Rh3CG053800
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000401
Physical Location & Seq
Forward (+)
3719519 .. 3740435
20917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG053800.1

Sequence Viewer

Length: 1428 bp
ATGGAAGAAGGGCTACTAACTCTGTCAGGGTCAATGTCCAATATCAATGGAGCTTCAAGTGATTGCAGTGACGTCATAACTCCAGGAGGGTTCTCCTCCTCGGCCACCCCCGTTGTCGTTCTGAGCGCATTGGTGGCTCTTTGTGGTTCCTTTGGCTATGGCTGTGCTGTAGGATATTCATCCTCTGCTGAATCAGGAATTTTGGAAGACTTGGGCCTTACTATTGCAGCATACTCACTTTTTGGTTCAATTTTGACAATTGGAGGAATAATTGGTGCATTAGTAAATGGGAAGCTAACGGATCTCATTGGTCGTAGAGGTACAATGTGGTTCTCTCAAGTGTTCAGTGCTGCTGGGTGGTTCACCATGGCATTTGCACAGAGTGCTTGGTGGCTGGATATTGGAAGGTTTTCATTGGGAGTTGGCATCGCGATAATTTGCTATGTGGTACCTGTATACATAGCAGAAATAACACCCAAGGATCTGAGAGGAAGGTTTACTTCAGCTCATCAGTTGATGATGAGTTGTGGCGTAGCACTGGCATTTTTCCTTGGAACTGTCATAACCTGGCGAACCTTGGCCGTGATAAGTGCTATTCCATCTCTTGTACACACTATAGGTTTATTTTTCATTCCAGAGTCTCCAAGGTGGCTGGCCAAAATTGGTAGACAAAAAGACTTCGAAGCAGTTCTTCAGCATCTTAGAGGAAAGAATGCCGACATATCTCAAGAAGCAGCTGAAATCATGGATTATACAAAAACCTTTGAGCAGCACTCGGGAAAAGTCATAGACTTGTTCCAGAAGAGATATTCTTACTCACTAATTGTTGGAGTTGGGCTCATGTCCCTGCAACATTTTGGTGGTGCCAATGCAGTATCTGGTTATGCAAGTTCTATATTTGCAGATGCAGGTTTTTCAACGAGCGTTGGGACTATATCAATTGCTCTTATTGGGATTCCTGGTGTTGCCTTGAGTGTGCTCTTAACAGACAAAGTTGGAAGACGACCACTTCTAATGGTTTCTGCTGGCGGATTGTGCCTGAGTGCCCTTGTTGTGGGTTTGGCATTCTTCTTTCAGGACATCAACTTCTGGAAAGAGCTCACTCCCATTTTGGTGTACATCGGCTTGTTGGGTCAAAGTCTATCATACACAATAGGTATAGCAGGATTACCCTGGGTTATTATGTCAGAGATATTCCCCATAAACGTTAAAGGTACAGCTGGAAGCCTGTTGAGTTTGGTGAATTGGTCCTGTGCTTGGATAGTAACGTACACCTTCAATTTCATGATGGAATGGAGCTCAGAAGGGACATTTTTCTTCTTCTCAGCCATTTCCGGCTTAACAGTTCTGTTCGTAGCAATGCTAGTGCCAGAGACAAAGGGGCGAAACCTAGAAGAAATGCAAGCATCAATGGCCCATTTCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

475

Amino Acids

50.79

Weight (kDa)

5.71

Isoelectric Point (pI)

31.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 47 - 415 8.6e-31 Major Facilitator Superfamily
Sugar_tr PF00083 76 - 469 6.1e-81 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000401)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08920 AT1G08920 AT1G08920 AT3G05160 AT3G05160 AT3G05160 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT5G27350 AT5G27360 AT5G27360 AT5G27360 AT5G27360 AT5G27360
fragaria_vesca FvH4_6g05021 FvH4_6g05050 FvH4_6g05051 FvH4_6g05051 FvH4_6g05060 FvH4_6g05061 FvH4_6g05090 FvH4_6g05090 FvH4_6g05090 FvH4_6g05111 FvH4_6g05111 FvH4_6g05120
malus_domestica MD12G1225600.v1.1 MD12G1225900.v1.1 MD12G1226400.v1.1
pyrus_communis pycom12g21050 pycom12g21080
rosa_chinensis RchiOBHm_Chr3g0453541 RchiOBHm_Chr3g0453551 RchiOBHm_Chr3g0453561 RchiOBHm_Chr3g0453571 RchiOBHm_Chr3g0453591 RchiOBHm_Chr3g0453601 RchiOBHm_Chr3g0453621 RchiOBHm_Chr3g0453651
rosa_laevigata RLG00000025501 RLG00000025504 RLG00000025505
rosa_multiflora Rmu_co8451765.1_g000001 Rmu_sc0000510.1_g000021 Rmu_sc0000510.1_g000022 Rmu_sc0000510.1_g000023 Rmu_sc0000510.1_g000027 Rmu_sc0003556.1_g000001 Rmu_sc0003556.1_g000003
rosa_roxburghii Rroxscaffold_5G00359890 Rroxscaffold_5G00359900 Rroxscaffold_6G00430520 Rroxscaffold_6G00430530 Rroxscaffold_6G00430540 Rroxscaffold_6G00430550 Rroxscaffold_6G00430570
rosa_rugosa Rorug02G0649800 Rorug02G0649900 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650100 Rorug02G0650200 Rorug02G0650300 Rorug02G0650400 Rorug02G0650500 Rorug04G0138300
rosa_samantha Rh3AG052800 Rh3AG052900 Rh3AG053000 Rh3AG053100 Rh3AG053200 Rh3AG053400 Rh3BG054300 Rh3BG054400 Rh3BG054500 Rh3BG054600 Rh3BG054700 Rh3BG054900 Rh3CG053600 Rh3CG053700 Rh3CG053800 Rh3CG053900 Rh3CG054100 Rh3DG054400 Rh3DG054500 Rh3DG054700 Rh3DG054800 Rh3DG055000 Rh3DG055200 Rh4DG197900
rosa_wichuraiana Rw3G004070 Rw3G004080 Rw3G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 75
Acc36I ACCTGC 1 cut(s) 899
Acc65I GGTACC 1 cut(s) 448
AccB1I GGYRCC 2 cut(s) 448, 863
AccI GTMKAC 2 cut(s) 456, 667
AccII CGCG 1 cut(s) 431
AciI CCGC 1 cut(s) 1029
AclI AACGTT 1 cut(s) 1206
AclWI GGATC 2 cut(s) 309, 489
AcoI YGGCCR 3 cut(s) 102, 579, 654
AcsI RAATTY 1 cut(s) 198
AcuI CTGAAG 2 cut(s) 486, 677
AcyI GRCGYC 1 cut(s) 72
AdeI CACNNNGTG 1 cut(s) 383
AfaI GTAC 6 cut(s) 322, 450, 609, 1118, 1216, 1271
AfiI CCNNNNNNNGG 2 cut(s) 1054, 1257
AgsI TTSAA 4 cut(s) 57, 249, 918, 1279
AjnI CCWGG 4 cut(s) 82, 566, 958, 1172
AluBI AGCT 7 cut(s) 53, 295, 506, 737, 1099, 1220, 1299
AluI AGCT 7 cut(s) 53, 295, 506, 737, 1099, 1220, 1299
Alw21I GWGCWC 3 cut(s) 981, 1101, 1301
Alw26I GTCTC 2 cut(s) 645, 1367
AlwI GGATC 2 cut(s) 309, 489
AlwNI CAGNNNCTG 1 cut(s) 878
Ama87I CYCGRG 1 cut(s) 775
AoxI GGCC 5 cut(s) 102, 214, 579, 654, 1413
ApeKI GCWGC 4 cut(s) 227, 350, 734, 769
ApoI RAATTY 1 cut(s) 198
Asp700I GAANNNNTTC 2 cut(s) 409, 687
Asp718I GGTACC 1 cut(s) 448
AspLEI GCGC 1 cut(s) 128
AspS9I GGNCC 3 cut(s) 214, 1248, 1414
AsuHPI GGTGA 2 cut(s) 355, 1252
AsuII TTCGAA 1 cut(s) 681
AvaI CYCGRG 1 cut(s) 775
AvaII GGWCC 1 cut(s) 1248
BaeGI GKGCMC 1 cut(s) 1048
BalI TGGCCA 1 cut(s) 656
BanI GGYRCC 2 cut(s) 448, 863
BanII GRGCYC 3 cut(s) 840, 1101, 1301
BarI GAAGNNNNNNTAC 1 cut(s) 29
BbsI GAAGAC 2 cut(s) 213, 1006
Bbv12I GWGCWC 3 cut(s) 981, 1101, 1301
BbvI GCAGC 4 cut(s) 239, 337, 746, 781
BccI CCATC 2 cut(s) 607, 1282
BceAI ACGGC 1 cut(s) 566
BciT130I CCWGG 4 cut(s) 84, 568, 960, 1174
BcoDI GTCTC 2 cut(s) 645, 1367
BfaI CTAG 2 cut(s) 1364, 1391
BfmI CTRYAG 2 cut(s) 168, 615
BfuAI ACCTGC 1 cut(s) 899
BisI GCNGC 4 cut(s) 228, 351, 735, 770
BlsI GCNGC 4 cut(s) 229, 352, 736, 771
Bme1390I CCNGG 4 cut(s) 84, 568, 960, 1174
Bme18I GGWCC 1 cut(s) 1248
BmeT110I CYCGRG 1 cut(s) 775
BmgT120I GGNCC 3 cut(s) 214, 1248, 1414
BmiI GGNNCC 3 cut(s) 148, 450, 865
BmrFI CCNGG 4 cut(s) 84, 568, 960, 1174
BmsI GCATC 4 cut(s) 435, 706, 895, 1415
BpiI GAAGAC 2 cut(s) 213, 1006
BplI GAGNNNNNCTC 4 cut(s) 758, 790, 822, 854
BpmI CTGGAG 1 cut(s) 66
Bpu14I TTCGAA 1 cut(s) 681
BpuEI CTTGAG 3 cut(s) 321, 711, 991
BsaBI GATNNNNATC 1 cut(s) 178
BsaHI GRCGYC 1 cut(s) 72
BsaJI CCNNGG 8 cut(s) 99, 366, 477, 550, 576, 644, 1172, 1173
Bsc4I CCNNNNNNNGG 2 cut(s) 1054, 1257
Bse1I ACTGG 1 cut(s) 543
Bse3DI GCAATG 1 cut(s) 1365
Bse8I GATNNNNATC 1 cut(s) 178
BseBI CCWGG 4 cut(s) 84, 568, 960, 1174
BseDI CCNNGG 8 cut(s) 99, 366, 477, 550, 576, 644, 1172, 1173
BseGI GGATG 1 cut(s) 179
BseJI GATNNNNATC 1 cut(s) 178
BseLI CCNNNNNNNGG 2 cut(s) 1054, 1257
BseMI GCAATG 1 cut(s) 1365
BseMII CTCAG 5 cut(s) 113, 476, 1031, 1314, 1338
BseNI ACTGG 1 cut(s) 543
BseRI GAGGAG 2 cut(s) 85, 88
BseSI GKGCMC 1 cut(s) 1048
BseXI GCAGC 4 cut(s) 239, 337, 746, 781
BseYI CCCAGC 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 431
BshFI GGCC 5 cut(s) 104, 216, 581, 656, 1415
BshNI GGYRCC 2 cut(s) 448, 863
BsiHKAI GWGCWC 3 cut(s) 981, 1101, 1301
BsiHKCI CYCGRG 1 cut(s) 775
BsiSI CCGG 1 cut(s) 1335
BslFI GGGAC 3 cut(s) 829, 943, 1321
BslI CCNNNNNNNGG 2 cut(s) 1054, 1257
BsmAI GTCTC 2 cut(s) 645, 1367
BsmFI GGGAC 3 cut(s) 829, 943, 1321
BsmI GAATGC 2 cut(s) 718, 1064
BsnI GGCC 5 cut(s) 104, 216, 581, 656, 1415
BsoBI CYCGRG 1 cut(s) 775
Bsp119I TTCGAA 1 cut(s) 681
Bsp1286I GDGCHC 5 cut(s) 840, 981, 1048, 1101, 1301
Bsp1407I TGTACA 2 cut(s) 607, 1116
Bsp143I GATC 2 cut(s) 301, 481
Bsp19I CCATGG 1 cut(s) 366
Bsp68I TCGCGA 1 cut(s) 431
BspACI CCGC 1 cut(s) 1029
BspANI GGCC 5 cut(s) 104, 216, 581, 656, 1415
BspCNI CTCAG 5 cut(s) 114, 477, 1032, 1313, 1337
BspFNI CGCG 1 cut(s) 431
BspHI TCATGA 1 cut(s) 1284
BspLI GGNNCC 3 cut(s) 148, 450, 865
BspMI ACCTGC 1 cut(s) 899
BspPI GGATC 2 cut(s) 309, 489
BspT104I TTCGAA 1 cut(s) 681
BspT107I GGYRCC 2 cut(s) 448, 863
BsrDI GCAATG 1 cut(s) 1365
BsrGI TGTACA 2 cut(s) 607, 1116
BsrI ACTGG 1 cut(s) 543
BssECI CCNNGG 8 cut(s) 99, 366, 477, 550, 576, 644, 1172, 1173
BssMI GATC 2 cut(s) 301, 481
BssNAI GTATAC 1 cut(s) 457
BssNI GRCGYC 1 cut(s) 72
BssT1I CCWWGG 5 cut(s) 366, 477, 550, 576, 644
Bst1107I GTATAC 1 cut(s) 457
Bst2UI CCWGG 4 cut(s) 84, 568, 960, 1174
Bst4CI ACNGT 2 cut(s) 559, 1345
Bst6I CTCTTC 1 cut(s) 797
BstACI GRCGYC 1 cut(s) 72
BstAPI GCANNNNNTGC 1 cut(s) 383
BstAUI TGTACA 2 cut(s) 607, 1116
BstBI TTCGAA 1 cut(s) 681
BstC8I GCNNGC 3 cut(s) 654, 1027, 1404
BstDEI CTNAG 6 cut(s) 122, 485, 701, 1040, 1300, 1324
BstDSI CCRYGG 1 cut(s) 366
BstF5I GGATG 1 cut(s) 179
BstFNI CGCG 1 cut(s) 431
BstHHI GCGC 1 cut(s) 128
BstKTI GATC 2 cut(s) 304, 484
BstMAI GTCTC 2 cut(s) 645, 1367
BstMBI GATC 2 cut(s) 301, 481
BstMWI GCNNNNNNNGC 4 cut(s) 134, 383, 1035, 1412
BstNI CCWGG 4 cut(s) 84, 568, 960, 1174
BstSCI CCNGG 4 cut(s) 82, 566, 958, 1172
BstSFI CTRYAG 2 cut(s) 168, 615
BstSLI GKGCMC 1 cut(s) 1048
BstUI CGCG 1 cut(s) 431
BstV1I GCAGC 4 cut(s) 239, 337, 746, 781
BstV2I GAAGAC 2 cut(s) 213, 1006
BstX2I RGATCY 2 cut(s) 301, 481
BstYI RGATCY 2 cut(s) 301, 481
BstZ17I GTATAC 1 cut(s) 457
BsuRI GGCC 5 cut(s) 104, 216, 581, 656, 1415
BtgI CCRYGG 1 cut(s) 366
BtgZI GCGATG 1 cut(s) 412
BtsCI GGATG 1 cut(s) 179
BtsI GCAGTG 1 cut(s) 73
BtsIMutI CAGTG 3 cut(s) 73, 352, 536
BtuMI TCGCGA 1 cut(s) 431
BveI ACCTGC 1 cut(s) 899
Cac8I GCNNGC 3 cut(s) 654, 1027, 1404
CaiI CAGNNNCTG 1 cut(s) 878
CciI TCATGA 1 cut(s) 1284
CfoI GCGC 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 214, 1248, 1414
Csp6I GTAC 6 cut(s) 321, 449, 608, 1117, 1215, 1270
CspCI CAANNNNNGTGG 2 cut(s) 94, 129
CviAII CATG 4 cut(s) 367, 745, 841, 1285
CviQI GTAC 6 cut(s) 321, 449, 608, 1117, 1215, 1270
DdeI CTNAG 6 cut(s) 122, 485, 701, 1040, 1300, 1324
DpnI GATC 2 cut(s) 303, 483
DpnII GATC 2 cut(s) 301, 481
DraIII CACNNNGTG 1 cut(s) 383
EaeI YGGCCR 3 cut(s) 102, 579, 654
Eam1104I CTCTTC 1 cut(s) 797
EarI CTCTTC 1 cut(s) 797
EciI GGCGGA 1 cut(s) 1044
Ecl136II GAGCTC 2 cut(s) 1099, 1299
Eco130I CCWWGG 5 cut(s) 366, 477, 550, 576, 644
Eco24I GRGCYC 3 cut(s) 840, 1101, 1301
Eco47I GGWCC 1 cut(s) 1248
Eco53kI GAGCTC 2 cut(s) 1099, 1299
Eco57I CTGAAG 2 cut(s) 486, 677
Eco88I CYCGRG 1 cut(s) 775
EcoICRI GAGCTC 2 cut(s) 1099, 1299
EcoRII CCWGG 4 cut(s) 82, 566, 958, 1172
EcoT14I CCWWGG 5 cut(s) 366, 477, 550, 576, 644
EcoT38I GRGCYC 3 cut(s) 840, 1101, 1301
ErhI CCWWGG 5 cut(s) 366, 477, 550, 576, 644
FaeI CATG 4 cut(s) 370, 748, 844, 1288
FalI AAGNNNNNCTT 4 cut(s) 484, 516, 675, 707
FaqI GGGAC 3 cut(s) 829, 943, 1321
FatI CATG 4 cut(s) 366, 744, 840, 1284
FblI GTMKAC 2 cut(s) 456, 667
Fnu4HI GCNGC 4 cut(s) 228, 351, 735, 770
FokI GGATG 1 cut(s) 166
FriOI GRGCYC 3 cut(s) 840, 1101, 1301
Fsp4HI GCNGC 4 cut(s) 228, 351, 735, 770
FspBI CTAG 2 cut(s) 1364, 1391
GlaI GCGC 1 cut(s) 127
GluI GCNGC 4 cut(s) 228, 351, 735, 770
GsaI CCCAGC 1 cut(s) 357
GsuI CTGGAG 1 cut(s) 66
HaeIII GGCC 5 cut(s) 104, 216, 581, 656, 1415
HapII CCGG 1 cut(s) 1335
HhaI GCGC 1 cut(s) 128
Hin1I GRCGYC 1 cut(s) 72
Hin1II CATG 4 cut(s) 370, 748, 844, 1288
Hin6I GCGC 1 cut(s) 126
HinP1I GCGC 1 cut(s) 126
HinfI GANTC 3 cut(s) 191, 638, 955
HpaII CCGG 1 cut(s) 1335
HphI GGTGA 2 cut(s) 355, 1252
Hpy166II GTNNAC 7 cut(s) 363, 457, 498, 610, 668, 1117, 1272
Hpy188I TCNGA 5 cut(s) 123, 486, 1189, 1303, 1427
Hpy188III TCNNGA 9 cut(s) 195, 430, 635, 728, 777, 799, 1076, 1090, 1285
Hpy8I GTNNAC 7 cut(s) 363, 457, 498, 610, 668, 1117, 1272
HpyAV CCTTC 4 cut(s) 399, 486, 1285, 1298
HpyCH4III ACNGT 2 cut(s) 559, 1345
HpyCH4IV ACGT 3 cut(s) 72, 1206, 1268
HpyF10VI GCNNNNNNNGC 4 cut(s) 134, 383, 1035, 1412
HpyF3I CTNAG 6 cut(s) 122, 485, 701, 1040, 1300, 1324
HpySE526I ACGT 3 cut(s) 72, 1206, 1268
Hsp92I GRCGYC 1 cut(s) 72
Hsp92II CATG 4 cut(s) 370, 748, 844, 1288
HspAI GCGC 1 cut(s) 126
KpnI GGTACC 1 cut(s) 452
Kzo9I GATC 2 cut(s) 301, 481
LmnI GCTCC 2 cut(s) 50, 1296
Lsp1109I GCAGC 4 cut(s) 239, 337, 746, 781
LweI GCATC 4 cut(s) 435, 706, 895, 1415
MaeI CTAG 2 cut(s) 1364, 1391
MaeII ACGT 3 cut(s) 72, 1206, 1268
MaeIII GTNAC 2 cut(s) 68, 1264
MalI GATC 2 cut(s) 303, 483
MboI GATC 2 cut(s) 301, 481
MboII GAAGA 9 cut(s) 17, 218, 683, 814, 1011, 1060, 1309, 1312, 1406
MfeI CAATTG 2 cut(s) 258, 939
MflI RGATCY 2 cut(s) 301, 481
MhlI GDGCHC 5 cut(s) 840, 981, 1048, 1101, 1301
MlsI TGGCCA 1 cut(s) 656
MluNI TGGCCA 1 cut(s) 656
MlyI GAGTC 1 cut(s) 647
MmeI TCCRAC 2 cut(s) 808, 976
MnlI CCTC 8 cut(s) 80, 106, 109, 193, 257, 311, 482, 698
Mox20I TGGCCA 1 cut(s) 656
MroXI GAANNNNTTC 2 cut(s) 409, 687
MscI TGGCCA 1 cut(s) 656
MseI TTAA 3 cut(s) 983, 1209, 1340
MslI CAYNNNNRTG 2 cut(s) 858, 1112
Msp20I TGGCCA 1 cut(s) 656
MspA1I CMGCKG 2 cut(s) 737, 1220
MspI CCGG 1 cut(s) 1335
MspR9I CCNGG 4 cut(s) 84, 568, 960, 1174
MunI CAATTG 2 cut(s) 258, 939
Mva1269I GAATGC 2 cut(s) 718, 1064
MvaI CCWGG 4 cut(s) 84, 568, 960, 1174
MvnI CGCG 1 cut(s) 431
MwoI GCNNNNNNNGC 4 cut(s) 134, 383, 1035, 1412
NcoI CCATGG 1 cut(s) 366
NdeII GATC 2 cut(s) 301, 481
NlaIII CATG 4 cut(s) 370, 748, 844, 1288
NlaIV GGNNCC 3 cut(s) 148, 450, 865
NmeAIII GCCGAG 1 cut(s) 80
NmuCI GTSAC 1 cut(s) 68
NruI TCGCGA 1 cut(s) 431
NspV TTCGAA 1 cut(s) 681
PagI TCATGA 1 cut(s) 1284
PasI CCCWGGG 1 cut(s) 1173
PctI GAATGC 2 cut(s) 718, 1064
PdmI GAANNNNTTC 2 cut(s) 409, 687
PfeI GAWTC 2 cut(s) 191, 955
PfoI TCCNGGA 1 cut(s) 82
PkrI GCNGC 4 cut(s) 229, 352, 736, 771
PleI GAGTC 1 cut(s) 646
PpsI GAGTC 1 cut(s) 646
Psp124BI GAGCTC 2 cut(s) 1101, 1301
Psp1406I AACGTT 1 cut(s) 1206
Psp6I CCWGG 4 cut(s) 82, 566, 958, 1172
PspFI CCCAGC 1 cut(s) 353
PspGI CCWGG 4 cut(s) 82, 566, 958, 1172
PspN4I GGNNCC 3 cut(s) 148, 450, 865
PspPI GGNCC 3 cut(s) 214, 1248, 1414
PstNI CAGNNNCTG 1 cut(s) 878
PsuI RGATCY 2 cut(s) 301, 481
PvuII CAGCTG 2 cut(s) 737, 1220
RruI TCGCGA 1 cut(s) 431
RsaI GTAC 6 cut(s) 322, 450, 609, 1118, 1216, 1271
RsaNI GTAC 6 cut(s) 321, 449, 608, 1117, 1215, 1270
RseI CAYNNNNRTG 2 cut(s) 858, 1112
SacI GAGCTC 2 cut(s) 1101, 1301
SaqAI TTAA 3 cut(s) 983, 1209, 1340
SatI GCNGC 4 cut(s) 228, 351, 735, 770
Sau3AI GATC 2 cut(s) 301, 481
Sau96I GGNCC 3 cut(s) 214, 1248, 1414
SchI GAGTC 1 cut(s) 647
ScrFI CCNGG 4 cut(s) 84, 568, 960, 1174
SduI GDGCHC 5 cut(s) 840, 981, 1048, 1101, 1301
SfaNI GCATC 4 cut(s) 435, 706, 895, 1415
SfcI CTRYAG 2 cut(s) 168, 615
SfuI TTCGAA 1 cut(s) 681
SinI GGWCC 1 cut(s) 1248
SmiMI CAYNNNNRTG 2 cut(s) 858, 1112
SmlI CTYRAG 3 cut(s) 336, 726, 970
SmoI CTYRAG 3 cut(s) 336, 726, 970
SsiI CCGC 1 cut(s) 1029
SspMI CTAG 2 cut(s) 1364, 1391
SstI GAGCTC 2 cut(s) 1101, 1301
StyD4I CCNGG 4 cut(s) 82, 566, 958, 1172
StyI CCWWGG 5 cut(s) 366, 477, 550, 576, 644
TaaI ACNGT 2 cut(s) 559, 1345
TaiI ACGT 3 cut(s) 75, 1209, 1271
TaqI TCGA 1 cut(s) 681
TatI WGTACW 2 cut(s) 607, 1116
TfiI GAWTC 2 cut(s) 191, 955
Tru1I TTAA 3 cut(s) 983, 1209, 1340
Tru9I TTAA 3 cut(s) 983, 1209, 1340
TscAI CASTG 3 cut(s) 73, 352, 543
TseFI GTSAC 1 cut(s) 68
TseI GCWGC 4 cut(s) 227, 350, 734, 769
Tsp45I GTSAC 1 cut(s) 68
TspDTI ATGAA 4 cut(s) 168, 402, 619, 1273
TspGWI ACGGA 1 cut(s) 314
TspRI CASTG 3 cut(s) 73, 352, 543
VpaK11BI GGWCC 1 cut(s) 1248
XapI RAATTY 1 cut(s) 198
XmiI GTMKAC 2 cut(s) 456, 667
XmnI GAANNNNTTC 2 cut(s) 409, 687
XspI CTAG 2 cut(s) 1364, 1391
ZraI GACGTC 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.