Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0001738

Physical Location & Seq

Genomic Coordinates Forward (+)

50613380 .. 50615236

Gene Structure 1857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00430490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGCTGCTCTTCTTCTTCTTCTTCTTCTACCTCTATCTTGGATCAGTACCAATTAGCTTTCCTAGCTGTGGCTTCTTCCTTGTTAGTGGCCAAGAAACCCCCCCACGTACAGAGTTGGGTATTTTTTCATGTCCATTGAACATTGAGGCTCTCAGAGAATTAATCTTCGAAGGTGCTCCGAAAGTTCTTGATGTCCAGACTGAGTGCCAGTACATCCTCGAAGGAATCCGATTGCTTCGATCGGATTATCTCCGATCCACCGGGTACTTTTCCCCACCTTCCTATACCATAATCCCATGCTGGGATGCATACCAAGCTTTGATCAGCGAATCCATACCCGATTTAAAAATTGGATCCACTTGTGGGTTTAAGCCCGCTTTGCTGTCAGAGACTTGTATGAATATCACAACCCGGTCTCAATTTGAAAGGTTGGTTCCCAAATCAGAATTGCAGGTAATTGAGGATGCTTGTAGCCGGTCTCTAGATGATTATTCCCCTTGTTTTTCGTGTAGGCGCATTTTGTCGGGTCTGAATATGTCTCATTTTGGTAGAGGGTATGATGGGAATGTAGCAGATTGCAATGGATATCCATATATTTATGCTGCAGCTTTTGGTAATAGGAAGGGACCAATAAATTTGAGTACAGCCAAGTGTTTGTTCTCACTAAACTTCAATTCTTTTGATAGAAAAACTAAAAACAAGCACAGGGTTTTGCTTTGGGCTGTGTTGATAGGAAGTGTGTGTGGATTCACTGTGGCATTTTTGGTGGTTTGGGTTCTTTGGGGGAGGCATAGGAGAAGGAATAAGAAGATGAAGGATCAAAGTGAGACGACGGGGTTTGTTTCCGCCATAGAAATTATAGGTGAGAATACCAGCTTGGCAAGGTTCCCATTTGAGGAACTTAAAAAGGCCACGGAGAATTTCGCCAGGGAGAACATAATTGGGATTGGAGGTTATGGAAATGTGTACAAGGGTACATTGGCAGATGGGTCTGAAGTAGCTTTGAAAAGGTTCAAGAACTTGTCTGCTGCCGGAGATGTAATGTTTGCACATGAGTTGGAGGTTATTGCTAGCATTCGGCATGTGAATCTTGTCGCGGTGAGAGGCTATTGTAATATAAAAGTGCCTAGGCAAGGCCACCAAAGGATAATGGTGTGTGACTTGGTGAACAATGGAAGTCTCTACGAACATCTTTTCGATTCAAGGATGAAGAAGAAACAGCTCAGCTGGCCAATTCGTCAGAAGATTGCACTTGGAATGGCTCGCGGATTGGCTTATTTGCACTATGGAGTGCAGCCTGCTGTAATCCACAGAGATGTCAAAGCAAGCAATGTGCTTCTAGACGAAGAATTCGAGCCAAAACTGGCTGATTTTGGTTTAGCAAAGTTCACACCAGAAGGACAGACACATATGCACACAAGGGTGGCTGGGACATTTGGGTATGTTGCACCGGAGTATGCTTTGTATGGGCAGTTATCCGAAAGAAGCGATGTCTACAGTTTTGGAGTAGTGCTTCTTGAACTTTTGAGTGGAAAGAGAGCAGTTATCGAAGCTAGTGGTACCACAACTTTGCTTTTGGCAGATTGGGCTTGGTCACAAGTGAGGAAAGGCAGACCATTAGATGTTATAGACGAAAGCATTGAGAACTTAAGCTCTAAGGAAGTAATGGAAAACTATGTAATGGTTGCAGTTCTTTCTGCTCATCCAGAATCACATGCGAGGCCAACAATGGACCAAATTGTCAAGATATTGGAAAGGGATTTTCAAGTTCCCTCAAACATGGACGCCCCTATTCATAAAATCGATCAGTCGGCAAGCTCTAGTGGTTCAAGTTACATTTCAAGCAATACTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

618

Amino Acids

69.1

Weight (kDa)

8.09

Isoelectric Point (pI)

47.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	43 - 193	8.2e-29	SPARK
Pkinase	PF00069	309 - 581	4.4e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	311 - 583	6.2e-38	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48010
fragaria_vesca	FvH4_2g24291 FvH4_2g24291 FvH4_6g05000 FvH4_6g05020
malus_domestica	MD03G1272600.v1.1 MD04G1211500.v1.1 MD11G1293500.v1.1 MD12G1226500.v1.1
prunus_persica	Prupe.6G332100_v2.0.a1 Prupe.6G332200_v2.0.a1 Prupe.8G248800_v2.0.a1
pyrus_communis	pycom03g21710 pycom11g25970
rosa_chinensis	RchiOBHm_Chr3g0453511 RchiOBHm_Chr3g0453521 RchiOBHm_Chr5g0002211 RchiOBHm_Chr6g0292151
rosa_laevigata	RLG00000012057 RLG00000025506 RLG00000025507 RLG00000031008
rosa_multiflora	Rmu_co8460761.1_g000001 Rmu_sc0000510.1_g000020
rosa_roxburghii	Rroxscaffold_1G00073750 Rroxscaffold_2G00125960 Rroxscaffold_6G00430490 Rroxscaffold_7G00175400
rosa_rugosa	Rorug02G0649700 Rorug02G0649800 Rorug06G0223800
rosa_samantha	Rh1BG359400 Rh3AG052600 Rh3AG052700 Rh3BG054100 Rh3BG054200 Rh3CG053400 Rh3CG053500 Rh3DG054200 Rh3DG054300 Rh6AG337200 Rh6BG344400 Rh6CG351200 Rh6DG337400 Rh7BG191800
rosa_wichuraiana	Rw3G004050 Rw3G004060 Rw6G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1739
Acc36I	ACCTGC	1 cut(s)	442
Acc65I	GGTACC	1 cut(s)	1559
AccB1I	GGYRCC	1 cut(s)	1559
AccI	GTMKAC	1 cut(s)	1494
AccII	CGCG	2 cut(s)	1097, 1266
AciI	CCGC	4 cut(s)	375, 846, 1097, 1266
AclWI	GGATC	5 cut(s)	49, 249, 348, 361, 825
AcoI	YGGCCR	2 cut(s)	88, 1229
AcsI	RAATTY	3 cut(s)	634, 919, 1349
AcuI	CTGAAG	1 cut(s)	1014
AcyI	GRCGYC	1 cut(s)	1785
AfaI	GTAC	8 cut(s)	48, 109, 212, 266, 643, 968, 976, 1561
AfiI	CCNNNNNNNGG	5 cut(s)	68, 301, 363, 895, 1133
AflII	CTTAAG	1 cut(s)	1648
AjnI	CCWGG	1 cut(s)	926
AjuI	GAANNNNNNNTTGG	4 cut(s)	641, 673, 860, 892
AleI	CACNNNNGTG	1 cut(s)	1421
Alw21I	GWGCWC	1 cut(s)	178
Alw26I	GTCTC	6 cut(s)	383, 420, 483, 543, 821, 1184
AlwI	GGATC	5 cut(s)	49, 249, 348, 361, 825
AoxI	GGCC	5 cut(s)	88, 909, 1135, 1229, 1721
ApeKI	GCWGC	5 cut(s)	4, 602, 605, 1028, 1294
ApoI	RAATTY	3 cut(s)	634, 919, 1349
ArsI	GACNNNNNNTTYG	2 cut(s)	1334, 1366
AseI	ATTAAT	1 cut(s)	161
Asp700I	GAANNNNTTC	1 cut(s)	1010
Asp718I	GGTACC	1 cut(s)	1559
AspA2I	CCTAGG	1 cut(s)	1127
AspLEI	GCGC	1 cut(s)	516
AspS9I	GGNCC	2 cut(s)	626, 1732
AsuC2I	CCSGG	2 cut(s)	262, 412
AsuHPI	GGTGA	3 cut(s)	875, 1111, 1177
AsuII	TTCGAA	1 cut(s)	168
AsuNHI	GCTAGC	1 cut(s)	1070
AvaII	GGWCC	2 cut(s)	626, 1732
AvrII	CCTAGG	1 cut(s)	1127
BalI	TGGCCA	2 cut(s)	90, 1231
BamHI	GGATCC	1 cut(s)	353
BanI	GGYRCC	1 cut(s)	1559
Bbv12I	GWGCWC	1 cut(s)	178
BbvI	GCAGC	4 cut(s)	589, 617, 1015, 1306
BccI	CCATC	2 cut(s)	554, 980
BciT130I	CCWGG	1 cut(s)	928
BclI	TGATCA	1 cut(s)	321
BcnI	CCSGG	2 cut(s)	262, 412
BcoDI	GTCTC	6 cut(s)	383, 420, 483, 543, 821, 1184
BfaI	CTAG	7 cut(s)	63, 482, 1071, 1128, 1340, 1554, 1821
BfmI	CTRYAG	2 cut(s)	603, 1495
BfrI	CTTAAG	1 cut(s)	1648
BfuAI	ACCTGC	1 cut(s)	442
BisI	GCNGC	5 cut(s)	5, 603, 606, 1029, 1295
BlnI	CCTAGG	1 cut(s)	1127
BlpI	GCTNAGC	1 cut(s)	1223
BlsI	GCNGC	5 cut(s)	6, 604, 607, 1030, 1296
Bme1390I	CCNGG	3 cut(s)	262, 412, 928
Bme18I	GGWCC	2 cut(s)	626, 1732
BmgT120I	GGNCC	2 cut(s)	626, 1732
BmiI	GGNNCC	5 cut(s)	355, 435, 627, 887, 1561
BmrFI	CCNGG	3 cut(s)	262, 412, 928
BmsI	GCATC	2 cut(s)	295, 454
BmtI	GCTAGC	1 cut(s)	1074
Bpu1102I	GCTNAGC	1 cut(s)	1223
Bpu14I	TTCGAA	1 cut(s)	168
BpuMI	CCSGG	2 cut(s)	262, 412
Bsa29I	ATCGAT	1 cut(s)	1803
BsaAI	YACGTR	1 cut(s)	107
BsaHI	GRCGYC	1 cut(s)	1785
BsaI	GGTCTC	2 cut(s)	420, 483
BsaJI	CCNNGG	3 cut(s)	912, 927, 1127
BsaWI	WCCGGW	1 cut(s)	1450
Bsc4I	CCNNNNNNNGG	5 cut(s)	68, 301, 363, 895, 1133
Bse118I	RCCGGY	1 cut(s)	474
Bse1I	ACTGG	3 cut(s)	208, 1368, 1855
Bse3DI	GCAATG	2 cut(s)	586, 1336
BseBI	CCWGG	1 cut(s)	928
BseCI	ATCGAT	1 cut(s)	1803
BseDI	CCNNGG	3 cut(s)	912, 927, 1127
BseGI	GGATG	5 cut(s)	213, 310, 469, 1212, 1702
BseLI	CCNNNNNNNGG	5 cut(s)	68, 301, 363, 895, 1133
BseMI	GCAATG	2 cut(s)	586, 1336
BseMII	CTCAG	3 cut(s)	166, 192, 1237
BseNI	ACTGG	3 cut(s)	208, 1368, 1855
BseXI	GCAGC	4 cut(s)	589, 617, 1015, 1306
BseYI	CCCAGC	2 cut(s)	300, 1427
BsgI	GTGCAG	1 cut(s)	1313
Bsh1236I	CGCG	2 cut(s)	1097, 1266
Bsh1285I	CGRYCG	1 cut(s)	242
BshFI	GGCC	5 cut(s)	90, 911, 1137, 1231, 1723
BshNI	GGYRCC	1 cut(s)	1559
BshVI	ATCGAT	1 cut(s)	1803
BsiEI	CGRYCG	1 cut(s)	242
BsiHKAI	GWGCWC	1 cut(s)	178
BsiSI	CCGG	5 cut(s)	261, 412, 475, 1032, 1451
BslFI	GGGAC	2 cut(s)	639, 1444
BslI	CCNNNNNNNGG	5 cut(s)	68, 301, 363, 895, 1133
BsmAI	GTCTC	6 cut(s)	383, 420, 483, 543, 821, 1184
BsmBI	CGTCTC	1 cut(s)	821
BsmFI	GGGAC	2 cut(s)	639, 1444
BsmI	GAATGC	1 cut(s)	1074
BsnI	GGCC	5 cut(s)	90, 911, 1137, 1231, 1723
Bso31I	GGTCTC	2 cut(s)	420, 483
Bsp119I	TTCGAA	1 cut(s)	168
Bsp1286I	GDGCHC	1 cut(s)	178
Bsp1407I	TGTACA	1 cut(s)	966
Bsp143I	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
Bsp1720I	GCTNAGC	1 cut(s)	1223
BspACI	CCGC	4 cut(s)	375, 846, 1097, 1266
BspANI	GGCC	5 cut(s)	90, 911, 1137, 1231, 1723
BspCNI	CTCAG	3 cut(s)	165, 193, 1236
BspDI	ATCGAT	1 cut(s)	1803
BspFNI	CGCG	2 cut(s)	1097, 1266
BspLI	GGNNCC	5 cut(s)	355, 435, 627, 887, 1561
BspMAI	CTGCAG	1 cut(s)	607
BspMI	ACCTGC	1 cut(s)	442
BspOI	GCTAGC	1 cut(s)	1074
BspPI	GGATC	5 cut(s)	49, 249, 348, 361, 825
BspQI	GCTCTTC	1 cut(s)	14
BspT104I	TTCGAA	1 cut(s)	168
BspT107I	GGYRCC	1 cut(s)	1559
BspTI	CTTAAG	1 cut(s)	1648
BspTNI	GGTCTC	2 cut(s)	420, 483
BsrDI	GCAATG	2 cut(s)	586, 1336
BsrFI	RCCGGY	1 cut(s)	474
BsrGI	TGTACA	1 cut(s)	966
BsrI	ACTGG	3 cut(s)	208, 1368, 1855
BssAI	RCCGGY	1 cut(s)	474
BssECI	CCNNGG	3 cut(s)	912, 927, 1127
BssMI	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
BssNI	GRCGYC	1 cut(s)	1785
BssT1I	CCWWGG	1 cut(s)	1127
Bst2UI	CCWGG	1 cut(s)	928
Bst4CI	ACNGT	2 cut(s)	754, 1499
Bst6I	CTCTTC	1 cut(s)	14
BstACI	GRCGYC	1 cut(s)	1785
BstAFI	CTTAAG	1 cut(s)	1648
BstAUI	TGTACA	1 cut(s)	966
BstBAI	YACGTR	1 cut(s)	107
BstBI	TTCGAA	1 cut(s)	168
BstC8I	GCNNGC	7 cut(s)	375, 1072, 1229, 1264, 1299, 1327, 1816
BstDEI	CTNAG	4 cut(s)	152, 201, 1223, 1656
BstDSI	CCRYGG	1 cut(s)	912
BstENI	CCTNNNNNAGG	1 cut(s)	1131
BstF5I	GGATG	5 cut(s)	213, 310, 469, 1212, 1702
BstFNI	CGCG	2 cut(s)	1097, 1266
BstHHI	GCGC	1 cut(s)	516
BstKTI	GATC	7 cut(s)	44, 242, 257, 324, 356, 820, 1807
BstMAI	GTCTC	6 cut(s)	383, 420, 483, 543, 821, 1184
BstMBI	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
BstMCI	CGRYCG	1 cut(s)	242
BstMWI	GCNNNNNNNGC	5 cut(s)	63, 314, 379, 1228, 1586
BstNI	CCWGG	1 cut(s)	928
BstNSI	RCATGY	2 cut(s)	1085, 1718
BstSCI	CCNGG	3 cut(s)	260, 410, 926
BstSFI	CTRYAG	2 cut(s)	603, 1495
BstUI	CGCG	2 cut(s)	1097, 1266
BstV1I	GCAGC	4 cut(s)	589, 617, 1015, 1306
BstX2I	RGATCY	1 cut(s)	353
BstYI	RGATCY	1 cut(s)	353
Bsu15I	ATCGAT	1 cut(s)	1803
BsuRI	GGCC	5 cut(s)	90, 911, 1137, 1231, 1723
BsuTUI	ATCGAT	1 cut(s)	1803
BtgI	CCRYGG	1 cut(s)	912
BtgZI	GCGATG	1 cut(s)	1503
BtsCI	GGATG	5 cut(s)	213, 310, 469, 1212, 1702
BtsIMutI	CAGTG	1 cut(s)	750
BveI	ACCTGC	1 cut(s)	442
Cac8I	GCNNGC	7 cut(s)	375, 1072, 1229, 1264, 1299, 1327, 1816
CfoI	GCGC	1 cut(s)	516
Cfr10I	RCCGGY	1 cut(s)	474
Cfr13I	GGNCC	2 cut(s)	626, 1732
ClaI	ATCGAT	1 cut(s)	1803
CseI	GACGC	1 cut(s)	1793
Csp6I	GTAC	8 cut(s)	47, 108, 211, 265, 642, 967, 975, 1560
CviAII	CATG	6 cut(s)	129, 297, 1052, 1082, 1715, 1780
CviQI	GTAC	8 cut(s)	47, 108, 211, 265, 642, 967, 975, 1560
DdeI	CTNAG	4 cut(s)	152, 201, 1223, 1656
DpnI	GATC	7 cut(s)	43, 241, 256, 323, 355, 819, 1806
DpnII	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
DraI	TTTAAA	1 cut(s)	345
DrdI	GACNNNNNNGTC	1 cut(s)	1739
DseDI	GACNNNNNNGTC	1 cut(s)	1739
EaeI	YGGCCR	2 cut(s)	88, 1229
Eam1104I	CTCTTC	1 cut(s)	14
EarI	CTCTTC	1 cut(s)	14
EciI	GGCGGA	1 cut(s)	835
Eco130I	CCWWGG	1 cut(s)	1127
Eco31I	GGTCTC	2 cut(s)	420, 483
Eco32I	GATATC	1 cut(s)	587
Eco47I	GGWCC	2 cut(s)	626, 1732
Eco57I	CTGAAG	1 cut(s)	1014
EcoNI	CCTNNNNNAGG	1 cut(s)	1131
EcoRI	GAATTC	1 cut(s)	1349
EcoRII	CCWGG	1 cut(s)	926
EcoRV	GATATC	1 cut(s)	587
EcoT14I	CCWWGG	1 cut(s)	1127
EcoT22I	ATGCAT	1 cut(s)	310
ErhI	CCWWGG	1 cut(s)	1127
Esp3I	CGTCTC	1 cut(s)	821
FaeI	CATG	6 cut(s)	132, 300, 1055, 1085, 1718, 1783
FaqI	GGGAC	2 cut(s)	639, 1444
FatI	CATG	6 cut(s)	128, 296, 1051, 1081, 1714, 1779
FauI	CCCGC	1 cut(s)	382
FauNDI	CATATG	1 cut(s)	1410
FbaI	TGATCA	1 cut(s)	321
FblI	GTMKAC	1 cut(s)	1494
Fnu4HI	GCNGC	5 cut(s)	5, 603, 606, 1029, 1295
FokI	GGATG	5 cut(s)	200, 317, 476, 1219, 1689
Fsp4HI	GCNGC	5 cut(s)	5, 603, 606, 1029, 1295
FspBI	CTAG	7 cut(s)	63, 482, 1071, 1128, 1340, 1554, 1821
GlaI	GCGC	1 cut(s)	515
GluI	GCNGC	5 cut(s)	5, 603, 606, 1029, 1295
GsaI	CCCAGC	2 cut(s)	304, 1431
HaeIII	GGCC	5 cut(s)	90, 911, 1137, 1231, 1723
HapII	CCGG	5 cut(s)	261, 412, 475, 1032, 1451
HgaI	GACGC	1 cut(s)	1793
HhaI	GCGC	1 cut(s)	516
Hin1I	GRCGYC	1 cut(s)	1785
Hin1II	CATG	6 cut(s)	132, 300, 1055, 1085, 1718, 1783
Hin6I	GCGC	1 cut(s)	514
HinP1I	GCGC	1 cut(s)	514
HindIII	AAGCTT	1 cut(s)	315
HinfI	GANTC	6 cut(s)	225, 329, 747, 1087, 1199, 1709
HpaII	CCGG	5 cut(s)	261, 412, 475, 1032, 1451
HphI	GGTGA	3 cut(s)	875, 1111, 1177
Hpy166II	GTNNAC	4 cut(s)	967, 1168, 1389, 1495
Hpy188III	TCNNGA	8 cut(s)	188, 196, 482, 1015, 1340, 1517, 1706, 1744
Hpy8I	GTNNAC	4 cut(s)	967, 1168, 1389, 1495
Hpy99I	CGWCG	1 cut(s)	835
HpyAV	CCTTC	7 cut(s)	164, 215, 288, 616, 792, 808, 1391
HpyCH4III	ACNGT	2 cut(s)	754, 1499
HpyCH4IV	ACGT	1 cut(s)	106
HpyF10VI	GCNNNNNNNGC	5 cut(s)	63, 314, 379, 1228, 1586
HpyF3I	CTNAG	4 cut(s)	152, 201, 1223, 1656
HpySE526I	ACGT	1 cut(s)	106
Hsp92I	GRCGYC	1 cut(s)	1785
Hsp92II	CATG	6 cut(s)	132, 300, 1055, 1085, 1718, 1783
HspAI	GCGC	1 cut(s)	514
KpnI	GGTACC	1 cut(s)	1563
Ksp22I	TGATCA	1 cut(s)	321
Kzo9I	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
LguI	GCTCTTC	1 cut(s)	14
LmnI	GCTCC	1 cut(s)	181
Lsp1109I	GCAGC	4 cut(s)	589, 617, 1015, 1306
LweI	GCATC	2 cut(s)	295, 454
MaeI	CTAG	7 cut(s)	63, 482, 1071, 1128, 1340, 1554, 1821
MaeII	ACGT	1 cut(s)	106
MaeIII	GTNAC	3 cut(s)	1157, 1593, 1832
MalI	GATC	7 cut(s)	43, 241, 256, 323, 355, 819, 1806
MboI	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
MflI	RGATCY	1 cut(s)	353
MhlI	GDGCHC	1 cut(s)	178
MlsI	TGGCCA	2 cut(s)	90, 1231
MluNI	TGGCCA	2 cut(s)	90, 1231
MmeI	TCCRAC	1 cut(s)	1038
Mox20I	TGGCCA	2 cut(s)	90, 1231
Mph1103I	ATGCAT	1 cut(s)	310
MroXI	GAANNNNTTC	1 cut(s)	1010
MscI	TGGCCA	2 cut(s)	90, 1231
MseI	TTAA	5 cut(s)	161, 344, 369, 903, 1649
MslI	CAYNNNNRTG	2 cut(s)	1314, 1421
Msp20I	TGGCCA	2 cut(s)	90, 1231
MspA1I	CMGCKG	1 cut(s)	1227
MspCI	CTTAAG	1 cut(s)	1648
MspI	CCGG	5 cut(s)	261, 412, 475, 1032, 1451
MspR9I	CCNGG	3 cut(s)	262, 412, 928
Mva1269I	GAATGC	1 cut(s)	1074
MvaI	CCWGG	1 cut(s)	928
MvnI	CGCG	2 cut(s)	1097, 1266
MwoI	GCNNNNNNNGC	5 cut(s)	63, 314, 379, 1228, 1586
NciI	CCSGG	2 cut(s)	262, 412
NdeI	CATATG	1 cut(s)	1410
NdeII	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
NheI	GCTAGC	1 cut(s)	1070
NlaIII	CATG	6 cut(s)	132, 300, 1055, 1085, 1718, 1783
NlaIV	GGNNCC	5 cut(s)	355, 435, 627, 887, 1561
NmuCI	GTSAC	2 cut(s)	1157, 1593
NsiI	ATGCAT	1 cut(s)	310
NspI	RCATGY	2 cut(s)	1085, 1718
NspV	TTCGAA	1 cut(s)	168
OliI	CACNNNNGTG	1 cut(s)	1421
PciSI	GCTCTTC	1 cut(s)	14
PcsI	WCGNNNNNNNCGW	1 cut(s)	1350
PctI	GAATGC	1 cut(s)	1074
PdmI	GAANNNNTTC	1 cut(s)	1010
PfeI	GAWTC	6 cut(s)	225, 329, 747, 1087, 1199, 1709
PkrI	GCNGC	5 cut(s)	6, 604, 607, 1030, 1296
Ple19I	CGATCG	1 cut(s)	242
Ppu21I	YACGTR	1 cut(s)	107
PshBI	ATTAAT	1 cut(s)	161
Psp6I	CCWGG	1 cut(s)	926
PspFI	CCCAGC	2 cut(s)	300, 1427
PspGI	CCWGG	1 cut(s)	926
PspN4I	GGNNCC	5 cut(s)	355, 435, 627, 887, 1561
PspPI	GGNCC	2 cut(s)	626, 1732
PstI	CTGCAG	1 cut(s)	607
PsuI	RGATCY	1 cut(s)	353
PvuI	CGATCG	1 cut(s)	242
PvuII	CAGCTG	1 cut(s)	1227
RsaI	GTAC	8 cut(s)	48, 109, 212, 266, 643, 968, 976, 1561
RsaNI	GTAC	8 cut(s)	47, 108, 211, 265, 642, 967, 975, 1560
RseI	CAYNNNNRTG	2 cut(s)	1314, 1421
SapI	GCTCTTC	1 cut(s)	14
SaqAI	TTAA	5 cut(s)	161, 344, 369, 903, 1649
SatI	GCNGC	5 cut(s)	5, 603, 606, 1029, 1295
Sau3AI	GATC	7 cut(s)	41, 239, 254, 321, 353, 817, 1804
Sau96I	GGNCC	2 cut(s)	626, 1732
ScrFI	CCNGG	3 cut(s)	262, 412, 928
SduI	GDGCHC	1 cut(s)	178
SfaNI	GCATC	2 cut(s)	295, 454
SfcI	CTRYAG	2 cut(s)	603, 1495
SfuI	TTCGAA	1 cut(s)	168
SinI	GGWCC	2 cut(s)	626, 1732
SmiMI	CAYNNNNRTG	2 cut(s)	1314, 1421
SmlI	CTYRAG	1 cut(s)	1648
SmoI	CTYRAG	1 cut(s)	1648
SsiI	CCGC	4 cut(s)	375, 846, 1097, 1266
SspMI	CTAG	7 cut(s)	63, 482, 1071, 1128, 1340, 1554, 1821
StyD4I	CCNGG	3 cut(s)	260, 410, 926
StyI	CCWWGG	1 cut(s)	1127
TaaI	ACNGT	2 cut(s)	754, 1499
TaiI	ACGT	1 cut(s)	109
TaqI	TCGA	7 cut(s)	168, 219, 238, 1197, 1353, 1548, 1803
TatI	WGTACW	3 cut(s)	210, 641, 966
TfiI	GAWTC	6 cut(s)	225, 329, 747, 1087, 1199, 1709
Tru1I	TTAA	5 cut(s)	161, 344, 369, 903, 1649
Tru9I	TTAA	5 cut(s)	161, 344, 369, 903, 1649
TscAI	CASTG	1 cut(s)	757
TseFI	GTSAC	2 cut(s)	1157, 1593
TseI	GCWGC	5 cut(s)	4, 602, 605, 1028, 1294
Tsp45I	GTSAC	2 cut(s)	1157, 1593
TspDTI	ATGAA	5 cut(s)	117, 413, 827, 1223, 1784
TspGWI	ACGGA	1 cut(s)	929
TspRI	CASTG	1 cut(s)	757
Vha464I	CTTAAG	1 cut(s)	1648
VpaK11BI	GGWCC	2 cut(s)	626, 1732
VspI	ATTAAT	1 cut(s)	161
XagI	CCTNNNNNAGG	1 cut(s)	1131
XapI	RAATTY	3 cut(s)	634, 919, 1349
XbaI	TCTAGA	2 cut(s)	481, 1339
XceI	RCATGY	2 cut(s)	1085, 1718
XmaJI	CCTAGG	1 cut(s)	1127
XmiI	GTMKAC	1 cut(s)	1494
XmnI	GAANNNNTTC	1 cut(s)	1010
XspI	CTAG	7 cut(s)	63, 482, 1071, 1128, 1340, 1554, 1821
Zsp2I	ATGCAT	1 cut(s)	310

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.