 494, 520
PspFI CCCAGC 1 cut(s) 59
PspGI CCWGG 2 cut(s) 494, 520
PspPI GGNCC 1 cut(s) 16
PsuI RGATCY 1 cut(s) 193
PvuII CAGCTG 1 cut(s) 63
SapI GCTCTTC 1 cut(s) 152
SatI GCNGC 1 cut(s) 64
Sau3AI GATC 4 cut(s) 55, 193, 286, 454
Sau96I GGNCC 1 cut(s) 16
SchI GAGTC 3 cut(s) 272, 386, 493
ScrFI CCNGG 3 cut(s) 114, 496, 522
SetI ASST 5 cut(s) 65, 105, 175, 471, 516
SfuI TTCGAA 1 cut(s) 426
SinI GGWCC 1 cut(s) 16
SmlI CTYRAG 2 cut(s) 126, 138
SmoI CTYRAG 2 cut(s) 126, 138
Sse9I AATT 5 cut(s) 121, 151, 163, 176, 422
SsiI CCGC 2 cut(s) 464, 535
StyD4I CCNGG 3 cut(s) 112, 494, 520
TaaI ACNGT 3 cut(s) 257, 413, 581
TaqI TCGA 2 cut(s) 426, 471
TasI AATT 5 cut(s) 121, 151, 163, 176, 422
TscAI CASTG 1 cut(s) 586
TseI GCWGC 1 cut(s) 63
TspDTI ATGAA 2 cut(s) 258, 378
TspGWI ACGGA 1 cut(s) 268
TspRI CASTG 1 cut(s) 586
VpaK11BI GGWCC 1 cut(s) 16
XapI RAATTY 2 cut(s) 151, 422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.