Rh3AG053100
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0000401
Physical Location & Seq
Forward (+)
3736501 .. 3740435
3935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG053100.1

Sequence Viewer

Length: 1428 bp
ATGGAAGAAGGGCTACTAACTCTATTAGGGTCAAAGTCCAATAATAATGAAGCTTCAGGTAGTTGCAGTGACGTCATAAAGCCAACTGGGTCCTCCTCATCGGCCACCCTTGTTGTGGTTCTGAGCACATTGGTCGCACTATGTGGTTCCTTGGGCTATGGCTGTGCTGTAGGATATTCATCCTCTGCTGAATCAGGAATTCTGGAAGACTTGGACCTTACTGTTGCAGCATACTCAGTTTTTGGTTCAATAATGACGATTGGAGGAATGATTGGTGCACTAGTAAATGGGAAGATAACCGATCTCATTGGTCGTAGAGGAGCAATGTGGCTGTCTGAAACGTTCAGTGCTGCAGGATGGCTCACCATAGCATTTGCACAGAATGCTTGGTGGCTTGATTTAGGACGGTTGTCAGTGGGATTTGGCTTTGCTTTACTGTGCTACGTGGTACCTGTATACATAGCAGAAATAACACCCAAGGATCTTAGAGGAAGATTTACTTCAGCTTGTCAGTTGATGATTAGCTGCGGCTTAGCACTAGCGTTTTTCCTTGGAACTGTCATAAGCTGGCGGACCTTGGCTGTTATCGGTGCTATTCCATCTCTTGTACACATTATTGGTTTATTTTTTATTCCAGAGTCTCCAAGGTGGCTGGCCAAAGTTGGTAGGCACAAGGACTTTGAAGCAGCTCTTCAGCGTCTGAGAGGAAAGAATGCTGACATATCTCAAGAAGCAGCTGAAATCATGGATTATACAGAAATGTTTCAGCAGCACTCGGAAAAAGTCCTAGACTTGTTCCAAAAGAGATATGCTTACTCAGTCATTGTTGGAGTTGGGCTCATGTCACTGCAACAATTTGGGGGTGCTAATGCAGTAGCATATTATGCAAGTTCTATATTTGTAGATGCAGGTTTTTCAAGCAGCATTGGGACTATAACATTGTCTCTCATTGGGATTCCTGGTATTGTGTTGAGTGTGCTCTTAACAGACAAAGTCGGAAGACGACCACTTCTAATGGTTTCTGCTGGCGGATTGTGCCTGAGTGCCCTTGTTGTGGGTTTGGCATTCTTCTTTCAGGACATCAACTTCTGGAAAGAGCTCACTCCCATTTTGGTGTACATCGGCTTGTTGGGTCAAAGTCTATCATACACAATAGGTATAGCAGGATTACCCTGGGTTATTATGTCAGAGATATTCCCCATAAACGTTAAAGGTACAGCTGGAAGCCTGTTGAGTTTGGTGAATTGGTCCTGTGCTTGGATAGTAACGTACACCTTCAATTTCATGATGGAATGGAGCTCAGAAGGGACATTTTTCTTCTTCTCAGCCATTTCCGGCTTAACAGTTCTGTTCGTAGCAATGCTAGTGCCAGAGACAAAGGGGCGAAACCTAGAAGAAATGCAAGCATCAATGGCCCATTTCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

475

Amino Acids

51.03

Weight (kDa)

5.36

Isoelectric Point (pI)

33.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 49 - 415 6.5e-28 Major Facilitator Superfamily
Sugar_tr PF00083 74 - 469 9.2e-83 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000401)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08920 AT1G08920 AT1G08920 AT3G05160 AT3G05160 AT3G05160 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT5G27350 AT5G27360 AT5G27360 AT5G27360 AT5G27360 AT5G27360
fragaria_vesca FvH4_6g05021 FvH4_6g05050 FvH4_6g05051 FvH4_6g05051 FvH4_6g05060 FvH4_6g05061 FvH4_6g05090 FvH4_6g05090 FvH4_6g05090 FvH4_6g05111 FvH4_6g05111 FvH4_6g05120
malus_domestica MD12G1225600.v1.1 MD12G1225900.v1.1 MD12G1226400.v1.1
pyrus_communis pycom12g21050 pycom12g21080
rosa_chinensis RchiOBHm_Chr3g0453541 RchiOBHm_Chr3g0453551 RchiOBHm_Chr3g0453561 RchiOBHm_Chr3g0453571 RchiOBHm_Chr3g0453591 RchiOBHm_Chr3g0453601 RchiOBHm_Chr3g0453621 RchiOBHm_Chr3g0453651
rosa_laevigata RLG00000025501 RLG00000025504 RLG00000025505
rosa_multiflora Rmu_co8451765.1_g000001 Rmu_sc0000510.1_g000021 Rmu_sc0000510.1_g000022 Rmu_sc0000510.1_g000023 Rmu_sc0000510.1_g000027 Rmu_sc0003556.1_g000001 Rmu_sc0003556.1_g000003
rosa_roxburghii Rroxscaffold_5G00359890 Rroxscaffold_5G00359900 Rroxscaffold_6G00430520 Rroxscaffold_6G00430530 Rroxscaffold_6G00430540 Rroxscaffold_6G00430550 Rroxscaffold_6G00430570
rosa_rugosa Rorug02G0649800 Rorug02G0649900 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650100 Rorug02G0650200 Rorug02G0650300 Rorug02G0650400 Rorug02G0650500 Rorug04G0138300
rosa_samantha Rh3AG052800 Rh3AG052900 Rh3AG053000 Rh3AG053100 Rh3AG053200 Rh3AG053400 Rh3BG054300 Rh3BG054400 Rh3BG054500 Rh3BG054600 Rh3BG054700 Rh3BG054900 Rh3CG053600 Rh3CG053700 Rh3CG053800 Rh3CG053900 Rh3CG054100 Rh3DG054400 Rh3DG054500 Rh3DG054700 Rh3DG054800 Rh3DG055000 Rh3DG055200 Rh4DG197900
rosa_wichuraiana Rw3G004070 Rw3G004080 Rw3G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 75
Acc36I ACCTGC 1 cut(s) 899
Acc65I GGTACC 1 cut(s) 448
AccB1I GGYRCC 1 cut(s) 448
AccI GTMKAC 1 cut(s) 456
AciI CCGC 3 cut(s) 528, 571, 1029
AclI AACGTT 2 cut(s) 341, 1206
AclWI GGATC 1 cut(s) 489
AcoI YGGCCR 2 cut(s) 102, 654
AcsI RAATTY 1 cut(s) 198
AcuI CTGAAG 3 cut(s) 39, 486, 677
AcyI GRCGYC 1 cut(s) 72
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 5 cut(s) 450, 609, 1118, 1216, 1271
AfiI CCNNNNNNNGG 3 cut(s) 115, 1054, 1257
AgsI TTSAA 4 cut(s) 249, 683, 918, 1279
AhlI ACTAGT 1 cut(s) 280
AjnI CCWGG 2 cut(s) 958, 1172
AluBI AGCT 9 cut(s) 53, 506, 525, 567, 689, 737, 1099, 1220, 1299
AluI AGCT 9 cut(s) 53, 506, 525, 567, 689, 737, 1099, 1220, 1299
Alw21I GWGCWC 5 cut(s) 128, 280, 981, 1101, 1301
Alw26I GTCTC 3 cut(s) 645, 948, 1367
Alw44I GTGCAC 1 cut(s) 276
AlwI GGATC 1 cut(s) 489
AlwNI CAGNNNCTG 1 cut(s) 700
AoxI GGCC 3 cut(s) 102, 654, 1413
ApaLI GTGCAC 1 cut(s) 276
ApeKI GCWGC 7 cut(s) 227, 350, 525, 686, 734, 769, 921
ApoI RAATTY 1 cut(s) 198
Asp700I GAANNNNTTC 1 cut(s) 762
Asp718I GGTACC 1 cut(s) 448
AspS9I GGNCC 5 cut(s) 90, 214, 573, 1248, 1414
AsuHPI GGTGA 2 cut(s) 355, 1252
AvaII GGWCC 4 cut(s) 90, 214, 573, 1248
BaeGI GKGCMC 2 cut(s) 280, 1048
BalI TGGCCA 1 cut(s) 656
BanI GGYRCC 1 cut(s) 448
BanII GRGCYC 3 cut(s) 840, 1101, 1301
BarI GAAGNNNNNNTAC 1 cut(s) 29
BbsI GAAGAC 2 cut(s) 213, 1006
Bbv12I GWGCWC 5 cut(s) 128, 280, 981, 1101, 1301
BbvI GCAGC 7 cut(s) 239, 337, 512, 698, 746, 781, 933
BccI CCATC 3 cut(s) 351, 607, 1282
BcgI CGANNNNNNTGC 2 cut(s) 115, 149
BciT130I CCWGG 2 cut(s) 960, 1174
BcoDI GTCTC 3 cut(s) 645, 948, 1367
BcuI ACTAGT 1 cut(s) 280
BfaI CTAG 5 cut(s) 281, 539, 788, 1364, 1391
BfmI CTRYAG 2 cut(s) 168, 351
BfuAI ACCTGC 1 cut(s) 899
BisI GCNGC 8 cut(s) 228, 351, 526, 529, 687, 735, 770, 922
BlpI GCTNAGC 1 cut(s) 532
BlsI GCNGC 8 cut(s) 229, 352, 527, 530, 688, 736, 771, 923
Bme1390I CCNGG 2 cut(s) 960, 1174
Bme18I GGWCC 4 cut(s) 90, 214, 573, 1248
BmgT120I GGNCC 5 cut(s) 90, 214, 573, 1248, 1414
BmiI GGNNCC 3 cut(s) 91, 148, 450
BmrFI CCNGG 2 cut(s) 960, 1174
BmrI ACTGGG 1 cut(s) 96
BmsI GCATC 2 cut(s) 895, 1415
BmuI ACTGGG 1 cut(s) 96
BoxI GACNNNNGTC 1 cut(s) 409
BpiI GAAGAC 2 cut(s) 213, 1006
BplI GAGNNNNNCTC 2 cut(s) 822, 854
Bpu1102I GCTNAGC 1 cut(s) 532
BpuEI CTTGAG 1 cut(s) 711
BsaAI YACGTR 1 cut(s) 445
BsaBI GATNNNNATC 1 cut(s) 178
BsaHI GRCGYC 1 cut(s) 72
BsaJI CCNNGG 7 cut(s) 150, 477, 550, 576, 644, 1172, 1173
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 1054, 1257
Bse1I ACTGG 1 cut(s) 91
Bse3DI GCAATG 2 cut(s) 330, 1365
Bse8I GATNNNNATC 1 cut(s) 178
BseBI CCWGG 2 cut(s) 960, 1174
BseDI CCNNGG 7 cut(s) 150, 477, 550, 576, 644, 1172, 1173
BseGI GGATG 2 cut(s) 179, 362
BseJI GATNNNNATC 1 cut(s) 178
BseLI CCNNNNNNNGG 3 cut(s) 115, 1054, 1257
BseMI GCAATG 2 cut(s) 330, 1365
BseMII CTCAG 7 cut(s) 113, 249, 692, 831, 1031, 1314, 1338
BseNI ACTGG 1 cut(s) 91
BseRI GAGGAG 2 cut(s) 85, 333
BseSI GKGCMC 2 cut(s) 280, 1048
BseXI GCAGC 7 cut(s) 239, 337, 512, 698, 746, 781, 933
BshFI GGCC 3 cut(s) 104, 656, 1415
BshNI GGYRCC 1 cut(s) 448
BsiHKAI GWGCWC 5 cut(s) 128, 280, 981, 1101, 1301
BsiSI CCGG 1 cut(s) 1335
BslFI GGGAC 2 cut(s) 943, 1321
BslI CCNNNNNNNGG 3 cut(s) 115, 1054, 1257
BsmAI GTCTC 3 cut(s) 645, 948, 1367
BsmFI GGGAC 2 cut(s) 943, 1321
BsmI GAATGC 3 cut(s) 388, 718, 1064
BsnI GGCC 3 cut(s) 104, 656, 1415
Bsp1286I GDGCHC 7 cut(s) 128, 280, 840, 981, 1048, 1101, 1301
Bsp1407I TGTACA 2 cut(s) 607, 1116
Bsp143I GATC 2 cut(s) 301, 481
Bsp1720I GCTNAGC 1 cut(s) 532
BspACI CCGC 3 cut(s) 528, 571, 1029
BspANI GGCC 3 cut(s) 104, 656, 1415
BspCNI CTCAG 7 cut(s) 114, 248, 693, 830, 1032, 1313, 1337
BspHI TCATGA 1 cut(s) 1284
BspLI GGNNCC 3 cut(s) 91, 148, 450
BspMAI CTGCAG 1 cut(s) 355
BspMI ACCTGC 1 cut(s) 899
BspPI GGATC 1 cut(s) 489
BspQI GCTCTTC 1 cut(s) 696
BspT107I GGYRCC 1 cut(s) 448
BsrDI GCAATG 2 cut(s) 330, 1365
BsrGI TGTACA 2 cut(s) 607, 1116
BsrI ACTGG 1 cut(s) 91
BssECI CCNNGG 7 cut(s) 150, 477, 550, 576, 644, 1172, 1173
BssMI GATC 2 cut(s) 301, 481
BssNAI GTATAC 1 cut(s) 457
BssNI GRCGYC 1 cut(s) 72
BssT1I CCWWGG 5 cut(s) 150, 477, 550, 576, 644
Bst1107I GTATAC 1 cut(s) 457
Bst2UI CCWGG 2 cut(s) 960, 1174
Bst4CI ACNGT 5 cut(s) 223, 408, 438, 559, 1345
Bst6I CTCTTC 1 cut(s) 696
BstACI GRCGYC 1 cut(s) 72
BstAPI GCANNNNNTGC 2 cut(s) 383, 884
BstAUI TGTACA 2 cut(s) 607, 1116
BstBAI YACGTR 1 cut(s) 445
BstC8I GCNNGC 4 cut(s) 569, 654, 1027, 1404
BstDEI CTNAG 9 cut(s) 122, 235, 485, 532, 701, 817, 1040, 1300, 1324
BstF5I GGATG 2 cut(s) 179, 362
BstKTI GATC 2 cut(s) 304, 484
BstMAI GTCTC 3 cut(s) 645, 948, 1367
BstMBI GATC 2 cut(s) 301, 481
BstMWI GCNNNNNNNGC 4 cut(s) 383, 884, 1035, 1412
BstNI CCWGG 2 cut(s) 960, 1174
BstPAI GACNNNNGTC 1 cut(s) 409
BstSCI CCNGG 2 cut(s) 958, 1172
BstSFI CTRYAG 2 cut(s) 168, 351
BstSLI GKGCMC 2 cut(s) 280, 1048
BstV1I GCAGC 7 cut(s) 239, 337, 512, 698, 746, 781, 933
BstV2I GAAGAC 2 cut(s) 213, 1006
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
BstZ17I GTATAC 1 cut(s) 457
BsuRI GGCC 3 cut(s) 104, 656, 1415
BtsCI GGATG 2 cut(s) 179, 362
BtsI GCAGTG 2 cut(s) 73, 845
BtsIMutI CAGTG 4 cut(s) 73, 352, 420, 845
BveI ACCTGC 1 cut(s) 899
Cac8I GCNNGC 4 cut(s) 569, 654, 1027, 1404
CaiI CAGNNNCTG 1 cut(s) 700
CciI TCATGA 1 cut(s) 1284
Cfr13I GGNCC 5 cut(s) 90, 214, 573, 1248, 1414
CseI GACGC 1 cut(s) 686
Csp6I GTAC 5 cut(s) 449, 608, 1117, 1215, 1270
CspCI CAANNNNNGTGG 2 cut(s) 94, 129
CviAII CATG 3 cut(s) 745, 841, 1285
CviQI GTAC 5 cut(s) 449, 608, 1117, 1215, 1270
DdeI CTNAG 9 cut(s) 122, 235, 485, 532, 701, 817, 1040, 1300, 1324
DpnI GATC 2 cut(s) 303, 483
DpnII GATC 2 cut(s) 301, 481
DraIII CACNNNGTG 1 cut(s) 143
EaeI YGGCCR 2 cut(s) 102, 654
Eam1104I CTCTTC 1 cut(s) 696
EarI CTCTTC 1 cut(s) 696
EciI GGCGGA 2 cut(s) 586, 1044
Ecl136II GAGCTC 2 cut(s) 1099, 1299
Eco130I CCWWGG 5 cut(s) 150, 477, 550, 576, 644
Eco24I GRGCYC 3 cut(s) 840, 1101, 1301
Eco47I GGWCC 4 cut(s) 90, 214, 573, 1248
Eco53kI GAGCTC 2 cut(s) 1099, 1299
Eco57I CTGAAG 3 cut(s) 39, 486, 677
EcoICRI GAGCTC 2 cut(s) 1099, 1299
EcoO109I RGGNCCY 1 cut(s) 90
EcoRI GAATTC 1 cut(s) 198
EcoRII CCWGG 2 cut(s) 958, 1172
EcoT14I CCWWGG 5 cut(s) 150, 477, 550, 576, 644
EcoT38I GRGCYC 3 cut(s) 840, 1101, 1301
ErhI CCWWGG 5 cut(s) 150, 477, 550, 576, 644
FaeI CATG 3 cut(s) 748, 844, 1288
FalI AAGNNNNNCTT 4 cut(s) 484, 516, 675, 707
FaqI GGGAC 2 cut(s) 943, 1321
FatI CATG 3 cut(s) 744, 840, 1284
FblI GTMKAC 1 cut(s) 456
Fnu4HI GCNGC 8 cut(s) 228, 351, 526, 529, 687, 735, 770, 922
FokI GGATG 2 cut(s) 166, 369
FriOI GRGCYC 3 cut(s) 840, 1101, 1301
Fsp4HI GCNGC 8 cut(s) 228, 351, 526, 529, 687, 735, 770, 922
FspBI CTAG 5 cut(s) 281, 539, 788, 1364, 1391
GluI GCNGC 8 cut(s) 228, 351, 526, 529, 687, 735, 770, 922
HaeIII GGCC 3 cut(s) 104, 656, 1415
HapII CCGG 1 cut(s) 1335
HgaI GACGC 1 cut(s) 686
Hin1I GRCGYC 1 cut(s) 72
Hin1II CATG 3 cut(s) 748, 844, 1288
HindIII AAGCTT 1 cut(s) 51
HinfI GANTC 3 cut(s) 191, 638, 955
HpaII CCGG 1 cut(s) 1335
HphI GGTGA 2 cut(s) 355, 1252
Hpy166II GTNNAC 5 cut(s) 278, 457, 610, 1117, 1272
Hpy188I TCNGA 8 cut(s) 123, 337, 702, 778, 998, 1189, 1303, 1427
Hpy188III TCNNGA 7 cut(s) 195, 203, 635, 728, 1076, 1090, 1285
Hpy8I GTNNAC 5 cut(s) 278, 457, 610, 1117, 1272
HpyAV CCTTC 2 cut(s) 1285, 1298
HpyCH4III ACNGT 5 cut(s) 223, 408, 438, 559, 1345
HpyCH4IV ACGT 5 cut(s) 72, 341, 444, 1206, 1268
HpyF10VI GCNNNNNNNGC 4 cut(s) 383, 884, 1035, 1412
HpyF3I CTNAG 9 cut(s) 122, 235, 485, 532, 701, 817, 1040, 1300, 1324
HpySE526I ACGT 5 cut(s) 72, 341, 444, 1206, 1268
Hsp92I GRCGYC 1 cut(s) 72
Hsp92II CATG 3 cut(s) 748, 844, 1288
KpnI GGTACC 1 cut(s) 452
Kzo9I GATC 2 cut(s) 301, 481
LguI GCTCTTC 1 cut(s) 696
LmnI GCTCC 2 cut(s) 320, 1296
Lsp1109I GCAGC 7 cut(s) 239, 337, 512, 698, 746, 781, 933
LweI GCATC 2 cut(s) 895, 1415
MaeI CTAG 5 cut(s) 281, 539, 788, 1364, 1391
MaeII ACGT 5 cut(s) 72, 341, 444, 1206, 1268
MaeIII GTNAC 3 cut(s) 68, 843, 1264
MalI GATC 2 cut(s) 303, 483
MboI GATC 2 cut(s) 301, 481
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 7 cut(s) 128, 280, 840, 981, 1048, 1101, 1301
MlsI TGGCCA 1 cut(s) 656
MluCI AATT 4 cut(s) 198, 854, 1243, 1279
MluNI TGGCCA 1 cut(s) 656
MlyI GAGTC 1 cut(s) 647
MmeI TCCRAC 2 cut(s) 808, 976
MnlI CCTC 7 cut(s) 103, 106, 193, 257, 311, 482, 698
Mox20I TGGCCA 1 cut(s) 656
MroXI GAANNNNTTC 1 cut(s) 762
MscI TGGCCA 1 cut(s) 656
MseI TTAA 3 cut(s) 983, 1209, 1340
MslI CAYNNNNRTG 1 cut(s) 1112
Msp20I TGGCCA 1 cut(s) 656
MspA1I CMGCKG 2 cut(s) 737, 1220
MspI CCGG 1 cut(s) 1335
MspR9I CCNGG 2 cut(s) 960, 1174
Mva1269I GAATGC 3 cut(s) 388, 718, 1064
MvaI CCWGG 2 cut(s) 960, 1174
MwoI GCNNNNNNNGC 4 cut(s) 383, 884, 1035, 1412
NdeII GATC 2 cut(s) 301, 481
NlaIII CATG 3 cut(s) 748, 844, 1288
NlaIV GGNNCC 3 cut(s) 91, 148, 450
NmuCI GTSAC 2 cut(s) 68, 843
PagI TCATGA 1 cut(s) 1284
PasI CCCWGGG 1 cut(s) 1173
PciSI GCTCTTC 1 cut(s) 696
PctI GAATGC 3 cut(s) 388, 718, 1064
PdmI GAANNNNTTC 1 cut(s) 762
PfeI GAWTC 2 cut(s) 191, 955
PflFI GACNNNGTC 1 cut(s) 992
PkrI GCNGC 8 cut(s) 229, 352, 527, 530, 688, 736, 771, 923
PleI GAGTC 1 cut(s) 646
PpsI GAGTC 1 cut(s) 646
Ppu21I YACGTR 1 cut(s) 445
PpuMI RGGWCCY 1 cut(s) 90
PshAI GACNNNNGTC 1 cut(s) 409
Psp124BI GAGCTC 2 cut(s) 1101, 1301
Psp1406I AACGTT 2 cut(s) 341, 1206
Psp5II RGGWCCY 1 cut(s) 90
Psp6I CCWGG 2 cut(s) 958, 1172
PspGI CCWGG 2 cut(s) 958, 1172
PspN4I GGNNCC 3 cut(s) 91, 148, 450
PspPI GGNCC 5 cut(s) 90, 214, 573, 1248, 1414
PspPPI RGGWCCY 1 cut(s) 90
PstI CTGCAG 1 cut(s) 355
PstNI CAGNNNCTG 1 cut(s) 700
PsuI RGATCY 1 cut(s) 481
PsyI GACNNNGTC 1 cut(s) 992
PvuII CAGCTG 2 cut(s) 737, 1220
RsaI GTAC 5 cut(s) 450, 609, 1118, 1216, 1271
RsaNI GTAC 5 cut(s) 449, 608, 1117, 1215, 1270
RseI CAYNNNNRTG 1 cut(s) 1112
SacI GAGCTC 2 cut(s) 1101, 1301
SapI GCTCTTC 1 cut(s) 696
SaqAI TTAA 3 cut(s) 983, 1209, 1340
SatI GCNGC 8 cut(s) 228, 351, 526, 529, 687, 735, 770, 922
Sau3AI GATC 2 cut(s) 301, 481
Sau96I GGNCC 5 cut(s) 90, 214, 573, 1248, 1414
SchI GAGTC 1 cut(s) 647
ScrFI CCNGG 2 cut(s) 960, 1174
SduI GDGCHC 7 cut(s) 128, 280, 840, 981, 1048, 1101, 1301
SfaNI GCATC 2 cut(s) 895, 1415
SfcI CTRYAG 2 cut(s) 168, 351
SinI GGWCC 4 cut(s) 90, 214, 573, 1248
SmiMI CAYNNNNRTG 1 cut(s) 1112
SmlI CTYRAG 1 cut(s) 726
SmoI CTYRAG 1 cut(s) 726
SpeI ACTAGT 1 cut(s) 280
Sse9I AATT 4 cut(s) 198, 854, 1243, 1279
SsiI CCGC 3 cut(s) 528, 571, 1029
SspMI CTAG 5 cut(s) 281, 539, 788, 1364, 1391
SstI GAGCTC 2 cut(s) 1101, 1301
StyD4I CCNGG 2 cut(s) 958, 1172
StyI CCWWGG 5 cut(s) 150, 477, 550, 576, 644
TaaI ACNGT 5 cut(s) 223, 408, 438, 559, 1345
TaiI ACGT 5 cut(s) 75, 344, 447, 1209, 1271
TasI AATT 4 cut(s) 198, 854, 1243, 1279
TatI WGTACW 2 cut(s) 607, 1116
TauI GCSGC 1 cut(s) 531
TfiI GAWTC 2 cut(s) 191, 955
Tru1I TTAA 3 cut(s) 983, 1209, 1340
Tru9I TTAA 3 cut(s) 983, 1209, 1340
TscAI CASTG 4 cut(s) 73, 352, 420, 852
TseFI GTSAC 2 cut(s) 68, 843
TseI GCWGC 7 cut(s) 227, 350, 525, 686, 734, 769, 921
Tsp45I GTSAC 2 cut(s) 68, 843
TspDTI ATGAA 3 cut(s) 63, 168, 1273
TspRI CASTG 4 cut(s) 73, 352, 420, 852
Tth111I GACNNNGTC 1 cut(s) 992
VneI GTGCAC 1 cut(s) 276
VpaK11BI GGWCC 4 cut(s) 90, 214, 573, 1248
XapI RAATTY 1 cut(s) 198
XcmI CCANNNNNNNNNTGG 1 cut(s) 112
XmiI GTMKAC 1 cut(s) 456
XmnI GAANNNNTTC 1 cut(s) 762
XspI CTAG 5 cut(s) 281, 539, 788, 1364, 1391
ZraI GACGTC 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.