Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0001738

Physical Location & Seq

Genomic Coordinates Forward (+)

3699795 .. 3702056

Gene Structure 2262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG054200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGAAGATCTCATTTCACTCCCAAATGTCTCTCTTCCAATTCCTCCTTCTTGGATTAAGCTTAGGTTTTGCCAATTCCATAACCATTAACAATGAAACCTCTGCACATAGAAATCTGGTTACCAATCCTATGTGTCCATGGGACACAGATTCCCTCCAAAAACTCGTCACCCAAAACGATCTCCCATTTCCATTACAGGACATCTCCACTGAATGCCAGTACATGCTTCAAGGAATTCGTCTCCTCCGATCCGATTATCTCCGAACCAACGGCTCCTTTTCTCTGCCTCCAAATGTCTTAGAGGCCTGCTGGGATTCATATGAACATTTAGTCCACCAATTCATTCCGGGATTCAATATCAGATTCAGTTGCCGCTACAAGACCAACTTCATTTCCGAGACTTGTATGAACATTACAAGTAGATCCGATTTTGAAAATTTGGTTCCATCCTCCCAGTTGCAGCAAATTAAGTCCTCTTGTGACCAGTCTCTGAAGACCGATTCGGCTTGTGCTTCTTGTGTGGATAGCTTGAGTAGTGTCAGATCCTCTTACTGGAAAGGATCAGATGATGGGAATGTTGAAGATTGTAAAGGGTACCTTTATATATATGCTGCAGCTTTTGCTAACAGGTTTGGACCAACTGACATAGGCACTGCAAAGTGTTTGTTCTTGCTTGATTTTAGTTCAGCTAGTCCCAAGTCCAAGGACACGAATGCAGTGATGTGGGGAATTTTGTCTGGTTGTGTCGATGGTTTTGTTGCGGCACTTGTGGTGGTTTGGTTTCTTTGGATGTGGCACAAGAAATGGAGGAAGAAGAGGAGAGAAAACTTGGCTCGAGTCGAGGTAGTGCCAGATATCGAGAGTGGTACTAATTCGTCATCGTTGAAGTTCAGTTTTGAAGAAATTCGAAAGGCTGCAGGGAATTTCTCAAGAGAGAACATAGTTGGTATGGGTGCATATGGCAATGTCTACAAGGGGGTGTTACCAGATGGTTCTGAAGTTGCACTGAAAAGGTTCAAGAACTGTTCTGCTGCTGGAGACCAAGTTTTTGCACATGAAGTTGAGGTCATTGCTAGTGTTAGGCATGTGAACCTTGTAGCGTTACTAGGCTATTGCACCACGACGGTGCCAAGAGAAGGGCATCAGAGAATAATAGCTTGTGATTTGATGAGAAATGGAAGCCTGTATCAGCACCTTTTTCAACCAGGATTCAAGAAGTTAACTTGGCCTATTCGACAAAAGATTGTGCTAGGAATGGCTCGCGGGTTGGCCTATTTGCACTATGGAGTTCAGCCTGCAATAATTCACAGAGACATCAAAGCGAGCAATGTACTTCTAGACGAAGCATTTGAGGCAAAACTAGCTGATTTCGGGCTTGCAAAGTTCACACCGGAGGGACAGACACACGTGAGCACAAGAGTAGCCGGGACACTTGGATATGTTGCTCCCGAGTATGCTTTGTATGGGCAGTTATCCGAAAGAATCGATGTGTATGGCTTCGGGGTTGTACTTCTTGAGCTTTTGAGTGGGAAGAAAGCAGTTGTGGAAGTTCTTGATGACAATAGGCCTTTGTTGTTAGCAGATTGGGCATGGTCACAAGTTAGGGAAGGTGGAGCTTTGGGTGTTATTGATGAAGGGATGCCAGAGTCGGGTGTACCAGAAGTGTTGGAGAAGTATGTTTTGGTTGCGGTGCTTTGCTCTCATCCTATAGCACATGCTAGGCCAACAATGGATCACATTGTGAAAATACTTGAAAATGATGCTACTCCAGTTCCCTCTATTCAAGATAGGCCTTTTTCTCTTTTAGCACAAATGGATGATACCGAGAGATCAACAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

613

Amino Acids

68.17

Weight (kDa)

6.23

Isoelectric Point (pI)

40.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	43 - 197	1e-30	SPARK
Pkinase	PF00069	310 - 513	1.1e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	312 - 582	3.7e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48010
fragaria_vesca	FvH4_2g24291 FvH4_2g24291 FvH4_6g05000 FvH4_6g05020
malus_domestica	MD03G1272600.v1.1 MD04G1211500.v1.1 MD11G1293500.v1.1 MD12G1226500.v1.1
prunus_persica	Prupe.6G332100_v2.0.a1 Prupe.6G332200_v2.0.a1 Prupe.8G248800_v2.0.a1
pyrus_communis	pycom03g21710 pycom11g25970
rosa_chinensis	RchiOBHm_Chr3g0453511 RchiOBHm_Chr3g0453521 RchiOBHm_Chr5g0002211 RchiOBHm_Chr6g0292151
rosa_laevigata	RLG00000012057 RLG00000025506 RLG00000025507 RLG00000031008
rosa_multiflora	Rmu_co8460761.1_g000001 Rmu_sc0000510.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073750 Rroxscaffold_2G00125960 Rroxscaffold_6G00430490 Rroxscaffold_7G00175400
rosa_rugosa	Rorug02G0649700 Rorug02G0649800 Rorug06G0223800
rosa_samantha	Rh1BG359400 Rh3AG052600 Rh3AG052700 Rh3BG054100 Rh3BG054200 Rh3CG053400 Rh3CG053500 Rh3DG054200 Rh3DG054300 Rh6AG337200 Rh6BG344400 Rh6CG351200 Rh6DG337400 Rh7BG191800
rosa_wichuraiana	Rw3G004050 Rw3G004060 Rw6G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	594
AccB1I	GGYRCC	2 cut(s)	594, 1126
AccI	GTMKAC	1 cut(s)	969
AccII	CGCG	1 cut(s)	1263
AciI	CCGC	4 cut(s)	373, 761, 1263, 1688
AclWI	GGATC	5 cut(s)	243, 417, 537, 568, 1740
AcsI	RAATTY	5 cut(s)	234, 436, 729, 903, 922
AcuI	CTGAAG	2 cut(s)	512, 1017
AcvI	CACGTG	1 cut(s)	1408
AdeI	CACNNNGTG	1 cut(s)	1741
AfaI	GTAC	6 cut(s)	221, 596, 868, 1332, 1509, 1656
AfiI	CCNNNNNNNGG	3 cut(s)	552, 1136, 1649
AflIII	ACRYGT	1 cut(s)	1405
AjnI	CCWGG	1 cut(s)	1204
AjuI	GAANNNNNNNTTGG	4 cut(s)	30, 62, 1664, 1696
AleI	CACNNNNGTG	1 cut(s)	1124
AloI	GAACNNNNNNTCC	2 cut(s)	315, 347
AluBI	AGCT	9 cut(s)	60, 528, 617, 689, 1157, 1364, 1519, 1616, 1839
AluI	AGCT	9 cut(s)	60, 528, 617, 689, 1157, 1364, 1519, 1616, 1839
Alw21I	GWGCWC	1 cut(s)	1415
Alw26I	GTCTC	6 cut(s)	33, 245, 392, 492, 1032, 1305
AlwI	GGATC	5 cut(s)	243, 417, 537, 568, 1740
AlwNI	CAGNNNCTG	1 cut(s)	490
Ama87I	CYCGRG	2 cut(s)	834, 1448
AoxI	GGCC	6 cut(s)	303, 1226, 1269, 1565, 1721, 1790
ApeKI	GCWGC	5 cut(s)	460, 611, 614, 914, 1031
ApoI	RAATTY	5 cut(s)	234, 436, 729, 903, 922
ArsI	GACNNNNNNTTYG	4 cut(s)	1031, 1063, 1331, 1363
Asp700I	GAANNNNTTC	2 cut(s)	903, 1013
Asp718I	GGTACC	1 cut(s)	594
AspS9I	GGNCC	1 cut(s)	635
AsuC2I	CCSGG	2 cut(s)	348, 1426
AsuHPI	GGTGA	1 cut(s)	160
AsuII	TTCGAA	1 cut(s)	907
AvaI	CYCGRG	2 cut(s)	834, 1448
AvaII	GGWCC	1 cut(s)	635
BanI	GGYRCC	2 cut(s)	594, 1126
BbrPI	CACGTG	1 cut(s)	1408
BbsI	GAAGAC	1 cut(s)	500
Bbv12I	GWGCWC	1 cut(s)	1415
BbvI	GCAGC	5 cut(s)	472, 598, 626, 901, 1018
BccI	CCATC	4 cut(s)	454, 563, 743, 983
BceAI	ACGGC	1 cut(s)	286
BciT130I	CCWGG	1 cut(s)	1206
BcnI	CCSGG	2 cut(s)	348, 1426
BcoDI	GTCTC	6 cut(s)	33, 245, 392, 492, 1032, 1305
BfaI	CTAG	8 cut(s)	690, 1074, 1106, 1250, 1337, 1361, 1719, 1840
BfmI	CTRYAG	3 cut(s)	612, 915, 1707
BglII	AGATCT	1 cut(s)	6
BisI	GCNGC	7 cut(s)	373, 461, 612, 615, 762, 915, 1032
BlsI	GCNGC	7 cut(s)	374, 462, 613, 616, 763, 916, 1033
Bme1390I	CCNGG	3 cut(s)	348, 1206, 1426
Bme18I	GGWCC	1 cut(s)	635
BmeT110I	CYCGRG	2 cut(s)	834, 1448
BmgT120I	GGNCC	1 cut(s)	635
BmiI	GGNNCC	4 cut(s)	274, 444, 596, 1128
BmrFI	CCNGG	3 cut(s)	348, 1206, 1426
BmrI	ACTGGG	1 cut(s)	448
BmsI	GCATC	3 cut(s)	1150, 1629, 1750
BmuI	ACTGGG	1 cut(s)	448
BpiI	GAAGAC	1 cut(s)	500
BpmI	CTGGAG	2 cut(s)	1056, 1752
Bpu10I	CCTNAGC	1 cut(s)	61
Bpu14I	TTCGAA	1 cut(s)	907
BpuEI	CTTGAG	3 cut(s)	550, 913, 1535
BpuMI	CCSGG	2 cut(s)	348, 1426
Bsa29I	ATCGAT	1 cut(s)	1485
BsaAI	YACGTR	1 cut(s)	1408
BsaI	GGTCTC	1 cut(s)	1032
BsaJI	CCNNGG	2 cut(s)	137, 702
BsaWI	WCCGGW	1 cut(s)	1390
BsaXI	ACNNNNNCTCC	2 cut(s)	1029, 1059
Bsc4I	CCNNNNNNNGG	3 cut(s)	552, 1136, 1649
Bse1I	ACTGG	5 cut(s)	217, 454, 484, 557, 1769
Bse3DI	GCAATG	3 cut(s)	970, 1068, 1333
BseBI	CCWGG	1 cut(s)	1206
BseCI	ATCGAT	1 cut(s)	1485
BseDI	CCNNGG	2 cut(s)	137, 702
BseGI	GGATG	5 cut(s)	446, 795, 1644, 1702, 1822
BseLI	CCNNNNNNNGG	3 cut(s)	552, 1136, 1649
BseMI	GCAATG	3 cut(s)	970, 1068, 1333
BseNI	ACTGG	5 cut(s)	217, 454, 484, 557, 1769
BseRI	GAGGAG	2 cut(s)	233, 832
BseXI	GCAGC	5 cut(s)	472, 598, 626, 901, 1018
BseYI	CCCAGC	1 cut(s)	309
BsgI	GTGCAG	1 cut(s)	87
Bsh1236I	CGCG	1 cut(s)	1263
BshFI	GGCC	6 cut(s)	305, 1228, 1271, 1567, 1723, 1792
BshNI	GGYRCC	2 cut(s)	594, 1126
BshVI	ATCGAT	1 cut(s)	1485
BsiHKAI	GWGCWC	1 cut(s)	1415
BsiHKCI	CYCGRG	2 cut(s)	834, 1448
BsiSI	CCGG	3 cut(s)	347, 1391, 1425
BslFI	GGGAC	4 cut(s)	155, 678, 1410, 1441
BslI	CCNNNNNNNGG	3 cut(s)	552, 1136, 1649
BsmAI	GTCTC	6 cut(s)	33, 245, 392, 492, 1032, 1305
BsmBI	CGTCTC	1 cut(s)	245
BsmFI	GGGAC	4 cut(s)	155, 678, 1410, 1441
BsmI	GAATGC	2 cut(s)	218, 718
BsnI	GGCC	6 cut(s)	305, 1228, 1271, 1567, 1723, 1792
Bso31I	GGTCTC	1 cut(s)	1032
BsoBI	CYCGRG	2 cut(s)	834, 1448
Bsp119I	TTCGAA	1 cut(s)	907
Bsp1286I	GDGCHC	1 cut(s)	1415
Bsp143I	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
Bsp19I	CCATGG	1 cut(s)	137
BspACI	CCGC	4 cut(s)	373, 761, 1263, 1688
BspANI	GGCC	6 cut(s)	305, 1228, 1271, 1567, 1723, 1792
BspDI	ATCGAT	1 cut(s)	1485
BspFNI	CGCG	1 cut(s)	1263
BspLI	GGNNCC	4 cut(s)	274, 444, 596, 1128
BspMAI	CTGCAG	2 cut(s)	616, 919
BspPI	GGATC	5 cut(s)	243, 417, 537, 568, 1740
BspT104I	TTCGAA	1 cut(s)	907
BspT107I	GGYRCC	2 cut(s)	594, 1126
BspTNI	GGTCTC	1 cut(s)	1032
BsrDI	GCAATG	3 cut(s)	970, 1068, 1333
BsrI	ACTGG	5 cut(s)	217, 454, 484, 557, 1769
BssECI	CCNNGG	2 cut(s)	137, 702
BssMI	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
BssT1I	CCWWGG	2 cut(s)	137, 702
Bst2UI	CCWGG	1 cut(s)	1206
Bst4CI	ACNGT	2 cut(s)	1025, 1126
Bst6I	CTCTTC	2 cut(s)	38, 809
BstAPI	GCANNNNNTGC	1 cut(s)	620
BstBAI	YACGTR	1 cut(s)	1408
BstBI	TTCGAA	1 cut(s)	907
BstC8I	GCNNGC	5 cut(s)	307, 1261, 1296, 1324, 1377
BstDEI	CTNAG	2 cut(s)	61, 298
BstDSI	CCRYGG	1 cut(s)	137
BstEII	GGTNACC	1 cut(s)	118
BstF5I	GGATG	5 cut(s)	446, 795, 1644, 1702, 1822
BstFNI	CGCG	1 cut(s)	1263
BstKTI	GATC	8 cut(s)	9, 181, 251, 425, 545, 563, 1735, 1832
BstMAI	GTCTC	6 cut(s)	33, 245, 392, 492, 1032, 1305
BstMBI	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
BstMWI	GCNNNNNNNGC	4 cut(s)	620, 1352, 1361, 1586
BstNI	CCWGG	1 cut(s)	1206
BstNSI	RCATGY	3 cut(s)	226, 1088, 1718
BstPI	GGTNACC	1 cut(s)	118
BstSCI	CCNGG	3 cut(s)	346, 1204, 1424
BstSFI	CTRYAG	3 cut(s)	612, 915, 1707
BstUI	CGCG	1 cut(s)	1263
BstV1I	GCAGC	5 cut(s)	472, 598, 626, 901, 1018
BstV2I	GAAGAC	1 cut(s)	500
BstX2I	RGATCY	3 cut(s)	6, 422, 542
BstYI	RGATCY	3 cut(s)	6, 422, 542
Bsu15I	ATCGAT	1 cut(s)	1485
BsuRI	GGCC	6 cut(s)	305, 1228, 1271, 1567, 1723, 1792
BsuTUI	ATCGAT	1 cut(s)	1485
BtgI	CCRYGG	1 cut(s)	137
BtsCI	GGATG	5 cut(s)	446, 795, 1644, 1702, 1822
BtsI	GCAGTG	2 cut(s)	651, 723
BtsIMutI	CAGTG	4 cut(s)	207, 651, 723, 1004
Cac8I	GCNNGC	5 cut(s)	307, 1261, 1296, 1324, 1377
CaiI	CAGNNNCTG	1 cut(s)	490
Cfr13I	GGNCC	1 cut(s)	635
ClaI	ATCGAT	1 cut(s)	1485
Csp6I	GTAC	6 cut(s)	220, 595, 867, 1331, 1508, 1655
CviAII	CATG	6 cut(s)	138, 223, 1055, 1085, 1590, 1715
CviQI	GTAC	6 cut(s)	220, 595, 867, 1331, 1508, 1655
DdeI	CTNAG	2 cut(s)	61, 298
DpnI	GATC	8 cut(s)	8, 180, 250, 424, 544, 562, 1734, 1831
DpnII	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
DraIII	CACNNNGTG	1 cut(s)	1741
Eam1104I	CTCTTC	2 cut(s)	38, 809
EarI	CTCTTC	2 cut(s)	38, 809
Eco130I	CCWWGG	2 cut(s)	137, 702
Eco147I	AGGCCT	3 cut(s)	305, 1567, 1792
Eco31I	GGTCTC	1 cut(s)	1032
Eco32I	GATATC	1 cut(s)	856
Eco47I	GGWCC	1 cut(s)	635
Eco57I	CTGAAG	2 cut(s)	512, 1017
Eco72I	CACGTG	1 cut(s)	1408
Eco88I	CYCGRG	2 cut(s)	834, 1448
Eco91I	GGTNACC	1 cut(s)	118
EcoO65I	GGTNACC	1 cut(s)	118
EcoRI	GAATTC	1 cut(s)	234
EcoRII	CCWGG	1 cut(s)	1204
EcoRV	GATATC	1 cut(s)	856
EcoT14I	CCWWGG	2 cut(s)	137, 702
ErhI	CCWWGG	2 cut(s)	137, 702
Esp3I	CGTCTC	1 cut(s)	245
FaeI	CATG	6 cut(s)	141, 226, 1058, 1088, 1593, 1718
FalI	AAGNNNNNCTT	4 cut(s)	371, 403, 582, 614
FaqI	GGGAC	4 cut(s)	155, 678, 1410, 1441
FatI	CATG	6 cut(s)	137, 222, 1054, 1084, 1589, 1714
FauI	CCCGC	1 cut(s)	1256
FauNDI	CATATG	2 cut(s)	319, 958
FblI	GTMKAC	1 cut(s)	969
Fnu4HI	GCNGC	7 cut(s)	373, 461, 612, 615, 762, 915, 1032
FokI	GGATG	5 cut(s)	433, 802, 1651, 1689, 1829
Fsp4HI	GCNGC	7 cut(s)	373, 461, 612, 615, 762, 915, 1032
FspBI	CTAG	8 cut(s)	690, 1074, 1106, 1250, 1337, 1361, 1719, 1840
GluI	GCNGC	7 cut(s)	373, 461, 612, 615, 762, 915, 1032
GsaI	CCCAGC	1 cut(s)	313
GsuI	CTGGAG	2 cut(s)	1056, 1752
HaeIII	GGCC	6 cut(s)	305, 1228, 1271, 1567, 1723, 1792
HapII	CCGG	3 cut(s)	347, 1391, 1425
Hin1II	CATG	6 cut(s)	141, 226, 1058, 1088, 1593, 1718
HincII	GTYRAC	1 cut(s)	1221
HindII	GTYRAC	1 cut(s)	1221
HindIII	AAGCTT	1 cut(s)	58
HinfI	GANTC	9 cut(s)	149, 314, 351, 363, 500, 837, 1209, 1482, 1646
HpaI	GTTAAC	1 cut(s)	1221
HpaII	CCGG	3 cut(s)	347, 1391, 1425
HphI	GGTGA	1 cut(s)	160
Hpy166II	GTNNAC	6 cut(s)	334, 970, 1090, 1221, 1386, 1655
Hpy188III	TCNNGA	9 cut(s)	859, 930, 1018, 1213, 1337, 1448, 1514, 1553, 1784
Hpy8I	GTNNAC	6 cut(s)	334, 970, 1090, 1221, 1386, 1655
Hpy99I	CGWCG	1 cut(s)	1126
HpyAV	CCTTC	4 cut(s)	56, 1130, 1601, 1628
HpyCH4III	ACNGT	2 cut(s)	1025, 1126
HpyCH4IV	ACGT	1 cut(s)	1407
HpyF10VI	GCNNNNNNNGC	4 cut(s)	620, 1352, 1361, 1586
HpyF3I	CTNAG	2 cut(s)	61, 298
HpySE526I	ACGT	1 cut(s)	1407
Hsp92II	CATG	6 cut(s)	141, 226, 1058, 1088, 1593, 1718
KpnI	GGTACC	1 cut(s)	598
KspAI	GTTAAC	1 cut(s)	1221
Kzo9I	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
LmnI	GCTCC	3 cut(s)	278, 1450, 1613
Lsp1109I	GCAGC	5 cut(s)	472, 598, 626, 901, 1018
LweI	GCATC	3 cut(s)	1150, 1629, 1750
MaeI	CTAG	8 cut(s)	690, 1074, 1106, 1250, 1337, 1361, 1719, 1840
MaeII	ACGT	1 cut(s)	1407
MaeIII	GTNAC	6 cut(s)	118, 166, 479, 981, 1101, 1593
MalI	GATC	8 cut(s)	8, 180, 250, 424, 544, 562, 1734, 1831
MboI	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
MboII	GAAGA	8 cut(s)	16, 25, 505, 593, 823, 826, 911, 1543
MflI	RGATCY	3 cut(s)	6, 422, 542
MhlI	GDGCHC	1 cut(s)	1415
MlyI	GAGTC	2 cut(s)	846, 1655
MmeI	TCCRAC	1 cut(s)	1647
MroXI	GAANNNNTTC	2 cut(s)	903, 1013
MseI	TTAA	4 cut(s)	56, 87, 468, 1220
MslI	CAYNNNNRTG	1 cut(s)	1124
MspI	CCGG	3 cut(s)	347, 1391, 1425
MspR9I	CCNGG	3 cut(s)	348, 1206, 1426
Mva1269I	GAATGC	2 cut(s)	218, 718
MvaI	CCWGG	1 cut(s)	1206
MvnI	CGCG	1 cut(s)	1263
MwoI	GCNNNNNNNGC	4 cut(s)	620, 1352, 1361, 1586
NciI	CCSGG	2 cut(s)	348, 1426
NcoI	CCATGG	1 cut(s)	137
NdeI	CATATG	2 cut(s)	319, 958
NdeII	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
NlaIII	CATG	6 cut(s)	141, 226, 1058, 1088, 1593, 1718
NlaIV	GGNNCC	4 cut(s)	274, 444, 596, 1128
NmuCI	GTSAC	3 cut(s)	166, 479, 1593
NspI	RCATGY	3 cut(s)	226, 1088, 1718
NspV	TTCGAA	1 cut(s)	907
OliI	CACNNNNGTG	1 cut(s)	1124
PaeR7I	CTCGAG	1 cut(s)	834
PceI	AGGCCT	3 cut(s)	305, 1567, 1792
PcsI	WCGNNNNNNNCGW	1 cut(s)	244
PctI	GAATGC	2 cut(s)	218, 718
PdmI	GAANNNNTTC	2 cut(s)	903, 1013
PfeI	GAWTC	7 cut(s)	149, 314, 351, 363, 500, 1209, 1482
PfoI	TCCNGGA	1 cut(s)	346
PkrI	GCNGC	7 cut(s)	374, 462, 613, 616, 763, 916, 1033
PleI	GAGTC	2 cut(s)	845, 1654
PmaCI	CACGTG	1 cut(s)	1408
PmlI	CACGTG	1 cut(s)	1408
PpsI	GAGTC	2 cut(s)	845, 1654
Ppu21I	YACGTR	1 cut(s)	1408
Psp6I	CCWGG	1 cut(s)	1204
PspCI	CACGTG	1 cut(s)	1408
PspEI	GGTNACC	1 cut(s)	118
PspFI	CCCAGC	1 cut(s)	309
PspGI	CCWGG	1 cut(s)	1204
PspN4I	GGNNCC	4 cut(s)	274, 444, 596, 1128
PspPI	GGNCC	1 cut(s)	635
PspXI	VCTCGAGB	1 cut(s)	834
PstI	CTGCAG	2 cut(s)	616, 919
PstNI	CAGNNNCTG	1 cut(s)	490
PsuI	RGATCY	3 cut(s)	6, 422, 542
RsaI	GTAC	6 cut(s)	221, 596, 868, 1332, 1509, 1656
RsaNI	GTAC	6 cut(s)	220, 595, 867, 1331, 1508, 1655
RseI	CAYNNNNRTG	1 cut(s)	1124
SaqAI	TTAA	4 cut(s)	56, 87, 468, 1220
SatI	GCNGC	7 cut(s)	373, 461, 612, 615, 762, 915, 1032
Sau3AI	GATC	8 cut(s)	6, 178, 248, 422, 542, 560, 1732, 1829
Sau96I	GGNCC	1 cut(s)	635
SchI	GAGTC	2 cut(s)	846, 1655
ScrFI	CCNGG	3 cut(s)	348, 1206, 1426
SduI	GDGCHC	1 cut(s)	1415
SfaNI	GCATC	3 cut(s)	1150, 1629, 1750
SfcI	CTRYAG	3 cut(s)	612, 915, 1707
Sfr274I	CTCGAG	1 cut(s)	834
SfuI	TTCGAA	1 cut(s)	907
SinI	GGWCC	1 cut(s)	635
SlaI	CTCGAG	1 cut(s)	834
SmiMI	CAYNNNNRTG	1 cut(s)	1124
SmlI	CTYRAG	4 cut(s)	529, 834, 928, 1514
SmoI	CTYRAG	4 cut(s)	529, 834, 928, 1514
SseBI	AGGCCT	3 cut(s)	305, 1567, 1792
SsiI	CCGC	4 cut(s)	373, 761, 1263, 1688
SspMI	CTAG	8 cut(s)	690, 1074, 1106, 1250, 1337, 1361, 1719, 1840
StuI	AGGCCT	3 cut(s)	305, 1567, 1792
StyD4I	CCNGG	3 cut(s)	346, 1204, 1424
StyI	CCWWGG	2 cut(s)	137, 702
TaaI	ACNGT	2 cut(s)	1025, 1126
TaiI	ACGT	1 cut(s)	1410
TaqI	TCGA	7 cut(s)	747, 835, 840, 858, 907, 1234, 1485
TaqII	GACCGA	1 cut(s)	512
TatI	WGTACW	3 cut(s)	219, 1330, 1507
TauI	GCSGC	2 cut(s)	375, 764
TfiI	GAWTC	7 cut(s)	149, 314, 351, 363, 500, 1209, 1482
Tru1I	TTAA	4 cut(s)	56, 87, 468, 1220
Tru9I	TTAA	4 cut(s)	56, 87, 468, 1220
TscAI	CASTG	4 cut(s)	214, 658, 723, 1011
TseFI	GTSAC	3 cut(s)	166, 479, 1593
TseI	GCWGC	5 cut(s)	460, 611, 614, 914, 1031
Tsp45I	GTSAC	3 cut(s)	166, 479, 1593
TspDTI	ATGAA	9 cut(s)	17, 108, 306, 331, 336, 379, 422, 1071, 1647
TspRI	CASTG	4 cut(s)	214, 658, 723, 1011
VpaK11BI	GGWCC	1 cut(s)	635
XapI	RAATTY	5 cut(s)	234, 436, 729, 903, 922
XbaI	TCTAGA	1 cut(s)	1336
XceI	RCATGY	3 cut(s)	226, 1088, 1718
XhoI	CTCGAG	1 cut(s)	834
XmiI	GTMKAC	1 cut(s)	969
XmnI	GAANNNNTTC	2 cut(s)	903, 1013
XspI	CTAG	8 cut(s)	690, 1074, 1106, 1250, 1337, 1361, 1719, 1840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.