RLG00000008218

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0001790
Physical Location & Seq
Reverse (-)
27308219 .. 27312213
3995 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008218

Sequence Viewer

Length: 1917 bp
ATGGCTTCAGATGACGAAATAGACAGCTTGTTAGAAAACGCGATGAAAGGACAATGGGAAAAGGTCATGGAGGCCTACAGAAATAGTATTACAGGATTTACAGCTCAAGTAGCCAAGATAACCAGATCCAAGGAGACTGCTCTGCACATAGCTATAGCAGATGGCCGAACCGAAATCGTCCTAGAGTTGGTGAACATTATTCTCAATACTGAAGAAGACAGTGCATCAACCGCAGTACTCAGCATAGCAAATGATAGAGGCAACACGCCTCTACATCTAGCTGCTTGGCTCGGGAATGTACAAGTGTGCCACAGCATTGCCGCCAGGGCGGCGAGCCTCGTCTCCGTTCGAAATGTGGAGGGAGAGACACCTCTCTTCTTGGCAGCCCTTAATGGTAACACAAAGGCTTTTCTTTGCCTCAATTTCCATTGCCAAGAAAAACACTATTCCTCGATCAGAGACAACAATGGTGATACCATTCTTCATGCTGCAATCTCCGGTGAATACTTCAGTTTAGCATTTCAGATAATTTGGATGTACCCAGAACTTGTGAACTCTATCAATCAAAATGGTTCGTCTCCGCTGCATATTCTAGCCAGTAAGCCCAATGCATTCAAAAGCAGCTGTCGACTTGAACTCTGTGATCATCTTATATACAAATGTTTGATGGTTGAAGAACTCAAAGTGGAAGAATATAACCATGAAGCTTGTCTTTCTAAGGCAGGAGACAGAAATAGTTCTTCATACCCAGAAAACTATGAAACATGCATGAATTTCTTCCAAGTTCTCAGAAGTCTGTTTCCAGTGTTAAGTAAAAAGAGGGGAGATAGGAATTGGATGCAAGTGCGGCACGTATACTGGCATAAGACGCACAGCTCACTCCTTCAAGATAATGGAGAAAATGCGAAGGGTACAAATGGTCCTGTTGATGATGAAGAGAATCCCAAACAAGAGGCTACTCCAGGAGCATCAACTTCTGCAGTGAGGTCACAATTAATAGATGTTACAAACGAAATATCACATGCAAAGAGTTCAAGATCAACCAATGGGGCAAATCATCCAGAGGGAAAGGGGAGAAAGAATCACCTGTTTCCTCCCAATTATGTCTCATTTGTTCTGTTCTTCAAGTTTCTGATGAAGGCCTTGCTAATCATTCTGGGATTTGGAATTTGGGGGATAAGAAAAATCCAAGAAAAGAAAGAGAGACATATATGGGCAAATCAGGTCATGAATGAATTGGTTGACCGTACTTCTTTATACAAATATCGAAATACTGGGCAAAATCCCCAAGAAACTCAACCCAGCAAACATAAAGAAGAATATGAAGTGCCTAATCCTACAATGCCAGAGCAAGCTTCACCCTTGCCATCTGATCATGTGGCACTTAACAGTAGAGCTACAAGTACTGAGACGACTATCTTGTCCTCAAACCAGTACAATTACAAGATAGAGAGTGATCAGAAAGAACAAGAGAGGAAGAACAATAATCCCTTGGGAGGTAAGAAGAATGTAGTTCCTGGAAAGAATCAGTCACCTGTTTTAATTGCAGCAAAGATGGGAGTAACTGAAATGGTGGAGAAAATCCTAGACAAATTTCCAGTGGCCATCCAGGATGTTGACTCTGATAACAAGAATGTTATACTCTTAGCAGTTGAGAACAGGCAACCCCATGTGTACAATATCCTTCAGAAGAGAAAGATACTAAAAGAAAGCCTGTTTCGTCAGTTGGACAACGAAGGTAATAGTGCATTACATCTTGCTGCTACATGTGGACAGTACCGGCCTTGGCTTATTCCAGGCGCGGCATTGCAAATGCAATGGGAAATCAAGTGGTATAAGTTGCCGCTCTACTTTGATCTCATGAAGGCCATCATCAGAAAGGTACCTCAACGGAGCTACGAGGTGTATCCACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

639

Amino Acids

72.09

Weight (kDa)

7.64

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 43 - 107 1.8e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1420
Acc65I GGTACC 1 cut(s) 1882
AccB1I GGYRCC 1 cut(s) 1882
AccBSI CCGCTC 1 cut(s) 1846
AccI GTMKAC 2 cut(s) 628, 855
AccII CGCG 2 cut(s) 41, 1802
AciI CCGC 7 cut(s) 231, 321, 329, 581, 847, 1802, 1844
AclWI GGATC 1 cut(s) 120
AcoI YGGCCR 2 cut(s) 163, 1602
AcsI RAATTY 3 cut(s) 772, 1167, 1592
AcuI CTGAAG 3 cut(s) 231, 493, 1670
AfiI CCNNNNNNNGG 2 cut(s) 187, 1496
AflIII ACRYGT 1 cut(s) 1766
AgsI TTSAA 6 cut(s) 616, 635, 674, 887, 1035, 1126
AjnI CCWGG 5 cut(s) 323, 961, 1516, 1608, 1795
Alw26I GTCTC 9 cut(s) 128, 346, 359, 453, 582, 720, 1111, 1198, 1403
AlwI GGATC 1 cut(s) 120
Ama87I CYCGRG 1 cut(s) 290
AoxI GGCC 6 cut(s) 72, 163, 1140, 1602, 1781, 1866
ApeKI GCWGC 7 cut(s) 281, 383, 488, 583, 621, 1547, 1760
ApoI RAATTY 3 cut(s) 772, 1167, 1592
AseI ATTAAT 1 cut(s) 995
Asp700I GAANNNNTTC 2 cut(s) 736, 776
Asp718I GGTACC 1 cut(s) 1882
AspLEI GCGC 1 cut(s) 1802
AspS9I GGNCC 1 cut(s) 920
AsuHPI GGTGA 6 cut(s) 202, 482, 512, 1076, 1350, 1524
AsuII TTCGAA 1 cut(s) 349
AvaI CYCGRG 1 cut(s) 290
AvaII GGWCC 1 cut(s) 920
BalI TGGCCA 1 cut(s) 1604
BanI GGYRCC 1 cut(s) 1882
BbsI GAAGAC 1 cut(s) 222
BbvI GCAGC 7 cut(s) 268, 395, 475, 570, 633, 1559, 1747
BccI CCATC 6 cut(s) 155, 661, 1375, 1549, 1613, 1877
BciT130I CCWGG 5 cut(s) 325, 963, 1518, 1610, 1797
BciVI GTATCC 1 cut(s) 1917
BclI TGATCA 3 cut(s) 643, 1372, 1456
BcoDI GTCTC 9 cut(s) 128, 346, 359, 453, 582, 720, 1111, 1198, 1403
BfaI CTAG 4 cut(s) 182, 278, 593, 1586
BfmI CTRYAG 3 cut(s) 76, 153, 978
BfuI GTATCC 1 cut(s) 1917
BglI GCCNNNNNGGC 2 cut(s) 326, 329
BmcAI AGTACT 2 cut(s) 237, 1405
Bme1390I CCNGG 5 cut(s) 325, 963, 1518, 1610, 1797
Bme18I GGWCC 1 cut(s) 920
BmeT110I CYCGRG 1 cut(s) 290
BmgT120I GGNCC 1 cut(s) 920
BmiI GGNNCC 1 cut(s) 1884
BmrFI CCNGG 5 cut(s) 325, 963, 1518, 1610, 1797
BmrI ACTGGG 1 cut(s) 1284
BmsI GCATC 3 cut(s) 233, 828, 977
BmuI ACTGGG 1 cut(s) 1284
BpiI GAAGAC 1 cut(s) 222
BpmI CTGGAG 1 cut(s) 945
Bpu14I TTCGAA 1 cut(s) 349
BpuEI CTTGAG 1 cut(s) 90
BsaAI YACGTR 1 cut(s) 853
BsaJI CCNNGG 4 cut(s) 129, 324, 1491, 1784
BsaWI WCCGGW 1 cut(s) 497
Bsc4I CCNNNNNNNGG 2 cut(s) 187, 1496
Bse118I RCCGGY 1 cut(s) 1779
Bse1I ACTGG 6 cut(s) 597, 803, 863, 1279, 1432, 1598
Bse3DI GCAATG 4 cut(s) 315, 427, 1805, 1823
BseBI CCWGG 5 cut(s) 325, 963, 1518, 1610, 1797
BseDI CCNNGG 4 cut(s) 129, 324, 1491, 1784
BseGI GGATG 5 cut(s) 540, 843, 1057, 1605, 1618
BseLI CCNNNNNNNGG 2 cut(s) 187, 1496
BseMI GCAATG 4 cut(s) 315, 427, 1805, 1823
BseMII CTCAG 3 cut(s) 253, 802, 1398
BseNI ACTGG 6 cut(s) 597, 803, 863, 1279, 1432, 1598
BseXI GCAGC 7 cut(s) 268, 395, 475, 570, 633, 1559, 1747
BseYI CCCAGC 1 cut(s) 1301
BsgI GTGCAG 1 cut(s) 128
Bsh1236I CGCG 2 cut(s) 41, 1802
BshFI GGCC 6 cut(s) 74, 165, 1142, 1604, 1783, 1868
BshNI GGYRCC 1 cut(s) 1882
BsiHKCI CYCGRG 1 cut(s) 290
BsiSI CCGG 2 cut(s) 498, 1780
BslI CCNNNNNNNGG 2 cut(s) 187, 1496
BsmAI GTCTC 9 cut(s) 128, 346, 359, 453, 582, 720, 1111, 1198, 1403
BsmBI CGTCTC 3 cut(s) 346, 582, 1403
BsmI GAATGC 1 cut(s) 611
BsnI GGCC 6 cut(s) 74, 165, 1142, 1604, 1783, 1868
BsoBI CYCGRG 1 cut(s) 290
Bsp119I TTCGAA 1 cut(s) 349
Bsp1407I TGTACA 2 cut(s) 298, 1674
Bsp143I GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
BspACI CCGC 7 cut(s) 231, 321, 329, 581, 847, 1802, 1844
BspANI GGCC 6 cut(s) 74, 165, 1142, 1604, 1783, 1868
BspCNI CTCAG 3 cut(s) 252, 801, 1399
BspFNI CGCG 2 cut(s) 41, 1802
BspHI TCATGA 2 cut(s) 1227, 1860
BspLI GGNNCC 1 cut(s) 1884
BspMAI CTGCAG 1 cut(s) 982
BspPI GGATC 1 cut(s) 120
BspT104I TTCGAA 1 cut(s) 349
BspT107I GGYRCC 1 cut(s) 1882
BsrBI CCGCTC 1 cut(s) 1846
BsrDI GCAATG 4 cut(s) 315, 427, 1805, 1823
BsrFI RCCGGY 1 cut(s) 1779
BsrGI TGTACA 2 cut(s) 298, 1674
BsrI ACTGG 6 cut(s) 597, 803, 863, 1279, 1432, 1598
BssAI RCCGGY 1 cut(s) 1779
BssECI CCNNGG 4 cut(s) 129, 324, 1491, 1784
BssMI GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
BssNAI GTATAC 1 cut(s) 856
BssT1I CCWWGG 3 cut(s) 129, 1491, 1784
Bst1107I GTATAC 1 cut(s) 856
Bst2UI CCWGG 5 cut(s) 325, 963, 1518, 1610, 1797
Bst4CI ACNGT 4 cut(s) 221, 1247, 1391, 1776
Bst6I CTCTTC 3 cut(s) 380, 930, 1685
BstAUI TGTACA 2 cut(s) 298, 1674
BstBAI YACGTR 1 cut(s) 853
BstBI TTCGAA 1 cut(s) 349
BstC8I GCNNGC 2 cut(s) 334, 1353
BstDEI CTNAG 5 cut(s) 239, 717, 788, 1407, 1645
BstF5I GGATG 5 cut(s) 540, 843, 1057, 1605, 1618
BstFNI CGCG 2 cut(s) 41, 1802
BstHHI GCGC 1 cut(s) 1802
BstKTI GATC 7 cut(s) 128, 456, 646, 1040, 1375, 1459, 1858
BstMAI GTCTC 9 cut(s) 128, 346, 359, 453, 582, 720, 1111, 1198, 1403
BstMBI GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
BstMWI GCNNNNNNNGC 6 cut(s) 110, 230, 326, 329, 847, 868
BstNI CCWGG 5 cut(s) 325, 963, 1518, 1610, 1797
BstNSI RCATGY 3 cut(s) 768, 1025, 1770
BstSCI CCNGG 5 cut(s) 323, 961, 1516, 1608, 1795
BstSFI CTRYAG 3 cut(s) 76, 153, 978
BstUI CGCG 2 cut(s) 41, 1802
BstV1I GCAGC 7 cut(s) 268, 395, 475, 570, 633, 1559, 1747
BstV2I GAAGAC 1 cut(s) 222
BstX2I RGATCY 1 cut(s) 125
BstYI RGATCY 1 cut(s) 125
BstZ17I GTATAC 1 cut(s) 856
BsuI GTATCC 1 cut(s) 1917
BsuRI GGCC 6 cut(s) 74, 165, 1142, 1604, 1783, 1868
BtgZI GCGATG 1 cut(s) 56
BtsCI GGATG 5 cut(s) 540, 843, 1057, 1605, 1618
BtsI GCAGTG 1 cut(s) 987
BtsIMutI CAGTG 4 cut(s) 226, 810, 987, 1605
Cac8I GCNNGC 2 cut(s) 334, 1353
CciI TCATGA 2 cut(s) 1227, 1860
CfoI GCGC 1 cut(s) 1802
Cfr10I RCCGGY 1 cut(s) 1779
Cfr13I GGNCC 1 cut(s) 920
CseI GACGC 1 cut(s) 877
DdeI CTNAG 5 cut(s) 239, 717, 788, 1407, 1645
DpnI GATC 7 cut(s) 127, 455, 645, 1039, 1374, 1458, 1857
DpnII GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
DrdI GACNNNNNNGTC 1 cut(s) 1420
DseDI GACNNNNNNGTC 1 cut(s) 1420
EaeI YGGCCR 2 cut(s) 163, 1602
Eam1104I CTCTTC 3 cut(s) 380, 930, 1685
EarI CTCTTC 3 cut(s) 380, 930, 1685
Eco130I CCWWGG 3 cut(s) 129, 1491, 1784
Eco147I AGGCCT 2 cut(s) 74, 1142
Eco47I GGWCC 1 cut(s) 920
Eco57I CTGAAG 3 cut(s) 231, 493, 1670
Eco88I CYCGRG 1 cut(s) 290
EcoRII CCWGG 5 cut(s) 323, 961, 1516, 1608, 1795
EcoT14I CCWWGG 3 cut(s) 129, 1491, 1784
EcoT22I ATGCAT 2 cut(s) 613, 770
ErhI CCWWGG 3 cut(s) 129, 1491, 1784
Esp3I CGTCTC 3 cut(s) 346, 582, 1403
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FbaI TGATCA 3 cut(s) 643, 1372, 1456
FblI GTMKAC 2 cut(s) 628, 855
FokI GGATG 5 cut(s) 547, 850, 1044, 1592, 1625
FspBI CTAG 4 cut(s) 182, 278, 593, 1586
GlaI GCGC 1 cut(s) 1801
GsaI CCCAGC 1 cut(s) 1305
GsuI CTGGAG 1 cut(s) 945
HaeIII GGCC 6 cut(s) 74, 165, 1142, 1604, 1783, 1868
HapII CCGG 2 cut(s) 498, 1780
HgaI GACGC 1 cut(s) 877
HhaI GCGC 1 cut(s) 1802
Hin6I GCGC 1 cut(s) 1800
HinP1I GCGC 1 cut(s) 1800
HincII GTYRAC 3 cut(s) 629, 1243, 1618
HindII GTYRAC 3 cut(s) 629, 1243, 1618
HindIII AAGCTT 2 cut(s) 705, 1353
HinfI GANTC 4 cut(s) 940, 1081, 1525, 1619
HpaII CCGG 2 cut(s) 498, 1780
HphI GGTGA 6 cut(s) 202, 482, 512, 1076, 1350, 1524
Hpy166II GTNNAC 8 cut(s) 193, 553, 629, 856, 1243, 1618, 1675, 1772
Hpy188III TCNNGA 6 cut(s) 292, 887, 1035, 1061, 1228, 1861
Hpy8I GTNNAC 8 cut(s) 193, 553, 629, 856, 1243, 1618, 1675, 1772
HpyAV CCTTC 6 cut(s) 893, 901, 1132, 1694, 1730, 1858
HpyCH4III ACNGT 4 cut(s) 221, 1247, 1391, 1776
HpyCH4IV ACGT 1 cut(s) 852
HpyF10VI GCNNNNNNNGC 6 cut(s) 110, 230, 326, 329, 847, 868
HpyF3I CTNAG 5 cut(s) 239, 717, 788, 1407, 1645
HpySE526I ACGT 1 cut(s) 852
HspAI GCGC 1 cut(s) 1800
KpnI GGTACC 1 cut(s) 1886
Ksp22I TGATCA 3 cut(s) 643, 1372, 1456
Kzo9I GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
LmnI GCTCC 2 cut(s) 965, 1893
Lsp1109I GCAGC 7 cut(s) 268, 395, 475, 570, 633, 1559, 1747
LweI GCATC 3 cut(s) 233, 828, 977
MaeI CTAG 4 cut(s) 182, 278, 593, 1586
MaeII ACGT 1 cut(s) 852
MaeIII GTNAC 5 cut(s) 395, 987, 1003, 1530, 1561
MalI GATC 7 cut(s) 127, 455, 645, 1039, 1374, 1458, 1857
MbiI CCGCTC 1 cut(s) 1846
MboI GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
MflI RGATCY 1 cut(s) 125
MlsI TGGCCA 1 cut(s) 1604
MluNI TGGCCA 1 cut(s) 1604
MlyI GAGTC 1 cut(s) 1613
MmeI TCCRAC 1 cut(s) 1707
Mox20I TGGCCA 1 cut(s) 1604
Mph1103I ATGCAT 2 cut(s) 613, 770
MroXI GAANNNNTTC 2 cut(s) 736, 776
MscI TGGCCA 1 cut(s) 1604
MseI TTAA 5 cut(s) 390, 809, 995, 1386, 1541
Msp20I TGGCCA 1 cut(s) 1604
MspA1I CMGCKG 2 cut(s) 583, 624
MspI CCGG 2 cut(s) 498, 1780
MspR9I CCNGG 5 cut(s) 325, 963, 1518, 1610, 1797
Mva1269I GAATGC 1 cut(s) 611
MvaI CCWGG 5 cut(s) 325, 963, 1518, 1610, 1797
MvnI CGCG 2 cut(s) 41, 1802
MwoI GCNNNNNNNGC 6 cut(s) 110, 230, 326, 329, 847, 868
NdeII GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
NlaIV GGNNCC 1 cut(s) 1884
NmuCI GTSAC 2 cut(s) 987, 1530
NsiI ATGCAT 2 cut(s) 613, 770
NspI RCATGY 3 cut(s) 768, 1025, 1770
NspV TTCGAA 1 cut(s) 349
PagI TCATGA 2 cut(s) 1227, 1860
PceI AGGCCT 2 cut(s) 74, 1142
PciI ACATGT 1 cut(s) 1766
PctI GAATGC 1 cut(s) 611
PdmI GAANNNNTTC 2 cut(s) 736, 776
PfeI GAWTC 3 cut(s) 940, 1081, 1525
PfoI TCCNGGA 3 cut(s) 961, 1516, 1608
PleI GAGTC 1 cut(s) 1613
PpsI GAGTC 1 cut(s) 1613
Ppu21I YACGTR 1 cut(s) 853
PscI ACATGT 1 cut(s) 1766
PshBI ATTAAT 1 cut(s) 995
Psp6I CCWGG 5 cut(s) 323, 961, 1516, 1608, 1795
PspFI CCCAGC 1 cut(s) 1301
PspGI CCWGG 5 cut(s) 323, 961, 1516, 1608, 1795
PspN4I GGNNCC 1 cut(s) 1884
PspPI GGNCC 1 cut(s) 920
PstI CTGCAG 1 cut(s) 982
PsuI RGATCY 1 cut(s) 125
PvuII CAGCTG 1 cut(s) 624
SalI GTCGAC 1 cut(s) 627
SaqAI TTAA 5 cut(s) 390, 809, 995, 1386, 1541
Sau3AI GATC 7 cut(s) 125, 453, 643, 1037, 1372, 1456, 1855
Sau96I GGNCC 1 cut(s) 920
ScaI AGTACT 2 cut(s) 237, 1405
SchI GAGTC 1 cut(s) 1613
ScrFI CCNGG 5 cut(s) 325, 963, 1518, 1610, 1797
SfaNI GCATC 3 cut(s) 233, 828, 977
SfcI CTRYAG 3 cut(s) 76, 153, 978
SfuI TTCGAA 1 cut(s) 349
SinI GGWCC 1 cut(s) 920
SmlI CTYRAG 1 cut(s) 105
SmoI CTYRAG 1 cut(s) 105
SseBI AGGCCT 2 cut(s) 74, 1142
SsiI CCGC 7 cut(s) 231, 321, 329, 581, 847, 1802, 1844
SspMI CTAG 4 cut(s) 182, 278, 593, 1586
StuI AGGCCT 2 cut(s) 74, 1142
StyD4I CCNGG 5 cut(s) 323, 961, 1516, 1608, 1795
StyI CCWWGG 3 cut(s) 129, 1491, 1784
TaaI ACNGT 4 cut(s) 221, 1247, 1391, 1776
TaiI ACGT 1 cut(s) 855
TaqI TCGA 4 cut(s) 349, 452, 628, 1267
TatI WGTACW 5 cut(s) 235, 298, 1403, 1434, 1674
TauI GCSGC 5 cut(s) 323, 332, 850, 1805, 1846
TfiI GAWTC 3 cut(s) 940, 1081, 1525
Tru1I TTAA 5 cut(s) 390, 809, 995, 1386, 1541
Tru9I TTAA 5 cut(s) 390, 809, 995, 1386, 1541
TscAI CASTG 4 cut(s) 226, 810, 987, 1605
TseFI GTSAC 2 cut(s) 987, 1530
TseI GCWGC 7 cut(s) 281, 383, 488, 583, 621, 1547, 1760
Tsp45I GTSAC 2 cut(s) 987, 1530
TspGWI ACGGA 2 cut(s) 334, 1906
TspRI CASTG 4 cut(s) 226, 810, 987, 1605
VpaK11BI GGWCC 1 cut(s) 920
VspI ATTAAT 1 cut(s) 995
XapI RAATTY 3 cut(s) 772, 1167, 1592
XceI RCATGY 3 cut(s) 768, 1025, 1770
XmiI GTMKAC 2 cut(s) 628, 855
XmnI GAANNNNTTC 2 cut(s) 736, 776
XspI CTAG 4 cut(s) 182, 278, 593, 1586
ZrmI AGTACT 2 cut(s) 237, 1405
Zsp2I ATGCAT 2 cut(s) 613, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.