Rmu_co8467899.1_g000001

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8467899.1
OG0001790
Physical Location & Seq
Forward (+)
1 .. 1735
1735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8467899.1_g000001.1.cds

Sequence Viewer

Length: 989 bp
atgatagaggcaacacgcctctacatctagctgcttggctcgggaatgtacaagtgtgccacagcattgcagccaagggggggagcctcgtctcggttcgaaatgtggagggtgagacacctctcttcttggcagctcttaatggtaacacaaaggcttttctttgccttcatctccattgccaagaaaaaccccattcctctatcagagacaacaatggtgataccatccttcacgctgcaatctccggtgaatacttcagtggaaccgaagcctgcacccgaaatgggttctcggttcggttcgggttaaatgctttgaacccgaatgggttctccgtcactttggtcatttggtttcgattttttttgaacatctgtattcaacttcgatctccacaaatcgaagaaggcctgggatgggtgagaagtccggttggttcagaaataggtggaaccgaaacaaaacccgaacgggtctacggttcggttcgggtttcacgtcgtgaaaaatgtgaaaccgatataattcggttgtacccagaacttgtgaactctatcaatcaaaatggtttgtctccgctgcatgttctagctagtaagcccaatgcattcaaaagcagctgtcgacttggactctgtgatcttcttatatacaaatgtttgatggttgaagaactcaaagaggaagaatttaaccatgaagcgtgtctttctaaggcaggagacggagacagttcttcatacccagaaaactacgaaacatgcatgaacttcttccaagttttcagaagtttgtttcaagtgttaagtaaaaagaggggagataagaactgtatgcaagcgtggcgcgaatactggcataagaagcacagctccctctttcaagctaatggaggaaatggaaagggtactaatggtcctgccgacgacgaagagaatccgcaaaaaggtataacctcttctggaaacctttcgatgttgatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

328

Amino Acids

36.32

Weight (kDa)

7.22

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 479, 627
AccII CGCG 1 cut(s) 851
AciI CCGC 2 cut(s) 580, 943
AcsI RAATTY 1 cut(s) 691
AcuI CTGAAG 1 cut(s) 243
AdeI CACNNNGTG 1 cut(s) 505
AfaI GTAC 3 cut(s) 50, 538, 912
AfiI CCNNNNNNNGG 5 cut(s) 80, 93, 287, 420, 949
AgsI TTSAA 7 cut(s) 321, 372, 385, 615, 673, 802, 886
AjiI CACGTC 1 cut(s) 502
AjnI CCWGG 1 cut(s) 413
AluBI AGCT 6 cut(s) 31, 136, 595, 623, 875, 889
AluI AGCT 6 cut(s) 31, 136, 595, 623, 875, 889
Alw26I GTCTC 6 cut(s) 96, 109, 203, 581, 719, 725
Ama87I CYCGRG 1 cut(s) 40
AoxI GGCC 1 cut(s) 411
ApeKI GCWGC 6 cut(s) 31, 70, 133, 238, 582, 620
ApoI RAATTY 1 cut(s) 691
Asp700I GAANNNNTTC 3 cut(s) 331, 775, 972
AspLEI GCGC 1 cut(s) 851
AspS9I GGNCC 1 cut(s) 919
AsuHPI GGTGA 4 cut(s) 124, 232, 262, 435
AsuII TTCGAA 1 cut(s) 99
AvaI CYCGRG 1 cut(s) 40
AvaII GGWCC 1 cut(s) 919
BarI GAAGNNNNNNTAC 2 cut(s) 945, 977
BbvI GCAGC 6 cut(s) 18, 82, 145, 225, 569, 632
BccI CCATC 3 cut(s) 235, 413, 660
BciT130I CCWGG 1 cut(s) 415
BcoDI GTCTC 6 cut(s) 96, 109, 203, 581, 719, 725
BfaI CTAG 3 cut(s) 28, 592, 596
BisI GCNGC 6 cut(s) 32, 71, 134, 239, 583, 621
BlsI GCNGC 6 cut(s) 33, 72, 135, 240, 584, 622
Bme1390I CCNGG 1 cut(s) 415
Bme18I GGWCC 1 cut(s) 919
BmeT110I CYCGRG 1 cut(s) 40
BmgBI CACGTC 1 cut(s) 502
BmgT120I GGNCC 1 cut(s) 919
BmiI GGNNCC 3 cut(s) 85, 267, 456
BmrFI CCNGG 1 cut(s) 415
Bpu14I TTCGAA 1 cut(s) 99
BsaJI CCNNGG 2 cut(s) 74, 414
BsaWI WCCGGW 2 cut(s) 247, 432
Bsc4I CCNNNNNNNGG 5 cut(s) 80, 93, 287, 420, 949
Bse1I ACTGG 1 cut(s) 862
Bse3DI GCAATG 2 cut(s) 65, 177
BseBI CCWGG 1 cut(s) 415
BseDI CCNNGG 2 cut(s) 74, 414
BseGI GGATG 2 cut(s) 227, 424
BseLI CCNNNNNNNGG 5 cut(s) 80, 93, 287, 420, 949
BseMI GCAATG 2 cut(s) 65, 177
BseNI ACTGG 1 cut(s) 862
BseXI GCAGC 6 cut(s) 18, 82, 145, 225, 569, 632
BsgI GTGCAG 1 cut(s) 261
Bsh1236I CGCG 1 cut(s) 851
BshFI GGCC 1 cut(s) 413
BsiHKCI CYCGRG 1 cut(s) 40
BsiSI CCGG 2 cut(s) 248, 433
BslI CCNNNNNNNGG 5 cut(s) 80, 93, 287, 420, 949
BsmAI GTCTC 6 cut(s) 96, 109, 203, 581, 719, 725
BsmBI CGTCTC 2 cut(s) 96, 719
BsmI GAATGC 1 cut(s) 610
BsnI GGCC 1 cut(s) 413
BsoBI CYCGRG 1 cut(s) 40
Bsp119I TTCGAA 1 cut(s) 99
Bsp1407I TGTACA 1 cut(s) 48
Bsp143I GATC 2 cut(s) 391, 642
BspACI CCGC 2 cut(s) 580, 943
BspANI GGCC 1 cut(s) 413
BspFNI CGCG 1 cut(s) 851
BspLI GGNNCC 3 cut(s) 85, 267, 456
BspT104I TTCGAA 1 cut(s) 99
BsrDI GCAATG 2 cut(s) 65, 177
BsrGI TGTACA 1 cut(s) 48
BsrI ACTGG 1 cut(s) 862
BssECI CCNNGG 2 cut(s) 74, 414
BssMI GATC 2 cut(s) 391, 642
BssT1I CCWWGG 1 cut(s) 74
Bst2UI CCWGG 1 cut(s) 415
Bst4CI ACNGT 3 cut(s) 484, 736, 835
Bst6I CTCTTC 3 cut(s) 130, 929, 966
BstAUI TGTACA 1 cut(s) 48
BstBI TTCGAA 1 cut(s) 99
BstC8I GCNNGC 2 cut(s) 276, 842
BstDEI CTNAG 1 cut(s) 716
BstF5I GGATG 2 cut(s) 227, 424
BstFNI CGCG 1 cut(s) 851
BstHHI GCGC 1 cut(s) 851
BstKTI GATC 2 cut(s) 394, 645
BstMAI GTCTC 6 cut(s) 96, 109, 203, 581, 719, 725
BstMBI GATC 2 cut(s) 391, 642
BstMWI GCNNNNNNNGC 2 cut(s) 846, 867
BstNI CCWGG 1 cut(s) 415
BstNSI RCATGY 2 cut(s) 589, 767
BstSCI CCNGG 1 cut(s) 413
BstUI CGCG 1 cut(s) 851
BstV1I GCAGC 6 cut(s) 18, 82, 145, 225, 569, 632
BsuRI GGCC 1 cut(s) 413
BtrI CACGTC 1 cut(s) 502
BtsCI GGATG 2 cut(s) 227, 424
BtsIMutI CAGTG 1 cut(s) 267
Cac8I GCNNGC 2 cut(s) 276, 842
CfoI GCGC 1 cut(s) 851
Cfr13I GGNCC 1 cut(s) 919
Csp6I GTAC 3 cut(s) 49, 537, 911
CviAII CATG 4 cut(s) 586, 700, 764, 768
CviQI GTAC 3 cut(s) 49, 537, 911
DdeI CTNAG 1 cut(s) 716
DpnI GATC 2 cut(s) 393, 644
DpnII GATC 2 cut(s) 391, 642
DraIII CACNNNGTG 1 cut(s) 505
Eam1104I CTCTTC 3 cut(s) 130, 929, 966
EarI CTCTTC 3 cut(s) 130, 929, 966
Eco130I CCWWGG 1 cut(s) 74
Eco147I AGGCCT 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 919
Eco57I CTGAAG 1 cut(s) 243
Eco88I CYCGRG 1 cut(s) 40
EcoRII CCWGG 1 cut(s) 413
EcoT14I CCWWGG 1 cut(s) 74
EcoT22I ATGCAT 2 cut(s) 612, 769
ErhI CCWWGG 1 cut(s) 74
Esp3I CGTCTC 2 cut(s) 96, 719
FaeI CATG 4 cut(s) 589, 703, 767, 771
FalI AAGNNNNNCTT 2 cut(s) 695, 727
FatI CATG 4 cut(s) 585, 699, 763, 767
FblI GTMKAC 2 cut(s) 479, 627
Fnu4HI GCNGC 6 cut(s) 32, 71, 134, 239, 583, 621
FokI GGATG 2 cut(s) 214, 431
Fsp4HI GCNGC 6 cut(s) 32, 71, 134, 239, 583, 621
FspBI CTAG 3 cut(s) 28, 592, 596
GlaI GCGC 1 cut(s) 850
GluI GCNGC 6 cut(s) 32, 71, 134, 239, 583, 621
HaeIII GGCC 1 cut(s) 413
HapII CCGG 2 cut(s) 248, 433
HhaI GCGC 1 cut(s) 851
Hin1II CATG 4 cut(s) 589, 703, 767, 771
Hin6I GCGC 1 cut(s) 849
HinP1I GCGC 1 cut(s) 849
HincII GTYRAC 1 cut(s) 628
HindII GTYRAC 1 cut(s) 628
HinfI GANTC 2 cut(s) 635, 939
HpaII CCGG 2 cut(s) 248, 433
HphI GGTGA 4 cut(s) 124, 232, 262, 435
Hpy166II GTNNAC 3 cut(s) 480, 552, 628
Hpy188I TCNGA 3 cut(s) 208, 444, 790
Hpy188III TCNNGA 3 cut(s) 42, 505, 965
Hpy8I GTNNAC 3 cut(s) 480, 552, 628
Hpy99I CGWCG 3 cut(s) 506, 931, 934
HpyAV CCTTC 3 cut(s) 178, 241, 403
HpyCH4III ACNGT 3 cut(s) 484, 736, 835
HpyCH4IV ACGT 1 cut(s) 501
HpyCH4V TGCA 7 cut(s) 70, 241, 278, 585, 610, 767, 840
HpyF10VI GCNNNNNNNGC 2 cut(s) 846, 867
HpyF3I CTNAG 1 cut(s) 716
HpySE526I ACGT 1 cut(s) 501
Hsp92II CATG 4 cut(s) 589, 703, 767, 771
HspAI GCGC 1 cut(s) 849
Kzo9I GATC 2 cut(s) 391, 642
LmnI GCTCC 2 cut(s) 83, 880
Lsp1109I GCAGC 6 cut(s) 18, 82, 145, 225, 569, 632
MaeI CTAG 3 cut(s) 28, 592, 596
MaeII ACGT 1 cut(s) 501
MaeIII GTNAC 2 cut(s) 145, 339
MalI GATC 2 cut(s) 393, 644
MboI GATC 2 cut(s) 391, 642
MboII GAAGA 9 cut(s) 117, 418, 637, 685, 700, 731, 768, 946, 953
MluCI AATT 2 cut(s) 527, 691
MlyI GAGTC 1 cut(s) 629
Mph1103I ATGCAT 2 cut(s) 612, 769
MroXI GAANNNNTTC 3 cut(s) 331, 775, 972
MseI TTAA 4 cut(s) 140, 310, 695, 808
MspA1I CMGCKG 2 cut(s) 582, 623
MspI CCGG 2 cut(s) 248, 433
MspR9I CCNGG 1 cut(s) 415
Mva1269I GAATGC 1 cut(s) 610
MvaI CCWGG 1 cut(s) 415
MvnI CGCG 1 cut(s) 851
MwoI GCNNNNNNNGC 2 cut(s) 846, 867
NdeII GATC 2 cut(s) 391, 642
NlaIII CATG 4 cut(s) 589, 703, 767, 771
NlaIV GGNNCC 3 cut(s) 85, 267, 456
NmuCI GTSAC 1 cut(s) 339
NsiI ATGCAT 2 cut(s) 612, 769
NspI RCATGY 2 cut(s) 589, 767
NspV TTCGAA 1 cut(s) 99
PceI AGGCCT 1 cut(s) 413
PcsI WCGNNNNNNNCGW 1 cut(s) 498
PctI GAATGC 1 cut(s) 610
PdmI GAANNNNTTC 3 cut(s) 331, 775, 972
PfeI GAWTC 1 cut(s) 939
PkrI GCNGC 6 cut(s) 33, 72, 135, 240, 584, 622
PleI GAGTC 1 cut(s) 629
PpsI GAGTC 1 cut(s) 629
Psp6I CCWGG 1 cut(s) 413
PspGI CCWGG 1 cut(s) 413
PspN4I GGNNCC 3 cut(s) 85, 267, 456
PspPI GGNCC 1 cut(s) 919
PvuII CAGCTG 1 cut(s) 623
RsaI GTAC 3 cut(s) 50, 538, 912
RsaNI GTAC 3 cut(s) 49, 537, 911
SalI GTCGAC 1 cut(s) 626
SaqAI TTAA 4 cut(s) 140, 310, 695, 808
SatI GCNGC 6 cut(s) 32, 71, 134, 239, 583, 621
Sau3AI GATC 2 cut(s) 391, 642
Sau96I GGNCC 1 cut(s) 919
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 1 cut(s) 415
SfuI TTCGAA 1 cut(s) 99
SinI GGWCC 1 cut(s) 919
Sse9I AATT 2 cut(s) 527, 691
SseBI AGGCCT 1 cut(s) 413
SsiI CCGC 2 cut(s) 580, 943
SspMI CTAG 3 cut(s) 28, 592, 596
StuI AGGCCT 1 cut(s) 413
StyD4I CCNGG 1 cut(s) 413
StyI CCWWGG 1 cut(s) 74
TaaI ACNGT 3 cut(s) 484, 736, 835
TaiI ACGT 1 cut(s) 504
TaqI TCGA 6 cut(s) 99, 360, 390, 404, 627, 976
TasI AATT 2 cut(s) 527, 691
TatI WGTACW 1 cut(s) 48
TfiI GAWTC 1 cut(s) 939
Tru1I TTAA 4 cut(s) 140, 310, 695, 808
Tru9I TTAA 4 cut(s) 140, 310, 695, 808
TscAI CASTG 1 cut(s) 267
TseFI GTSAC 1 cut(s) 339
TseI GCWGC 6 cut(s) 31, 70, 133, 238, 582, 620
Tsp45I GTSAC 1 cut(s) 339
TspDTI ATGAA 4 cut(s) 160, 716, 731, 784
TspGWI ACGGA 2 cut(s) 327, 743
TspRI CASTG 1 cut(s) 267
VpaK11BI GGWCC 1 cut(s) 919
XapI RAATTY 1 cut(s) 691
XceI RCATGY 2 cut(s) 589, 767
XmiI GTMKAC 2 cut(s) 479, 627
XmnI GAANNNNTTC 3 cut(s) 331, 775, 972
XspI CTAG 3 cut(s) 28, 592, 596
Zsp2I ATGCAT 2 cut(s) 612, 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.