RchiOBHm_Chr4g0414131

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0001790
Physical Location & Seq
Reverse (-)
38517286 .. 38521629
4344 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38457

Sequence Viewer

Length: 2493 bp
ATGGCTTCAGATGAGGAAATAGATAGCTTGTTCGAATACGCAATGAAAGGACAATGGGAAAAGGTCATGGAGGCCTACAAAAAAAGTATTACTGCTCAAGTAGCCAAGATAACCAGATCCAAGGAGACTGCTCTGCACATAGCTATAGCAGATGACCGAACCGAAATCGCACTAGACTTGGTGAGCATTATTCTCAGTAAAGGAGATGACAATGCAACAACCGCAATACTCAGCTTAGCAAATGATAGAGGCAACACGCCTCTACATCTAGCTGCTTGGCTCGGGAATGTACGAGTGTGCCACAGCATTGCGGCCAAGGCGGGGAGCCTCGTCTCCGTTCGAAATGTGGAGGGTGAGACACCTCTCTTCTTGGCAGCTCTTAATGGTAACACAAAGGCTTTTCTTTGCCTTCATCTCCATTGCCAAGAAAAACCCCATTCCTCTATCAGAGACAACAATGGTGATACCATCCTTCACGCTGCAATCTCCGGTGAATACTTCAGTTTGGCATTTCAGATAATTCGGTTGTACCCGGAACTTGTGAACTCTATCAATCAAAATGGTTCGTCTCCGCTGCATATTCTAGCTAGTAAGCCCAATGCATTCAAAAGCAGCTGTCGACTTGGACTCTGTGATCTTCTTATATACAAATGTTTGATGGTTGAAGAACTCGAAGTGGAAGCATATAACCATGAAGCGTGTCTTTCTAAGGCAGGAGACGGAGACAGTTCTTCATACCCAGAAAACTACGAAACATGCATGAACTTCTTCCAAGTTTTCAGAAGTTTGTTTCAAGTGTTAAGTAAAAAGAGGGGAGATAAGAACTGTATGCAAGTGTGGCACGAATACTGGCATAAGAAGCACAGCTCCCTCTTTCAAGCTAATGGAGGAAATGGAAAGGGTACTAATGGTCCTGCCGACGACGAAGAGAATCCGCAAAAAGGCTACTCCAGGAGCATCAACTTCCGCAAGAGATGCTACAAAAGAAATATCAAATGCAAAGAGTTCAAGATCAACCAACGCATCTTAACTATGCTGAGATATCATGACTTTGAGCGTCCGTTTTTCTTTTTCTTATCAGAGGCAAACCATCCAGAGGGAAAGGGGAGAGAAAATCACCTGTTTCCTCCCAATTATGTCTCATTTGTTCTGTTCTTCAAGTTTATGATGAAGGCCTTGCTAATCATTCTGGGAATTGGAATTTGGGGGATAAGAAAAATCCAAGAAAAGAAAAAGAGACATATATGGGCAAATCAGGTCATGAATGAATTGGTTGACCGTACTTCTTTATACAAATATCGAAATACTGGGAAAAATCCCCAAGAAACTCAACCCAGCTGCAAAGATAAAGAAGAATGTGAAGTGCCTAATCCTACAATGCTACAGCAAGCTTCACCCTTATCATCTGATCATGCGGCACTTAAAAGTAGAGATACAAGTATTGAGACGACTATCTTGTCCTCAAACCAGAACAATTATACGATAGGGAGTGATCAGAATGAACAAGAGAGAAAGAACAATAATGCCTTGGGAGGTAAGAAGAATGGAGTTCTTGTAGCAGGGAAAAATCAGTCACCTGTTTTAATTGCAGCAAAGATGGGAGTAACTGAAATGGTGGAGAAAATCCTAGACAAATTTCCAGTGGCCATCCAGGATGTTGACTCTGATAACAAGAATGTTATACTCTTAGCAGTTGAGAACAGGCAACCCCATGTTTACAATCTTCTTCAGAAGAGAAAGATACTAAAAGAAAGCCTGTTGCGTCAGTTGGACAACGAAGGTAACAGTGCCTTACATCTTGCTGCTACATGTGGACGGTACCGACCTTGGCTTATTCCAGGCGCGGCATTGCAAATGCAATGGGAAATCAAGTGGTATAAGTTTGTCAAAAACTCCATGCCGCATCGTTACTTTGTTCGCTACAACAAAAGAGGCCAGACACCAAAGGAAATATTCATAGATACACACAAACATCTTATAAAAGAAGGAAGCAAATGGCTAACCAAAACCTCGGAATCATGCTCTGTGGTTGCAGCCCTCATTGCAACGGTTGCATTTGCTACTTCAGCAACTGTACCAGGAGGACTGAATCAGCATACAGGCGAGCCAATTCTCAAAGACAAGACAGCATTCAGTGCCTTCACCATTTCATCACTAGTTGCTCTCTGCTTCTCAATAACTTCCCTGGTCTTCTTTCTTTCAATCCTCACTTCTCGATACGAAGAAAGTGATTTTTCCATGGACTTGCCCCGAAAACTCTTAATGGGATTGACATCACTGTTTGCATCCATAGCTTCCATGTTAGTCTCGTTCTGCACAGGGCATATCTTTCTCCTAAATCATCAACTGAGATATGTGGCATATCCATTGTATGCAGCAACTTGCTTGCCAGTTACGTTTTTCGCTCTTGCACAGCTGCCACTCTACTTTGATCTCATGAGGGCCATCATCAAAAAGGTACCTCAACGGAGCTACGAGGTCTATCCACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

830

Amino Acids

93.77

Weight (kDa)

9.03

Isoelectric Point (pI)

37.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 39 - 104 6.7e-06 Ankyrin repeats (3 copies)
PGG PF13962 665 - 776 2.8e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1979
AasI GACNNNNNNGTC 1 cut(s) 1456
Acc65I GGTACC 2 cut(s) 1818, 2458
AccB1I GGYRCC 2 cut(s) 1818, 2458
AccI GTMKAC 1 cut(s) 619
AccII CGCG 1 cut(s) 1844
AciI CCGC 9 cut(s) 222, 311, 320, 572, 935, 967, 1415, 1844, 1901
AclWI GGATC 1 cut(s) 111
AcoI YGGCCR 2 cut(s) 312, 1644
AcsI RAATTY 2 cut(s) 1200, 1634
AcuI CTGAAG 3 cut(s) 484, 1712, 2049
AfaI GTAC 7 cut(s) 291, 530, 904, 1282, 1820, 2076, 2460
AfiI CCNNNNNNNGG 3 cut(s) 321, 941, 1096
AflIII ACRYGT 1 cut(s) 1808
AgsI TTSAA 7 cut(s) 607, 665, 794, 878, 1009, 1159, 2202
AhlI ACTAGT 1 cut(s) 2155
AjnI CCWGG 5 cut(s) 950, 1650, 1837, 2077, 2184
AjuI GAANNNNNNNTTGG 2 cut(s) 1186, 1218
AlwI GGATC 1 cut(s) 111
AlwNI CAGNNNCTG 1 cut(s) 2072
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 6 cut(s) 72, 312, 1173, 1644, 1933, 2442
ApoI RAATTY 2 cut(s) 1200, 1634
Asp700I GAANNNNTTC 1 cut(s) 767
Asp718I GGTACC 2 cut(s) 1818, 2458
AspLEI GCGC 1 cut(s) 1844
AspS9I GGNCC 2 cut(s) 911, 2442
AsuC2I CCSGG 1 cut(s) 533
AsuHPI GGTGA 8 cut(s) 193, 365, 473, 503, 1109, 1386, 1566, 2134
AsuII TTCGAA 2 cut(s) 33, 340
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 1 cut(s) 911
BalI TGGCCA 1 cut(s) 1646
BanI GGYRCC 2 cut(s) 1818, 2458
BbsI GAAGAC 1 cut(s) 2182
BccI CCATC 6 cut(s) 476, 652, 1098, 1591, 1655, 2453
BciT130I CCWGG 5 cut(s) 952, 1652, 1839, 2079, 2186
BclI TGATCA 2 cut(s) 1408, 1492
BcnI CCSGG 1 cut(s) 533
BcuI ACTAGT 1 cut(s) 2155
BfaI CTAG 7 cut(s) 173, 269, 584, 588, 1628, 2156, 2491
BfmI CTRYAG 2 cut(s) 144, 1382
BlpI GCTNAGC 1 cut(s) 235
Bme1390I CCNGG 6 cut(s) 533, 952, 1652, 1839, 2079, 2186
Bme18I GGWCC 1 cut(s) 911
BmeT110I CYCGRG 1 cut(s) 281
BmgT120I GGNCC 2 cut(s) 911, 2442
BmiI GGNNCC 3 cut(s) 326, 1820, 2460
BmrFI CCNGG 6 cut(s) 533, 952, 1652, 1839, 2079, 2186
BmrI ACTGGG 1 cut(s) 1317
BmsI GCATC 5 cut(s) 965, 966, 1032, 1912, 2294
BmuI ACTGGG 1 cut(s) 1317
BpiI GAAGAC 1 cut(s) 2182
BpmI CTGGAG 1 cut(s) 934
Bpu1102I GCTNAGC 1 cut(s) 235
Bpu14I TTCGAA 2 cut(s) 33, 340
BpuEI CTTGAG 1 cut(s) 81
BpuMI CCSGG 1 cut(s) 533
BsaBI GATNNNNATC 1 cut(s) 2272
BsaJI CCNNGG 7 cut(s) 120, 315, 1527, 1826, 2010, 2184, 2238
BsaWI WCCGGW 1 cut(s) 488
BsaXI ACNNNNNCTCC 2 cut(s) 1539, 1569
Bsc4I CCNNNNNNNGG 3 cut(s) 321, 941, 1096
Bse1I ACTGG 4 cut(s) 854, 1312, 1640, 2390
Bse3DI GCAATG 6 cut(s) 48, 306, 418, 1847, 1865, 2040
Bse8I GATNNNNATC 1 cut(s) 2272
BseBI CCWGG 5 cut(s) 952, 1652, 1839, 2079, 2186
BseDI CCNNGG 7 cut(s) 120, 315, 1527, 1826, 2010, 2184, 2238
BseGI GGATG 5 cut(s) 468, 1090, 1647, 1660, 2285
BseJI GATNNNNATC 1 cut(s) 2272
BseLI CCNNNNNNNGG 3 cut(s) 321, 941, 1096
BseMI GCAATG 6 cut(s) 48, 306, 418, 1847, 1865, 2040
BseMII CTCAG 4 cut(s) 208, 244, 1028, 2339
BseNI ACTGG 4 cut(s) 854, 1312, 1640, 2390
BseYI CCCAGC 1 cut(s) 1334
BsgI GTGCAG 2 cut(s) 119, 2299
Bsh1236I CGCG 1 cut(s) 1844
BshFI GGCC 6 cut(s) 74, 314, 1175, 1646, 1935, 2444
BshNI GGYRCC 2 cut(s) 1818, 2458
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 2 cut(s) 489, 533
BslI CCNNNNNNNGG 3 cut(s) 321, 941, 1096
BsmBI CGTCTC 4 cut(s) 337, 573, 711, 1439
BsmI GAATGC 2 cut(s) 602, 2129
BsnI GGCC 6 cut(s) 74, 314, 1175, 1646, 1935, 2444
BsoBI CYCGRG 1 cut(s) 281
Bsp119I TTCGAA 2 cut(s) 33, 340
Bsp143I GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
Bsp1720I GCTNAGC 1 cut(s) 235
Bsp19I CCATGG 1 cut(s) 2238
BspACI CCGC 9 cut(s) 222, 311, 320, 572, 935, 967, 1415, 1844, 1901
BspANI GGCC 6 cut(s) 74, 314, 1175, 1646, 1935, 2444
BspCNI CTCAG 4 cut(s) 207, 243, 1029, 2340
BspFNI CGCG 1 cut(s) 1844
BspHI TCATGA 3 cut(s) 1045, 1260, 2436
BspLI GGNNCC 3 cut(s) 326, 1820, 2460
BspPI GGATC 1 cut(s) 111
BspT104I TTCGAA 2 cut(s) 33, 340
BspT107I GGYRCC 2 cut(s) 1818, 2458
BsrDI GCAATG 6 cut(s) 48, 306, 418, 1847, 1865, 2040
BsrI ACTGG 4 cut(s) 854, 1312, 1640, 2390
BssECI CCNNGG 7 cut(s) 120, 315, 1527, 1826, 2010, 2184, 2238
BssMI GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
BssT1I CCWWGG 5 cut(s) 120, 315, 1527, 1826, 2238
Bst2UI CCWGG 5 cut(s) 952, 1652, 1839, 2079, 2186
Bst4CI ACNGT 8 cut(s) 728, 827, 1280, 1787, 1818, 2050, 2074, 2280
Bst6I CTCTTC 3 cut(s) 371, 921, 1727
BstAPI GCANNNNNTGC 3 cut(s) 975, 2051, 2135
BstBI TTCGAA 2 cut(s) 33, 340
BstC8I GCNNGC 3 cut(s) 1389, 2105, 2387
BstDEI CTNAG 7 cut(s) 194, 230, 235, 708, 1037, 1687, 2348
BstDSI CCRYGG 1 cut(s) 2238
BstF5I GGATG 5 cut(s) 468, 1090, 1647, 1660, 2285
BstFNI CGCG 1 cut(s) 1844
BstHHI GCGC 1 cut(s) 1844
BstKTI GATC 6 cut(s) 119, 637, 1014, 1411, 1495, 2434
BstMBI GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
BstNI CCWGG 5 cut(s) 952, 1652, 1839, 2079, 2186
BstNSI RCATGY 2 cut(s) 759, 1812
BstSCI CCNGG 6 cut(s) 531, 950, 1650, 1837, 2077, 2184
BstSFI CTRYAG 2 cut(s) 144, 1382
BstUI CGCG 1 cut(s) 1844
BstV2I GAAGAC 1 cut(s) 2182
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BsuRI GGCC 6 cut(s) 74, 314, 1175, 1646, 1935, 2444
BtgI CCRYGG 1 cut(s) 2238
BtsCI GGATG 5 cut(s) 468, 1090, 1647, 1660, 2285
BtsIMutI CAGTG 4 cut(s) 1647, 1792, 2140, 2276
Cac8I GCNNGC 3 cut(s) 1389, 2105, 2387
CaiI CAGNNNCTG 1 cut(s) 2072
CciI TCATGA 3 cut(s) 1045, 1260, 2436
CfoI GCGC 1 cut(s) 1844
Cfr13I GGNCC 2 cut(s) 911, 2442
CseI GACGC 2 cut(s) 1046, 1751
Csp6I GTAC 7 cut(s) 290, 529, 903, 1281, 1819, 2075, 2459
CviQI GTAC 7 cut(s) 290, 529, 903, 1281, 1819, 2075, 2459
DdeI CTNAG 7 cut(s) 194, 230, 235, 708, 1037, 1687, 2348
DpnI GATC 6 cut(s) 118, 636, 1013, 1410, 1494, 2433
DpnII GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
DrdI GACNNNNNNGTC 1 cut(s) 1456
DseDI GACNNNNNNGTC 1 cut(s) 1456
EaeI YGGCCR 2 cut(s) 312, 1644
Eam1104I CTCTTC 3 cut(s) 371, 921, 1727
EarI CTCTTC 3 cut(s) 371, 921, 1727
Eco130I CCWWGG 5 cut(s) 120, 315, 1527, 1826, 2238
Eco147I AGGCCT 2 cut(s) 74, 1175
Eco32I GATATC 1 cut(s) 1043
Eco47I GGWCC 1 cut(s) 911
Eco57I CTGAAG 3 cut(s) 484, 1712, 2049
Eco88I CYCGRG 1 cut(s) 281
EcoRII CCWGG 5 cut(s) 950, 1650, 1837, 2077, 2184
EcoRV GATATC 1 cut(s) 1043
EcoT14I CCWWGG 5 cut(s) 120, 315, 1527, 1826, 2238
EcoT22I ATGCAT 2 cut(s) 604, 761
ErhI CCWWGG 5 cut(s) 120, 315, 1527, 1826, 2238
Esp3I CGTCTC 4 cut(s) 337, 573, 711, 1439
FalI AAGNNNNNCTT 2 cut(s) 687, 719
FauI CCCGC 1 cut(s) 313
FbaI TGATCA 2 cut(s) 1408, 1492
FblI GTMKAC 1 cut(s) 619
FokI GGATG 5 cut(s) 455, 1077, 1634, 1667, 2272
FspBI CTAG 7 cut(s) 173, 269, 584, 588, 1628, 2156, 2491
GlaI GCGC 1 cut(s) 1843
GsaI CCCAGC 1 cut(s) 1338
GsuI CTGGAG 1 cut(s) 934
HaeIII GGCC 6 cut(s) 74, 314, 1175, 1646, 1935, 2444
HapII CCGG 2 cut(s) 489, 533
HgaI GACGC 2 cut(s) 1046, 1751
HhaI GCGC 1 cut(s) 1844
Hin6I GCGC 1 cut(s) 1842
HinP1I GCGC 1 cut(s) 1842
HincII GTYRAC 3 cut(s) 620, 1276, 1660
HindII GTYRAC 3 cut(s) 620, 1276, 1660
HindIII AAGCTT 1 cut(s) 1389
HinfI GANTC 5 cut(s) 627, 931, 1661, 2015, 2089
HpaII CCGG 2 cut(s) 489, 533
HphI GGTGA 8 cut(s) 193, 365, 473, 503, 1109, 1386, 1566, 2134
Hpy166II GTNNAC 6 cut(s) 544, 620, 1276, 1660, 1717, 1814
Hpy188III TCNNGA 7 cut(s) 283, 1009, 1046, 1094, 1261, 2214, 2437
Hpy8I GTNNAC 6 cut(s) 544, 620, 1276, 1660, 1717, 1814
Hpy99I CGWCG 2 cut(s) 923, 926
HpyAV CCTTC 6 cut(s) 419, 482, 1165, 1772, 1979, 2149
HpyCH4III ACNGT 8 cut(s) 728, 827, 1280, 1787, 1818, 2050, 2074, 2280
HpyCH4IV ACGT 1 cut(s) 2396
HpyF3I CTNAG 7 cut(s) 194, 230, 235, 708, 1037, 1687, 2348
HpySE526I ACGT 1 cut(s) 2396
HspAI GCGC 1 cut(s) 1842
KpnI GGTACC 2 cut(s) 1822, 2462
Ksp22I TGATCA 2 cut(s) 1408, 1492
Kzo9I GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
LmnI GCTCC 4 cut(s) 324, 872, 954, 2469
LweI GCATC 5 cut(s) 965, 966, 1032, 1912, 2294
MaeI CTAG 7 cut(s) 173, 269, 584, 588, 1628, 2156, 2491
MaeII ACGT 1 cut(s) 2396
MaeIII GTNAC 6 cut(s) 386, 1572, 1603, 1781, 1907, 2392
MalI GATC 6 cut(s) 118, 636, 1013, 1410, 1494, 2433
MboI GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
MflI RGATCY 1 cut(s) 116
MlsI TGGCCA 1 cut(s) 1646
MluCI AATT 9 cut(s) 519, 1132, 1194, 1200, 1268, 1474, 1584, 1634, 2109
MluNI TGGCCA 1 cut(s) 1646
MlyI GAGTC 2 cut(s) 621, 1655
MmeI TCCRAC 1 cut(s) 1749
Mox20I TGGCCA 1 cut(s) 1646
Mph1103I ATGCAT 2 cut(s) 604, 761
MroXI GAANNNNTTC 1 cut(s) 767
MscI TGGCCA 1 cut(s) 1646
MseI TTAA 6 cut(s) 381, 800, 1028, 1422, 1583, 2261
Msp20I TGGCCA 1 cut(s) 1646
MspA1I CMGCKG 4 cut(s) 574, 615, 1338, 2416
MspI CCGG 2 cut(s) 489, 533
MspR9I CCNGG 6 cut(s) 533, 952, 1652, 1839, 2079, 2186
Mva1269I GAATGC 2 cut(s) 602, 2129
MvaI CCWGG 5 cut(s) 952, 1652, 1839, 2079, 2186
MvnI CGCG 1 cut(s) 1844
NciI CCSGG 1 cut(s) 533
NcoI CCATGG 1 cut(s) 2238
NdeII GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
NlaIV GGNNCC 3 cut(s) 326, 1820, 2460
NmuCI GTSAC 1 cut(s) 1572
NsiI ATGCAT 2 cut(s) 604, 761
NspI RCATGY 2 cut(s) 759, 1812
NspV TTCGAA 2 cut(s) 33, 340
PagI TCATGA 3 cut(s) 1045, 1260, 2436
PceI AGGCCT 2 cut(s) 74, 1175
PciI ACATGT 1 cut(s) 1808
PctI GAATGC 2 cut(s) 602, 2129
PdmI GAANNNNTTC 1 cut(s) 767
PfeI GAWTC 3 cut(s) 931, 2015, 2089
PfoI TCCNGGA 2 cut(s) 950, 1650
PleI GAGTC 2 cut(s) 621, 1655
PpsI GAGTC 2 cut(s) 621, 1655
PscI ACATGT 1 cut(s) 1808
PsiI TTATAA 1 cut(s) 1979
Psp6I CCWGG 5 cut(s) 950, 1650, 1837, 2077, 2184
PspFI CCCAGC 1 cut(s) 1334
PspGI CCWGG 5 cut(s) 950, 1650, 1837, 2077, 2184
PspN4I GGNNCC 3 cut(s) 326, 1820, 2460
PspPI GGNCC 2 cut(s) 911, 2442
PstNI CAGNNNCTG 1 cut(s) 2072
PsuI RGATCY 1 cut(s) 116
PvuII CAGCTG 3 cut(s) 615, 1338, 2416
RsaI GTAC 7 cut(s) 291, 530, 904, 1282, 1820, 2076, 2460
RsaNI GTAC 7 cut(s) 290, 529, 903, 1281, 1819, 2075, 2459
SalI GTCGAC 1 cut(s) 618
SaqAI TTAA 6 cut(s) 381, 800, 1028, 1422, 1583, 2261
Sau3AI GATC 6 cut(s) 116, 634, 1011, 1408, 1492, 2431
Sau96I GGNCC 2 cut(s) 911, 2442
SchI GAGTC 2 cut(s) 621, 1655
ScrFI CCNGG 6 cut(s) 533, 952, 1652, 1839, 2079, 2186
SfaNI GCATC 5 cut(s) 965, 966, 1032, 1912, 2294
SfcI CTRYAG 2 cut(s) 144, 1382
SfuI TTCGAA 2 cut(s) 33, 340
SinI GGWCC 1 cut(s) 911
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SpeI ACTAGT 1 cut(s) 2155
Sse9I AATT 9 cut(s) 519, 1132, 1194, 1200, 1268, 1474, 1584, 1634, 2109
SseBI AGGCCT 2 cut(s) 74, 1175
SsiI CCGC 9 cut(s) 222, 311, 320, 572, 935, 967, 1415, 1844, 1901
SspI AATATT 1 cut(s) 1953
SspMI CTAG 7 cut(s) 173, 269, 584, 588, 1628, 2156, 2491
StuI AGGCCT 2 cut(s) 74, 1175
StyD4I CCNGG 6 cut(s) 531, 950, 1650, 1837, 2077, 2184
StyI CCWWGG 5 cut(s) 120, 315, 1527, 1826, 2238
TaaI ACNGT 8 cut(s) 728, 827, 1280, 1787, 1818, 2050, 2074, 2280
TaiI ACGT 1 cut(s) 2399
TaqI TCGA 6 cut(s) 33, 340, 619, 672, 1300, 2215
TaqII GACCGA 1 cut(s) 171
TasI AATT 9 cut(s) 519, 1132, 1194, 1200, 1268, 1474, 1584, 1634, 2109
TauI GCSGC 4 cut(s) 314, 1418, 1847, 1903
TfiI GAWTC 3 cut(s) 931, 2015, 2089
Tru1I TTAA 6 cut(s) 381, 800, 1028, 1422, 1583, 2261
Tru9I TTAA 6 cut(s) 381, 800, 1028, 1422, 1583, 2261
TscAI CASTG 4 cut(s) 1647, 1792, 2140, 2283
TseFI GTSAC 1 cut(s) 1572
Tsp45I GTSAC 1 cut(s) 1572
TspGWI ACGGA 4 cut(s) 325, 735, 1050, 2482
TspRI CASTG 4 cut(s) 1647, 1792, 2140, 2283
VpaK11BI GGWCC 1 cut(s) 911
XapI RAATTY 2 cut(s) 1200, 1634
XceI RCATGY 2 cut(s) 759, 1812
XmiI GTMKAC 1 cut(s) 619
XmnI GAANNNNTTC 1 cut(s) 767
XspI CTAG 7 cut(s) 173, 269, 584, 588, 1628, 2156, 2491
Zsp2I ATGCAT 2 cut(s) 604, 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.