AT1G08920

sugar transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
2867203 .. 2870745
3543 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08920.2

Sequence Viewer

Length: 1413 bp
ATGACGATGTCGGAGAACTCAAGAAACTTGGAAGCTGGTTTGCTACTGAGGAAGAACCAAAACGACATCAACGAATGTCGTATCACTGCTGTTGTACTTTTCAGTACTTTCGTTTCTGTTTGTGGCTCTTTCTGCTTCGGTTGTGCGGCAGGTTATTCATCAGTTGCTCAAACAGGGATCATAAATGATTTAGGTCTCTCTGTTGCACAATACTCCATGTTTGGTTCAATCATGACTTTTGGAGGAATGATTGGTGCCATCTTCAGCGGGAAAGTTGCAGATCTCATGGGTCGAAAAGGGACTATGTGGTTTGCTCAAATTTTCTGCATCTTCGGTTGGGTTGCAGTAGCATTAGCAAAAGACTCCATGTGGCTTGATATTGGAAGACTATCCACAGGATTTGCAGTTGGTTTATTAAGCTATGTGATACCAGTTTACATTGCAGAAATAACACCAAAACATGTTCGAGGAGCGTTTGTATTTGCTAATCAGCTGATGCAGAGTTGTGGATTGTCTTTATTCTACGTCATTGGAAATTTTGTTCATTGGCGTAACTTGGCCTTAATCGGTCTCATTCCATGTGCGTTGCAAGTTGTGACTTTGTTCTTTATTCCAGAGTCCCCTAGACTACTGGGAAAATGGGGACATGAAAAAGAATGTAGAGCTTCATTGCAAAGTCTTCGCGGAGATGATGCAGATATCTCTGAAGAAGCCAACACTATCAAAGAAACCATGATCTTGTTTGATGAAGGACCAAAATCGCGGGTTATGGATTTGTTTCAGAGAAGATATGCTCCATCTGTTGTTATTGGTGTGGGACTAATGCTTCTACAACAACTCTCTGGAAGCTCAGGACTTATGTACTATGTCGGTAGCGTATTTGATAAAGGAGGGTTTCCAAGCAGCATTGGCTCAATGATTCTTGCAGTGATCATGATACCAAAAGCTCTATTGGGTCTGATTTTGGTTGAGAAAATGGGACGAAGACCACTTCTATTGGCCTCTACCGGTGGAATGTGCTTTTTCAGCTTGCTCCTCAGTTTTTCCTTCTGCTTTCGGTCATATGGCATGCTTGATGAGCTCACTCCGATTTTCACATGTATCGGTGTAGTGGGTTTCATCTCTTCATTTGCCGTAGGCATGGGAGGCTTACCATGGATCATCATGTCTGAGATATTCCCAATGAATGTTAAAGTTTCTGCTGGGACTCTGGTTACCTTAGCCAACTGGTCCTTTGGTTGGATTGTTGCTTTCGCCTACAACTTCATGCTAGAGTGGAACGCATCAGGAACGTTCTTGATCTTCTTTACTATATGTGGTGCGGGTATAGTCTTTATTTATGCGATGGTACCCGAAACTAAAGGAAGAACATTGGAAGATATACAAGCTTCTCTTACAGATTTTCTACAATGA

Protein Analysis

470

Amino Acids

51.3

Weight (kDa)

6.81

Isoelectric Point (pI)

33.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 41 - 424 1.1e-20 Major Facilitator Superfamily
Sugar_tr PF00083 58 - 470 1.8e-70 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000401)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08920 AT1G08920 AT1G08920 AT3G05160 AT3G05160 AT3G05160 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT3G05165 AT5G27350 AT5G27360 AT5G27360 AT5G27360 AT5G27360 AT5G27360
fragaria_vesca FvH4_6g05021 FvH4_6g05050 FvH4_6g05051 FvH4_6g05051 FvH4_6g05060 FvH4_6g05061 FvH4_6g05090 FvH4_6g05090 FvH4_6g05090 FvH4_6g05111 FvH4_6g05111 FvH4_6g05120
malus_domestica MD12G1225600.v1.1 MD12G1225900.v1.1 MD12G1226400.v1.1
pyrus_communis pycom12g21050 pycom12g21080
rosa_chinensis RchiOBHm_Chr3g0453541 RchiOBHm_Chr3g0453551 RchiOBHm_Chr3g0453561 RchiOBHm_Chr3g0453571 RchiOBHm_Chr3g0453591 RchiOBHm_Chr3g0453601 RchiOBHm_Chr3g0453621 RchiOBHm_Chr3g0453651
rosa_laevigata RLG00000025501 RLG00000025504 RLG00000025505
rosa_multiflora Rmu_co8451765.1_g000001 Rmu_sc0000510.1_g000021 Rmu_sc0000510.1_g000022 Rmu_sc0000510.1_g000023 Rmu_sc0000510.1_g000027 Rmu_sc0003556.1_g000001 Rmu_sc0003556.1_g000003
rosa_roxburghii Rroxscaffold_5G00359890 Rroxscaffold_5G00359900 Rroxscaffold_6G00430520 Rroxscaffold_6G00430530 Rroxscaffold_6G00430540 Rroxscaffold_6G00430550 Rroxscaffold_6G00430570
rosa_rugosa Rorug02G0649800 Rorug02G0649900 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650000 Rorug02G0650100 Rorug02G0650200 Rorug02G0650300 Rorug02G0650400 Rorug02G0650500 Rorug04G0138300
rosa_samantha Rh3AG052800 Rh3AG052900 Rh3AG053000 Rh3AG053100 Rh3AG053200 Rh3AG053400 Rh3BG054300 Rh3BG054400 Rh3BG054500 Rh3BG054600 Rh3BG054700 Rh3BG054900 Rh3CG053600 Rh3CG053700 Rh3CG053800 Rh3CG053900 Rh3CG054100 Rh3DG054400 Rh3DG054500 Rh3DG054700 Rh3DG054800 Rh3DG055000 Rh3DG055200 Rh4DG197900
rosa_wichuraiana Rw3G004070 Rw3G004080 Rw3G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 140
Acc65I GGTACC 1 cut(s) 1348
AccB1I GGYRCC 2 cut(s) 254, 1348
AccII CGCG 2 cut(s) 684, 763
AciI CCGC 5 cut(s) 146, 267, 684, 763, 1322
AclI AACGTT 1 cut(s) 1292
AclWI GGATC 2 cut(s) 185, 1166
AcsI RAATTY 2 cut(s) 318, 535
AcuI CTGAAG 2 cut(s) 247, 726
AfaI GTAC 4 cut(s) 96, 106, 863, 1350
AfiI CCNNNNNNNGG 1 cut(s) 1239
AflIII ACRYGT 2 cut(s) 460, 1097
AgeI ACCGGT 1 cut(s) 1007
AgsI TTSAA 1 cut(s) 228
AloI GAACNNNNNNTCC 2 cut(s) 525, 557
AluBI AGCT 9 cut(s) 35, 420, 493, 665, 849, 947, 1029, 1081, 1388
AluI AGCT 9 cut(s) 35, 420, 493, 665, 849, 947, 1029, 1081, 1388
Alw21I GWGCWC 1 cut(s) 1083
Alw26I GTCTC 2 cut(s) 200, 575
AlwI GGATC 2 cut(s) 185, 1166
AoxI GGCC 2 cut(s) 558, 999
ApeKI GCWGC 1 cut(s) 903
ApoI RAATTY 2 cut(s) 318, 535
AsiGI ACCGGT 1 cut(s) 1007
Asp718I GGTACC 1 cut(s) 1348
AspS9I GGNCC 2 cut(s) 752, 1230
AvaII GGWCC 2 cut(s) 752, 1230
BanI GGYRCC 2 cut(s) 254, 1348
BanII GRGCYC 1 cut(s) 1083
BbsI GAAGAC 3 cut(s) 391, 671, 991
Bbv12I GWGCWC 1 cut(s) 1083
BbvI GCAGC 1 cut(s) 915
BccI CCATC 3 cut(s) 266, 805, 1339
BceAI ACGGC 1 cut(s) 1118
BcgI CGANNNNNNTGC 2 cut(s) 662, 696
BclI TGATCA 1 cut(s) 930
BcoDI GTCTC 2 cut(s) 200, 575
BfaI CTAG 2 cut(s) 624, 1271
BfuAI ACCTGC 1 cut(s) 140
BglII AGATCT 1 cut(s) 280
BisI GCNGC 2 cut(s) 147, 904
BlsI GCNGC 2 cut(s) 148, 905
BmcAI AGTACT 1 cut(s) 106
Bme18I GGWCC 2 cut(s) 752, 1230
BmgT120I GGNCC 2 cut(s) 752, 1230
BmiI GGNNCC 2 cut(s) 256, 1350
BmrI ACTGGG 1 cut(s) 641
BmsI GCATC 4 cut(s) 336, 486, 682, 1292
BmuI ACTGGG 1 cut(s) 641
BpiI GAAGAC 3 cut(s) 391, 671, 991
Bpu10I CCTNAGC 2 cut(s) 850, 1219
BpuEI CTTGAG 1 cut(s) 4
BsaI GGTCTC 2 cut(s) 200, 575
BsaJI CCNNGG 1 cut(s) 1154
BsaWI WCCGGW 1 cut(s) 1007
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bsc4I CCNNNNNNNGG 1 cut(s) 1239
Bse118I RCCGGY 1 cut(s) 1007
Bse1I ACTGG 3 cut(s) 431, 636, 1232
Bse3DI GCAATG 2 cut(s) 438, 668
BseDI CCNNGG 1 cut(s) 1154
BseLI CCNNNNNNNGG 1 cut(s) 1239
BseMI GCAATG 2 cut(s) 438, 668
BseMII CTCAG 4 cut(s) 38, 864, 1051, 1161
BseNI ACTGG 3 cut(s) 431, 636, 1232
BseRI GAGGAG 2 cut(s) 483, 1025
BseXI GCAGC 1 cut(s) 915
BseYI CCCAGC 1 cut(s) 1202
Bsh1236I CGCG 2 cut(s) 684, 763
BshFI GGCC 2 cut(s) 560, 1001
BshNI GGYRCC 2 cut(s) 254, 1348
BshTI ACCGGT 1 cut(s) 1007
BsiHKAI GWGCWC 1 cut(s) 1083
BsiSI CCGG 1 cut(s) 1008
BslFI GGGAC 6 cut(s) 313, 604, 657, 831, 993, 1219
BslI CCNNNNNNNGG 1 cut(s) 1239
BsmAI GTCTC 2 cut(s) 200, 575
BsmFI GGGAC 6 cut(s) 313, 604, 657, 831, 993, 1219
BsnI GGCC 2 cut(s) 560, 1001
Bso31I GGTCTC 2 cut(s) 200, 575
Bsp1286I GDGCHC 1 cut(s) 1083
Bsp143I GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
Bsp19I CCATGG 1 cut(s) 1154
BspACI CCGC 5 cut(s) 146, 267, 684, 763, 1322
BspANI GGCC 2 cut(s) 560, 1001
BspCNI CTCAG 4 cut(s) 39, 863, 1050, 1162
BspFNI CGCG 2 cut(s) 684, 763
BspHI TCATGA 2 cut(s) 231, 933
BspLI GGNNCC 2 cut(s) 256, 1350
BspMI ACCTGC 1 cut(s) 140
BspPI GGATC 2 cut(s) 185, 1166
BspT107I GGYRCC 2 cut(s) 254, 1348
BspTNI GGTCTC 2 cut(s) 200, 575
BsrDI GCAATG 2 cut(s) 438, 668
BsrFI RCCGGY 1 cut(s) 1007
BsrI ACTGG 3 cut(s) 431, 636, 1232
BssAI RCCGGY 1 cut(s) 1007
BssECI CCNNGG 1 cut(s) 1154
BssMI GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
BssT1I CCWWGG 1 cut(s) 1154
Bst6I CTCTTC 1 cut(s) 1129
BstC8I GCNNGC 2 cut(s) 1031, 1070
BstDEI CTNAG 5 cut(s) 47, 850, 1037, 1170, 1219
BstDSI CCRYGG 1 cut(s) 1154
BstEII GGTNACC 1 cut(s) 1213
BstFNI CGCG 2 cut(s) 684, 763
BstKTI GATC 6 cut(s) 180, 283, 738, 933, 1161, 1302
BstMAI GTCTC 2 cut(s) 200, 575
BstMBI GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
BstMWI GCNNNNNNNGC 5 cut(s) 132, 909, 1026, 1078, 1146
BstNSI RCATGY 3 cut(s) 464, 1072, 1101
BstPI GGTNACC 1 cut(s) 1213
BstUI CGCG 2 cut(s) 684, 763
BstV1I GCAGC 1 cut(s) 915
BstV2I GAAGAC 3 cut(s) 391, 671, 991
BstX2I RGATCY 1 cut(s) 280
BstYI RGATCY 1 cut(s) 280
BsuRI GGCC 2 cut(s) 560, 1001
BtgI CCRYGG 1 cut(s) 1154
BtgZI GCGATG 1 cut(s) 1358
BtsI GCAGTG 2 cut(s) 84, 933
BtsIMutI CAGTG 2 cut(s) 84, 933
BveI ACCTGC 1 cut(s) 140
Cac8I GCNNGC 2 cut(s) 1031, 1070
CciI TCATGA 2 cut(s) 231, 933
Cfr10I RCCGGY 1 cut(s) 1007
Cfr13I GGNCC 2 cut(s) 752, 1230
Csp6I GTAC 4 cut(s) 95, 105, 862, 1349
CspAI ACCGGT 1 cut(s) 1007
CspCI CAANNNNNGTGG 4 cut(s) 382, 417, 978, 1013
CviQI GTAC 4 cut(s) 95, 105, 862, 1349
DdeI CTNAG 5 cut(s) 47, 850, 1037, 1170, 1219
DpnI GATC 6 cut(s) 179, 282, 737, 932, 1160, 1301
DpnII GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
Eam1104I CTCTTC 1 cut(s) 1129
EarI CTCTTC 1 cut(s) 1129
Ecl136II GAGCTC 1 cut(s) 1081
Eco130I CCWWGG 1 cut(s) 1154
Eco24I GRGCYC 1 cut(s) 1083
Eco31I GGTCTC 2 cut(s) 200, 575
Eco32I GATATC 1 cut(s) 700
Eco47I GGWCC 2 cut(s) 752, 1230
Eco53kI GAGCTC 1 cut(s) 1081
Eco57I CTGAAG 2 cut(s) 247, 726
Eco91I GGTNACC 1 cut(s) 1213
EcoICRI GAGCTC 1 cut(s) 1081
EcoO65I GGTNACC 1 cut(s) 1213
EcoRV GATATC 1 cut(s) 700
EcoT14I CCWWGG 1 cut(s) 1154
EcoT38I GRGCYC 1 cut(s) 1083
ErhI CCWWGG 1 cut(s) 1154
FalI AAGNNNNNCTT 2 cut(s) 1377, 1409
FaqI GGGAC 6 cut(s) 313, 604, 657, 831, 993, 1219
FauI CCCGC 3 cut(s) 260, 756, 1315
FauNDI CATATG 1 cut(s) 1063
FbaI TGATCA 1 cut(s) 930
Fnu4HI GCNGC 2 cut(s) 147, 904
FriOI GRGCYC 1 cut(s) 1083
Fsp4HI GCNGC 2 cut(s) 147, 904
FspBI CTAG 2 cut(s) 624, 1271
GluI GCNGC 2 cut(s) 147, 904
GsaI CCCAGC 1 cut(s) 1206
HaeIII GGCC 2 cut(s) 560, 1001
HapII CCGG 1 cut(s) 1008
HindIII AAGCTT 1 cut(s) 1386
HinfI GANTC 4 cut(s) 362, 617, 919, 1207
HpaII CCGG 1 cut(s) 1008
Hpy166II GTNNAC 1 cut(s) 436
Hpy188I TCNGA 6 cut(s) 13, 706, 783, 960, 1089, 1171
Hpy188III TCNNGA 8 cut(s) 21, 232, 614, 843, 852, 934, 1287, 1297
Hpy8I GTNNAC 1 cut(s) 436
HpyAV CCTTC 2 cut(s) 743, 1057
HpyCH4IV ACGT 2 cut(s) 525, 1292
HpyF10VI GCNNNNNNNGC 5 cut(s) 132, 909, 1026, 1078, 1146
HpyF3I CTNAG 5 cut(s) 47, 850, 1037, 1170, 1219
HpySE526I ACGT 2 cut(s) 525, 1292
KpnI GGTACC 1 cut(s) 1352
Ksp22I TGATCA 1 cut(s) 930
Kzo9I GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
LmnI GCTCC 3 cut(s) 470, 799, 1038
Lsp1109I GCAGC 1 cut(s) 915
LweI GCATC 4 cut(s) 336, 486, 682, 1292
MaeI CTAG 2 cut(s) 624, 1271
MaeII ACGT 2 cut(s) 525, 1292
MaeIII GTNAC 3 cut(s) 551, 595, 1213
MalI GATC 6 cut(s) 179, 282, 737, 932, 1160, 1301
MboI GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
MflI RGATCY 1 cut(s) 280
MhlI GDGCHC 1 cut(s) 1083
MluCI AATT 2 cut(s) 318, 535
MlyI GAGTC 3 cut(s) 356, 626, 1201
MmeI TCCRAC 1 cut(s) 1220
MnlI CCTC 7 cut(s) 42, 236, 461, 884, 1012, 1046, 1139
MseI TTAA 3 cut(s) 416, 563, 1191
MspA1I CMGCKG 2 cut(s) 267, 493
MspI CCGG 1 cut(s) 1008
MvnI CGCG 2 cut(s) 684, 763
MwoI GCNNNNNNNGC 5 cut(s) 132, 909, 1026, 1078, 1146
NcoI CCATGG 1 cut(s) 1154
NdeI CATATG 1 cut(s) 1063
NdeII GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
NlaIV GGNNCC 2 cut(s) 256, 1350
NmuCI GTSAC 1 cut(s) 595
NspI RCATGY 3 cut(s) 464, 1072, 1101
PaeI GCATGC 1 cut(s) 1072
PagI TCATGA 2 cut(s) 231, 933
PciI ACATGT 2 cut(s) 460, 1097
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PfeI GAWTC 1 cut(s) 919
PflFI GACNNNGTC 1 cut(s) 7
PinAI ACCGGT 1 cut(s) 1007
PkrI GCNGC 2 cut(s) 148, 905
PleI GAGTC 3 cut(s) 356, 625, 1201
PpsI GAGTC 3 cut(s) 356, 625, 1201
PscI ACATGT 2 cut(s) 460, 1097
Psp124BI GAGCTC 1 cut(s) 1083
Psp1406I AACGTT 1 cut(s) 1292
PspEI GGTNACC 1 cut(s) 1213
PspFI CCCAGC 1 cut(s) 1202
PspN4I GGNNCC 2 cut(s) 256, 1350
PspPI GGNCC 2 cut(s) 752, 1230
PsuI RGATCY 1 cut(s) 280
PsyI GACNNNGTC 1 cut(s) 7
PvuII CAGCTG 1 cut(s) 493
RsaI GTAC 4 cut(s) 96, 106, 863, 1350
RsaNI GTAC 4 cut(s) 95, 105, 862, 1349
SacI GAGCTC 1 cut(s) 1083
SaqAI TTAA 3 cut(s) 416, 563, 1191
SatI GCNGC 2 cut(s) 147, 904
Sau3AI GATC 6 cut(s) 177, 280, 735, 930, 1158, 1299
Sau96I GGNCC 2 cut(s) 752, 1230
ScaI AGTACT 1 cut(s) 106
SchI GAGTC 3 cut(s) 356, 626, 1201
SduI GDGCHC 1 cut(s) 1083
SfaNI GCATC 4 cut(s) 336, 486, 682, 1292
SinI GGWCC 2 cut(s) 752, 1230
SmlI CTYRAG 1 cut(s) 19
SmoI CTYRAG 1 cut(s) 19
SphI GCATGC 1 cut(s) 1072
Sse9I AATT 2 cut(s) 318, 535
SsiI CCGC 5 cut(s) 146, 267, 684, 763, 1322
SspMI CTAG 2 cut(s) 624, 1271
SstI GAGCTC 1 cut(s) 1083
StyI CCWWGG 1 cut(s) 1154
TaiI ACGT 2 cut(s) 528, 1295
TaqI TCGA 2 cut(s) 292, 466
TaqII GACCGA 2 cut(s) 557, 1047
TasI AATT 2 cut(s) 318, 535
TatI WGTACW 3 cut(s) 94, 104, 861
TauI GCSGC 1 cut(s) 149
TfiI GAWTC 1 cut(s) 919
Tru1I TTAA 3 cut(s) 416, 563, 1191
Tru9I TTAA 3 cut(s) 416, 563, 1191
TscAI CASTG 2 cut(s) 91, 933
TseFI GTSAC 1 cut(s) 595
TseI GCWGC 1 cut(s) 903
Tsp45I GTSAC 1 cut(s) 595
TspDTI ATGAA 9 cut(s) 147, 533, 657, 663, 762, 1108, 1116, 1199, 1255
TspRI CASTG 2 cut(s) 91, 933
Tth111I GACNNNGTC 1 cut(s) 7
VpaK11BI GGWCC 2 cut(s) 752, 1230
XapI RAATTY 2 cut(s) 318, 535
XceI RCATGY 3 cut(s) 464, 1072, 1101
XspI CTAG 2 cut(s) 624, 1271
ZrmI AGTACT 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.