Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8460761.1

Orthogroup ID

OG0001738

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 1840

Gene Structure 1840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8460761.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1840 bp

tctcccagcaaaacgtcaccgttccgtgcccgctcaacttcacgatcctgcagcagttcgacccgggctccaagcgcccccaaatgaacgataacatggagtgccagtacatcctccaaggcctccgcctcgtcgattcccactacctccagctcaccggcaacttcctccccccgcccaacgcctccgactcctgctggtccgcctaccaaaccctcgccgacaaattcgtcgccggcttcgacattcgctccgcctgcggcttcgagacctcctggatctcccagggctgcatgaacatcaccaccaaggcccaattcgaggacctcgtcggccaaaccgccctagacggcgtcgtttccaactgcaaccagtcgctcgagaacaactccccctgcgccgcctgcatcaccagcctctccagcctctccgccacctatttgaccggagaatccatcggcaacgtctccggctgcaccgcctacccgtccatttacgccgccgcgttcgccaatccctacggcccgaccgatcacggcaacgccaagtgcttctttcagctcgatttcaccacggccagctccggtaagaagaaaaggactctgattttgattgtgttggttgcctgtggtttcgggttgttggttttaatcggtgggatttggttctcatggcacaagtacgaagactatatattcaacaagaggcgacaggatgctaatgatagaattgagtcgggtttgggtaatgcattagagtccattagtgggagtactactttggttaagttcacattcgaagagattagcaaggctactaagaatttctctagagataatataatcgggaggggaggatatgggaatgtgtacaagggcactctggctgatggctctgaagttgcattgaagaggttcaagaactgctctgctgccggtgacgcgaatttcgctcacgaggttgaggtgattgcgagcgttaggcatgtgaatcttgttgctttgagaggttattgtaccgcgacgacgcatttggtaggtcaccagaggatcattgtgtgtgatttgatgaagaatgggagtctccatgaccatttgtttgggacttttgagaacaagctcagttggccagttcggcaaaggattgcgctagggactgcgagggggttggcttatttgcattacggggctcaaccgtccatcattcatagggatattaaagcaaataacatacttttggatgaggattttgaggccaaagtggcggattttggacttgcaaagtttacgcccgagggaatgacacatttgagcactagggtggctggaacgatgggttatcttgctccggagtatgcattatatgggcagctgacggagaaaagtgatgtttatagctttggtgttgtgatgcttgagcttttgagtggaaagaaagcactccatgtgaacaatgatagtcagccgtcacttgtgacggattgggcatggtccatggtgcgagaaggaaaagcgctggatgtcattgaagatatgccagagaagggttcacctgaagttttagagaagtatgtattggttgccgttctttgttctcatccacagttgtatgctaggccaacaatggatcaggttgtaaaaatgttggaaacagacttgtcagttccctcaatcccggaaagaccaattccccttgtggccgagattgatgatatagaaagatacagtagcagtggctcaattcagctctctagtacaggaggcttccagacttacacatttgaaagtagccttccttgcgaccataagggagacggagaaagttcaggttcaacaacaga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

612

Amino Acids

66.85

Weight (kDa)

5.56

Isoelectric Point (pI)

44.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48010
fragaria_vesca	FvH4_2g24291 FvH4_2g24291 FvH4_6g05000 FvH4_6g05020
malus_domestica	MD03G1272600.v1.1 MD04G1211500.v1.1 MD11G1293500.v1.1 MD12G1226500.v1.1
prunus_persica	Prupe.6G332100_v2.0.a1 Prupe.6G332200_v2.0.a1 Prupe.8G248800_v2.0.a1
pyrus_communis	pycom03g21710 pycom11g25970
rosa_chinensis	RchiOBHm_Chr3g0453511 RchiOBHm_Chr3g0453521 RchiOBHm_Chr5g0002211 RchiOBHm_Chr6g0292151
rosa_laevigata	RLG00000012057 RLG00000025506 RLG00000025507 RLG00000031008
rosa_multiflora	Rmu_co8460761.1_g000001 Rmu_sc0000510.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073750 Rroxscaffold_2G00125960 Rroxscaffold_6G00430490 Rroxscaffold_7G00175400
rosa_rugosa	Rorug02G0649700 Rorug02G0649800 Rorug06G0223800
rosa_samantha	Rh1BG359400 Rh3AG052600 Rh3AG052700 Rh3BG054100 Rh3BG054200 Rh3CG053400 Rh3CG053500 Rh3DG054200 Rh3DG054300 Rh6AG337200 Rh6BG344400 Rh6CG351200 Rh6DG337400 Rh7BG191800
rosa_wichuraiana	Rw3G004050 Rw3G004060 Rw6G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	229
AccBSI	CCGCTC	1 cut(s)	33
AccII	CGCG	3 cut(s)	505, 943, 1021
AccIII	TCCGGA	1 cut(s)	1347
AclWI	GGATC	4 cut(s)	39, 286, 1057, 1634
AcoI	YGGCCR	4 cut(s)	333, 575, 1126, 1697
AcsI	RAATTY	3 cut(s)	226, 822, 945
AcuI	CTGAAG	2 cut(s)	917, 1574
AcyI	GRCGYC	1 cut(s)	353
AfaI	GTAC	6 cut(s)	109, 682, 774, 871, 1017, 1755
AfeI	AGCGCT	1 cut(s)	1514
AfiI	CCNNNNNNNGG	3 cut(s)	321, 767, 1543
AgsI	TTSAA	6 cut(s)	699, 909, 918, 1528, 1783, 1832
AjnI	CCWGG	2 cut(s)	274, 284
AjuI	GAANNNNNNNTTGG	4 cut(s)	301, 333, 1558, 1590
AleI	CACNNNNGTG	1 cut(s)	1318
AluBI	AGCT	8 cut(s)	153, 561, 581, 1119, 1371, 1397, 1419, 1746
AluI	AGCT	8 cut(s)	153, 561, 581, 1119, 1371, 1397, 1419, 1746
Alw21I	GWGCWC	1 cut(s)	1315
Alw26I	GTCTC	4 cut(s)	262, 471, 1087, 1805
AlwI	GGATC	4 cut(s)	39, 286, 1057, 1634
Ama87I	CYCGRG	3 cut(s)	63, 379, 1291
Aor13HI	TCCGGA	1 cut(s)	1347
Aor51HI	AGCGCT	1 cut(s)	1514
AoxI	GGCC	9 cut(s)	120, 311, 333, 522, 575, 1126, 1253, 1615, 1697
ApeKI	GCWGC	5 cut(s)	51, 290, 473, 931, 1368
ApoI	RAATTY	3 cut(s)	226, 822, 945
ArsI	GACNNNNNNTTYG	8 cut(s)	591, 623, 931, 963, 1014, 1046, 1081, 1113
Asp700I	GAANNNNTTC	1 cut(s)	913
AspLEI	GCGC	4 cut(s)	77, 400, 1149, 1515
AspS9I	GGNCC	5 cut(s)	200, 312, 324, 523, 1490
AsuC2I	CCSGG	3 cut(s)	64, 65, 1675
AsuHPI	GGTGA	9 cut(s)	9, 147, 294, 402, 561, 949, 978, 1033, 1541
AsuII	TTCGAA	1 cut(s)	797
AvaI	CYCGRG	3 cut(s)	63, 379, 1291
AvaII	GGWCC	3 cut(s)	200, 324, 1490
BaeGI	GKGCMC	2 cut(s)	31, 880
BalI	TGGCCA	1 cut(s)	1128
BanII	GRGCYC	2 cut(s)	70, 1191
BauI	CACGAG	1 cut(s)	955
BbsI	GAAGAC	1 cut(s)	692
Bbv12I	GWGCWC	1 cut(s)	1315
BbvI	GCAGC	5 cut(s)	63, 277, 460, 918, 1380
BccI	CCATC	4 cut(s)	463, 883, 1207, 1326
BceAI	ACGGC	6 cut(s)	366, 537, 552, 590, 1449, 1567
BciT130I	CCWGG	2 cut(s)	276, 286
BcnI	CCSGG	3 cut(s)	64, 65, 1675
BcoDI	GTCTC	4 cut(s)	262, 471, 1087, 1805
BfaI	CTAG	6 cut(s)	346, 830, 1150, 1316, 1613, 1751
BfmI	CTRYAG	1 cut(s)	49
BfoI	RGCGCY	2 cut(s)	78, 1516
BglI	GCCNNNNNGGC	2 cut(s)	1134, 1261
BisI	GCNGC	9 cut(s)	52, 261, 291, 401, 474, 500, 503, 932, 1369
BlsI	GCNGC	9 cut(s)	53, 262, 292, 402, 475, 501, 504, 933, 1370
BmcAI	AGTACT	1 cut(s)	774
Bme1390I	CCNGG	5 cut(s)	64, 65, 276, 286, 1675
Bme18I	GGWCC	3 cut(s)	200, 324, 1490
BmeT110I	CYCGRG	3 cut(s)	63, 379, 1291
BmgT120I	GGNCC	5 cut(s)	200, 312, 324, 523, 1490
BmiI	GGNNCC	1 cut(s)	69
BmrFI	CCNGG	5 cut(s)	64, 65, 276, 286, 1675
BmsI	GCATC	3 cut(s)	416, 705, 1400
BpiI	GAAGAC	1 cut(s)	692
BplI	GAGNNNNNCTC	2 cut(s)	373, 405
BpmI	CTGGAG	2 cut(s)	133, 405
Bpu14I	TTCGAA	1 cut(s)	797
BpuEI	CTTGAG	1 cut(s)	1435
BpuMI	CCSGG	3 cut(s)	64, 65, 1675
BsaHI	GRCGYC	1 cut(s)	353
BsaI	GGTCTC	1 cut(s)	262
BsaJI	CCNNGG	8 cut(s)	63, 117, 284, 285, 308, 572, 1292, 1493
BsaWI	WCCGGW	3 cut(s)	445, 583, 1347
BsaXI	ACNNNNNCTCC	6 cut(s)	52, 82, 91, 121, 235, 265
Bsc4I	CCNNNNNNNGG	3 cut(s)	321, 767, 1543
Bse118I	RCCGGY	3 cut(s)	157, 235, 934
Bse1I	ACTGG	3 cut(s)	105, 372, 1129
BseAI	TCCGGA	1 cut(s)	1347
BseBI	CCWGG	2 cut(s)	276, 286
BseDI	CCNNGG	8 cut(s)	63, 117, 284, 285, 308, 572, 1292, 1493
BseGI	GGATG	5 cut(s)	110, 720, 1245, 1524, 1596
BseLI	CCNNNNNNNGG	3 cut(s)	321, 767, 1543
BseMII	CTCAG	1 cut(s)	1134
BseNI	ACTGG	3 cut(s)	105, 372, 1129
BseSI	GKGCMC	2 cut(s)	31, 880
BseXI	GCAGC	5 cut(s)	63, 277, 460, 918, 1380
BseYI	CCCAGC	1 cut(s)	5
BsgI	GTGCAG	1 cut(s)	459
Bsh1236I	CGCG	3 cut(s)	505, 943, 1021
Bsh1285I	CGRYCG	1 cut(s)	530
BshFI	GGCC	9 cut(s)	122, 313, 335, 524, 577, 1128, 1255, 1617, 1699
BsiEI	CGRYCG	1 cut(s)	530
BsiHKAI	GWGCWC	1 cut(s)	1315
BsiHKCI	CYCGRG	3 cut(s)	63, 379, 1291
BsiSI	CCGG	9 cut(s)	64, 158, 236, 446, 470, 584, 935, 1348, 1675
BslFI	GGGAC	2 cut(s)	1116, 1167
BslI	CCNNNNNNNGG	3 cut(s)	321, 767, 1543
BsmAI	GTCTC	4 cut(s)	262, 471, 1087, 1805
BsmBI	CGTCTC	2 cut(s)	471, 1805
BsmFI	GGGAC	2 cut(s)	1116, 1167
BsnI	GGCC	9 cut(s)	122, 313, 335, 524, 577, 1128, 1255, 1617, 1699
Bso31I	GGTCTC	1 cut(s)	262
BsoBI	CYCGRG	3 cut(s)	63, 379, 1291
Bsp119I	TTCGAA	1 cut(s)	797
Bsp1286I	GDGCHC	5 cut(s)	31, 70, 880, 1191, 1315
Bsp13I	TCCGGA	1 cut(s)	1347
Bsp1407I	TGTACA	1 cut(s)	869
Bsp143I	GATC	5 cut(s)	44, 278, 531, 1049, 1626
Bsp19I	CCATGG	1 cut(s)	1493
BspANI	GGCC	9 cut(s)	122, 313, 335, 524, 577, 1128, 1255, 1617, 1699
BspCNI	CTCAG	1 cut(s)	1133
BspEI	TCCGGA	1 cut(s)	1347
BspFNI	CGCG	3 cut(s)	505, 943, 1021
BspLI	GGNNCC	1 cut(s)	69
BspMAI	CTGCAG	1 cut(s)	53
BspPI	GGATC	4 cut(s)	39, 286, 1057, 1634
BspT104I	TTCGAA	1 cut(s)	797
BspTNI	GGTCTC	1 cut(s)	262
BsrBI	CCGCTC	1 cut(s)	33
BsrFI	RCCGGY	3 cut(s)	157, 235, 934
BsrGI	TGTACA	1 cut(s)	869
BsrI	ACTGG	3 cut(s)	105, 372, 1129
BssAI	RCCGGY	3 cut(s)	157, 235, 934
BssECI	CCNNGG	8 cut(s)	63, 117, 284, 285, 308, 572, 1292, 1493
BssMI	GATC	5 cut(s)	44, 278, 531, 1049, 1626
BssNI	GRCGYC	1 cut(s)	353
BssSI	CACGAG	1 cut(s)	955
BssT1I	CCWWGG	3 cut(s)	117, 308, 1493
Bst2BI	CACGAG	1 cut(s)	955
Bst2UI	CCWGG	2 cut(s)	276, 286
Bst4CI	ACNGT	4 cut(s)	21, 1196, 1604, 1726
Bst6I	CTCTTC	2 cut(s)	794, 904
BstACI	GRCGYC	1 cut(s)	353
BstAUI	TGTACA	1 cut(s)	869
BstBI	TTCGAA	1 cut(s)	797
BstC8I	GCNNGC	6 cut(s)	31, 237, 258, 405, 579, 975
BstDEI	CTNAG	2 cut(s)	818, 1120
BstDSI	CCRYGG	2 cut(s)	572, 1493
BstEII	GGTNACC	1 cut(s)	1039
BstF5I	GGATG	5 cut(s)	110, 720, 1245, 1524, 1596
BstFNI	CGCG	3 cut(s)	505, 943, 1021
BstH2I	RGCGCY	2 cut(s)	78, 1516
BstHHI	GCGC	4 cut(s)	77, 400, 1149, 1515
BstKTI	GATC	5 cut(s)	47, 281, 534, 1052, 1629
BstMAI	GTCTC	4 cut(s)	262, 471, 1087, 1805
BstMBI	GATC	5 cut(s)	44, 278, 531, 1049, 1626
BstMCI	CGRYCG	1 cut(s)	530
BstNI	CCWGG	2 cut(s)	276, 286
BstNSI	RCATGY	1 cut(s)	988
BstPI	GGTNACC	1 cut(s)	1039
BstSCI	CCNGG	5 cut(s)	62, 63, 274, 284, 1673
BstSFI	CTRYAG	1 cut(s)	49
BstSLI	GKGCMC	2 cut(s)	31, 880
BstUI	CGCG	3 cut(s)	505, 943, 1021
BstV1I	GCAGC	5 cut(s)	63, 277, 460, 918, 1380
BstV2I	GAAGAC	1 cut(s)	692
BstX2I	RGATCY	1 cut(s)	278
BstXI	CCANNNNNNTGG	1 cut(s)	1099
BstYI	RGATCY	1 cut(s)	278
BsuRI	GGCC	9 cut(s)	122, 313, 335, 524, 577, 1128, 1255, 1617, 1699
BtgI	CCRYGG	2 cut(s)	572, 1493
BtsCI	GGATG	5 cut(s)	110, 720, 1245, 1524, 1596
BtsI	GCAGTG	1 cut(s)	1737
BtsIMutI	CAGTG	1 cut(s)	1737
Cac8I	GCNNGC	6 cut(s)	31, 237, 258, 405, 579, 975
CfoI	GCGC	4 cut(s)	77, 400, 1149, 1515
Cfr10I	RCCGGY	3 cut(s)	157, 235, 934
Cfr13I	GGNCC	5 cut(s)	200, 312, 324, 523, 1490
Cfr9I	CCCGGG	1 cut(s)	63
CseI	GACGC	3 cut(s)	342, 949, 1035
Csp6I	GTAC	6 cut(s)	108, 681, 773, 870, 1016, 1754
CviAII	CATG	8 cut(s)	96, 294, 671, 985, 1087, 1444, 1487, 1494
CviQI	GTAC	6 cut(s)	108, 681, 773, 870, 1016, 1754
DdeI	CTNAG	2 cut(s)	818, 1120
DpnI	GATC	5 cut(s)	46, 280, 533, 1051, 1628
DpnII	GATC	5 cut(s)	44, 278, 531, 1049, 1626
DrdI	GACNNNNNNGTC	1 cut(s)	229
DseDI	GACNNNNNNGTC	1 cut(s)	229
EaeI	YGGCCR	4 cut(s)	333, 575, 1126, 1697
Eam1104I	CTCTTC	2 cut(s)	794, 904
EarI	CTCTTC	2 cut(s)	794, 904
EciI	GGCGGA	5 cut(s)	115, 192, 243, 420, 1279
Eco130I	CCWWGG	3 cut(s)	117, 308, 1493
Eco147I	AGGCCT	1 cut(s)	122
Eco24I	GRGCYC	2 cut(s)	70, 1191
Eco31I	GGTCTC	1 cut(s)	262
Eco47I	GGWCC	3 cut(s)	200, 324, 1490
Eco47III	AGCGCT	1 cut(s)	1514
Eco57I	CTGAAG	2 cut(s)	917, 1574
Eco88I	CYCGRG	3 cut(s)	63, 379, 1291
Eco91I	GGTNACC	1 cut(s)	1039
EcoO109I	RGGNCCY	1 cut(s)	324
EcoO65I	GGTNACC	1 cut(s)	1039
EcoRII	CCWGG	2 cut(s)	274, 284
EcoT14I	CCWWGG	3 cut(s)	117, 308, 1493
EcoT22I	ATGCAT	2 cut(s)	753, 1359
EcoT38I	GRGCYC	2 cut(s)	70, 1191
ErhI	CCWWGG	3 cut(s)	117, 308, 1493
Esp3I	CGTCTC	2 cut(s)	471, 1805
FaeI	CATG	8 cut(s)	99, 297, 674, 988, 1090, 1447, 1490, 1497
FalI	AAGNNNNNCTT	2 cut(s)	538, 570
FaqI	GGGAC	2 cut(s)	1116, 1167
FatI	CATG	8 cut(s)	95, 293, 670, 984, 1086, 1443, 1486, 1493
FauI	CCCGC	2 cut(s)	38, 182
Fnu4HI	GCNGC	9 cut(s)	52, 261, 291, 401, 474, 500, 503, 932, 1369
FokI	GGATG	5 cut(s)	97, 727, 1252, 1531, 1583
FriOI	GRGCYC	2 cut(s)	70, 1191
Fsp4HI	GCNGC	9 cut(s)	52, 261, 291, 401, 474, 500, 503, 932, 1369
FspBI	CTAG	6 cut(s)	346, 830, 1150, 1316, 1613, 1751
GlaI	GCGC	4 cut(s)	76, 399, 1148, 1514
GluI	GCNGC	9 cut(s)	52, 261, 291, 401, 474, 500, 503, 932, 1369
GsaI	CCCAGC	1 cut(s)	9
GsuI	CTGGAG	2 cut(s)	133, 405
HaeII	RGCGCY	2 cut(s)	78, 1516
HaeIII	GGCC	9 cut(s)	122, 313, 335, 524, 577, 1128, 1255, 1617, 1699
HapII	CCGG	9 cut(s)	64, 158, 236, 446, 470, 584, 935, 1348, 1675
HgaI	GACGC	3 cut(s)	342, 949, 1035
HhaI	GCGC	4 cut(s)	77, 400, 1149, 1515
Hin1I	GRCGYC	1 cut(s)	353
Hin1II	CATG	8 cut(s)	99, 297, 674, 988, 1090, 1447, 1490, 1497
Hin6I	GCGC	4 cut(s)	75, 398, 1147, 1513
HinP1I	GCGC	4 cut(s)	75, 398, 1147, 1513
HinfI	GANTC	8 cut(s)	136, 190, 451, 600, 733, 757, 990, 1080
HpaII	CCGG	9 cut(s)	64, 158, 236, 446, 470, 584, 935, 1348, 1675
HphI	GGTGA	9 cut(s)	9, 147, 294, 402, 561, 949, 978, 1033, 1541
Hpy166II	GTNNAC	5 cut(s)	791, 870, 1286, 1449, 1549
Hpy188I	TCNGA	3 cut(s)	189, 605, 897
Hpy188III	TCNNGA	9 cut(s)	42, 267, 381, 830, 846, 918, 955, 1348, 1767
Hpy8I	GTNNAC	5 cut(s)	791, 870, 1286, 1449, 1549
Hpy99I	CGWCG	6 cut(s)	136, 235, 334, 358, 1026, 1029
HpyAV	CCTTC	3 cut(s)	1498, 1536, 1801
HpyCH4III	ACNGT	4 cut(s)	21, 1196, 1604, 1726
HpyCH4IV	ACGT	2 cut(s)	14, 464
HpyF3I	CTNAG	2 cut(s)	818, 1120
HpySE526I	ACGT	2 cut(s)	14, 464
Hsp92I	GRCGYC	1 cut(s)	353
Hsp92II	CATG	8 cut(s)	99, 297, 674, 988, 1090, 1447, 1490, 1497
HspAI	GCGC	4 cut(s)	75, 398, 1147, 1513
Kpn2I	TCCGGA	1 cut(s)	1347
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
Kzo9I	GATC	5 cut(s)	44, 278, 531, 1049, 1626
LmnI	GCTCC	4 cut(s)	73, 256, 586, 1350
Lsp1109I	GCAGC	5 cut(s)	63, 277, 460, 918, 1380
LweI	GCATC	3 cut(s)	416, 705, 1400
MaeI	CTAG	6 cut(s)	346, 830, 1150, 1316, 1613, 1751
MaeII	ACGT	2 cut(s)	14, 464
MaeIII	GTNAC	5 cut(s)	15, 937, 1039, 1466, 1473
MalI	GATC	5 cut(s)	46, 280, 533, 1051, 1628
MbiI	CCGCTC	1 cut(s)	33
MboI	GATC	5 cut(s)	44, 278, 531, 1049, 1626
MboII	GAAGA	6 cut(s)	603, 697, 811, 921, 1083, 1540
MflI	RGATCY	1 cut(s)	278
MhlI	GDGCHC	5 cut(s)	31, 70, 880, 1191, 1315
MlsI	TGGCCA	1 cut(s)	1128
MluCI	AATT	7 cut(s)	226, 316, 728, 822, 945, 1685, 1739
MluNI	TGGCCA	1 cut(s)	1128
MlyI	GAGTC	5 cut(s)	184, 594, 742, 766, 1089
MmeI	TCCRAC	3 cut(s)	212, 386, 1625
Mox20I	TGGCCA	1 cut(s)	1128
Mph1103I	ATGCAT	2 cut(s)	753, 1359
MroI	TCCGGA	1 cut(s)	1347
MroNI	GCCGGC	1 cut(s)	235
MroXI	GAANNNNTTC	1 cut(s)	913
MscI	TGGCCA	1 cut(s)	1128
MseI	TTAA	3 cut(s)	649, 785, 1217
MslI	CAYNNNNRTG	1 cut(s)	1318
Msp20I	TGGCCA	1 cut(s)	1128
MspA1I	CMGCKG	1 cut(s)	1371
MspI	CCGG	9 cut(s)	64, 158, 236, 446, 470, 584, 935, 1348, 1675
MspR9I	CCNGG	5 cut(s)	64, 65, 276, 286, 1675
MvaI	CCWGG	2 cut(s)	276, 286
MvnI	CGCG	3 cut(s)	505, 943, 1021
NaeI	GCCGGC	1 cut(s)	237
NciI	CCSGG	3 cut(s)	64, 65, 1675
NcoI	CCATGG	1 cut(s)	1493
NdeII	GATC	5 cut(s)	44, 278, 531, 1049, 1626
NgoMIV	GCCGGC	1 cut(s)	235
NlaIII	CATG	8 cut(s)	99, 297, 674, 988, 1090, 1447, 1490, 1497
NlaIV	GGNNCC	1 cut(s)	69
NmeAIII	GCCGAG	1 cut(s)	1725
NmuCI	GTSAC	5 cut(s)	15, 937, 1039, 1466, 1473
NsiI	ATGCAT	2 cut(s)	753, 1359
NspI	RCATGY	1 cut(s)	988
NspV	TTCGAA	1 cut(s)	797
OliI	CACNNNNGTG	1 cut(s)	1318
PaeR7I	CTCGAG	1 cut(s)	379
PasI	CCCWGGG	1 cut(s)	285
PceI	AGGCCT	1 cut(s)	122
PcsI	WCGNNNNNNNCGW	3 cut(s)	239, 326, 527
PdiI	GCCGGC	1 cut(s)	237
PdmI	GAANNNNTTC	1 cut(s)	913
PfeI	GAWTC	3 cut(s)	136, 451, 990
PflFI	GACNNNGTC	2 cut(s)	328, 352
PfoI	TCCNGGA	2 cut(s)	274, 1673
PkrI	GCNGC	9 cut(s)	53, 262, 292, 402, 475, 501, 504, 933, 1370
PleI	GAGTC	5 cut(s)	184, 594, 741, 765, 1088
PpsI	GAGTC	5 cut(s)	184, 594, 741, 765, 1088
PpuMI	RGGWCCY	1 cut(s)	324
Psp5II	RGGWCCY	1 cut(s)	324
Psp6I	CCWGG	2 cut(s)	274, 284
PspEI	GGTNACC	1 cut(s)	1039
PspFI	CCCAGC	1 cut(s)	5
PspGI	CCWGG	2 cut(s)	274, 284
PspN4I	GGNNCC	1 cut(s)	69
PspPI	GGNCC	5 cut(s)	200, 312, 324, 523, 1490
PspPPI	RGGWCCY	1 cut(s)	324
PstI	CTGCAG	1 cut(s)	53
PsuI	RGATCY	1 cut(s)	278
PsyI	GACNNNGTC	2 cut(s)	328, 352
PvuII	CAGCTG	1 cut(s)	1371
RsaI	GTAC	6 cut(s)	109, 682, 774, 871, 1017, 1755
RsaNI	GTAC	6 cut(s)	108, 681, 773, 870, 1016, 1754
RseI	CAYNNNNRTG	1 cut(s)	1318
SaqAI	TTAA	3 cut(s)	649, 785, 1217
SatI	GCNGC	9 cut(s)	52, 261, 291, 401, 474, 500, 503, 932, 1369
Sau3AI	GATC	5 cut(s)	44, 278, 531, 1049, 1626
Sau96I	GGNCC	5 cut(s)	200, 312, 324, 523, 1490
ScaI	AGTACT	1 cut(s)	774
SchI	GAGTC	5 cut(s)	184, 594, 742, 766, 1089
ScrFI	CCNGG	5 cut(s)	64, 65, 276, 286, 1675
SduI	GDGCHC	5 cut(s)	31, 70, 880, 1191, 1315
SfaNI	GCATC	3 cut(s)	416, 705, 1400
SfcI	CTRYAG	1 cut(s)	49
Sfr274I	CTCGAG	1 cut(s)	379
SfuI	TTCGAA	1 cut(s)	797
SinI	GGWCC	3 cut(s)	200, 324, 1490
SlaI	CTCGAG	1 cut(s)	379
SmaI	CCCGGG	1 cut(s)	65
SmiMI	CAYNNNNRTG	1 cut(s)	1318
SmlI	CTYRAG	2 cut(s)	379, 1414
SmoI	CTYRAG	2 cut(s)	379, 1414
Sse9I	AATT	7 cut(s)	226, 316, 728, 822, 945, 1685, 1739
SseBI	AGGCCT	1 cut(s)	122
SspMI	CTAG	6 cut(s)	346, 830, 1150, 1316, 1613, 1751
StuI	AGGCCT	1 cut(s)	122
StyD4I	CCNGG	5 cut(s)	62, 63, 274, 284, 1673
StyI	CCWWGG	3 cut(s)	117, 308, 1493
TaaI	ACNGT	4 cut(s)	21, 1196, 1604, 1726
TaiI	ACGT	2 cut(s)	17, 467
TaqI	TCGA	8 cut(s)	59, 134, 242, 266, 320, 380, 563, 797
TaqII	GACCGA	1 cut(s)	544
TasI	AATT	7 cut(s)	226, 316, 728, 822, 945, 1685, 1739
TatI	WGTACW	4 cut(s)	107, 772, 869, 1753
TauI	GCSGC	4 cut(s)	263, 403, 502, 505
TfiI	GAWTC	3 cut(s)	136, 451, 990
Tru1I	TTAA	3 cut(s)	649, 785, 1217
Tru9I	TTAA	3 cut(s)	649, 785, 1217
TscAI	CASTG	1 cut(s)	1737
TseFI	GTSAC	5 cut(s)	15, 937, 1039, 1466, 1473
TseI	GCWGC	5 cut(s)	51, 290, 473, 931, 1368
Tsp45I	GTSAC	5 cut(s)	15, 937, 1039, 1466, 1473
TspDTI	ATGAA	4 cut(s)	100, 310, 1084, 1195
TspGWI	ACGGA	4 cut(s)	14, 1390, 1492, 1829
TspMI	CCCGGG	1 cut(s)	63
TspRI	CASTG	1 cut(s)	1737
Tth111I	GACNNNGTC	2 cut(s)	328, 352
VpaK11BI	GGWCC	3 cut(s)	200, 324, 1490
XapI	RAATTY	3 cut(s)	226, 822, 945
XbaI	TCTAGA	1 cut(s)	829
XceI	RCATGY	1 cut(s)	988
XhoI	CTCGAG	1 cut(s)	379
XmaI	CCCGGG	1 cut(s)	63
XmnI	GAANNNNTTC	1 cut(s)	913
XspI	CTAG	6 cut(s)	346, 830, 1150, 1316, 1613, 1751
ZrmI	AGTACT	1 cut(s)	774
Zsp2I	ATGCAT	2 cut(s)	753, 1359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.