Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001738

Physical Location & Seq

Genomic Coordinates Reverse (-)

54153793 .. 54156762

Gene Structure 2970 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG337400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGCCATGTCATCCCACACCCCGCTCTTCCTCTTACTACTCGCTTTACTATCCTTGTCAACTCCAGTTCTCTCCCAGCAAAACGTCACCGTTCCGTGCCCGCTCAACTTCACGATCCTGCAGCAGTTCGACCCCGGCTCCAAGCGCCCCCAAATGAACCAGAACATGGAGTGCCAGTACATCCTCCAAGGCCTCCGCCTCGTCGATTCCCACTACCTCCAGCTCACCGGCAACTTCCTCCCCCCGCCCAACGCCTCCGACTCCTGCTGGTCCGCCTACCAAACCCTCGCCGACAAATTCGTCGCCGACTTCGACATTCGCTCCACCTGCGGCTTCGAGACCTCCTGGATCTCCCAGGGCTGCATGAACATCACCACCAAGGCCCAATTCGAGGACCTCGTCGGCCAAACCGCCCTAGACGGCGTCGTTTCCAACTGCAACCAGTCGCTCGAGAACAACTCCCCCTGCGCCGCCTGCACCACCAGCCTCTCCAGCCTCTCCGCCACCTATTTGACCGGAGAATCCATCGGGAACGTCTCCGGCTGCACCGCCTACCCGTCGATTTACGCCGCCGCGTTCGCCAATCCCTACGGCCCGACCGATCACGGCAACGCCAAGTGCTTCTTTGCGCTCGATTTCACGACGCCCAGCTCCGGTAAGAAGAAAAGGACTCTGATTTTGATTGTGTTGGTTGCTTGTGGTTTCGGGTTGTTGGTTTTAATCGGTGGGATCTGGTTCTCATGGCACAAGTACGAAGAGTATATATTCAACAAGAGGCGAAAGGATGCTAATGATAGAATTGAGTCGGGTTTGGGTAATGCATTAGAGTCCATTAGTGGGAGTACTACTTTGGTTAAGTTCACATTCGAAGAGATTAGCAAGGCTACTAAGAATTTCTCTAGAGATAATATAATCGGGAGGGGAGGATATGGGAATGTGTACAAGGGCACTCTGGCTGATGGCTCTGAAGTTGCATTGAAGAGGTTCAAGAATTGCTCTGCTGCCGGTGATGCGAATTTCGCTCACGAGGTTGAGGTGATTGCGAGCGTTAGGCATGTCAATCTTGTGGCTTTGAGAGGTTATTGTACTGCGACGACGCATTTGGTAGGTCACCAGAGGATCATTGTGTGTGATTTGATGAAGAATGGGAGTCTCCATGACCATTTGTTTGGGACTTTTGAGAACAAGCTCAGTTGGCCAGTTCGGCAAAGGATTGCGCTAGGGACTGCGAGGGGGTTGGCTTATTTGCATGACGGGGCTCAACCGTCCATCATTCATAGGGATATTAAAGCAAATAACATACTTTTGGATGAGGATTTTGAGGCCAAAGTGGCGGATTTTGGACTTGCAAAGTTTACGCCTGAGGGAATGACACATTTGAGCACTAGGGTGGCTGGAACGATGGGTTATCTTGCTCCAGAGTATGCATTGTATGGGCAGTTGACGGAGAAAAGTGATGTTTATAGCTTTGGTGTTGTGATGCTTGAGCTTTTGAGTGGAAAGAAAGCACTCCATGTGAACAATGATAGTCAGCCGTCACTTGTGACGGATTGGGCATGGTCCATGGTGCGAGAAGGAAAAGCGCTGGATGTCATTGAAGATATGCCAGAGAAGGGTCCACCTGAAGTTTTAGAGAAGTATGTATTGGTTGCTGTTCTTTGTTCTCATCCACAGTTGTATGCTAGGCCAACAATGGATCAGGTTGTAAAAATGTTGGAAACAGACTTGTCAGTTCCCTCAATCCCGGAAAGGCCAATTCCCCTTGTGGCCGAGATTGATGATATAGAAAGATACAGCAGCAGTGGCTCAATTCAGCTCTCTAGTACAGGAGGCTTCCAGACTTACACATTTGAAAGTAGCCTTCCTCGTGACCATAAGGGAGACGGAGAAAGTTCAGGTTCAACAACGGAAGGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

639

Amino Acids

69.83

Weight (kDa)

5.69

Isoelectric Point (pI)

43.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	30 - 182	5e-37	SPARK
Pkinase	PF00069	300 - 570	8.9e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	302 - 572	3.6e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48010
fragaria_vesca	FvH4_2g24291 FvH4_2g24291 FvH4_6g05000 FvH4_6g05020
malus_domestica	MD03G1272600.v1.1 MD04G1211500.v1.1 MD11G1293500.v1.1 MD12G1226500.v1.1
prunus_persica	Prupe.6G332100_v2.0.a1 Prupe.6G332200_v2.0.a1 Prupe.8G248800_v2.0.a1
pyrus_communis	pycom03g21710 pycom11g25970
rosa_chinensis	RchiOBHm_Chr3g0453511 RchiOBHm_Chr3g0453521 RchiOBHm_Chr5g0002211 RchiOBHm_Chr6g0292151
rosa_laevigata	RLG00000012057 RLG00000025506 RLG00000025507 RLG00000031008
rosa_multiflora	Rmu_co8460761.1_g000001 Rmu_sc0000510.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073750 Rroxscaffold_2G00125960 Rroxscaffold_6G00430490 Rroxscaffold_7G00175400
rosa_rugosa	Rorug02G0649700 Rorug02G0649800 Rorug06G0223800
rosa_samantha	Rh1BG359400 Rh3AG052600 Rh3AG052700 Rh3BG054100 Rh3BG054200 Rh3CG053400 Rh3CG053500 Rh3DG054200 Rh3DG054300 Rh6AG337200 Rh6BG344400 Rh6CG351200 Rh6DG337400 Rh7BG191800
rosa_wichuraiana	Rw3G004050 Rw3G004060 Rw6G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	335
AasI	GACNNNNNNGTC	1 cut(s)	299
Acc36I	ACCTGC	1 cut(s)	335
AccB7I	CCANNNNNTGG	1 cut(s)	166
AccBSI	CCGCTC	2 cut(s)	25, 103
AccII	CGCG	1 cut(s)	575
AclWI	GGATC	5 cut(s)	109, 356, 737, 1127, 1704
AcoI	YGGCCR	4 cut(s)	3, 403, 1196, 1767
AcsI	RAATTY	3 cut(s)	296, 892, 1015
AcuI	CTGAAG	2 cut(s)	987, 1644
AcyI	GRCGYC	2 cut(s)	423, 644
AfaI	GTAC	6 cut(s)	179, 752, 844, 941, 1087, 1825
AfeI	AGCGCT	1 cut(s)	1584
AfiI	CCNNNNNNNGG	5 cut(s)	166, 391, 653, 837, 1613
AgsI	TTSAA	6 cut(s)	769, 979, 988, 1598, 1853, 1902
AjnI	CCWGG	2 cut(s)	344, 354
AjuI	GAANNNNNNNTTGG	4 cut(s)	371, 403, 1628, 1660
AleI	CACNNNNGTG	1 cut(s)	1388
AluBI	AGCT	6 cut(s)	223, 651, 1189, 1467, 1489, 1816
AluI	AGCT	6 cut(s)	223, 651, 1189, 1467, 1489, 1816
Alw21I	GWGCWC	1 cut(s)	1385
Alw26I	GTCTC	4 cut(s)	332, 541, 1157, 1875
AlwI	GGATC	5 cut(s)	109, 356, 737, 1127, 1704
Ama87I	CYCGRG	1 cut(s)	449
Aor51HI	AGCGCT	1 cut(s)	1584
ApeKI	GCWGC	5 cut(s)	121, 360, 543, 1001, 1797
ApoI	RAATTY	3 cut(s)	296, 892, 1015
ArsI	GACNNNNNNTTYG	6 cut(s)	661, 693, 1084, 1116, 1151, 1183
Asp700I	GAANNNNTTC	1 cut(s)	983
AspLEI	GCGC	5 cut(s)	147, 470, 631, 1219, 1585
AspS9I	GGNCC	6 cut(s)	270, 382, 394, 593, 1560, 1616
AsuC2I	CCSGG	2 cut(s)	135, 1745
AsuHPI	GGTGA	6 cut(s)	79, 217, 364, 1019, 1048, 1103
AsuII	TTCGAA	1 cut(s)	867
AvaI	CYCGRG	1 cut(s)	449
AvaII	GGWCC	4 cut(s)	270, 394, 1560, 1616
AxyI	CCTNAGG	1 cut(s)	1362
BaeGI	GKGCMC	2 cut(s)	101, 950
BalI	TGGCCA	2 cut(s)	5, 1198
BanII	GRGCYC	1 cut(s)	1261
BauI	CACGAG	2 cut(s)	1025, 1866
Bbv12I	GWGCWC	1 cut(s)	1385
BbvI	GCAGC	5 cut(s)	133, 347, 530, 988, 1809
BccI	CCATC	4 cut(s)	533, 953, 1277, 1396
BceAI	ACGGC	4 cut(s)	436, 607, 622, 1519
BciT130I	CCWGG	2 cut(s)	346, 356
BcnI	CCSGG	2 cut(s)	135, 1745
BcoDI	GTCTC	4 cut(s)	332, 541, 1157, 1875
BfaI	CTAG	6 cut(s)	416, 900, 1220, 1386, 1683, 1821
BfmI	CTRYAG	1 cut(s)	119
BfoI	RGCGCY	2 cut(s)	148, 1586
BfuAI	ACCTGC	1 cut(s)	335
BglI	GCCNNNNNGGC	2 cut(s)	1204, 1331
BisI	GCNGC	9 cut(s)	122, 331, 361, 471, 544, 570, 573, 1002, 1798
BlsI	GCNGC	9 cut(s)	123, 332, 362, 472, 545, 571, 574, 1003, 1799
BmcAI	AGTACT	1 cut(s)	844
Bme1390I	CCNGG	4 cut(s)	135, 346, 356, 1745
Bme18I	GGWCC	4 cut(s)	270, 394, 1560, 1616
BmeT110I	CYCGRG	1 cut(s)	449
BmgT120I	GGNCC	6 cut(s)	270, 382, 394, 593, 1560, 1616
BmiI	GGNNCC	2 cut(s)	139, 1617
BmrFI	CCNGG	4 cut(s)	135, 346, 356, 1745
BmsI	GCATC	3 cut(s)	775, 1000, 1470
BplI	GAGNNNNNCTC	2 cut(s)	443, 475
BpmI	CTGGAG	4 cut(s)	48, 203, 475, 1401
Bpu14I	TTCGAA	1 cut(s)	867
BpuEI	CTTGAG	1 cut(s)	1505
BpuMI	CCSGG	2 cut(s)	135, 1745
BsaHI	GRCGYC	2 cut(s)	423, 644
BsaI	GGTCTC	1 cut(s)	332
BsaJI	CCNNGG	6 cut(s)	133, 187, 354, 355, 378, 1563
BsaWI	WCCGGW	2 cut(s)	515, 653
BsaXI	ACNNNNNCTCC	6 cut(s)	122, 152, 161, 191, 305, 335
Bsc4I	CCNNNNNNNGG	5 cut(s)	166, 391, 653, 837, 1613
Bse118I	RCCGGY	2 cut(s)	227, 1004
Bse1I	ACTGG	4 cut(s)	65, 175, 442, 1199
Bse21I	CCTNAGG	1 cut(s)	1362
BseBI	CCWGG	2 cut(s)	346, 356
BseDI	CCNNGG	6 cut(s)	133, 187, 354, 355, 378, 1563
BseGI	GGATG	6 cut(s)	11, 180, 790, 1315, 1594, 1666
BseLI	CCNNNNNNNGG	5 cut(s)	166, 391, 653, 837, 1613
BseMII	CTCAG	2 cut(s)	1204, 1353
BseNI	ACTGG	4 cut(s)	65, 175, 442, 1199
BseSI	GKGCMC	2 cut(s)	101, 950
BseXI	GCAGC	5 cut(s)	133, 347, 530, 988, 1809
BseYI	CCCAGC	2 cut(s)	75, 647
BsgI	GTGCAG	2 cut(s)	460, 529
Bsh1236I	CGCG	1 cut(s)	575
Bsh1285I	CGRYCG	1 cut(s)	600
BsiEI	CGRYCG	1 cut(s)	600
BsiHKAI	GWGCWC	1 cut(s)	1385
BsiHKCI	CYCGRG	1 cut(s)	449
BsiSI	CCGG	7 cut(s)	135, 228, 516, 540, 654, 1005, 1745
BslFI	GGGAC	2 cut(s)	1186, 1237
BslI	CCNNNNNNNGG	5 cut(s)	166, 391, 653, 837, 1613
BsmAI	GTCTC	4 cut(s)	332, 541, 1157, 1875
BsmBI	CGTCTC	2 cut(s)	541, 1875
BsmFI	GGGAC	2 cut(s)	1186, 1237
Bso31I	GGTCTC	1 cut(s)	332
BsoBI	CYCGRG	1 cut(s)	449
Bsp119I	TTCGAA	1 cut(s)	867
Bsp1286I	GDGCHC	4 cut(s)	101, 950, 1261, 1385
Bsp1407I	TGTACA	1 cut(s)	939
Bsp143I	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
Bsp19I	CCATGG	1 cut(s)	1563
BspCNI	CTCAG	2 cut(s)	1203, 1354
BspFNI	CGCG	1 cut(s)	575
BspLI	GGNNCC	2 cut(s)	139, 1617
BspMAI	CTGCAG	1 cut(s)	123
BspMI	ACCTGC	1 cut(s)	335
BspPI	GGATC	5 cut(s)	109, 356, 737, 1127, 1704
BspQI	GCTCTTC	1 cut(s)	32
BspT104I	TTCGAA	1 cut(s)	867
BspTNI	GGTCTC	1 cut(s)	332
BsrBI	CCGCTC	2 cut(s)	25, 103
BsrFI	RCCGGY	2 cut(s)	227, 1004
BsrGI	TGTACA	1 cut(s)	939
BsrI	ACTGG	4 cut(s)	65, 175, 442, 1199
BssAI	RCCGGY	2 cut(s)	227, 1004
BssECI	CCNNGG	6 cut(s)	133, 187, 354, 355, 378, 1563
BssMI	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
BssNI	GRCGYC	2 cut(s)	423, 644
BssSI	CACGAG	2 cut(s)	1025, 1866
BssT1I	CCWWGG	3 cut(s)	187, 378, 1563
Bst2BI	CACGAG	2 cut(s)	1025, 1866
Bst2UI	CCWGG	2 cut(s)	346, 356
Bst4CI	ACNGT	3 cut(s)	91, 1266, 1674
Bst6I	CTCTTC	4 cut(s)	32, 750, 864, 974
BstACI	GRCGYC	2 cut(s)	423, 644
BstAUI	TGTACA	1 cut(s)	939
BstBI	TTCGAA	1 cut(s)	867
BstC8I	GCNNGC	3 cut(s)	101, 475, 1045
BstDEI	CTNAG	3 cut(s)	888, 1190, 1362
BstDSI	CCRYGG	1 cut(s)	1563
BstEII	GGTNACC	1 cut(s)	1109
BstF5I	GGATG	6 cut(s)	11, 180, 790, 1315, 1594, 1666
BstFNI	CGCG	1 cut(s)	575
BstH2I	RGCGCY	2 cut(s)	148, 1586
BstHHI	GCGC	5 cut(s)	147, 470, 631, 1219, 1585
BstKTI	GATC	6 cut(s)	117, 351, 604, 732, 1122, 1699
BstMAI	GTCTC	4 cut(s)	332, 541, 1157, 1875
BstMBI	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
BstMCI	CGRYCG	1 cut(s)	600
BstNI	CCWGG	2 cut(s)	346, 356
BstNSI	RCATGY	1 cut(s)	1058
BstPI	GGTNACC	1 cut(s)	1109
BstSCI	CCNGG	4 cut(s)	133, 344, 354, 1743
BstSFI	CTRYAG	1 cut(s)	119
BstSLI	GKGCMC	2 cut(s)	101, 950
BstUI	CGCG	1 cut(s)	575
BstV1I	GCAGC	5 cut(s)	133, 347, 530, 988, 1809
BstX2I	RGATCY	2 cut(s)	348, 729
BstXI	CCANNNNNNTGG	1 cut(s)	1169
BstYI	RGATCY	2 cut(s)	348, 729
Bsu36I	CCTNAGG	1 cut(s)	1362
BtgI	CCRYGG	1 cut(s)	1563
BtsCI	GGATG	6 cut(s)	11, 180, 790, 1315, 1594, 1666
BtsI	GCAGTG	1 cut(s)	1807
BtsIMutI	CAGTG	1 cut(s)	1807
BveI	ACCTGC	1 cut(s)	335
Cac8I	GCNNGC	3 cut(s)	101, 475, 1045
CfoI	GCGC	5 cut(s)	147, 470, 631, 1219, 1585
Cfr10I	RCCGGY	2 cut(s)	227, 1004
Cfr13I	GGNCC	6 cut(s)	270, 382, 394, 593, 1560, 1616
CseI	GACGC	3 cut(s)	412, 652, 1105
Csp6I	GTAC	6 cut(s)	178, 751, 843, 940, 1086, 1824
CviQI	GTAC	6 cut(s)	178, 751, 843, 940, 1086, 1824
DdeI	CTNAG	3 cut(s)	888, 1190, 1362
DpnI	GATC	6 cut(s)	116, 350, 603, 731, 1121, 1698
DpnII	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
DrdI	GACNNNNNNGTC	1 cut(s)	299
DseDI	GACNNNNNNGTC	1 cut(s)	299
EaeI	YGGCCR	4 cut(s)	3, 403, 1196, 1767
Eam1104I	CTCTTC	4 cut(s)	32, 750, 864, 974
EarI	CTCTTC	4 cut(s)	32, 750, 864, 974
EciI	GGCGGA	4 cut(s)	185, 262, 490, 1349
Eco130I	CCWWGG	3 cut(s)	187, 378, 1563
Eco147I	AGGCCT	1 cut(s)	192
Eco24I	GRGCYC	1 cut(s)	1261
Eco31I	GGTCTC	1 cut(s)	332
Eco47I	GGWCC	4 cut(s)	270, 394, 1560, 1616
Eco47III	AGCGCT	1 cut(s)	1584
Eco57I	CTGAAG	2 cut(s)	987, 1644
Eco81I	CCTNAGG	1 cut(s)	1362
Eco88I	CYCGRG	1 cut(s)	449
Eco91I	GGTNACC	1 cut(s)	1109
EcoO109I	RGGNCCY	1 cut(s)	394
EcoO65I	GGTNACC	1 cut(s)	1109
EcoRII	CCWGG	2 cut(s)	344, 354
EcoT14I	CCWWGG	3 cut(s)	187, 378, 1563
EcoT22I	ATGCAT	2 cut(s)	823, 1429
EcoT38I	GRGCYC	1 cut(s)	1261
ErhI	CCWWGG	3 cut(s)	187, 378, 1563
Esp3I	CGTCTC	2 cut(s)	541, 1875
FalI	AAGNNNNNCTT	2 cut(s)	608, 640
FaqI	GGGAC	2 cut(s)	1186, 1237
FauI	CCCGC	3 cut(s)	30, 108, 252
Fnu4HI	GCNGC	9 cut(s)	122, 331, 361, 471, 544, 570, 573, 1002, 1798
FokI	GGATG	5 cut(s)	167, 797, 1322, 1601, 1653
FriOI	GRGCYC	1 cut(s)	1261
Fsp4HI	GCNGC	9 cut(s)	122, 331, 361, 471, 544, 570, 573, 1002, 1798
FspBI	CTAG	6 cut(s)	416, 900, 1220, 1386, 1683, 1821
GlaI	GCGC	5 cut(s)	146, 469, 630, 1218, 1584
GluI	GCNGC	9 cut(s)	122, 331, 361, 471, 544, 570, 573, 1002, 1798
GsaI	CCCAGC	2 cut(s)	79, 651
GsuI	CTGGAG	4 cut(s)	48, 203, 475, 1401
HaeII	RGCGCY	2 cut(s)	148, 1586
HapII	CCGG	7 cut(s)	135, 228, 516, 540, 654, 1005, 1745
HgaI	GACGC	3 cut(s)	412, 652, 1105
HhaI	GCGC	5 cut(s)	147, 470, 631, 1219, 1585
Hin1I	GRCGYC	2 cut(s)	423, 644
Hin6I	GCGC	5 cut(s)	145, 468, 629, 1217, 1583
HinP1I	GCGC	5 cut(s)	145, 468, 629, 1217, 1583
HincII	GTYRAC	2 cut(s)	60, 1443
HindII	GTYRAC	2 cut(s)	60, 1443
HinfI	GANTC	7 cut(s)	206, 260, 521, 670, 803, 827, 1150
HpaII	CCGG	7 cut(s)	135, 228, 516, 540, 654, 1005, 1745
HphI	GGTGA	6 cut(s)	79, 217, 364, 1019, 1048, 1103
Hpy166II	GTNNAC	7 cut(s)	60, 861, 940, 1356, 1443, 1519, 1619
Hpy188I	TCNGA	3 cut(s)	259, 675, 967
Hpy8I	GTNNAC	7 cut(s)	60, 861, 940, 1356, 1443, 1519, 1619
Hpy99I	CGWCG	8 cut(s)	206, 305, 404, 428, 562, 646, 1096, 1099
HpyAV	CCTTC	4 cut(s)	1568, 1606, 1871, 1904
HpyCH4III	ACNGT	3 cut(s)	91, 1266, 1674
HpyCH4IV	ACGT	2 cut(s)	84, 534
HpyF3I	CTNAG	3 cut(s)	888, 1190, 1362
HpySE526I	ACGT	2 cut(s)	84, 534
Hsp92I	GRCGYC	2 cut(s)	423, 644
HspAI	GCGC	5 cut(s)	145, 468, 629, 1217, 1583
Kzo9I	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
LguI	GCTCTTC	1 cut(s)	32
LmnI	GCTCC	4 cut(s)	143, 326, 656, 1420
Lsp1109I	GCAGC	5 cut(s)	133, 347, 530, 988, 1809
LweI	GCATC	3 cut(s)	775, 1000, 1470
MaeI	CTAG	6 cut(s)	416, 900, 1220, 1386, 1683, 1821
MaeII	ACGT	2 cut(s)	84, 534
MaeIII	GTNAC	5 cut(s)	85, 1109, 1536, 1543, 1868
MalI	GATC	6 cut(s)	116, 350, 603, 731, 1121, 1698
MbiI	CCGCTC	2 cut(s)	25, 103
MboI	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
MboII	GAAGA	7 cut(s)	19, 673, 767, 881, 991, 1153, 1610
MflI	RGATCY	2 cut(s)	348, 729
MhlI	GDGCHC	4 cut(s)	101, 950, 1261, 1385
MlsI	TGGCCA	2 cut(s)	5, 1198
MluCI	AATT	8 cut(s)	296, 386, 798, 892, 991, 1015, 1755, 1809
MluNI	TGGCCA	2 cut(s)	5, 1198
MlyI	GAGTC	5 cut(s)	254, 664, 812, 836, 1159
MmeI	TCCRAC	3 cut(s)	282, 456, 1695
Mox20I	TGGCCA	2 cut(s)	5, 1198
Mph1103I	ATGCAT	2 cut(s)	823, 1429
MroXI	GAANNNNTTC	1 cut(s)	983
MscI	TGGCCA	2 cut(s)	5, 1198
MseI	TTAA	3 cut(s)	719, 855, 1287
MslI	CAYNNNNRTG	1 cut(s)	1388
Msp20I	TGGCCA	2 cut(s)	5, 1198
MspI	CCGG	7 cut(s)	135, 228, 516, 540, 654, 1005, 1745
MspR9I	CCNGG	4 cut(s)	135, 346, 356, 1745
MvaI	CCWGG	2 cut(s)	346, 356
MvnI	CGCG	1 cut(s)	575
NciI	CCSGG	2 cut(s)	135, 1745
NcoI	CCATGG	1 cut(s)	1563
NdeII	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
NlaIV	GGNNCC	2 cut(s)	139, 1617
NmeAIII	GCCGAG	1 cut(s)	1795
NmuCI	GTSAC	5 cut(s)	85, 1109, 1536, 1543, 1868
NsiI	ATGCAT	2 cut(s)	823, 1429
NspI	RCATGY	1 cut(s)	1058
NspV	TTCGAA	1 cut(s)	867
OliI	CACNNNNGTG	1 cut(s)	1388
PaeR7I	CTCGAG	1 cut(s)	449
PaqCI	CACCTGC	1 cut(s)	335
PasI	CCCWGGG	1 cut(s)	355
PceI	AGGCCT	1 cut(s)	192
PciSI	GCTCTTC	1 cut(s)	32
PcsI	WCGNNNNNNNCGW	3 cut(s)	309, 396, 597
PdmI	GAANNNNTTC	1 cut(s)	983
PfeI	GAWTC	2 cut(s)	206, 521
PflFI	GACNNNGTC	2 cut(s)	398, 422
PflMI	CCANNNNNTGG	1 cut(s)	166
PfoI	TCCNGGA	2 cut(s)	344, 1743
PkrI	GCNGC	9 cut(s)	123, 332, 362, 472, 545, 571, 574, 1003, 1799
PleI	GAGTC	5 cut(s)	254, 664, 811, 835, 1158
PpsI	GAGTC	5 cut(s)	254, 664, 811, 835, 1158
PpuMI	RGGWCCY	1 cut(s)	394
Psp5II	RGGWCCY	1 cut(s)	394
Psp6I	CCWGG	2 cut(s)	344, 354
PspEI	GGTNACC	1 cut(s)	1109
PspFI	CCCAGC	2 cut(s)	75, 647
PspGI	CCWGG	2 cut(s)	344, 354
PspN4I	GGNNCC	2 cut(s)	139, 1617
PspPI	GGNCC	6 cut(s)	270, 382, 394, 593, 1560, 1616
PspPPI	RGGWCCY	1 cut(s)	394
PstI	CTGCAG	1 cut(s)	123
PsuI	RGATCY	2 cut(s)	348, 729
PsyI	GACNNNGTC	2 cut(s)	398, 422
RsaI	GTAC	6 cut(s)	179, 752, 844, 941, 1087, 1825
RsaNI	GTAC	6 cut(s)	178, 751, 843, 940, 1086, 1824
RseI	CAYNNNNRTG	1 cut(s)	1388
SapI	GCTCTTC	1 cut(s)	32
SaqAI	TTAA	3 cut(s)	719, 855, 1287
SatI	GCNGC	9 cut(s)	122, 331, 361, 471, 544, 570, 573, 1002, 1798
Sau3AI	GATC	6 cut(s)	114, 348, 601, 729, 1119, 1696
Sau96I	GGNCC	6 cut(s)	270, 382, 394, 593, 1560, 1616
ScaI	AGTACT	1 cut(s)	844
SchI	GAGTC	5 cut(s)	254, 664, 812, 836, 1159
ScrFI	CCNGG	4 cut(s)	135, 346, 356, 1745
SduI	GDGCHC	4 cut(s)	101, 950, 1261, 1385
SfaNI	GCATC	3 cut(s)	775, 1000, 1470
SfcI	CTRYAG	1 cut(s)	119
Sfr274I	CTCGAG	1 cut(s)	449
SfuI	TTCGAA	1 cut(s)	867
SinI	GGWCC	4 cut(s)	270, 394, 1560, 1616
SlaI	CTCGAG	1 cut(s)	449
SmiMI	CAYNNNNRTG	1 cut(s)	1388
SmlI	CTYRAG	2 cut(s)	449, 1484
SmoI	CTYRAG	2 cut(s)	449, 1484
Sse9I	AATT	8 cut(s)	296, 386, 798, 892, 991, 1015, 1755, 1809
SseBI	AGGCCT	1 cut(s)	192
SspMI	CTAG	6 cut(s)	416, 900, 1220, 1386, 1683, 1821
StuI	AGGCCT	1 cut(s)	192
StyD4I	CCNGG	4 cut(s)	133, 344, 354, 1743
StyI	CCWWGG	3 cut(s)	187, 378, 1563
TaaI	ACNGT	3 cut(s)	91, 1266, 1674
TaiI	ACGT	2 cut(s)	87, 537
TaqI	TCGA	9 cut(s)	129, 204, 312, 336, 390, 450, 560, 633, 867
TaqII	GACCGA	1 cut(s)	614
TasI	AATT	8 cut(s)	296, 386, 798, 892, 991, 1015, 1755, 1809
TatI	WGTACW	5 cut(s)	177, 842, 939, 1085, 1823
TauI	GCSGC	4 cut(s)	333, 473, 572, 575
TfiI	GAWTC	2 cut(s)	206, 521
Tru1I	TTAA	3 cut(s)	719, 855, 1287
Tru9I	TTAA	3 cut(s)	719, 855, 1287
TscAI	CASTG	1 cut(s)	1807
TseFI	GTSAC	5 cut(s)	85, 1109, 1536, 1543, 1868
TseI	GCWGC	5 cut(s)	121, 360, 543, 1001, 1797
Tsp45I	GTSAC	5 cut(s)	85, 1109, 1536, 1543, 1868
TspDTI	ATGAA	4 cut(s)	170, 380, 1154, 1265
TspGWI	ACGGA	4 cut(s)	84, 1460, 1562, 1899
TspRI	CASTG	1 cut(s)	1807
Tth111I	GACNNNGTC	2 cut(s)	398, 422
Van91I	CCANNNNNTGG	1 cut(s)	166
VpaK11BI	GGWCC	4 cut(s)	270, 394, 1560, 1616
XapI	RAATTY	3 cut(s)	296, 892, 1015
XbaI	TCTAGA	1 cut(s)	899
XceI	RCATGY	1 cut(s)	1058
XhoI	CTCGAG	1 cut(s)	449
XmnI	GAANNNNTTC	1 cut(s)	983
XspI	CTAG	6 cut(s)	416, 900, 1220, 1386, 1683, 1821
ZrmI	AGTACT	1 cut(s)	844
Zsp2I	ATGCAT	2 cut(s)	823, 1429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.