AT3G05165
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
1457381 .. 1462963
5583 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05165.6

Sequence Viewer

Length: 1404 bp
ATGGTGGTGGAGGAGGAGAATAGAAGCATGGAGGAAGGACTTCTTCAGCATCAAAACGACAGAGATGATCGTCGTATCACAGCTTGTGTCATCCTCAGCACTTTTGTCGCTGTTTGTAGTGCCTTCAGCTACGGATGTGCCGCTGGTTATACTTCAGGCGCTGAGACTGCTATCATGAAGGAGTTAGACCTTTCTATGGCACAATTTTCAGCGTTTGGCTCCTTTCTGAATGTGGGAGGTGCGGTGGGGGCCTTGTTCAGCGGTCAATTGGCAGTCATCCTCGGCAGAAGACGAACGTTGTGGGCATGCGATTTTTTCTGCGTTTTTGGCTGGCTCTCCATTGCTTTCGCAAAGAATGTCTTCTGGCTGGACTTGGGAAGAATTTCCTTGGGCATAGGAGTCGGCTTGATTAGCTACGTGGTCCCAGTCTATATTGCGGAAATCACTCCAAAACATGTTCGTGGCGCATTTACTGCTTCAAACCAGCTTCTTCAAAACAGTGGAGTTTCCCTGATTTATTTTTTTGGGACTGTAATTAATTGGCGGGTTATGGCCGTTATAGGTGCAATTCCATGCATCCTTCAAACGATCGGTATATTTTTTATACCGGAATCTCCAAGATGGCTGGCTAAAATCCGTTTAAGTAAAGAAGTAGAAAGTTCTTTGCATCGACTTAGAGGGAAAGATACTGATGTTTCAGGTGAAGCAGCTGAAATTCAGGTTATGACAAAAATGCTTGAAGAAGATTCAAAGTCTAGTTTCTCTGACATGTTTCAGAAGAAGTACAGACGAACTCTTGTGGTTGGAATTGGTTTAATGTTGATACAACAATTATCTGGAGCTAGCGGTATCACATATTATTCAAATGCCATATTTAGAAAAGCTGGCTTTTCAGAGAGACTTGGATCAATGATATTTGGTGTGTTCGTGATCCCAAAAGCTTTGGTTGGTCTGATTCTTGTGGATAGATGGGGAAGACGACCACTCCTATTGGCTTCTGCTGTTGGAATGTCCATCGGATCCTTGCTTATTGGAGTTAGCTTCACGTTACAGCAAATGAATGTGCTTCCTGAATTGATCCCAATTTTCGTCTTCGTAAACATTCTGGTCTACTTCGGATGTTTTGCATTCGGTATAGGAGGGCTACCTTGGGTCATTATGTCTGAGATCTTTCCGATAAATATAAAAGTTTCAGCAGGAACAATTGTAGCATTAACATCATGGACTAGTGGGTGGTTCGTGAGTTACGCTTTCAACTTTATGTTTGAATGGAGCGCACAAGGAACATTTTACATATTTGCGGCTGTCGGAGGAATGTCATTCATTTTTATTTGGATGCTCGTACCGGAAACCAAAGGACAATCATTGGAAGAATTACAAGCTTCGCTTACGGGGACATCCTAA

Protein Analysis

467

Amino Acids

51.29

Weight (kDa)

8.1

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 39 - 439 1.7e-79 Sugar (and other) transporter
MFS_1 PF07690 39 - 415 1.8e-24 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000401)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08920 AT1G08920 AT1G08920 AT3G05160 AT3G05160 AT3G05160 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT5G27350 AT5G27360 AT5G27360 AT5G27360 AT5G27360 AT5G27360
fragaria_vesca FvH4_6g05021 FvH4_6g05050 FvH4_6g05051 FvH4_6g05051 FvH4_6g05060 FvH4_6g05061 FvH4_6g05090 FvH4_6g05090 FvH4_6g05090 FvH4_6g05111 FvH4_6g05111 FvH4_6g05120
malus_domestica MD12G1225600.v1.1 MD12G1225900.v1.1 MD12G1226400.v1.1
pyrus_communis pycom12g21050 pycom12g21080
rosa_chinensis RchiOBHm_Chr3g0453541 RchiOBHm_Chr3g0453551 RchiOBHm_Chr3g0453561 RchiOBHm_Chr3g0453571 RchiOBHm_Chr3g0453591 RchiOBHm_Chr3g0453601 RchiOBHm_Chr3g0453621 RchiOBHm_Chr3g0453651
rosa_laevigata RLG00000025501 RLG00000025504 RLG00000025505
rosa_multiflora Rmu_co8451765.1_g000001 Rmu_sc0000510.1_g000021 Rmu_sc0000510.1_g000022 Rmu_sc0000510.1_g000023 Rmu_sc0000510.1_g000027 Rmu_sc0003556.1_g000001 Rmu_sc0003556.1_g000003
rosa_roxburghii Rroxscaffold_5G00359890 Rroxscaffold_5G00359900 Rroxscaffold_6G00430520 Rroxscaffold_6G00430530 Rroxscaffold_6G00430540 Rroxscaffold_6G00430550 Rroxscaffold_6G00430570
rosa_rugosa Rorug02G0649800 Rorug02G0649900 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650100 Rorug02G0650200 Rorug02G0650300 Rorug02G0650400 Rorug02G0650500 Rorug04G0138300
rosa_samantha Rh3AG052800 Rh3AG052900 Rh3AG053000 Rh3AG053100 Rh3AG053200 Rh3AG053400 Rh3BG054300 Rh3BG054400 Rh3BG054500 Rh3BG054600 Rh3BG054700 Rh3BG054900 Rh3CG053600 Rh3CG053700 Rh3CG053800 Rh3CG053900 Rh3CG054100 Rh3DG054400 Rh3DG054500 Rh3DG054700 Rh3DG054800 Rh3DG055000 Rh3DG055200 Rh4DG197900
rosa_wichuraiana Rw3G004070 Rw3G004080 Rw3G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1110
AciI CCGC 7 cut(s) 141, 242, 261, 437, 544, 846, 1301
AclI AACGTT 1 cut(s) 296
AclWI GGATC 5 cut(s) 913, 925, 1014, 1027, 1072
AcoI YGGCCR 1 cut(s) 552
AcsI RAATTY 2 cut(s) 381, 714
AcuI CTGAAG 3 cut(s) 29, 109, 138
AfaI GTAC 2 cut(s) 785, 1344
AfiI CCNNNNNNNGG 1 cut(s) 196
AflIII ACRYGT 2 cut(s) 454, 768
AgsI TTSAA 8 cut(s) 480, 494, 584, 740, 750, 864, 1255, 1268
AhlI ACTAGT 1 cut(s) 1226
Alw26I GTCTC 2 cut(s) 158, 892
AlwI GGATC 5 cut(s) 913, 925, 1014, 1027, 1072
AlwNI CAGNNNCTG 1 cut(s) 161
AoxI GGCC 2 cut(s) 249, 552
ApeKI GCWGC 1 cut(s) 707
ApoI RAATTY 2 cut(s) 381, 714
AseI ATTAAT 1 cut(s) 537
Asp700I GAANNNNTTC 3 cut(s) 39, 359, 382
AspLEI GCGC 3 cut(s) 161, 467, 1277
AspS9I GGNCC 2 cut(s) 249, 421
AsuHPI GGTGA 1 cut(s) 713
AsuNHI GCTAGC 1 cut(s) 842
AvaII GGWCC 1 cut(s) 421
BaeI ACNNNNGTAYC 2 cut(s) 678, 711
BamHI GGATCC 1 cut(s) 1019
BbsI GAAGAC 4 cut(s) 295, 352, 982, 1084
BbvCI CCTCAGC 1 cut(s) 95
BbvI GCAGC 1 cut(s) 719
BccI CCATC 3 cut(s) 615, 963, 1022
BceAI ACGGC 1 cut(s) 539
BcgI CGANNNNNNTGC 4 cut(s) 88, 122, 382, 416
BcoDI GTCTC 2 cut(s) 158, 892
BcuI ACTAGT 1 cut(s) 1226
BfaI CTAG 3 cut(s) 756, 843, 1227
BfoI RGCGCY 1 cut(s) 162
BglII AGATCT 1 cut(s) 1167
BisI GCNGC 3 cut(s) 141, 708, 1302
BlsI GCNGC 3 cut(s) 142, 709, 1303
Bme18I GGWCC 1 cut(s) 421
BmgT120I GGNCC 2 cut(s) 249, 421
BmiI GGNNCC 4 cut(s) 220, 250, 423, 1021
BmrI ACTGGG 1 cut(s) 419
BmsI GCATC 4 cut(s) 58, 585, 676, 1326
BmtI GCTAGC 1 cut(s) 846
BmuI ACTGGG 1 cut(s) 419
BpiI GAAGAC 4 cut(s) 295, 352, 982, 1084
BpmI CTGGAG 1 cut(s) 858
Bpu10I CCTNAGC 1 cut(s) 95
BsaAI YACGTR 1 cut(s) 418
BsaJI CCNNGG 3 cut(s) 280, 387, 1148
BsaWI WCCGGW 2 cut(s) 607, 1345
BsaXI ACNNNNNCTCC 4 cut(s) 228, 258, 969, 999
Bsc4I CCNNNNNNNGG 1 cut(s) 196
Bse1I ACTGG 1 cut(s) 425
Bse3DI GCAATG 1 cut(s) 339
BseDI CCNNGG 3 cut(s) 280, 387, 1148
BseGI GGATG 7 cut(s) 90, 140, 276, 576, 1124, 1341, 1397
BseLI CCNNNNNNNGG 1 cut(s) 196
BseMI GCAATG 1 cut(s) 339
BseMII CTCAG 3 cut(s) 109, 153, 1155
BseNI ACTGG 1 cut(s) 425
BseRI GAGGAG 2 cut(s) 26, 29
BseXI GCAGC 1 cut(s) 719
Bsh1285I CGRYCG 1 cut(s) 591
BshFI GGCC 2 cut(s) 251, 554
BsiEI CGRYCG 1 cut(s) 591
BsiSI CCGG 2 cut(s) 608, 1346
BslFI GGGAC 2 cut(s) 407, 541
BslI CCNNNNNNNGG 1 cut(s) 196
BsmAI GTCTC 2 cut(s) 158, 892
BsmFI GGGAC 2 cut(s) 407, 541
BsmI GAATGC 1 cut(s) 1127
BsnI GGCC 2 cut(s) 251, 554
Bsp143I GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
BspACI CCGC 7 cut(s) 141, 242, 261, 437, 544, 846, 1301
BspANI GGCC 2 cut(s) 251, 554
BspCNI CTCAG 3 cut(s) 108, 154, 1156
BspHI TCATGA 1 cut(s) 174
BspLI GGNNCC 4 cut(s) 220, 250, 423, 1021
BspOI GCTAGC 1 cut(s) 846
BspPI GGATC 5 cut(s) 913, 925, 1014, 1027, 1072
BsrDI GCAATG 1 cut(s) 339
BsrI ACTGG 1 cut(s) 425
BssECI CCNNGG 3 cut(s) 280, 387, 1148
BssMI GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
BssT1I CCWWGG 2 cut(s) 387, 1148
Bst4CI ACNGT 2 cut(s) 500, 532
BstAPI GCANNNNNTGC 1 cut(s) 473
BstBAI YACGTR 1 cut(s) 418
BstC8I GCNNGC 5 cut(s) 307, 332, 627, 844, 886
BstDEI CTNAG 4 cut(s) 95, 162, 674, 1164
BstF5I GGATG 7 cut(s) 90, 140, 276, 576, 1124, 1341, 1397
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 3 cut(s) 161, 467, 1277
BstKTI GATC 7 cut(s) 70, 591, 908, 933, 1022, 1080, 1170
BstMAI GTCTC 2 cut(s) 158, 892
BstMBI GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
BstMCI CGRYCG 1 cut(s) 591
BstMWI GCNNNNNNNGC 5 cut(s) 167, 248, 327, 411, 473
BstNSI RCATGY 3 cut(s) 309, 458, 772
BstV1I GCAGC 1 cut(s) 719
BstV2I GAAGAC 4 cut(s) 295, 352, 982, 1084
BstX2I RGATCY 2 cut(s) 1019, 1167
BstYI RGATCY 2 cut(s) 1019, 1167
BsuRI GGCC 2 cut(s) 251, 554
BtsCI GGATG 7 cut(s) 90, 140, 276, 576, 1124, 1341, 1397
BtsIMutI CAGTG 1 cut(s) 505
Cac8I GCNNGC 5 cut(s) 307, 332, 627, 844, 886
CaiI CAGNNNCTG 1 cut(s) 161
CciI TCATGA 1 cut(s) 174
CfoI GCGC 3 cut(s) 161, 467, 1277
Cfr13I GGNCC 2 cut(s) 249, 421
Csp6I GTAC 2 cut(s) 784, 1343
CspCI CAANNNNNGTGG 2 cut(s) 972, 1007
CviAII CATG 7 cut(s) 28, 175, 306, 455, 573, 769, 1221
CviQI GTAC 2 cut(s) 784, 1343
DdeI CTNAG 4 cut(s) 95, 162, 674, 1164
DpnI GATC 7 cut(s) 69, 590, 907, 932, 1021, 1079, 1169
DpnII GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
EaeI YGGCCR 1 cut(s) 552
Eco130I CCWWGG 2 cut(s) 387, 1148
Eco47I GGWCC 1 cut(s) 421
Eco57I CTGAAG 3 cut(s) 29, 109, 138
EcoO109I RGGNCCY 1 cut(s) 249
EcoT14I CCWWGG 2 cut(s) 387, 1148
EcoT22I ATGCAT 1 cut(s) 578
ErhI CCWWGG 2 cut(s) 387, 1148
FaeI CATG 7 cut(s) 31, 178, 309, 458, 576, 772, 1224
FalI AAGNNNNNCTT 6 cut(s) 27, 59, 344, 376, 1371, 1403
FaqI GGGAC 2 cut(s) 407, 541
FatI CATG 7 cut(s) 27, 174, 305, 454, 572, 768, 1220
FauI CCCGC 1 cut(s) 537
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 3 cut(s) 141, 708, 1302
FokI GGATG 7 cut(s) 77, 147, 263, 563, 1131, 1348, 1384
Fsp4HI GCNGC 3 cut(s) 141, 708, 1302
FspBI CTAG 3 cut(s) 756, 843, 1227
GlaI GCGC 3 cut(s) 160, 466, 1276
GluI GCNGC 3 cut(s) 141, 708, 1302
GsuI CTGGAG 1 cut(s) 858
HaeII RGCGCY 1 cut(s) 162
HaeIII GGCC 2 cut(s) 251, 554
HapII CCGG 2 cut(s) 608, 1346
HhaI GCGC 3 cut(s) 161, 467, 1277
Hin1II CATG 7 cut(s) 31, 178, 309, 458, 576, 772, 1224
Hin6I GCGC 3 cut(s) 159, 465, 1275
HinP1I GCGC 3 cut(s) 159, 465, 1275
HindIII AAGCTT 2 cut(s) 939, 1380
HinfI GANTC 4 cut(s) 399, 611, 746, 955
HpaII CCGG 2 cut(s) 608, 1346
HphI GGTGA 1 cut(s) 713
Hpy166II GTNNAC 2 cut(s) 1099, 1111
Hpy188III TCNNGA 5 cut(s) 175, 837, 928, 1070, 1240
Hpy8I GTNNAC 2 cut(s) 1099, 1111
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 4 cut(s) 29, 133, 172, 590
HpyCH4III ACNGT 2 cut(s) 500, 532
HpyCH4IV ACGT 3 cut(s) 296, 417, 1046
HpyCH4V TGCA 4 cut(s) 566, 576, 667, 1127
HpyF10VI GCNNNNNNNGC 5 cut(s) 167, 248, 327, 411, 473
HpyF3I CTNAG 4 cut(s) 95, 162, 674, 1164
HpySE526I ACGT 3 cut(s) 296, 417, 1046
Hsp92II CATG 7 cut(s) 31, 178, 309, 458, 576, 772, 1224
HspAI GCGC 3 cut(s) 159, 465, 1275
Kzo9I GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
LmnI GCTCC 3 cut(s) 224, 839, 1272
Lsp1109I GCAGC 1 cut(s) 719
LweI GCATC 4 cut(s) 58, 585, 676, 1326
MaeI CTAG 3 cut(s) 756, 843, 1227
MaeII ACGT 3 cut(s) 296, 417, 1046
MaeIII GTNAC 2 cut(s) 1047, 1244
MalI GATC 7 cut(s) 69, 590, 907, 932, 1021, 1079, 1169
MboI GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
MfeI CAATTG 2 cut(s) 266, 1203
MflI RGATCY 2 cut(s) 1019, 1167
MlyI GAGTC 1 cut(s) 408
MmeI TCCRAC 3 cut(s) 784, 985, 1288
MnlI CCTC 9 cut(s) 4, 7, 25, 104, 230, 290, 671, 1133, 1304
Mph1103I ATGCAT 1 cut(s) 578
MroXI GAANNNNTTC 3 cut(s) 39, 359, 382
MseI TTAA 4 cut(s) 537, 641, 815, 1214
MslI CAYNNNNRTG 1 cut(s) 459
MspA1I CMGCKG 3 cut(s) 143, 261, 710
MspI CCGG 2 cut(s) 608, 1346
MunI CAATTG 2 cut(s) 266, 1203
Mva1269I GAATGC 1 cut(s) 1127
MwoI GCNNNNNNNGC 5 cut(s) 167, 248, 327, 411, 473
NdeII GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
NheI GCTAGC 1 cut(s) 842
NlaIII CATG 7 cut(s) 31, 178, 309, 458, 576, 772, 1224
NlaIV GGNNCC 4 cut(s) 220, 250, 423, 1021
NmeAIII GCCGAG 1 cut(s) 261
NsiI ATGCAT 1 cut(s) 578
NspI RCATGY 3 cut(s) 309, 458, 772
PaeI GCATGC 1 cut(s) 309
PagI TCATGA 1 cut(s) 174
PciI ACATGT 2 cut(s) 454, 768
PctI GAATGC 1 cut(s) 1127
PdmI GAANNNNTTC 3 cut(s) 39, 359, 382
PfeI GAWTC 3 cut(s) 611, 746, 955
PkrI GCNGC 3 cut(s) 142, 709, 1303
Ple19I CGATCG 1 cut(s) 591
PleI GAGTC 1 cut(s) 407
PpsI GAGTC 1 cut(s) 407
Ppu21I YACGTR 1 cut(s) 418
PscI ACATGT 2 cut(s) 454, 768
PshBI ATTAAT 1 cut(s) 537
Psp1406I AACGTT 1 cut(s) 296
PspN4I GGNNCC 4 cut(s) 220, 250, 423, 1021
PspPI GGNCC 2 cut(s) 249, 421
PstNI CAGNNNCTG 1 cut(s) 161
PsuI RGATCY 2 cut(s) 1019, 1167
PvuI CGATCG 1 cut(s) 591
PvuII CAGCTG 1 cut(s) 710
RsaI GTAC 2 cut(s) 785, 1344
RsaNI GTAC 2 cut(s) 784, 1343
RseI CAYNNNNRTG 1 cut(s) 459
SaqAI TTAA 4 cut(s) 537, 641, 815, 1214
SatI GCNGC 3 cut(s) 141, 708, 1302
Sau3AI GATC 7 cut(s) 67, 588, 905, 930, 1019, 1077, 1167
Sau96I GGNCC 2 cut(s) 249, 421
SchI GAGTC 1 cut(s) 408
SfaNI GCATC 4 cut(s) 58, 585, 676, 1326
SinI GGWCC 1 cut(s) 421
SmiMI CAYNNNNRTG 1 cut(s) 459
SpeI ACTAGT 1 cut(s) 1226
SphI GCATGC 1 cut(s) 309
SsiI CCGC 7 cut(s) 141, 242, 261, 437, 544, 846, 1301
SspMI CTAG 3 cut(s) 756, 843, 1227
StyI CCWWGG 2 cut(s) 387, 1148
TaaI ACNGT 2 cut(s) 500, 532
TaiI ACGT 3 cut(s) 299, 420, 1049
TaqI TCGA 1 cut(s) 670
TatI WGTACW 1 cut(s) 783
TauI GCSGC 2 cut(s) 143, 1304
TfiI GAWTC 3 cut(s) 611, 746, 955
Tru1I TTAA 4 cut(s) 537, 641, 815, 1214
Tru9I TTAA 4 cut(s) 537, 641, 815, 1214
TscAI CASTG 1 cut(s) 505
TseI GCWGC 1 cut(s) 707
TspDTI ATGAA 3 cut(s) 191, 1073, 1312
TspGWI ACGGA 2 cut(s) 147, 626
TspRI CASTG 1 cut(s) 505
VpaK11BI GGWCC 1 cut(s) 421
VspI ATTAAT 1 cut(s) 537
XapI RAATTY 2 cut(s) 381, 714
XceI RCATGY 3 cut(s) 309, 458, 772
XmiI GTMKAC 1 cut(s) 1110
XmnI GAANNNNTTC 3 cut(s) 39, 359, 382
XspI CTAG 3 cut(s) 756, 843, 1227
Zsp2I ATGCAT 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.