FvH4_4g13500

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0001790
Physical Location & Seq
Reverse (-)
17096990 .. 17102510
5521 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g13500.t1

Sequence Viewer

Length: 1860 bp
ATGGCTTCAGATGAGGAAATAGATAGCCTGTTTGAAAATGCGATGAAAGGACAATGGGAAAAGGTCAGGGAGGCCTACAGAAACAGTATCAAGGCTCAAAAAGCCAAGATCACCAGGTCCAAAGAGACTGCTCTACACATAGCCATAGCAGATGGCCAAACCGAAATCGCACTGGAGTTGGTCAAAATTATTCCCAGTAATGCAGACGACAGTGACGCTTCAACGGCGGTACTCAGCATAGCAAACGACAGAGGCAACACGCCGCTACATCTAGCTGCTCGGATTGGGAATGTACAAGTGTGCCGTAGCATTGCTGACAAGGCGGCGAGCCTCGTCTCCCTTCGAAATGTGGAGGGAGAGACACCTCTCTTCTTGGCAGCTCTTAATGGTAACACAAAGGCTTTTGTTTGCCTTAATTTCTATTGCCCAGAAAAACAGCACTCCTTGATTAGGGACAACAATGGGGATACCATCCTTCATGCCGCAATCTTGGGTGAATACTTCAGTTTGGCATTTCAGATAATTAAGTTGTACCCAGAACTAGTGAACTCTATGAATCAAGATGGTTTGTCTCCCCTGCATATTCTAGCCAGTAAGCCAAATGCATTCAAAAGCAGCTGTCGACTCGGGCTCAGTGGTCATCTTATATACCAATGTTTGATGGTTGAAGAACTCAAAGTGGAAGAATATAACCATGAAGCTTGTCTTCCTAAGGCAGGAGACAGAGACAGTTTTTCATACCCAGAAAACTACCAAACATGCATGAACTTCTTCCAAGTTCTCAGAAGTTTGTTTCAAGTGTTAAGTAAAAAGAGGGGGGATAGGCATTGGGTGCAATTGTGGCATGGATACTCACATAAGACGCACAGCTCACTCCTTCAAGCTAATGGAGGAAATGAAAAGGGTACTAATGGTCCTGTTGGTGATGAAGAGAATCCCAAACAAGAGGCTACTCCAGGAGCATCAACTTCTGCACTGAGGTCACAATCAATAGATGCTACTAACGAAATATCAGATGGAAAGAGTTCAAGATCAACTAATGGTGCAAACCATCCAGAGAGAAATAGAGGAGAAAATCACCTGTTTCCACCCAATTATGTCTCATTTGTTTTGTTCTTCAAGTTTATGATGAAGGCCTTGCTAATCATTCTGGGAATTGGATTTTGGAGGATAAAGAAAATCCAAGAAAAGAAAGAGAGACATATATGGGCGAATCAGGTCATGAATGAATTGGTTGACCTTACTTCTTTATACAAATATCGAAATACTGGGCAAAATCCTCAAGAAACTAAAACAAGCAAAGATAAAGAAGAAGCCTATAATGCTATAATGCTAGACGAAGCCTCACCCTTACCATCTGATCATGCGGCACGTAACAGTACAGATACGCATATTGAGGCGATTACCTTTTCCTCAAGCCAGTACAATTATAAGCCAAGGAGTGATCAAAATGAGCCAGAGAGGAAGAACACCATTCCCTTCAGAGGTAAGAAGAATGGAATTGTAGCAGGGAAAAATCAGTCACCTATATTAATTGCAGCAAAGATGGGAGTAACTGAAATGGTGGAGAAAATCCTAGACAAATTTCCGGTGGCCATCCAGGATGTTGACTCTGATAACAAGAATGTTGTACTCTTAGCAGTTGAGAACAGGCAACCCCATGTTTACAATCTCCTTCAGAAGAGACAGATACTAAAGGAAAGCCTGTTGCGTCAGTTGGACAACAAAGGTAACAGTGCATTACATCTTGCTGCTACATGTGGTCAGTACCGGCCTTGGCTTATTCCAGGCGCGGCATTGCAAATGCAGTGGGAAATCAAGTGGTATAAGGTATGTCGTATAGTTGGTTTAATGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

620

Amino Acids

69.44

Weight (kDa)

8.5

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 35 - 109 1.1e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 82 - 134 3.2e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1431
AccI GTMKAC 1 cut(s) 622
AccII CGCG 1 cut(s) 1793
AciI CCGC 6 cut(s) 227, 263, 323, 483, 1367, 1793
AcoI YGGCCR 2 cut(s) 154, 1593
AcsI RAATTY 1 cut(s) 1583
AcuI CTGAAG 3 cut(s) 487, 1465, 1661
AfaI GTAC 8 cut(s) 231, 294, 533, 907, 1381, 1424, 1632, 1769
AfiI CCNNNNNNNGG 3 cut(s) 450, 716, 1484
AflIII ACRYGT 1 cut(s) 1757
AgsI TTSAA 8 cut(s) 35, 222, 610, 668, 797, 881, 1029, 1120
AhlI ACTAGT 1 cut(s) 541
AjnI CCWGG 4 cut(s) 113, 955, 1599, 1786
AjuI GAANNNNNNNTTGG 2 cut(s) 1147, 1179
AluBI AGCT 6 cut(s) 275, 380, 618, 701, 870, 884
AluI AGCT 6 cut(s) 275, 380, 618, 701, 870, 884
Alw26I GTCTC 9 cut(s) 119, 340, 353, 576, 714, 720, 1105, 1192, 1678
Ama87I CYCGRG 1 cut(s) 626
AoxI GGCC 5 cut(s) 72, 154, 1134, 1593, 1772
ApeKI GCWGC 5 cut(s) 275, 377, 615, 1538, 1751
ApoI RAATTY 1 cut(s) 1583
AseI ATTAAT 1 cut(s) 1532
Asp700I GAANNNNTTC 2 cut(s) 770, 1024
AspLEI GCGC 1 cut(s) 1793
AspS9I GGNCC 2 cut(s) 117, 914
AsuHPI GGTGA 6 cut(s) 103, 506, 935, 1070, 1338, 1515
AsuII TTCGAA 1 cut(s) 343
AvaI CYCGRG 1 cut(s) 626
AvaII GGWCC 2 cut(s) 117, 914
AxyI CCTNAGG 1 cut(s) 711
BalI TGGCCA 2 cut(s) 156, 1595
BanII GRGCYC 1 cut(s) 633
BbsI GAAGAC 1 cut(s) 698
BbvI GCAGC 5 cut(s) 262, 389, 627, 1550, 1738
BccI CCATC 9 cut(s) 146, 479, 557, 655, 1010, 1059, 1363, 1540, 1604
BceAI ACGGC 2 cut(s) 240, 288
BciT130I CCWGG 4 cut(s) 115, 957, 1601, 1788
BciVI GTATCC 2 cut(s) 460, 842
BclI TGATCA 2 cut(s) 1360, 1444
BcoDI GTCTC 9 cut(s) 119, 340, 353, 576, 714, 720, 1105, 1192, 1678
BcuI ACTAGT 1 cut(s) 541
BfaI CTAG 5 cut(s) 272, 542, 587, 1334, 1577
BfmI CTRYAG 1 cut(s) 76
BfuI GTATCC 2 cut(s) 460, 842
Bme1390I CCNGG 4 cut(s) 115, 957, 1601, 1788
Bme18I GGWCC 2 cut(s) 117, 914
BmeT110I CYCGRG 1 cut(s) 626
BmgT120I GGNCC 2 cut(s) 117, 914
BmrFI CCNGG 4 cut(s) 115, 957, 1601, 1788
BmrI ACTGGG 2 cut(s) 189, 1278
BmsI GCATC 2 cut(s) 971, 985
BmuI ACTGGG 2 cut(s) 189, 1278
BpiI GAAGAC 1 cut(s) 698
BpmI CTGGAG 2 cut(s) 194, 939
Bpu14I TTCGAA 1 cut(s) 343
BpuEI CTTGAG 2 cut(s) 1266, 1399
BsaAI YACGTR 1 cut(s) 1373
BsaJI CCNNGG 2 cut(s) 1436, 1775
BsaWI WCCGGW 1 cut(s) 1588
Bsc4I CCNNNNNNNGG 3 cut(s) 450, 716, 1484
Bse118I RCCGGY 1 cut(s) 1770
Bse1I ACTGG 5 cut(s) 177, 195, 591, 1273, 1420
Bse21I CCTNAGG 1 cut(s) 711
Bse3DI GCAATG 2 cut(s) 309, 1796
BseBI CCWGG 4 cut(s) 115, 957, 1601, 1788
BseDI CCNNGG 2 cut(s) 1436, 1775
BseGI GGATG 4 cut(s) 471, 1051, 1596, 1609
BseLI CCNNNNNNNGG 3 cut(s) 450, 716, 1484
BseMI GCAATG 2 cut(s) 309, 1796
BseMII CTCAG 4 cut(s) 247, 646, 796, 968
BseNI ACTGG 5 cut(s) 177, 195, 591, 1273, 1420
BseRI GAGGAG 1 cut(s) 1083
BseXI GCAGC 5 cut(s) 262, 389, 627, 1550, 1738
BsgI GTGCAG 1 cut(s) 957
Bsh1236I CGCG 1 cut(s) 1793
BshFI GGCC 5 cut(s) 74, 156, 1136, 1595, 1774
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 2 cut(s) 1589, 1771
BslFI GGGAC 1 cut(s) 467
BslI CCNNNNNNNGG 3 cut(s) 450, 716, 1484
BsmAI GTCTC 9 cut(s) 119, 340, 353, 576, 714, 720, 1105, 1192, 1678
BsmBI CGTCTC 1 cut(s) 340
BsmFI GGGAC 1 cut(s) 467
BsmI GAATGC 1 cut(s) 605
BsnI GGCC 5 cut(s) 74, 156, 1136, 1595, 1774
BsoBI CYCGRG 1 cut(s) 626
Bsp119I TTCGAA 1 cut(s) 343
Bsp1286I GDGCHC 1 cut(s) 633
Bsp1407I TGTACA 1 cut(s) 292
Bsp143I GATC 4 cut(s) 108, 1031, 1360, 1444
BspACI CCGC 6 cut(s) 227, 263, 323, 483, 1367, 1793
BspANI GGCC 5 cut(s) 74, 156, 1136, 1595, 1774
BspCNI CTCAG 4 cut(s) 246, 645, 795, 969
BspFNI CGCG 1 cut(s) 1793
BspHI TCATGA 1 cut(s) 1221
BspT104I TTCGAA 1 cut(s) 343
BsrDI GCAATG 2 cut(s) 309, 1796
BsrFI RCCGGY 1 cut(s) 1770
BsrGI TGTACA 1 cut(s) 292
BsrI ACTGG 5 cut(s) 177, 195, 591, 1273, 1420
BssAI RCCGGY 1 cut(s) 1770
BssECI CCNNGG 2 cut(s) 1436, 1775
BssMI GATC 4 cut(s) 108, 1031, 1360, 1444
BssT1I CCWWGG 2 cut(s) 1436, 1775
Bst2UI CCWGG 4 cut(s) 115, 957, 1601, 1788
Bst4CI ACNGT 5 cut(s) 86, 212, 731, 1379, 1736
Bst6I CTCTTC 3 cut(s) 374, 924, 1676
BstAPI GCANNNNNTGC 1 cut(s) 832
BstAUI TGTACA 1 cut(s) 292
BstBAI YACGTR 1 cut(s) 1373
BstBI TTCGAA 1 cut(s) 343
BstC8I GCNNGC 1 cut(s) 328
BstDEI CTNAG 6 cut(s) 233, 632, 711, 782, 977, 1636
BstENI CCTNNNNNAGG 2 cut(s) 448, 714
BstF5I GGATG 4 cut(s) 471, 1051, 1596, 1609
BstFNI CGCG 1 cut(s) 1793
BstHHI GCGC 1 cut(s) 1793
BstKTI GATC 4 cut(s) 111, 1034, 1363, 1447
BstMAI GTCTC 9 cut(s) 119, 340, 353, 576, 714, 720, 1105, 1192, 1678
BstMBI GATC 4 cut(s) 108, 1031, 1360, 1444
BstMWI GCNNNNNNNGC 6 cut(s) 101, 224, 320, 832, 841, 1322
BstNI CCWGG 4 cut(s) 115, 957, 1601, 1788
BstNSI RCATGY 2 cut(s) 762, 1761
BstSCI CCNGG 4 cut(s) 113, 955, 1599, 1786
BstSFI CTRYAG 1 cut(s) 76
BstUI CGCG 1 cut(s) 1793
BstV1I GCAGC 5 cut(s) 262, 389, 627, 1550, 1738
BstV2I GAAGAC 1 cut(s) 698
Bsu36I CCTNAGG 1 cut(s) 711
BsuI GTATCC 2 cut(s) 460, 842
BsuRI GGCC 5 cut(s) 74, 156, 1136, 1595, 1774
BtgZI GCGATG 1 cut(s) 56
BtsCI GGATG 4 cut(s) 471, 1051, 1596, 1609
BtsI GCAGTG 1 cut(s) 1814
BtsIMutI CAGTG 6 cut(s) 170, 217, 640, 974, 1741, 1814
Cac8I GCNNGC 1 cut(s) 328
CciI TCATGA 1 cut(s) 1221
CfoI GCGC 1 cut(s) 1793
Cfr10I RCCGGY 1 cut(s) 1770
Cfr13I GGNCC 2 cut(s) 117, 914
CseI GACGC 3 cut(s) 224, 871, 1700
CsiI ACCWGGT 1 cut(s) 113
Csp6I GTAC 8 cut(s) 230, 293, 532, 906, 1380, 1423, 1631, 1768
CspCI CAANNNNNGTGG 2 cut(s) 1790, 1825
CviAII CATG 9 cut(s) 479, 695, 759, 763, 845, 1222, 1364, 1661, 1758
CviQI GTAC 8 cut(s) 230, 293, 532, 906, 1380, 1423, 1631, 1768
DdeI CTNAG 6 cut(s) 233, 632, 711, 782, 977, 1636
DpnI GATC 4 cut(s) 110, 1033, 1362, 1446
DpnII GATC 4 cut(s) 108, 1031, 1360, 1444
EaeI YGGCCR 2 cut(s) 154, 1593
Eam1104I CTCTTC 3 cut(s) 374, 924, 1676
EarI CTCTTC 3 cut(s) 374, 924, 1676
Eco130I CCWWGG 2 cut(s) 1436, 1775
Eco147I AGGCCT 2 cut(s) 74, 1136
Eco24I GRGCYC 1 cut(s) 633
Eco47I GGWCC 2 cut(s) 117, 914
Eco57I CTGAAG 3 cut(s) 487, 1465, 1661
Eco81I CCTNAGG 1 cut(s) 711
Eco88I CYCGRG 1 cut(s) 626
EcoNI CCTNNNNNAGG 2 cut(s) 448, 714
EcoRII CCWGG 4 cut(s) 113, 955, 1599, 1786
EcoT14I CCWWGG 2 cut(s) 1436, 1775
EcoT22I ATGCAT 2 cut(s) 607, 764
EcoT38I GRGCYC 1 cut(s) 633
ErhI CCWWGG 2 cut(s) 1436, 1775
Esp3I CGTCTC 1 cut(s) 340
FaeI CATG 9 cut(s) 482, 698, 762, 766, 848, 1225, 1367, 1664, 1761
FalI AAGNNNNNCTT 2 cut(s) 690, 722
FaqI GGGAC 1 cut(s) 467
FatI CATG 9 cut(s) 478, 694, 758, 762, 844, 1221, 1363, 1660, 1757
FbaI TGATCA 2 cut(s) 1360, 1444
FblI GTMKAC 1 cut(s) 622
FokI GGATG 4 cut(s) 458, 1038, 1583, 1616
FriOI GRGCYC 1 cut(s) 633
FspBI CTAG 5 cut(s) 272, 542, 587, 1334, 1577
GlaI GCGC 1 cut(s) 1792
GsuI CTGGAG 2 cut(s) 194, 939
HaeIII GGCC 5 cut(s) 74, 156, 1136, 1595, 1774
HapII CCGG 2 cut(s) 1589, 1771
HgaI GACGC 3 cut(s) 224, 871, 1700
HhaI GCGC 1 cut(s) 1793
Hin1II CATG 9 cut(s) 482, 698, 762, 766, 848, 1225, 1367, 1664, 1761
Hin6I GCGC 1 cut(s) 1791
HinP1I GCGC 1 cut(s) 1791
HincII GTYRAC 3 cut(s) 623, 1237, 1609
HindII GTYRAC 3 cut(s) 623, 1237, 1609
HindIII AAGCTT 1 cut(s) 699
HinfI GANTC 5 cut(s) 556, 624, 934, 1213, 1610
HpaII CCGG 2 cut(s) 1589, 1771
HphI GGTGA 6 cut(s) 103, 506, 935, 1070, 1338, 1515
Hpy166II GTNNAC 5 cut(s) 547, 623, 1237, 1609, 1666
Hpy188I TCNGA 9 cut(s) 10, 282, 519, 785, 1015, 1360, 1484, 1615, 1680
Hpy188III TCNNGA 5 cut(s) 560, 1029, 1055, 1222, 1283
Hpy8I GTNNAC 5 cut(s) 547, 623, 1237, 1609, 1666
HpyAV CCTTC 6 cut(s) 350, 485, 887, 1126, 1489, 1685
HpyCH4III ACNGT 5 cut(s) 86, 212, 731, 1379, 1736
HpyCH4IV ACGT 1 cut(s) 1372
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 224, 320, 832, 841, 1322
HpyF3I CTNAG 6 cut(s) 233, 632, 711, 782, 977, 1636
HpySE526I ACGT 1 cut(s) 1372
Hsp92II CATG 9 cut(s) 482, 698, 762, 766, 848, 1225, 1367, 1664, 1761
HspAI GCGC 1 cut(s) 1791
Ksp22I TGATCA 2 cut(s) 1360, 1444
Kzo9I GATC 4 cut(s) 108, 1031, 1360, 1444
LmnI GCTCC 1 cut(s) 959
Lsp1109I GCAGC 5 cut(s) 262, 389, 627, 1550, 1738
LweI GCATC 2 cut(s) 971, 985
MabI ACCWGGT 1 cut(s) 113
MaeI CTAG 5 cut(s) 272, 542, 587, 1334, 1577
MaeII ACGT 1 cut(s) 1372
MaeIII GTNAC 7 cut(s) 212, 389, 981, 1373, 1521, 1552, 1730
MalI GATC 4 cut(s) 110, 1033, 1362, 1446
MboI GATC 4 cut(s) 108, 1031, 1360, 1444
MfeI CAATTG 1 cut(s) 836
MhlI GDGCHC 1 cut(s) 633
MlsI TGGCCA 2 cut(s) 156, 1595
MluNI TGGCCA 2 cut(s) 156, 1595
MlyI GAGTC 2 cut(s) 618, 1604
MmeI TCCRAC 1 cut(s) 1698
Mox20I TGGCCA 2 cut(s) 156, 1595
Mph1103I ATGCAT 2 cut(s) 607, 764
MroXI GAANNNNTTC 2 cut(s) 770, 1024
MscI TGGCCA 2 cut(s) 156, 1595
MseI TTAA 6 cut(s) 384, 414, 525, 803, 1532, 1850
Msp20I TGGCCA 2 cut(s) 156, 1595
MspA1I CMGCKG 1 cut(s) 618
MspI CCGG 2 cut(s) 1589, 1771
MspR9I CCNGG 4 cut(s) 115, 957, 1601, 1788
MunI CAATTG 1 cut(s) 836
Mva1269I GAATGC 1 cut(s) 605
MvaI CCWGG 4 cut(s) 115, 957, 1601, 1788
MvnI CGCG 1 cut(s) 1793
MwoI GCNNNNNNNGC 6 cut(s) 101, 224, 320, 832, 841, 1322
NdeII GATC 4 cut(s) 108, 1031, 1360, 1444
NlaIII CATG 9 cut(s) 482, 698, 762, 766, 848, 1225, 1367, 1664, 1761
NmuCI GTSAC 3 cut(s) 212, 981, 1521
NsiI ATGCAT 2 cut(s) 607, 764
NspI RCATGY 2 cut(s) 762, 1761
NspV TTCGAA 1 cut(s) 343
PagI TCATGA 1 cut(s) 1221
PceI AGGCCT 2 cut(s) 74, 1136
PciI ACATGT 1 cut(s) 1757
PctI GAATGC 1 cut(s) 605
PdmI GAANNNNTTC 2 cut(s) 770, 1024
PfeI GAWTC 3 cut(s) 556, 934, 1213
PfoI TCCNGGA 2 cut(s) 955, 1599
PleI GAGTC 2 cut(s) 618, 1604
PpsI GAGTC 2 cut(s) 618, 1604
Ppu21I YACGTR 1 cut(s) 1373
PscI ACATGT 1 cut(s) 1757
PshBI ATTAAT 1 cut(s) 1532
PsiI TTATAA 1 cut(s) 1431
Psp6I CCWGG 4 cut(s) 113, 955, 1599, 1786
PspGI CCWGG 4 cut(s) 113, 955, 1599, 1786
PspPI GGNCC 2 cut(s) 117, 914
PvuII CAGCTG 1 cut(s) 618
RsaI GTAC 8 cut(s) 231, 294, 533, 907, 1381, 1424, 1632, 1769
RsaNI GTAC 8 cut(s) 230, 293, 532, 906, 1380, 1423, 1631, 1768
SalI GTCGAC 1 cut(s) 621
SaqAI TTAA 6 cut(s) 384, 414, 525, 803, 1532, 1850
Sau3AI GATC 4 cut(s) 108, 1031, 1360, 1444
Sau96I GGNCC 2 cut(s) 117, 914
SchI GAGTC 2 cut(s) 618, 1604
ScrFI CCNGG 4 cut(s) 115, 957, 1601, 1788
SduI GDGCHC 1 cut(s) 633
SexAI ACCWGGT 1 cut(s) 113
SfaNI GCATC 2 cut(s) 971, 985
SfcI CTRYAG 1 cut(s) 76
SfuI TTCGAA 1 cut(s) 343
SinI GGWCC 2 cut(s) 117, 914
SmlI CTYRAG 2 cut(s) 1281, 1414
SmoI CTYRAG 2 cut(s) 1281, 1414
SpeI ACTAGT 1 cut(s) 541
SseBI AGGCCT 2 cut(s) 74, 1136
SsiI CCGC 6 cut(s) 227, 263, 323, 483, 1367, 1793
SspMI CTAG 5 cut(s) 272, 542, 587, 1334, 1577
StuI AGGCCT 2 cut(s) 74, 1136
StyD4I CCNGG 4 cut(s) 113, 955, 1599, 1786
StyI CCWWGG 2 cut(s) 1436, 1775
TaaI ACNGT 5 cut(s) 86, 212, 731, 1379, 1736
TaiI ACGT 1 cut(s) 1375
TaqI TCGA 3 cut(s) 343, 622, 1261
TatI WGTACW 4 cut(s) 292, 1379, 1422, 1630
TauI GCSGC 5 cut(s) 265, 326, 485, 1370, 1796
TfiI GAWTC 3 cut(s) 556, 934, 1213
Tru1I TTAA 6 cut(s) 384, 414, 525, 803, 1532, 1850
Tru9I TTAA 6 cut(s) 384, 414, 525, 803, 1532, 1850
TscAI CASTG 6 cut(s) 177, 217, 640, 981, 1741, 1814
TseFI GTSAC 3 cut(s) 212, 981, 1521
TseI GCWGC 5 cut(s) 275, 377, 615, 1538, 1751
Tsp45I GTSAC 3 cut(s) 212, 981, 1521
TspRI CASTG 6 cut(s) 177, 217, 640, 981, 1741, 1814
VpaK11BI GGWCC 2 cut(s) 117, 914
VspI ATTAAT 1 cut(s) 1532
XagI CCTNNNNNAGG 2 cut(s) 448, 714
XapI RAATTY 1 cut(s) 1583
XceI RCATGY 2 cut(s) 762, 1761
XmiI GTMKAC 1 cut(s) 622
XmnI GAANNNNTTC 2 cut(s) 770, 1024
XspI CTAG 5 cut(s) 272, 542, 587, 1334, 1577
Zsp2I ATGCAT 2 cut(s) 607, 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.