RLG00000031008

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
1323294 .. 1328238
4945 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031008

Sequence Viewer

Length: 1020 bp
ATGCTCAACTTCACGATCCTGCAGCAGTTCGACCCGGGCTCCAAGCGCCCCCAAATGAACCAGAACATGGAGTGCCAGTTCATCCTCCAGGGCCTCCGCCTCGTCGATTCCCACTACCTCCAGCTCACCGGCAACTTCCTCCCCCCGCCTAACGCCTCTGACTCCTGCTGGTCCGCCTACCAAACCCTCGCCGACAAATTCGTTGCCGACTTCGACATTCGCTCTACCTGCGGCTTCGAGACCTCCTGGATCTCCCAAGGCTGCATGAACATCACCACCAAGGCCCAATTCGAGGACCTCGTCAGCCAAACCGCCCTAGACAGCGTCGTTTCCAACTGCAACCAGTCGCTCGAGAACAACTCCCCCTGCTCCGCCTGCACCACCAGCCTCTCCGCCACCTATTTGACCGGAGAATCCATTGGGAACGTCTCCGACTACACCGCCTACCCGTCGATTTACGCTGCCGCGTTTGCCAATCCATACGGTCCGACCGATCATGGCAACGCCAAGTGCTTCTTTCAGCTCGATTTCAAGATGGCCAGCTCAAAGATAATGGCCTTTCCTCATAATGATATCAGTGCCATCAGTGGGACAGTACAGTCTTGGATAAGGCTTTACAAAAATGATCATCGTGATGCTGCTCGGGTTGAACTCTTCAATCTCATACTTGAGGATCTCTCAGTTCCAATGACCTTGCAGTTACTGAGAAGAGTTCCCCTTTGCAACTTCAAGTCATTTGTGGTCATTCTTGACCACACTACTGCATGTGGACTGGAATTTCCTAAGATTAATGACAAAGGGCTGGTCAAGTGGTATCCCATCAACAAGAAGAATTTGCAAAGATATCATATTGAGGATGTTCGCCATCTCCCAAGCGGATACAACAAAACTGCTATTTGGATGGCTCTCCAAACAGTCAGTTCTTTGTTAGCTATAGCCACAAATCTACGTGGTAAAGGGAAGATTGATCAAGACTTGAATGATTTGGAACAGATGGTGATTCAGTATTATCAGGGGTAG

Protein Analysis

340

Amino Acids

38.07

Weight (kDa)

5.97

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPARK PF19160 2 - 145 2.6e-34 SPARK
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 598
Acc36I ACCTGC 1 cut(s) 236
AccB7I CCANNNNNTGG 1 cut(s) 67
AccII CGCG 1 cut(s) 467
AclWI GGATC 3 cut(s) 10, 257, 681
AcoI YGGCCR 1 cut(s) 537
AcsI RAATTY 3 cut(s) 197, 776, 832
AfaI GTAC 1 cut(s) 597
AfiI CCNNNNNNNGG 3 cut(s) 67, 292, 588
AgsI TTSAA 5 cut(s) 532, 650, 658, 730, 979
AjnI CCWGG 2 cut(s) 87, 245
AjuI GAANNNNNNNTTGG 2 cut(s) 272, 304
AloI GAACNNNNNNTCC 2 cut(s) 62, 94
AluBI AGCT 4 cut(s) 124, 523, 543, 932
AluI AGCT 4 cut(s) 124, 523, 543, 932
Alw26I GTCTC 2 cut(s) 233, 433
AlwI GGATC 3 cut(s) 10, 257, 681
AlwNI CAGNNNCTG 1 cut(s) 703
Ama87I CYCGRG 3 cut(s) 34, 350, 642
AoxI GGCC 4 cut(s) 91, 282, 537, 555
ApeKI GCWGC 4 cut(s) 22, 261, 461, 638
ApoI RAATTY 3 cut(s) 197, 776, 832
ArsI GACNNNNNNTTYG 2 cut(s) 789, 821
AseI ATTAAT 1 cut(s) 789
AspLEI GCGC 1 cut(s) 48
AspS9I GGNCC 5 cut(s) 91, 171, 283, 295, 485
AsuC2I CCSGG 2 cut(s) 35, 36
AsuHPI GGTGA 3 cut(s) 118, 265, 1009
AvaI CYCGRG 3 cut(s) 34, 350, 642
AvaII GGWCC 3 cut(s) 171, 295, 485
BalI TGGCCA 1 cut(s) 539
BanII GRGCYC 1 cut(s) 41
BbvI GCAGC 4 cut(s) 34, 248, 448, 625
BccI CCATC 6 cut(s) 529, 590, 827, 873, 895, 988
BciT130I CCWGG 2 cut(s) 89, 247
BciVI GTATCC 2 cut(s) 825, 872
BclI TGATCA 2 cut(s) 625, 967
BcnI CCSGG 2 cut(s) 35, 36
BcoDI GTCTC 2 cut(s) 233, 433
BfaI CTAG 1 cut(s) 317
BfmI CTRYAG 2 cut(s) 20, 933
BfoI RGCGCY 1 cut(s) 49
BfuAI ACCTGC 1 cut(s) 236
BfuI GTATCC 2 cut(s) 825, 872
BisI GCNGC 6 cut(s) 23, 232, 262, 462, 465, 639
BlsI GCNGC 6 cut(s) 24, 233, 263, 463, 466, 640
Bme1390I CCNGG 4 cut(s) 35, 36, 89, 247
Bme18I GGWCC 3 cut(s) 171, 295, 485
BmeT110I CYCGRG 3 cut(s) 34, 350, 642
BmgT120I GGNCC 5 cut(s) 91, 171, 283, 295, 485
BmiI GGNNCC 1 cut(s) 40
BmrFI CCNGG 4 cut(s) 35, 36, 89, 247
BmsI GCATC 1 cut(s) 625
BplI GAGNNNNNCTC 4 cut(s) 344, 376, 662, 694
BpmI CTGGAG 2 cut(s) 71, 104
BpuEI CTTGAG 1 cut(s) 689
BpuMI CCSGG 2 cut(s) 35, 36
BsaAI YACGTR 1 cut(s) 950
BsaI GGTCTC 1 cut(s) 233
BsaJI CCNNGG 4 cut(s) 34, 88, 256, 279
BsaWI WCCGGW 1 cut(s) 407
BsaXI ACNNNNNCTCC 4 cut(s) 23, 53, 62, 92
Bsc4I CCNNNNNNNGG 3 cut(s) 67, 292, 588
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 3 cut(s) 76, 343, 777
BseBI CCWGG 2 cut(s) 89, 247
BseDI CCNNGG 4 cut(s) 34, 88, 256, 279
BseGI GGATG 3 cut(s) 81, 862, 906
BseLI CCNNNNNNNGG 3 cut(s) 67, 292, 588
BseMII CTCAG 2 cut(s) 693, 695
BseNI ACTGG 3 cut(s) 76, 343, 777
BseXI GCAGC 4 cut(s) 34, 248, 448, 625
BsgI GTGCAG 1 cut(s) 361
Bsh1236I CGCG 1 cut(s) 467
Bsh1285I CGRYCG 1 cut(s) 492
BshFI GGCC 4 cut(s) 93, 284, 539, 557
BsiEI CGRYCG 1 cut(s) 492
BsiHKCI CYCGRG 3 cut(s) 34, 350, 642
BsiSI CCGG 3 cut(s) 35, 129, 408
BslFI GGGAC 1 cut(s) 604
BslI CCNNNNNNNGG 3 cut(s) 67, 292, 588
BsmAI GTCTC 2 cut(s) 233, 433
BsmBI CGTCTC 1 cut(s) 433
BsmFI GGGAC 1 cut(s) 604
BsnI GGCC 4 cut(s) 93, 284, 539, 557
Bso31I GGTCTC 1 cut(s) 233
BsoBI CYCGRG 3 cut(s) 34, 350, 642
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 6 cut(s) 15, 249, 493, 625, 673, 967
BspANI GGCC 4 cut(s) 93, 284, 539, 557
BspCNI CTCAG 2 cut(s) 692, 696
BspFNI CGCG 1 cut(s) 467
BspLI GGNNCC 1 cut(s) 40
BspMAI CTGCAG 1 cut(s) 24
BspMI ACCTGC 1 cut(s) 236
BspPI GGATC 3 cut(s) 10, 257, 681
BspTNI GGTCTC 1 cut(s) 233
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 3 cut(s) 76, 343, 777
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 4 cut(s) 34, 88, 256, 279
BssMI GATC 6 cut(s) 15, 249, 493, 625, 673, 967
BssT1I CCWWGG 2 cut(s) 256, 279
Bst2UI CCWGG 2 cut(s) 89, 247
Bst4CI ACNGT 4 cut(s) 485, 595, 600, 916
Bst6I CTCTTC 2 cut(s) 659, 703
BstBAI YACGTR 1 cut(s) 950
BstC8I GCNNGC 2 cut(s) 376, 541
BstDEI CTNAG 3 cut(s) 679, 704, 783
BstF5I GGATG 3 cut(s) 81, 862, 906
BstFNI CGCG 1 cut(s) 467
BstH2I RGCGCY 1 cut(s) 49
BstHHI GCGC 1 cut(s) 48
BstKTI GATC 6 cut(s) 18, 252, 496, 628, 676, 970
BstMAI GTCTC 2 cut(s) 233, 433
BstMBI GATC 6 cut(s) 15, 249, 493, 625, 673, 967
BstMCI CGRYCG 1 cut(s) 492
BstMWI GCNNNNNNNGC 5 cut(s) 45, 228, 375, 384, 470
BstNI CCWGG 2 cut(s) 89, 247
BstNSI RCATGY 1 cut(s) 768
BstSCI CCNGG 4 cut(s) 33, 34, 87, 245
BstSFI CTRYAG 2 cut(s) 20, 933
BstUI CGCG 1 cut(s) 467
BstV1I GCAGC 4 cut(s) 34, 248, 448, 625
BstX2I RGATCY 2 cut(s) 249, 673
BstYI RGATCY 2 cut(s) 249, 673
BsuI GTATCC 2 cut(s) 825, 872
BsuRI GGCC 4 cut(s) 93, 284, 539, 557
BtsCI GGATG 3 cut(s) 81, 862, 906
BtsIMutI CAGTG 2 cut(s) 583, 592
BveI ACCTGC 1 cut(s) 236
Cac8I GCNNGC 2 cut(s) 376, 541
CaiI CAGNNNCTG 1 cut(s) 703
CfoI GCGC 1 cut(s) 48
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 5 cut(s) 91, 171, 283, 295, 485
Cfr9I CCCGGG 1 cut(s) 34
CpoI CGGWCCG 1 cut(s) 485
CseI GACGC 1 cut(s) 313
Csp6I GTAC 1 cut(s) 596
CspI CGGWCCG 1 cut(s) 485
CviAII CATG 4 cut(s) 67, 265, 497, 765
CviQI GTAC 1 cut(s) 596
DdeI CTNAG 3 cut(s) 679, 704, 783
DpnI GATC 6 cut(s) 17, 251, 495, 627, 675, 969
DpnII GATC 6 cut(s) 15, 249, 493, 625, 673, 967
DrdI GACNNNNNNGTC 1 cut(s) 598
DseDI GACNNNNNNGTC 1 cut(s) 598
EaeI YGGCCR 1 cut(s) 537
Eam1104I CTCTTC 2 cut(s) 659, 703
EarI CTCTTC 2 cut(s) 659, 703
EciI GGCGGA 4 cut(s) 86, 163, 361, 382
Eco130I CCWWGG 2 cut(s) 256, 279
Eco24I GRGCYC 1 cut(s) 41
Eco31I GGTCTC 1 cut(s) 233
Eco32I GATATC 2 cut(s) 574, 845
Eco47I GGWCC 3 cut(s) 171, 295, 485
Eco88I CYCGRG 3 cut(s) 34, 350, 642
EcoO109I RGGNCCY 2 cut(s) 91, 295
EcoRII CCWGG 2 cut(s) 87, 245
EcoRV GATATC 2 cut(s) 574, 845
EcoT14I CCWWGG 2 cut(s) 256, 279
EcoT38I GRGCYC 1 cut(s) 41
ErhI CCWWGG 2 cut(s) 256, 279
Esp3I CGTCTC 1 cut(s) 433
FaeI CATG 4 cut(s) 70, 268, 500, 768
FaiI YATR 9 cut(s) 68, 266, 481, 498, 567, 665, 766, 849, 935
FalI AAGNNNNNCTT 2 cut(s) 500, 532
FaqI GGGAC 1 cut(s) 604
FatI CATG 4 cut(s) 66, 264, 496, 764
FauI CCCGC 1 cut(s) 153
FbaI TGATCA 2 cut(s) 625, 967
Fnu4HI GCNGC 6 cut(s) 23, 232, 262, 462, 465, 639
FokI GGATG 3 cut(s) 68, 869, 913
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 6 cut(s) 23, 232, 262, 462, 465, 639
FspBI CTAG 1 cut(s) 317
GlaI GCGC 1 cut(s) 47
GluI GCNGC 6 cut(s) 23, 232, 262, 462, 465, 639
GsuI CTGGAG 2 cut(s) 71, 104
HaeII RGCGCY 1 cut(s) 49
HaeIII GGCC 4 cut(s) 93, 284, 539, 557
HapII CCGG 3 cut(s) 35, 129, 408
HgaI GACGC 1 cut(s) 313
HhaI GCGC 1 cut(s) 48
Hin1II CATG 4 cut(s) 70, 268, 500, 768
Hin6I GCGC 1 cut(s) 46
HinP1I GCGC 1 cut(s) 46
HinfI GANTC 4 cut(s) 107, 161, 413, 1000
HpaII CCGG 3 cut(s) 35, 129, 408
HphI GGTGA 3 cut(s) 118, 265, 1009
Hpy166II GTNNAC 1 cut(s) 770
Hpy188I TCNGA 3 cut(s) 160, 433, 489
Hpy188III TCNNGA 7 cut(s) 13, 238, 352, 532, 632, 749, 971
Hpy8I GTNNAC 1 cut(s) 770
Hpy99I CGWCG 3 cut(s) 107, 329, 454
HpyCH4III ACNGT 4 cut(s) 485, 595, 600, 916
HpyCH4IV ACGT 2 cut(s) 426, 949
HpyCH4V TGCA 8 cut(s) 22, 264, 339, 378, 697, 723, 764, 838
HpyF10VI GCNNNNNNNGC 5 cut(s) 45, 228, 375, 384, 470
HpyF3I CTNAG 3 cut(s) 679, 704, 783
HpySE526I ACGT 2 cut(s) 426, 949
Hsp92II CATG 4 cut(s) 70, 268, 500, 768
HspAI GCGC 1 cut(s) 46
Ksp22I TGATCA 2 cut(s) 625, 967
Kzo9I GATC 6 cut(s) 15, 249, 493, 625, 673, 967
LmnI GCTCC 2 cut(s) 44, 374
Lsp1109I GCAGC 4 cut(s) 34, 248, 448, 625
LweI GCATC 1 cut(s) 625
MaeI CTAG 1 cut(s) 317
MaeII ACGT 2 cut(s) 426, 949
MaeIII GTNAC 1 cut(s) 699
MalI GATC 6 cut(s) 17, 251, 495, 627, 675, 969
MboI GATC 6 cut(s) 15, 249, 493, 625, 673, 967
MboII GAAGA 4 cut(s) 646, 720, 841, 973
MflI RGATCY 2 cut(s) 249, 673
MhlI GDGCHC 1 cut(s) 41
MlsI TGGCCA 1 cut(s) 539
MluCI AATT 4 cut(s) 197, 287, 776, 832
MluNI TGGCCA 1 cut(s) 539
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 3 cut(s) 357, 456, 512
Mox20I TGGCCA 1 cut(s) 539
MscI TGGCCA 1 cut(s) 539
MseI TTAA 1 cut(s) 789
MslI CAYNNNNRTG 1 cut(s) 633
Msp20I TGGCCA 1 cut(s) 539
MspI CCGG 3 cut(s) 35, 129, 408
MspR9I CCNGG 4 cut(s) 35, 36, 89, 247
MvaI CCWGG 2 cut(s) 89, 247
MvnI CGCG 1 cut(s) 467
MwoI GCNNNNNNNGC 5 cut(s) 45, 228, 375, 384, 470
NciI CCSGG 2 cut(s) 35, 36
NdeII GATC 6 cut(s) 15, 249, 493, 625, 673, 967
NlaIII CATG 4 cut(s) 70, 268, 500, 768
NlaIV GGNNCC 1 cut(s) 40
NspI RCATGY 1 cut(s) 768
PaeR7I CTCGAG 1 cut(s) 350
PcsI WCGNNNNNNNCGW 2 cut(s) 297, 489
PfeI GAWTC 3 cut(s) 107, 413, 1000
PflFI GACNNNGTC 2 cut(s) 299, 323
PflMI CCANNNNNTGG 1 cut(s) 67
PfoI TCCNGGA 1 cut(s) 245
PkrI GCNGC 6 cut(s) 24, 233, 263, 463, 466, 640
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
Ppu21I YACGTR 1 cut(s) 950
PpuMI RGGWCCY 1 cut(s) 295
PshBI ATTAAT 1 cut(s) 789
Psp5II RGGWCCY 1 cut(s) 295
Psp6I CCWGG 2 cut(s) 87, 245
PspGI CCWGG 2 cut(s) 87, 245
PspN4I GGNNCC 1 cut(s) 40
PspPI GGNCC 5 cut(s) 91, 171, 283, 295, 485
PspPPI RGGWCCY 1 cut(s) 295
PstI CTGCAG 1 cut(s) 24
PstNI CAGNNNCTG 1 cut(s) 703
PsuI RGATCY 2 cut(s) 249, 673
PsyI GACNNNGTC 2 cut(s) 299, 323
RsaI GTAC 1 cut(s) 597
RsaNI GTAC 1 cut(s) 596
RseI CAYNNNNRTG 1 cut(s) 633
Rsr2I CGGWCCG 1 cut(s) 485
RsrII CGGWCCG 1 cut(s) 485
SaqAI TTAA 1 cut(s) 789
SatI GCNGC 6 cut(s) 23, 232, 262, 462, 465, 639
Sau3AI GATC 6 cut(s) 15, 249, 493, 625, 673, 967
Sau96I GGNCC 5 cut(s) 91, 171, 283, 295, 485
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 4 cut(s) 35, 36, 89, 247
SduI GDGCHC 1 cut(s) 41
SfaNI GCATC 1 cut(s) 625
SfcI CTRYAG 2 cut(s) 20, 933
Sfr274I CTCGAG 1 cut(s) 350
SinI GGWCC 3 cut(s) 171, 295, 485
SlaI CTCGAG 1 cut(s) 350
SmaI CCCGGG 1 cut(s) 36
SmiMI CAYNNNNRTG 1 cut(s) 633
SmlI CTYRAG 2 cut(s) 350, 668
SmoI CTYRAG 2 cut(s) 350, 668
Sse9I AATT 4 cut(s) 197, 287, 776, 832
SspMI CTAG 1 cut(s) 317
StyD4I CCNGG 4 cut(s) 33, 34, 87, 245
StyI CCWWGG 2 cut(s) 256, 279
TaaI ACNGT 4 cut(s) 485, 595, 600, 916
TaiI ACGT 2 cut(s) 429, 952
TaqI TCGA 8 cut(s) 30, 105, 213, 237, 291, 351, 452, 525
TaqII GACCGA 1 cut(s) 506
TasI AATT 4 cut(s) 197, 287, 776, 832
TatI WGTACW 1 cut(s) 595
TauI GCSGC 2 cut(s) 234, 467
TfiI GAWTC 3 cut(s) 107, 413, 1000
Tru1I TTAA 1 cut(s) 789
Tru9I TTAA 1 cut(s) 789
TscAI CASTG 2 cut(s) 583, 592
TseI GCWGC 4 cut(s) 22, 261, 461, 638
TspDTI ATGAA 3 cut(s) 70, 71, 281
TspMI CCCGGG 1 cut(s) 34
TspRI CASTG 2 cut(s) 583, 592
Tth111I GACNNNGTC 2 cut(s) 299, 323
Van91I CCANNNNNTGG 1 cut(s) 67
VpaK11BI GGWCC 3 cut(s) 171, 295, 485
VspI ATTAAT 1 cut(s) 789
XapI RAATTY 3 cut(s) 197, 776, 832
XceI RCATGY 1 cut(s) 768
XhoI CTCGAG 1 cut(s) 350
XmaI CCCGGG 1 cut(s) 34
XspI CTAG 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.